BCO-DMO ERDDAP
Accessing BCO-DMO data 		log in    
Brought to you by BCO-DMO    
 
 
Row Type Variable Name Attribute Name Data Type Value
attribute NC_GLOBAL access_formats String .htmlTable,.csv,.json,.mat,.nc,.tsv,.esriCsv,.geoJson
attribute NC_GLOBAL acquisition_description String \"\"
attribute NC_GLOBAL awards_0_award_nid String 739620
attribute NC_GLOBAL awards_0_award_number String OCE-1658466
attribute NC_GLOBAL awards_0_data_url String http://www.nsf.gov/awardsearch/showAward.do?AwardNumber=1658466 (external link)
attribute NC_GLOBAL awards_0_funder_name String NSF Division of Ocean Sciences
attribute NC_GLOBAL awards_0_funding_acronym String NSF OCE
attribute NC_GLOBAL awards_0_funding_source_nid String 355
attribute NC_GLOBAL awards_0_program_manager String Daniel Thornhill
attribute NC_GLOBAL awards_0_program_manager_nid String 722161
attribute NC_GLOBAL awards_1_award_nid String 739627
attribute NC_GLOBAL awards_1_award_number String OCE-1658396
attribute NC_GLOBAL awards_1_data_url String http://www.nsf.gov/awardsearch/showAward.do?AwardNumber=1658396 (external link)
attribute NC_GLOBAL awards_1_funder_name String NSF Division of Ocean Sciences
attribute NC_GLOBAL awards_1_funding_acronym String NSF OCE
attribute NC_GLOBAL awards_1_funding_source_nid String 355
attribute NC_GLOBAL awards_1_program_manager String Daniel Thornhill
attribute NC_GLOBAL awards_1_program_manager_nid String 722161
attribute NC_GLOBAL awards_2_award_nid String 739631
attribute NC_GLOBAL awards_2_award_number String OCE-1658389
attribute NC_GLOBAL awards_2_data_url String http://www.nsf.gov/awardsearch/showAward.do?AwardNumber=1658389 (external link)
attribute NC_GLOBAL awards_2_funder_name String NSF Division of Ocean Sciences
attribute NC_GLOBAL awards_2_funding_acronym String NSF OCE
attribute NC_GLOBAL awards_2_funding_source_nid String 355
attribute NC_GLOBAL awards_2_program_manager String Daniel Thornhill
attribute NC_GLOBAL awards_2_program_manager_nid String 722161
attribute NC_GLOBAL cdm_data_type String Other
attribute NC_GLOBAL comment String Dates and locations of Callinectes blue crab samples from the coastal Atlantic waters of north and south America, Gulf of Mexico and Caribbean from Massachusetts to Uruguay from 2017 through 2019 \n  PI: Eric Schott \n  Version: 2020-01-16
attribute NC_GLOBAL Conventions String COARDS, CF-1.6, ACDD-1.3
attribute NC_GLOBAL creator_email String info at bco-dmo.org
attribute NC_GLOBAL creator_name String BCO-DMO
attribute NC_GLOBAL creator_type String institution
attribute NC_GLOBAL creator_url String https://www.bco-dmo.org/ (external link)
attribute NC_GLOBAL data_source String extract_data_as_tsv version 2.3  19 Dec 2019
attribute NC_GLOBAL date_created String 2020-01-06T15:26:49Z
attribute NC_GLOBAL date_modified String 2020-01-16T16:06:37Z
attribute NC_GLOBAL defaultDataQuery String &time<now
attribute NC_GLOBAL doi String 10.1575/1912/bco-dmo.785930.1
attribute NC_GLOBAL Easternmost_Easting double -36.5267
attribute NC_GLOBAL geospatial_lat_max double 41.5317
attribute NC_GLOBAL geospatial_lat_min double -34.6285
attribute NC_GLOBAL geospatial_lat_units String degrees_north
attribute NC_GLOBAL geospatial_lon_max double -36.5267
attribute NC_GLOBAL geospatial_lon_min double -97.199
attribute NC_GLOBAL geospatial_lon_units String degrees_east
attribute NC_GLOBAL infoUrl String https://www.bco-dmo.org/dataset/785930 (external link)
attribute NC_GLOBAL institution String BCO-DMO
attribute NC_GLOBAL keywords String bco, bco-dmo, biological, chemical, collaborator, collection, Collection_method, data, dataset, dmo, erddap, geo, Geo_location_name, identifier, info, lat_lon, latitude, longitude, management, method, month, month_and_year, name, oceanography, office, permitting, Permitting_info, preliminary, project, Project_Identifier, sample, sample_ID, Sample_size, size, year
attribute NC_GLOBAL license String https://www.bco-dmo.org/dataset/785930/license (external link)
attribute NC_GLOBAL metadata_source String https://www.bco-dmo.org/api/dataset/785930 (external link)
attribute NC_GLOBAL Northernmost_Northing double 41.5317
attribute NC_GLOBAL param_mapping String {'785930': {'Latitude': 'flag - latitude', 'Longitude': 'flag - longitude'}}
attribute NC_GLOBAL parameter_source String https://www.bco-dmo.org/mapserver/dataset/785930/parameters (external link)
attribute NC_GLOBAL people_0_affiliation String University of Maryland Center for Environmental Science
attribute NC_GLOBAL people_0_affiliation_acronym String UMCES/IMET
attribute NC_GLOBAL people_0_person_name String Eric Schott
attribute NC_GLOBAL people_0_person_nid String 739623
attribute NC_GLOBAL people_0_role String Principal Investigator
attribute NC_GLOBAL people_0_role_type String originator
attribute NC_GLOBAL people_1_affiliation String University of Florida
attribute NC_GLOBAL people_1_affiliation_acronym String UF
attribute NC_GLOBAL people_1_person_name String Donald Behringer
attribute NC_GLOBAL people_1_person_nid String 472641
attribute NC_GLOBAL people_1_role String Co-Principal Investigator
attribute NC_GLOBAL people_1_role_type String originator
attribute NC_GLOBAL people_2_affiliation String Shedd Aquarium
attribute NC_GLOBAL people_2_person_name String Andrew Kough
attribute NC_GLOBAL people_2_person_nid String 739633
attribute NC_GLOBAL people_2_role String Co-Principal Investigator
attribute NC_GLOBAL people_2_role_type String originator
attribute NC_GLOBAL people_3_affiliation String University of Maryland Center for Environmental Science
attribute NC_GLOBAL people_3_affiliation_acronym String UMCES/HPL
attribute NC_GLOBAL people_3_person_name String Dr Louis V. Plough
attribute NC_GLOBAL people_3_person_nid String 627831
attribute NC_GLOBAL people_3_role String Co-Principal Investigator
attribute NC_GLOBAL people_3_role_type String originator
attribute NC_GLOBAL people_4_affiliation String Woods Hole Oceanographic Institution
attribute NC_GLOBAL people_4_affiliation_acronym String WHOI BCO-DMO
attribute NC_GLOBAL people_4_person_name String Mathew Biddle
attribute NC_GLOBAL people_4_person_nid String 708682
attribute NC_GLOBAL people_4_role String BCO-DMO Data Manager
attribute NC_GLOBAL people_4_role_type String related
attribute NC_GLOBAL project String Blue Crab Connectivity
attribute NC_GLOBAL projects_0_acronym String Blue Crab Connectivity
attribute NC_GLOBAL projects_0_description String NSF Award Abstract:\nMarine invertebrates use an array of strategies to survive, move, and reproduce across diverse and dynamic environmental conditions. This project investigates the intersection of these strategies and how they facilitate the persistence of blue crabs and a pathogenic virus along the Atlantic coast of North and South America. The widespread distribution of this crab-virus system makes it useful for investigating host-pathogen interactions. Blue crabs can reduce their activity level and induce winter dormancy in colder climates, but it is unclear how this alters progression and transmission of the pathogen. Conversely, year-round growth and reproduction of tropical blue crabs may be offset by higher pathogen abundance and activity. This project will use a combination of field and laboratory studies to reveal how crab life history and pathogen dynamics interact and adapt at the extremes of their range. Genetic sequencing, crab movement tracking and oceanographic models will be used to understand how crab-disease dynamics vary across temperate and tropical latitudes. The blue crab is an ecologically and economically important species and knowledge generated in this project will help provide management guidance to support sustainable fisheries. Best practices to avoid and limit disease will be communicated to commercial and artisanal harvesters through partnerships and workshops. Local high school and undergraduate students from underrepresented groups will be engaged through a variety of formal and informal educational programs. Public outreach will be implemented through a museum partnership with the Shedd Aquarium and will include the training of a science communication intern.\nThis collaborative project will combine empirical field and laboratory experiments, population genomics, and biophysical modeling to explore the consequences of latitude-driven changes in life history and oceanic connectivity on a trans-hemispheric pathosystem comprised of the blue crab, Callinectes sapidus, and the pathogenic virus, CsRV1. The virulence of the CsRV1 virus from tropical and temperate latitudes and the impact of overwintering will be studied by experimental virus challenges of crabs transplanted between high and low latitudes. The impact of infection and virulence on crab movement will be investigated in laboratory raceway experiments of healthy and infected crabs and in the field with acoustically tagged crabs deployed in temperate and tropical locations. Population genetic studies using thousands of genome-wide RAD sequencing markers for crabs and whole-genome sequencing for the virus will define genetic connectivity of crab and virus populations across their range, and will investigate the possible latitudinal, seascape, and life history-driven changes in blue crab and virus genomes. The two population genomic data sets are expected to provide different inferences and scales of connectivity because CsRV1 virus genotypes are transmitted only among post-larval crabs while blue crab genotypes also move by a potentially long-range dispersive larval stage. Finally, integrated biophysical models will be used to investigate the relative contributions of adult and larval dispersal on the population structure of the crab and the pathogen across a broad swath of habitat between New England and Argentina with a decade of simulations. An open-source Lagrangian stochastic model will estimate pelagic larval transport, and spatially explicit biased-correlated random walk models will estimate adult movement. Models will be informed by experimentally-derived movement and behavior data, as well as information on crab larval and adult behavior and overwintering duration available in the published literature. Under a series of scenarios in which crab behavior is affected by latitude and virus infection, statistical comparisons will be made between biophysical model-based predictions of connectivity and genetic estimates of connectivity. These analyses will advance our understanding of the physical, environmental, and biological factors that shape the dynamics of the blue crab CsRV1 pathosystem.
attribute NC_GLOBAL projects_0_end_date String 2020-06
attribute NC_GLOBAL projects_0_geolocation String Atlantic coast of north and south America from Massachusetts to Southern Brazil, Caribbean
attribute NC_GLOBAL projects_0_name String Collaborative research: Variation in life history and connectivity as drivers of pathogen-host dynamics and genetic structure in a trans-hemispheric pathosystem
attribute NC_GLOBAL projects_0_project_nid String 739621
attribute NC_GLOBAL projects_0_start_date String 2017-07
attribute NC_GLOBAL publisher_name String Biological and Chemical Oceanographic Data Management Office (BCO-DMO)
attribute NC_GLOBAL publisher_type String institution
attribute NC_GLOBAL sourceUrl String (local files)
attribute NC_GLOBAL Southernmost_Northing double -34.6285
attribute NC_GLOBAL standard_name_vocabulary String CF Standard Name Table v55
attribute NC_GLOBAL summary String Dates and locations of Callinectes blue crab samples from the coastal Atlantic waters of north and south America, Gulf of Mexico and Caribbean from Massachusetts to Uruguay from 2017 through 2019. Crab populations sampled using methods available to collaborating scientists, managers, and fishermen, as listed in the table.
attribute NC_GLOBAL title String [Blue Crab Samples] - Dates and locations of Callinectes blue crab samples from the coastal Atlantic waters of north and south America, Gulf of Mexico and Caribbean from Massachusetts to Uruguay from 2017 to 2021 (Collaborative research: Variation in life history and connectivity as drivers of pathogen-host dynamics and genetic structure in a trans-hemispheric pathosystem)
attribute NC_GLOBAL version String 1
attribute NC_GLOBAL Westernmost_Easting double -97.199
attribute NC_GLOBAL xml_source String osprey2erddap.update_xml() v1.3
variable sample_ID String
attribute sample_ID bcodmo_name String sample
attribute sample_ID description String unique identifier with place and year
attribute sample_ID long_name String Sample ID
attribute sample_ID nerc_identifier String https://vocab.nerc.ac.uk/collection/P02/current/ACYC/ (external link)
attribute sample_ID units String unitless
variable Project_Identifier String
attribute Project_Identifier bcodmo_name String project
attribute Project_Identifier description String identifier for the project
attribute Project_Identifier long_name String Project Identifier
attribute Project_Identifier units String unitless
variable Geo_location_name String
attribute Geo_location_name bcodmo_name String site
attribute Geo_location_name description String State or water body
attribute Geo_location_name long_name String Geo Location Name
attribute Geo_location_name units String unitless
variable lat_lon String
attribute lat_lon bcodmo_name String site
attribute lat_lon description String approximate lat and lon within 10km
attribute lat_lon long_name String Latitude
attribute lat_lon standard_name String latitude
attribute lat_lon units String unitless
variable month_and_year String
attribute month_and_year bcodmo_name String sample_descrip
attribute month_and_year description String Collection month and year; higher resolution dates are presented in yyyy-mm-dd format
attribute month_and_year long_name String Month And Year
attribute month_and_year units String unitless
variable Collaborator String
attribute Collaborator bcodmo_name String unknown
attribute Collaborator description String collaborating scientists; managers; and fishermen
attribute Collaborator long_name String Collaborator
attribute Collaborator units String unitless
variable Permitting_info String
attribute Permitting_info bcodmo_name String sample_descrip
attribute Permitting_info description String Authority under which collection is made
attribute Permitting_info long_name String Permitting Info
attribute Permitting_info units String unitless
variable Collection_method String
attribute Collection_method bcodmo_name String sample_descrip
attribute Collection_method description String capture method
attribute Collection_method long_name String Collection Method
attribute Collection_method units String unitless
variable Sample_size short
attribute Sample_size _FillValue short 32767
attribute Sample_size actual_range short 15, 209
attribute Sample_size bcodmo_name String sample_descrip
attribute Sample_size description String number of crabs in the collection
attribute Sample_size long_name String Sample Size
attribute Sample_size units String unitless
variable latitude double
attribute latitude _CoordinateAxisType String Lat
attribute latitude _FillValue double NaN
attribute latitude actual_range double -34.6285, 41.5317
attribute latitude axis String Y
attribute latitude bcodmo_name String latitude
attribute latitude colorBarMaximum double 90.0
attribute latitude colorBarMinimum double -90.0
attribute latitude description String latitude with negative values indicating South
attribute latitude ioos_category String Location
attribute latitude long_name String Latitude
attribute latitude nerc_identifier String https://vocab.nerc.ac.uk/collection/P09/current/LATX/ (external link)
attribute latitude standard_name String latitude
attribute latitude units String degrees_north
variable longitude double
attribute longitude _CoordinateAxisType String Lon
attribute longitude _FillValue double NaN
attribute longitude actual_range double -97.199, -36.5267
attribute longitude axis String X
attribute longitude bcodmo_name String longitude
attribute longitude colorBarMaximum double 180.0
attribute longitude colorBarMinimum double -180.0
attribute longitude description String longitude with negative values indicating West
attribute longitude ioos_category String Location
attribute longitude long_name String Longitude
attribute longitude nerc_identifier String https://vocab.nerc.ac.uk/collection/P09/current/LONX/ (external link)
attribute longitude standard_name String longitude
attribute longitude units String degrees_east

 
ERDDAP, Version 2.22
Disclaimers | Privacy Policy | Contact