Accessing BCO-DMO data
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BCO-DMO ERDDAP
Accessing BCO-DMO data |
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| Row Type | Variable Name | Attribute Name | Data Type | Value |
|---|---|---|---|---|
| attribute | NC_GLOBAL | cdm_data_type | String | Other |
| attribute | NC_GLOBAL | Conventions | String | COARDS, CF-1.6, ACDD-1.3 |
| attribute | NC_GLOBAL | creator_email | String | info at bco-dmo.org |
| attribute | NC_GLOBAL | creator_name | String | BCO-DMO |
| attribute | NC_GLOBAL | creator_url | String | https://www.bco-dmo.org/
|
| attribute | NC_GLOBAL | doi | String | 10.26008/1912/bco-dmo.914399.1 |
| attribute | NC_GLOBAL | infoUrl | String | https://www.bco-dmo.org/dataset/914399
|
| attribute | NC_GLOBAL | institution | String | BCO-DMO |
| attribute | NC_GLOBAL | license | String | The data may be used and redistributed for free but is not intended\nfor legal use, since it may contain inaccuracies. Neither the data\nContributor, ERD, NOAA, nor the United States Government, nor any\nof their employees or contractors, makes any warranty, express or\nimplied, including warranties of merchantability and fitness for a\nparticular purpose, or assumes any legal liability for the accuracy,\ncompleteness, or usefulness, of this information. |
| attribute | NC_GLOBAL | sourceUrl | String | (local files) |
| attribute | NC_GLOBAL | summary | String | Single-celled microbial eukaryotes inhabit deep-sea hydrothermal vent environments and play critical ecological roles in the vent-associated microbial food web. 18S rRNA amplicon sequencing of diffuse venting fluids from two geochemically-distinct hydrothermal vent fields was applied to investigate community diversity patterns among protistan assemblages. Piccard and Von Damm vent fields are situated 20 km apart at the Mid-Cayman Rise in the Caribbean Sea. We describe species diversity patterns with respect to hydrothermal vent field and sample type, identify putative vent endemic microbial eukaryotes, and test how vent fluid geochemistry may influence microbial community diversity. Individual vent fields supported distinct and highly diverse assemblages of protists that included potentially endemic or novel vent-associated strains. This data adds to our growing knowledge of the biogeography of deep-sea microbial eukaryotes. |
| attribute | NC_GLOBAL | title | String | [Microbial eukaryotic diversity: Mid-Cayman Rise SRA dataset] - 18S rRNA amplicon sequencing of microbial eukaryotes from the Mid-Cayman Rise acquired Jan-Feb, 2020 (Probing subseafloor microbial interactions via hydrothermal vent fluids: A focus on protists) |
| variable | Experiment_Accession | String | ||
| attribute | Experiment_Accession | long_name | String | Experiment_accession |
| attribute | Experiment_Accession | units | String | unitless |
| variable | Experiment_Title | String | ||
| attribute | Experiment_Title | long_name | String | Experiment_title |
| attribute | Experiment_Title | units | String | unitless |
| variable | Organism_Name | String | ||
| attribute | Organism_Name | long_name | String | Organism_name |
| attribute | Organism_Name | units | String | unitless |
| variable | Instrument | String | ||
| attribute | Instrument | long_name | String | Instrument |
| attribute | Instrument | units | String | unitless |
| variable | Study_Accession | String | ||
| attribute | Study_Accession | long_name | String | Study_accession |
| attribute | Study_Accession | units | String | unitless |
| variable | Study_Title | String | ||
| attribute | Study_Title | long_name | String | Study_title |
| attribute | Study_Title | units | String | unitless |
| variable | Sample_Accession | String | ||
| attribute | Sample_Accession | long_name | String | Sample_accession |
| attribute | Sample_Accession | units | String | unitless |
| variable | Total_Size_Mb | float | ||
| attribute | Total_Size_Mb | long_name | String | Total_size_mb |
| attribute | Total_Size_Mb | units | String | Mb |
| variable | Total_Bases | int | ||
| attribute | Total_Bases | actual_range | int | 375000, 238791000 |
| attribute | Total_Bases | long_name | String | Total_bases |
| attribute | Total_Bases | units | String | bp |
| variable | Library_Name | String | ||
| attribute | Library_Name | long_name | String | Library_name |
| attribute | Library_Name | units | String | unitless |
| variable | Library_Strategy | String | ||
| attribute | Library_Strategy | long_name | String | Library_strategy |
| attribute | Library_Strategy | units | String | unitless |
| variable | Library_Source | String | ||
| attribute | Library_Source | long_name | String | Library_source |
| attribute | Library_Source | units | String | unitless |
| variable | Library_Selection | String | ||
| attribute | Library_Selection | long_name | String | Library_selection |
| attribute | Library_Selection | units | String | unitless |
| variable | Vent_field | String | ||
| attribute | Vent_field | long_name | String | Vent_field |
| attribute | Vent_field | units | String | unitless |
| variable | Collection | String | ||
| attribute | Collection | long_name | String | Collection |
| attribute | Collection | units | String | unitless |
| variable | Vent_name | String | ||
| attribute | Vent_name | long_name | String | Vent_name |
| attribute | Vent_name | units | String | unitless |
| variable | DiveID | String | ||
| attribute | DiveID | long_name | String | Diveid |
| attribute | DiveID | units | String | unitless |