Accessing BCO-DMO data
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BCO-DMO ERDDAP
Accessing BCO-DMO data |
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| Row Type | Variable Name | Attribute Name | Data Type | Value |
|---|---|---|---|---|
| attribute | NC_GLOBAL | cdm_data_type | String | Other |
| attribute | NC_GLOBAL | Conventions | String | COARDS, CF-1.6, ACDD-1.3 |
| attribute | NC_GLOBAL | creator_email | String | info at bco-dmo.org |
| attribute | NC_GLOBAL | creator_name | String | BCO-DMO |
| attribute | NC_GLOBAL | creator_url | String | https://www.bco-dmo.org/
|
| attribute | NC_GLOBAL | doi | String | 10.26008/1912/bco-dmo.854887.1 |
| attribute | NC_GLOBAL | infoUrl | String | https://www.bco-dmo.org/dataset/854887
|
| attribute | NC_GLOBAL | institution | String | BCO-DMO |
| attribute | NC_GLOBAL | license | String | The data may be used and redistributed for free but is not intended\nfor legal use, since it may contain inaccuracies. Neither the data\nContributor, ERD, NOAA, nor the United States Government, nor any\nof their employees or contractors, makes any warranty, express or\nimplied, including warranties of merchantability and fitness for a\nparticular purpose, or assumes any legal liability for the accuracy,\ncompleteness, or usefulness, of this information. |
| attribute | NC_GLOBAL | sourceUrl | String | (local files) |
| attribute | NC_GLOBAL | summary | String | Sample and genetic accession information for RNA-seq data from whole Atlantic silverside (Menidia menidia) larvae from two populations and their F1 hybrids. Larvae were reared under two different temperatures to study temperature-dependent gene regulatory divergence between locally adapted Atlantic silverside populations in 2017. \n\nThe data are deposited in the National Center for Biotechnology Information (NCBI) Sequence Read Archive (SRA) with accession numbers SRR13523227- SRR13523268 associated with BioProject PRJNA694674 and BioSamples SAMN17531688 - SAMN17531729. |
| attribute | NC_GLOBAL | title | String | [Atlantic silverside RNA-seq reads] - Sample and genetic accession information for RNA-seq data from whole Atlantic silverside (Menidia menidia) larvae from two populations and their F1 hybrids reared under different temperatures in 2017 (Collaborative research: The genomic underpinnings of local adaptation despite gene flow along a coastal environmental cline) |
| variable | BioProject | String | ||
| attribute | BioProject | long_name | String | Bioproject |
| attribute | BioProject | units | String | unitless |
| variable | BioSample | String | ||
| attribute | BioSample | long_name | String | Biosample |
| attribute | BioSample | units | String | unitless |
| variable | Sample_name | String | ||
| attribute | Sample_name | long_name | String | Sample_name |
| attribute | Sample_name | units | String | unitless |
| variable | SRA | String | ||
| attribute | SRA | long_name | String | Sra |
| attribute | SRA | units | String | unitless |
| variable | taxonomy_id | int | ||
| attribute | taxonomy_id | actual_range | int | 238744, 238744 |
| attribute | taxonomy_id | long_name | String | Taxonomy_id |
| attribute | taxonomy_id | units | String | unitless |
| variable | taxonomy_name | String | ||
| attribute | taxonomy_name | long_name | String | Taxonomy_name |
| attribute | taxonomy_name | units | String | unitless |
| variable | ecotype | String | ||
| attribute | ecotype | long_name | String | Ecotype |
| attribute | ecotype | units | String | unitless |
| variable | dev_stage | String | ||
| attribute | dev_stage | long_name | String | Dev_stage |
| attribute | dev_stage | units | String | unitless |
| variable | sex | String | ||
| attribute | sex | long_name | String | Sex |
| attribute | sex | units | String | unitless |
| variable | tissue | String | ||
| attribute | tissue | long_name | String | Tissue |
| attribute | tissue | units | String | unitless |
| variable | sample_type | String | ||
| attribute | sample_type | long_name | String | Sample_type |
| attribute | sample_type | units | String | unitless |
| variable | cross | String | ||
| attribute | cross | long_name | String | Cross |
| attribute | cross | units | String | unitless |
| variable | treatment | String | ||
| attribute | treatment | long_name | String | Treatment |
| attribute | treatment | units | String | degrees Celsius |