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Row Type | Variable Name | Attribute Name | Data Type | Value |
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attribute | NC_GLOBAL | access_formats | String | .htmlTable,.csv,.json,.mat,.nc,.tsv |
attribute | NC_GLOBAL | acquisition_description | String | In April 2012, we collected 100 adult oysters (80-100 mm shell length) from\n3-5 separate reefs at each of 6 sites: St. Augustine, FL (FL-1; 30.0224,\n-81.3287), Jacksonville, FL (FL-2; 30.4446, -81.4199), Sapelo Island, GA\n(GA/SC-1; 31.4777, -81.2726), Ace Basin, SC (GA/SC-2; 32.4846, -80.6001),\nMasonboro, NC (NC-1; 34.1510, -77.8551), and Middle Marsh, NC (NC-2; 34.6951,\n-76.6183). They were held in flowing seawater tanks or suspended in cages from\ndocks in their home region for 2-3 weeks until 30 oysters from each site could\nbe tested and certified as disease free. The remaining 70 oysters were then\nshipped on ice to a single hatchery facility in Florida (Research Aquaculture\nInc., Tequesta, FL; 26.9607, -80.0931) at the end of April.\n \nThe adult oysters from each site were used as the broodstock to produce 6\nseparate site-specific \\\"cohorts\\\" (one cohort per site). From their arrival\nat the hatchery, the adult oysters were held for 2 weeks until they were ready\nto spawn under the same conditions in separate flow-through seawater systems\nto prevent cross-contamination. All families were manually spawned (i.e.,\nstrip spawned) on May 7 (see details below). Because the original FL-1 family\ndid not produce many offspring, the remaining broodstock oysters from this\nsite were spawned on June 1 using the same process. Due to variation in\nripeness and sex, the number of oysters spawned and the ratio of males to\nfemales varied across broodstock (Table 1 of Hughes et al., 2019), though our\nbroodstock numbers for each cohort are comparable to those commonly used in\nhatchery settings (30-60 individuals; Morvezen et al. 2016).\n \nThe broodstock oysters from each source site were strip spawned, sexed, and\nfertilized on the same day by a team of 7 people, who each had a specific job\nto perform: shucking the animals, sampling and preparing tissue for\nmicroscopic analysis of sex, identifying the sex, stripping the male sperm,\nstripping the female eggs, mixing the sperm and eggs after all of the animals\nfrom a particular source were stripped, overseeing the process and keeping\ntrack of broodstock source. We sanitized equipment between individuals and\nagain between broodstock sources. Stripping was done by broodstock source\nindependently and quickly so that the sperm and eggs would remain viable, and\nall viable sperm and eggs were used. During the gamete mixing process, the\neggs from all females and the sperm from all males were first pre-mixed and\nthen combined to ensure equal access of gametes to one another. We allowed\n30-60 minutes for fertilization; once 75-90% of the eggs were fertilized, they\nwere moved to larval tanks. All larvae were retained except for minimal\nnumbers of individuals in each cohort that did not grow or had improper\ndevelopment. Larval culture occurred in 60-gallon conical tanks utilizing a\nflow-through seawater system with Banjo screens that is commercially used in\nmultiple bivalve hatcheries (e.g., Taylor Shellfish in WA; Cherrystones in\nVA).\n \nOver a period of 3 days the week of May 28, oysters were sieved on a\n250-micron sieve and settled on crushed oyster cultch in a recirculating flow-\nthrough system. The week of June 11, once they reached 800 microns in size,\nthey were moved into a nursery facility compliant with state regulations,\nagain under flow-through seawater conditions (salinity = 32 ppt, temperature =\n30\\u00baC). In the hatchery and nursery stages, the oysters were fed a mixed\ndiet of T. isochrysis, Chaetocerous gracilis, and Tetraselmis via a constantly\nrunning peristaltic pump. Although growth was similar during the larval\nculture phase, some cohorts produced more juvenile oysters (\\\"spat\\\") than\nothers during settlement, despite following the same procedures for all. To\nmaintain consistency in their growing conditions, we selected a random sample\nof each cohort to yield similar total abundances across cohorts on June 18. At\nthe end of June (June 27) at approximately 4mm in size, the 6 cohorts were\ntransferred to a common flow-through facility at the Whitney Marine Biological\nLaboratory in St. Augustine, FL. To assess genetic diversity within and\nbetween oyster cohorts produced in the hatchery, 50 individuals were\nhaphazardly collected from each juvenile cohort prior to the start of the\nfield experiments and preserved at -80\\u1d52C for genetic analysis. This\nsample size is sufficient to estimate allele frequencies accurately (Hale et\nal. 2012).\n \nTo extract DNA, we ground each tissue sample with a pestle, and used the\ntissue centrifugation protocol from the Omega Bio-Tek E-Z 96 Tissue DNA Kit.\nWe determined genetic diversity and population structure using 12 highly\nvariable microsatellite loci developed for C. virginica: Cvi9, Cvi11, and\nCvi13 from Brown et al. (2000); Cvi1i24b, Cvi2i23, Cvi2j24, and Cvi2k14 from\nReece et al. (2004); Cvi4313E-VIMS from Carlsson and Reece (2007); and RUCV1,\nRUCV66, RUCV73, and RUCV74 from Wang and Guo (2007). We amplified four loci in\neach multiplexed polymerase chain reaction (PCR) using the Qiagen Type-It\nMicrosatellite PCR Kit. Each 10 l reaction consisted of 1 l DNA template, 5 l\n2X type-it multiplex master mix (Qiagen), 2.4 l water, and 0.2 l each 10 M\nprimer. Using a T100 thermal cycler (Bio-Rad), PCR cycling conditions included\ninitial activation/denaturation at 95\\u1d52C for 5 min, followed by 28 cycles\nof 95\\u1d52C for 30 sec, 60\\u1d52C for 90 sec, and 72\\u1d52C for 30 sec, and\nfinal extension at 60\\u1d52C for 30 min. PCR products were separated on a\n3730xl Genetic Analyzer (Applied Biosystems) with the internal size standard\nGeneScan 500 LIZ (Applied Biosystems), and fragment analysis was performed\nusing GeneMarker version 2.6 (SoftGenetics).\n \nWe created panels for each multiplexed reaction in GeneMarker, which included\nbins that were assigned manually for all alleles; the same panels were used to\nscore all samples, and the alignment of the panels was checked prior to each\nanalysis to account for any run-to-run variation and to identify any new\nalleles. We used these panels to do a preliminary first assignment of alleles\nbased on peak position and bin position, but every sample was then scored\nmanually for all loci to examine signal intensity, to confirm the\npresence/absence of alleles, and to identify any reruns. A subset of samples\nwas then rerun (at least 15% per multiplex PCR reaction) and manually scored\nagain to confirm any uncertain allele calls and account for any genotyping\nerror. |
attribute | NC_GLOBAL | awards_0_award_nid | String | 709941 |
attribute | NC_GLOBAL | awards_0_award_number | String | OCE-1652320 |
attribute | NC_GLOBAL | awards_0_data_url | String | http://www.nsf.gov/awardsearch/showAward.do?AwardNumber=1652320 |
attribute | NC_GLOBAL | awards_0_funder_name | String | NSF Division of Ocean Sciences |
attribute | NC_GLOBAL | awards_0_funding_acronym | String | NSF OCE |
attribute | NC_GLOBAL | awards_0_funding_source_nid | String | 355 |
attribute | NC_GLOBAL | awards_0_program_manager | String | Michael E. Sieracki |
attribute | NC_GLOBAL | awards_0_program_manager_nid | String | 50446 |
attribute | NC_GLOBAL | cdm_data_type | String | Other |
attribute | NC_GLOBAL | comment | String | Oyster Cohort Genetics \n PI: Randall Hughes \n Version date: 06-June-2019 |
attribute | NC_GLOBAL | Conventions | String | COARDS, CF-1.6, ACDD-1.3 |
attribute | NC_GLOBAL | creator_email | String | info at bco-dmo.org |
attribute | NC_GLOBAL | creator_name | String | BCO-DMO |
attribute | NC_GLOBAL | creator_type | String | institution |
attribute | NC_GLOBAL | creator_url | String | https://www.bco-dmo.org/ |
attribute | NC_GLOBAL | data_source | String | extract_data_as_tsv version 2.3 19 Dec 2019 |
attribute | NC_GLOBAL | date_created | String | 2019-06-06T18:01:48Z |
attribute | NC_GLOBAL | date_modified | String | 2019-06-11T18:39:33Z |
attribute | NC_GLOBAL | defaultDataQuery | String | &time<now |
attribute | NC_GLOBAL | doi | String | 10.1575/1912/bco-dmo.769969.1 |
attribute | NC_GLOBAL | infoUrl | String | https://www.bco-dmo.org/dataset/769969 |
attribute | NC_GLOBAL | institution | String | BCO-DMO |
attribute | NC_GLOBAL | instruments_0_acronym | String | Automated Sequencer |
attribute | NC_GLOBAL | instruments_0_dataset_instrument_nid | String | 770021 |
attribute | NC_GLOBAL | instruments_0_description | String | General term for a laboratory instrument used for deciphering the order of bases in a strand of DNA. Sanger sequencers detect fluorescence from different dyes that are used to identify the A, C, G, and T extension reactions. Contemporary or Pyrosequencer methods are based on detecting the activity of DNA polymerase (a DNA synthesizing enzyme) with another chemoluminescent enzyme. Essentially, the method allows sequencing of a single strand of DNA by synthesizing the complementary strand along it, one base pair at a time, and detecting which base was actually added at each step. |
attribute | NC_GLOBAL | instruments_0_instrument_name | String | Automated DNA Sequencer |
attribute | NC_GLOBAL | instruments_0_instrument_nid | String | 649 |
attribute | NC_GLOBAL | instruments_0_supplied_name | String | 3730xl Genetic Analyzer (Applied Biosystems) |
attribute | NC_GLOBAL | instruments_1_acronym | String | Thermal Cycler |
attribute | NC_GLOBAL | instruments_1_dataset_instrument_nid | String | 770020 |
attribute | NC_GLOBAL | instruments_1_description | String | General term for a laboratory apparatus commonly used for performing polymerase chain reaction (PCR). The device has a thermal block with holes where tubes with the PCR reaction mixtures can be inserted. The cycler then raises and lowers the temperature of the block in discrete, pre-programmed steps.\n\n(adapted from http://serc.carleton.edu/microbelife/research_methods/genomics/pcr.html) |
attribute | NC_GLOBAL | instruments_1_instrument_name | String | PCR Thermal Cycler |
attribute | NC_GLOBAL | instruments_1_instrument_nid | String | 471582 |
attribute | NC_GLOBAL | instruments_1_supplied_name | String | T100 thermal cycler (Bio-Rad) |
attribute | NC_GLOBAL | keywords | String | bco, bco-dmo, biological, chemical, cvi11, Cvi11_a, Cvi11_b, cvi13, Cvi13_a, Cvi13_b, cvi1i24b, Cvi1i24b_a, Cvi1i24b_b, cvi2i23, Cvi2i23_a, Cvi2i23_b, cvi2j24, Cvi2j24_a, Cvi2j24_b, cvi2k14, Cvi2k14_a, Cvi2k14_b, cvi4313, Cvi4313E_a, Cvi4313E_b, cvi9, Cvi9_a, Cvi9_b, data, dataset, dmo, erddap, management, oceanography, office, population, preliminary, rucv1, RUCV1_a, RUCV1_b, rucv66, RUCV66_a, RUCV66_b, rucv73, RUCV73_a, RUCV73_b, rucv74, RUCV74_a, RUCV74_b, sample, SAMPLE_ID, study |
attribute | NC_GLOBAL | license | String | https://www.bco-dmo.org/dataset/769969/license |
attribute | NC_GLOBAL | metadata_source | String | https://www.bco-dmo.org/api/dataset/769969 |
attribute | NC_GLOBAL | param_mapping | String | {'769969': {}} |
attribute | NC_GLOBAL | parameter_source | String | https://www.bco-dmo.org/mapserver/dataset/769969/parameters |
attribute | NC_GLOBAL | people_0_affiliation | String | Northeastern University |
attribute | NC_GLOBAL | people_0_affiliation_acronym | String | NEU |
attribute | NC_GLOBAL | people_0_person_name | String | A. Randall Hughes |
attribute | NC_GLOBAL | people_0_person_nid | String | 522929 |
attribute | NC_GLOBAL | people_0_role | String | Principal Investigator |
attribute | NC_GLOBAL | people_0_role_type | String | originator |
attribute | NC_GLOBAL | people_1_affiliation | String | Woods Hole Oceanographic Institution |
attribute | NC_GLOBAL | people_1_affiliation_acronym | String | WHOI BCO-DMO |
attribute | NC_GLOBAL | people_1_person_name | String | Shannon Rauch |
attribute | NC_GLOBAL | people_1_person_nid | String | 51498 |
attribute | NC_GLOBAL | people_1_role | String | Data Manager |
attribute | NC_GLOBAL | people_1_role_type | String | related |
attribute | NC_GLOBAL | project | String | Seagrass and Oyster Ecosystems |
attribute | NC_GLOBAL | projects_0_acronym | String | Seagrass and Oyster Ecosystems |
attribute | NC_GLOBAL | projects_0_description | String | NSF Award Abstract:\nDisease outbreaks in the ocean are increasing, causing losses of ecologically important marine species, but the factors contributing to these outbreaks are not well understood. This 5-year CAREER project will study disease prevalence and intensity in two marine foundation species - the seagrass Zostera marina and the Eastern oyster Crassostrea virginica. More specifically, host-disease relationships will be explored to understand how genetic diversity and population density of the host species impacts disease transmission and risk. This work will pair large-scale experimental restorations and smaller-scale field experiments to examine disease-host relationships across multiple spatial scales. Comparisons of patterns and mechanisms across the two coastal systems will provide an important first step towards identifying generalities in the diversity-density-disease relationship. To enhance the broader impacts and utility of this work, the experiments will be conducted in collaboration with restoration practitioners and guided by knowledge ascertained from key stakeholder groups. The project will support the development of an early career female researcher and multiple graduate and undergraduate students. Students will be trained in state-of-the-art molecular techniques to quantify oyster and seagrass parasites. Key findings from the surveys and experimental work will be incorporated into undergraduate courses focused on Conservation Biology, Marine Biology, and Disease Ecology. Finally, students in these courses will help develop social-ecological surveys and mutual learning games to stimulate knowledge transfer with stakeholders through a series of workshops.\nThe relationship between host genetic diversity and disease dynamics is complex. In some cases, known as a dilution effect, diversity reduces disease transmission and risk. However, the opposite relationship, known as the amplification effect, can also occur when diversity increases the risk of infection. Even if diversity directly reduces disease risk, simultaneous positive effects of diversity on host density could lead to amplification by increasing disease transmission between infected and uninfected individuals. Large-scale field restorations of seagrasses (Zostera marina) and oysters (Crassostrea virginica) will be utilized to test the effects of host genetic diversity on host population density and disease prevalence/intensity. Additional field experiments independently manipulating host genetic diversity and density will examine the mechanisms leading to dilution or amplification. Conducting similar manipulations in two marine foundation species - one a clonal plant and the other a non-clonal animal - will help identify commonalities in the diversity-density-disease relationship. Further, collaborations among project scientists, students, and stakeholders will enhance interdisciplinary training and help facilitate the exchange of information to improve management and restoration efforts. As part of these efforts, targeted surveys will be used to document the perceptions and attitudes of managers and restoration practitioners regarding genetic diversity and its role in ecological resilience and restoration. |
attribute | NC_GLOBAL | projects_0_end_date | String | 2022-01 |
attribute | NC_GLOBAL | projects_0_geolocation | String | Coastal New England |
attribute | NC_GLOBAL | projects_0_name | String | CAREER: Linking genetic diversity, population density, and disease prevalence in seagrass and oyster ecosystems |
attribute | NC_GLOBAL | projects_0_project_nid | String | 709942 |
attribute | NC_GLOBAL | projects_0_start_date | String | 2017-02 |
attribute | NC_GLOBAL | publisher_name | String | Biological and Chemical Oceanographic Data Management Office (BCO-DMO) |
attribute | NC_GLOBAL | publisher_type | String | institution |
attribute | NC_GLOBAL | sourceUrl | String | (local files) |
attribute | NC_GLOBAL | standard_name_vocabulary | String | CF Standard Name Table v55 |
attribute | NC_GLOBAL | summary | String | DNA microsatellite alleles for hatchery-produced oyster cohorts. |
attribute | NC_GLOBAL | title | String | [Oyster Cohort Genetics] - DNA microsatellite alleles for hatchery-produced oyster cohorts (CAREER: Linking genetic diversity, population density, and disease prevalence in seagrass and oyster ecosystems) |
attribute | NC_GLOBAL | version | String | 1 |
attribute | NC_GLOBAL | xml_source | String | osprey2erddap.update_xml() v1.3 |
variable | STUDY | String | ||
attribute | STUDY | bcodmo_name | String | sample |
attribute | STUDY | description | String | unique identifier for the 3 components of this dataset |
attribute | STUDY | long_name | String | STUDY |
attribute | STUDY | nerc_identifier | String | https://vocab.nerc.ac.uk/collection/P02/current/ACYC/ |
attribute | STUDY | units | String | unitless |
variable | POPULATION | String | ||
attribute | POPULATION | bcodmo_name | String | sample |
attribute | POPULATION | description | String | unique identifier for the site/populations sampled |
attribute | POPULATION | long_name | String | POPULATION |
attribute | POPULATION | nerc_identifier | String | https://vocab.nerc.ac.uk/collection/P02/current/ACYC/ |
attribute | POPULATION | units | String | unitless |
variable | SAMPLE_ID | String | ||
attribute | SAMPLE_ID | bcodmo_name | String | sample |
attribute | SAMPLE_ID | description | String | unique identifier for each individual in this dataset |
attribute | SAMPLE_ID | long_name | String | SAMPLE ID |
attribute | SAMPLE_ID | nerc_identifier | String | https://vocab.nerc.ac.uk/collection/P02/current/ACYC/ |
attribute | SAMPLE_ID | units | String | unitless |
variable | Cvi4313E_a | short | ||
attribute | Cvi4313E_a | _FillValue | short | 32767 |
attribute | Cvi4313E_a | actual_range | short | 0, 282 |
attribute | Cvi4313E_a | bcodmo_name | String | count |
attribute | Cvi4313E_a | description | String | allele 1 for locus Cvi4313E |
attribute | Cvi4313E_a | long_name | String | Cvi4313 E A |
attribute | Cvi4313E_a | units | String | bp (base pairs) |
variable | Cvi4313E_b | short | ||
attribute | Cvi4313E_b | _FillValue | short | 32767 |
attribute | Cvi4313E_b | actual_range | short | 0, 335 |
attribute | Cvi4313E_b | bcodmo_name | String | count |
attribute | Cvi4313E_b | description | String | allele 2 for locus Cvi4313E |
attribute | Cvi4313E_b | long_name | String | Cvi4313 E B |
attribute | Cvi4313E_b | units | String | bp (base pairs) |
variable | RUCV73_a | short | ||
attribute | RUCV73_a | _FillValue | short | 32767 |
attribute | RUCV73_a | actual_range | short | 0, 477 |
attribute | RUCV73_a | bcodmo_name | String | count |
attribute | RUCV73_a | description | String | allele 1 for locus RUCV73 |
attribute | RUCV73_a | long_name | String | RUCV73 A |
attribute | RUCV73_a | units | String | bp (base pairs) |
variable | RUCV73_b | short | ||
attribute | RUCV73_b | _FillValue | short | 32767 |
attribute | RUCV73_b | actual_range | short | 0, 481 |
attribute | RUCV73_b | bcodmo_name | String | count |
attribute | RUCV73_b | description | String | allele 2 for locus RUCV73 |
attribute | RUCV73_b | long_name | String | RUCV73 B |
attribute | RUCV73_b | units | String | bp (base pairs) |
variable | RUCV74_a | short | ||
attribute | RUCV74_a | _FillValue | short | 32767 |
attribute | RUCV74_a | actual_range | short | 0, 168 |
attribute | RUCV74_a | bcodmo_name | String | count |
attribute | RUCV74_a | description | String | allele 1 for locus RUCV74 |
attribute | RUCV74_a | long_name | String | RUCV74 A |
attribute | RUCV74_a | units | String | bp (base pairs) |
variable | RUCV74_b | short | ||
attribute | RUCV74_b | _FillValue | short | 32767 |
attribute | RUCV74_b | actual_range | short | 0, 171 |
attribute | RUCV74_b | bcodmo_name | String | count |
attribute | RUCV74_b | description | String | allele 2 for locus RUCV74 |
attribute | RUCV74_b | long_name | String | RUCV74 B |
attribute | RUCV74_b | units | String | bp (base pairs) |
variable | Cvi1i24b_a | short | ||
attribute | Cvi1i24b_a | _FillValue | short | 32767 |
attribute | Cvi1i24b_a | actual_range | short | 0, 157 |
attribute | Cvi1i24b_a | bcodmo_name | String | count |
attribute | Cvi1i24b_a | description | String | allele 1 for locus Cvi1i24b |
attribute | Cvi1i24b_a | long_name | String | Cvi1i24b A |
attribute | Cvi1i24b_a | units | String | bp (base pairs) |
variable | Cvi1i24b_b | short | ||
attribute | Cvi1i24b_b | _FillValue | short | 32767 |
attribute | Cvi1i24b_b | actual_range | short | 0, 157 |
attribute | Cvi1i24b_b | bcodmo_name | String | count |
attribute | Cvi1i24b_b | description | String | allele 2 for locus Cvi1i24b |
attribute | Cvi1i24b_b | long_name | String | Cvi1i24b B |
attribute | Cvi1i24b_b | units | String | bp (base pairs) |
variable | Cvi2i23_a | short | ||
attribute | Cvi2i23_a | _FillValue | short | 32767 |
attribute | Cvi2i23_a | actual_range | short | 0, 479 |
attribute | Cvi2i23_a | bcodmo_name | String | count |
attribute | Cvi2i23_a | description | String | allele 1 for locus Cvi2i23 |
attribute | Cvi2i23_a | long_name | String | Cvi2i23 A |
attribute | Cvi2i23_a | units | String | bp (base pairs) |
variable | Cvi2i23_b | short | ||
attribute | Cvi2i23_b | _FillValue | short | 32767 |
attribute | Cvi2i23_b | actual_range | short | 0, 510 |
attribute | Cvi2i23_b | bcodmo_name | String | count |
attribute | Cvi2i23_b | description | String | allele 2 for locus Cvi2i23 |
attribute | Cvi2i23_b | long_name | String | Cvi2i23 B |
attribute | Cvi2i23_b | units | String | bp (base pairs) |
variable | RUCV1_a | short | ||
attribute | RUCV1_a | _FillValue | short | 32767 |
attribute | RUCV1_a | actual_range | short | 0, 213 |
attribute | RUCV1_a | bcodmo_name | String | count |
attribute | RUCV1_a | description | String | allele 1 for locus RUCV1 |
attribute | RUCV1_a | long_name | String | RUCV1 A |
attribute | RUCV1_a | units | String | bp (base pairs) |
variable | RUCV1_b | short | ||
attribute | RUCV1_b | _FillValue | short | 32767 |
attribute | RUCV1_b | actual_range | short | 0, 241 |
attribute | RUCV1_b | bcodmo_name | String | count |
attribute | RUCV1_b | description | String | allele 2 for locus RUCV1 |
attribute | RUCV1_b | long_name | String | RUCV1 B |
attribute | RUCV1_b | units | String | bp (base pairs) |
variable | Cvi11_a | short | ||
attribute | Cvi11_a | _FillValue | short | 32767 |
attribute | Cvi11_a | actual_range | short | 0, 155 |
attribute | Cvi11_a | bcodmo_name | String | count |
attribute | Cvi11_a | description | String | allele 1 for locus Cvi11 |
attribute | Cvi11_a | long_name | String | Cvi11 A |
attribute | Cvi11_a | units | String | bp (base pairs) |
variable | Cvi11_b | short | ||
attribute | Cvi11_b | _FillValue | short | 32767 |
attribute | Cvi11_b | actual_range | short | 0, 155 |
attribute | Cvi11_b | bcodmo_name | String | count |
attribute | Cvi11_b | description | String | allele 2 for locus Cvi11 |
attribute | Cvi11_b | long_name | String | Cvi11 B |
attribute | Cvi11_b | units | String | bp (base pairs) |
variable | RUCV66_a | short | ||
attribute | RUCV66_a | _FillValue | short | 32767 |
attribute | RUCV66_a | actual_range | short | 0, 332 |
attribute | RUCV66_a | bcodmo_name | String | count |
attribute | RUCV66_a | description | String | allele 1 for locus RUCV66 |
attribute | RUCV66_a | long_name | String | RUCV66 A |
attribute | RUCV66_a | units | String | bp (base pairs) |
variable | RUCV66_b | short | ||
attribute | RUCV66_b | _FillValue | short | 32767 |
attribute | RUCV66_b | actual_range | short | 0, 338 |
attribute | RUCV66_b | bcodmo_name | String | count |
attribute | RUCV66_b | description | String | allele 2 for locus RUCV66 |
attribute | RUCV66_b | long_name | String | RUCV66 B |
attribute | RUCV66_b | units | String | bp (base pairs) |
variable | Cvi9_a | short | ||
attribute | Cvi9_a | _FillValue | short | 32767 |
attribute | Cvi9_a | actual_range | short | 95, 140 |
attribute | Cvi9_a | bcodmo_name | String | count |
attribute | Cvi9_a | description | String | allele 1 for locus Cvi9 |
attribute | Cvi9_a | long_name | String | Cvi9 A |
attribute | Cvi9_a | units | String | bp (base pairs) |
variable | Cvi9_b | short | ||
attribute | Cvi9_b | _FillValue | short | 32767 |
attribute | Cvi9_b | actual_range | short | 98, 157 |
attribute | Cvi9_b | bcodmo_name | String | count |
attribute | Cvi9_b | description | String | allele 2 for locus Cvi9 |
attribute | Cvi9_b | long_name | String | Cvi9 B |
attribute | Cvi9_b | units | String | bp (base pairs) |
variable | Cvi13_a | short | ||
attribute | Cvi13_a | _FillValue | short | 32767 |
attribute | Cvi13_a | actual_range | short | 0, 299 |
attribute | Cvi13_a | bcodmo_name | String | count |
attribute | Cvi13_a | description | String | allele 1 for locus Cvi13 |
attribute | Cvi13_a | long_name | String | Cvi13 A |
attribute | Cvi13_a | units | String | bp (base pairs) |
variable | Cvi13_b | short | ||
attribute | Cvi13_b | _FillValue | short | 32767 |
attribute | Cvi13_b | actual_range | short | 0, 304 |
attribute | Cvi13_b | bcodmo_name | String | count |
attribute | Cvi13_b | description | String | allele 2 for locus Cvi13 |
attribute | Cvi13_b | long_name | String | Cvi13 B |
attribute | Cvi13_b | units | String | bp (base pairs) |
variable | Cvi2k14_a | short | ||
attribute | Cvi2k14_a | _FillValue | short | 32767 |
attribute | Cvi2k14_a | actual_range | short | 206, 212 |
attribute | Cvi2k14_a | bcodmo_name | String | count |
attribute | Cvi2k14_a | description | String | allele 1 for locus Cvi2k14 |
attribute | Cvi2k14_a | long_name | String | Cvi2k14 A |
attribute | Cvi2k14_a | units | String | bp (base pairs) |
variable | Cvi2k14_b | short | ||
attribute | Cvi2k14_b | _FillValue | short | 32767 |
attribute | Cvi2k14_b | actual_range | short | 206, 224 |
attribute | Cvi2k14_b | bcodmo_name | String | count |
attribute | Cvi2k14_b | description | String | allele 2 for locus Cvi2k14 |
attribute | Cvi2k14_b | long_name | String | Cvi2k14 B |
attribute | Cvi2k14_b | units | String | bp (base pairs) |
variable | Cvi2j24_a | short | ||
attribute | Cvi2j24_a | _FillValue | short | 32767 |
attribute | Cvi2j24_a | actual_range | short | 0, 421 |
attribute | Cvi2j24_a | bcodmo_name | String | count |
attribute | Cvi2j24_a | description | String | allele 1 for locus Cvi2j24 |
attribute | Cvi2j24_a | long_name | String | Cvi2j24 A |
attribute | Cvi2j24_a | units | String | bp (base pairs) |
variable | Cvi2j24_b | short | ||
attribute | Cvi2j24_b | _FillValue | short | 32767 |
attribute | Cvi2j24_b | actual_range | short | 0, 421 |
attribute | Cvi2j24_b | bcodmo_name | String | count |
attribute | Cvi2j24_b | description | String | allele 2 for locus Cvi2j24 |
attribute | Cvi2j24_b | long_name | String | Cvi2j24 B |
attribute | Cvi2j24_b | units | String | bp (base pairs) |