BCO-DMO ERDDAP
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Row Type Variable Name Attribute Name Data Type Value
attribute NC_GLOBAL cdm_data_type String Other
attribute NC_GLOBAL Conventions String COARDS, CF-1.6, ACDD-1.3
attribute NC_GLOBAL creator_email String info at bco-dmo.org
attribute NC_GLOBAL creator_name String BCO-DMO
attribute NC_GLOBAL creator_url String https://www.bco-dmo.org/ (external link)
attribute NC_GLOBAL doi String 10.26008/1912/bco-dmo.918220.1
attribute NC_GLOBAL Easternmost_Easting double -80.0974
attribute NC_GLOBAL geospatial_lon_max double -80.0974
attribute NC_GLOBAL geospatial_lon_min double -80.1005
attribute NC_GLOBAL geospatial_lon_units String degrees_east
attribute NC_GLOBAL infoUrl String https://www.bco-dmo.org/dataset/918220 (external link)
attribute NC_GLOBAL institution String BCO-DMO
attribute NC_GLOBAL license String The data may be used and redistributed for free but is not intended\nfor legal use, since it may contain inaccuracies. Neither the data\nContributor, ERD, NOAA, nor the United States Government, nor any\nof their employees or contractors, makes any warranty, express or\nimplied, including warranties of merchantability and fitness for a\nparticular purpose, or assumes any legal liability for the accuracy,\ncompleteness, or usefulness, of this information.
attribute NC_GLOBAL sourceUrl String (local files)
attribute NC_GLOBAL summary String This dataset contains results from assays to quantify the abundance and photochemical performance of Breviolum, Cladocopium, and Durusdinium symbionts relative to coral cells in Montastraea cavernosa, Orbicella faveolata, and Siderastrea siderea corals collected from colonies in southeast Florida in April 2019 and in October 2019, before, during and after aquarium-based experimental heat stress tests. Bulk genomic DNA was extracted from tissue scrapings taken from 2.5cm diameter cores of corals and was used as a template for symbiont genus-specific qPCR assays. The resulting CT values were used to calculate the relative abundance of each symbiont genus within each coral core over the course of the heat stress. The photochemical efficiency of each coral core was also measured periodically throughout heat stress tests using an imaging pulse amplitude modulated (I-PAM) fluorometer. The publication based on these data is Buzzoni, et al. (2023) (DOI: 10.1007/s00338-023-02428-x).
attribute NC_GLOBAL title String [qPCR assays] - Results from qPCR assays to quantify the abundance and photochemical performance of symbionts relative to coral cells in three coral species collected from colonies in southeast Florida in April and October 2019 before, during, and after heat stress tests (Collaborative Research: Assessing the changing symbiotic milieu on Caribbean coral reefs under climate change: magnitude, tradeoffs, interventions, and implications)
attribute NC_GLOBAL Westernmost_Easting double -80.1005
variable Species String
attribute Species long_name String Species
attribute Species units String unitless
variable Treatment String
attribute Treatment long_name String Treatment
attribute Treatment units String unitless
variable Core String
attribute Core long_name String Core
attribute Core units String unitless
variable Collection_Latitude float
attribute Collection_Latitude actual_range float 25.6773, 25.6788
attribute Collection_Latitude long_name String Collection_latitude
attribute Collection_Latitude units String degrees_north
variable longitude float
attribute longitude _CoordinateAxisType String Lon
attribute longitude actual_range float -80.1005, -80.0974
attribute longitude axis String X
attribute longitude ioos_category String Location
attribute longitude long_name String Collection_longitude
attribute longitude standard_name String longitude
attribute longitude units String degrees_east
variable Timepoint String
attribute Timepoint long_name String Timepoint
attribute Timepoint units String unitless
variable Sym_Host float
attribute Sym_Host actual_range float 0.0, 0.5036345
attribute Sym_Host long_name String Sym_host
attribute Sym_Host units String unitless
variable Y2 float
attribute Y2 actual_range float 0.053, 0.61
attribute Y2 long_name String Y2
attribute Y2 units String unitless
variable PropD float
attribute PropD actual_range float 0.0, 1.0
attribute PropD long_name String Propd
attribute PropD units String unitless
variable Batch int
attribute Batch actual_range int 1, 2
attribute Batch long_name String Batch
attribute Batch units String unitless
variable Date String
attribute Date long_name String Date
attribute Date units String unitless
variable Colony int
attribute Colony actual_range int 2, 100
attribute Colony long_name String Colony
attribute Colony units String unitless

 
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