BCO-DMO ERDDAP
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Row Type Variable Name Attribute Name Data Type Value
attribute NC_GLOBAL cdm_data_type String Other
attribute NC_GLOBAL Conventions String COARDS, CF-1.6, ACDD-1.3
attribute NC_GLOBAL creator_email String info at bco-dmo.org
attribute NC_GLOBAL creator_name String BCO-DMO
attribute NC_GLOBAL creator_url String https://www.bco-dmo.org/ (external link)
attribute NC_GLOBAL doi String 10.26008/1912/bco-dmo.906740.1
attribute NC_GLOBAL Easternmost_Easting double -64.8109
attribute NC_GLOBAL geospatial_lon_max double -64.8109
attribute NC_GLOBAL geospatial_lon_min double -80.81375
attribute NC_GLOBAL geospatial_lon_units String degrees_east
attribute NC_GLOBAL infoUrl String https://www.bco-dmo.org/dataset/906740 (external link)
attribute NC_GLOBAL institution String BCO-DMO
attribute NC_GLOBAL license String The data may be used and redistributed for free but is not intended\nfor legal use, since it may contain inaccuracies. Neither the data\nContributor, ERD, NOAA, nor the United States Government, nor any\nof their employees or contractors, makes any warranty, express or\nimplied, including warranties of merchantability and fitness for a\nparticular purpose, or assumes any legal liability for the accuracy,\ncompleteness, or usefulness, of this information.
attribute NC_GLOBAL sourceUrl String (local files)
attribute NC_GLOBAL summary String Coral reefs host some of the most iconic symbiotic interactions in nature and are host to the highest diversity of life on the planet. Cleaning symbiosis, wherein small fish or shrimp remove external parasites and associated microorganisms from specific clients, is common on coral reefs. Sites on the reef occupied by cleaners, or \"cleaning stations\", attract a wide variety of fish species that engage in direct physical contact with the cleaner. In this study, we used a combination of ecological surveys, in situ manipulations, and laboratory experiments to examine the unique features of cleaning stations to understand transfer of bacterial and archaeal symbionts amongst fish and within coral reef environment. We used microbial 16S rRNA gene amplicons, environmental parameters, and other molecular tools to evaluate the dynamics between coral microbiomes, cleanerfish skin microbiomes, and the environment. This dataset contains metadata describing sequenced samples, including sample name, data deposition accession records, and measurements at the time of sample collection.
attribute NC_GLOBAL title String [Microbiome dynamics of coral reef and cleanerfish] - Microbiome dynamics of coral reef and cleanerfish from ecological surveys, in situ manipulations, and laboratory experiments conducted from 2020-2021 (Collaborative Research: Cleaning stations as hubs for the maintenance and recovery of microbial diversity on coral reefs.)
attribute NC_GLOBAL Westernmost_Easting double -80.81375
variable BioProject_accession String
attribute BioProject_accession long_name String Bioproject_accession
attribute BioProject_accession units String unitless
variable BioSample_accession String
attribute BioSample_accession long_name String Biosample_accession
attribute BioSample_accession units String unitless
variable sample_name String
attribute sample_name long_name String Sample_name
attribute sample_name units String unitless
variable SRA_accession String
attribute SRA_accession long_name String Sra_accession
attribute SRA_accession units String unitless
variable collection_date String
attribute collection_date long_name String Collection_date
attribute collection_date units String unitless
variable geo_loc_name String
attribute geo_loc_name long_name String Geo_loc_name
attribute geo_loc_name units String unitless
variable host String
attribute host long_name String Host
attribute host units String unitless
variable lat float
attribute lat actual_range float 17.7734, 24.82614
attribute lat long_name String Lat
attribute lat units String degrees_north
variable longitude float
attribute longitude _CoordinateAxisType String Lon
attribute longitude actual_range float -80.81375, -64.8109
attribute longitude axis String X
attribute longitude ioos_category String Location
attribute longitude long_name String Longitude
attribute longitude standard_name String longitude
attribute longitude units String degrees_east
variable isolation_source String
attribute isolation_source long_name String Isolation_source
attribute isolation_source units String unitless
variable host_common_name String
attribute host_common_name long_name String Host_common_name
attribute host_common_name units String unitless
variable host_disease String
attribute host_disease long_name String Host_disease
attribute host_disease units String unitless
variable host_condition String
attribute host_condition long_name String Host_condition
attribute host_condition units String unitless
variable host_coral_cleaner_goby_pretreatment String
attribute host_coral_cleaner_goby_pretreatment long_name String Host_coral_cleaner_goby_pretreatment
attribute host_coral_cleaner_goby_pretreatment units String unitless
variable host_coral_reef_id String
attribute host_coral_reef_id long_name String Host_coral_reef_id
attribute host_coral_reef_id units String unitless
variable location_survey_date String
attribute location_survey_date long_name String Location_survey_date
attribute location_survey_date units String unitless
variable location_mean_total_species float
attribute location_mean_total_species actual_range float 0.0, 3.666667
attribute location_mean_total_species long_name String Location_mean_total_species
attribute location_mean_total_species units String unitless
variable FCM_Pro_mL float
attribute FCM_Pro_mL actual_range float 1601.96, 255552.0
attribute FCM_Pro_mL long_name String Fcm_pro_ml
attribute FCM_Pro_mL units String cells per milliliter (cells/mL)
variable FCM_Syn_mL float
attribute FCM_Syn_mL actual_range float 22466.83, 84431.17
attribute FCM_Syn_mL long_name String Fcm_syn_ml
attribute FCM_Syn_mL units String cells per milliliter (cells/mL)
variable FCM_Peuk_mL float
attribute FCM_Peuk_mL actual_range float 1181.774, 4136.208
attribute FCM_Peuk_mL long_name String Fcm_peuk_ml
attribute FCM_Peuk_mL units String cells per milliliter (cells/mL)
variable FCM_Hbac_mL float
attribute FCM_Hbac_mL actual_range float 593263.6, 914023.3
attribute FCM_Hbac_mL long_name String Fcm_hbac_ml
attribute FCM_Hbac_mL units String cells per milliliter (cells/mL)
variable NPOC_uM float
attribute NPOC_uM actual_range float 70.05134, 257.6029
attribute NPOC_uM long_name String Npoc_um
attribute NPOC_uM units String micromolar (uM)
variable TN_uM float
attribute TN_uM actual_range float 5.411319, 11.66622
attribute TN_uM long_name String Tn_um
attribute TN_uM units String micromolar (uM)
variable phosphate float
attribute phosphate actual_range float 0.0755, 0.1634
attribute phosphate long_name String Phosphate
attribute phosphate units String micromolar (uM)
variable nitrate_nitrite float
attribute nitrate_nitrite actual_range float 0.0851, 1.259
attribute nitrate_nitrite long_name String Nitrate_nitrite
attribute nitrate_nitrite units String micromolar (uM)
variable silicate float
attribute silicate actual_range float 1.0046, 4.2762
attribute silicate long_name String Silicate
attribute silicate units String micromolar (uM)
variable NO2 float
attribute NO2 actual_range float -0.0049, 0.0764
attribute NO2 long_name String No2
attribute NO2 units String micromolar (uM)
variable ammonium float
attribute ammonium actual_range float 0.2235, 0.8573
attribute ammonium long_name String Ammonium
attribute ammonium units String micromolar (uM)
variable nitrate float
attribute nitrate actual_range float 0.0881, 1.2039
attribute nitrate long_name String Nitrate
attribute nitrate units String micromolar (uM)

 
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