BCO-DMO ERDDAP
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Row Type Variable Name Attribute Name Data Type Value
attribute NC_GLOBAL cdm_data_type String Other
attribute NC_GLOBAL Conventions String COARDS, CF-1.6, ACDD-1.3
attribute NC_GLOBAL creator_email String info at bco-dmo.org
attribute NC_GLOBAL creator_name String BCO-DMO
attribute NC_GLOBAL creator_url String https://www.bco-dmo.org/ (external link)
attribute NC_GLOBAL doi String 10.26008/1912/bco-dmo.924852.1
attribute NC_GLOBAL Easternmost_Easting double 144.9032
attribute NC_GLOBAL geospatial_lat_max double 67.268
attribute NC_GLOBAL geospatial_lat_min double 32.71376
attribute NC_GLOBAL geospatial_lat_units String degrees_north
attribute NC_GLOBAL geospatial_lon_max double 144.9032
attribute NC_GLOBAL geospatial_lon_min double -164.7619
attribute NC_GLOBAL geospatial_lon_units String degrees_east
attribute NC_GLOBAL infoUrl String https://www.bco-dmo.org/dataset/924852 (external link)
attribute NC_GLOBAL institution String BCO-DMO
attribute NC_GLOBAL license String The data may be used and redistributed for free but is not intended\nfor legal use, since it may contain inaccuracies. Neither the data\nContributor, ERD, NOAA, nor the United States Government, nor any\nof their employees or contractors, makes any warranty, express or\nimplied, including warranties of merchantability and fitness for a\nparticular purpose, or assumes any legal liability for the accuracy,\ncompleteness, or usefulness, of this information.
attribute NC_GLOBAL Northernmost_Northing double 67.268
attribute NC_GLOBAL sourceUrl String (local files)
attribute NC_GLOBAL Southernmost_Northing double 32.71376
attribute NC_GLOBAL summary String This dataset includes sample collection and sequence accession information for Zostera marina whole genome resequencing from specimens collected at 16 geographic locations worldwide in 2017. Sequence accessions are housed in the National Center for Biotechnology Information (NCBI) Sequence Read Archive (SRA).
attribute NC_GLOBAL title String [Zostera marina whole genome resequencing] - Sample collection and sequence accession information for Zostera marina whole genome resequencing from specimens collected at 16 geographic locations worldwide in 2017 (Using genomics to link traits to ecosystem function in the eelgrass Zostera marina)
attribute NC_GLOBAL Westernmost_Easting double -164.7619
variable SampleID String
attribute SampleID long_name String Sampleid
attribute SampleID units String unitless
variable BioProject String
attribute BioProject long_name String Bioproject
attribute BioProject units String unitless
variable Library_Code String
attribute Library_Code long_name String Library_code
attribute Library_Code units String unitless
variable Sample_Description String
attribute Sample_Description long_name String Sample_description
attribute Sample_Description units String unitless
variable Location_Name String
attribute Location_Name long_name String Location_name
attribute Location_Name units String unitless
variable latitude float
attribute latitude _CoordinateAxisType String Lat
attribute latitude actual_range float 32.71376, 67.268
attribute latitude axis String Y
attribute latitude ioos_category String Location
attribute latitude long_name String Latitude
attribute latitude standard_name String latitude
attribute latitude units String degrees_north
variable longitude float
attribute longitude _CoordinateAxisType String Lon
attribute longitude actual_range float -164.7619, 144.9032
attribute longitude axis String X
attribute longitude ioos_category String Location
attribute longitude long_name String Long
attribute longitude standard_name String longitude
attribute longitude units String degrees_east
variable SRA_accession String
attribute SRA_accession long_name String Sra_accession
attribute SRA_accession units String unitless
variable Library_type String
attribute Library_type long_name String Library_type
attribute Library_type units String unitless
variable Sampled_tissue String
attribute Sampled_tissue long_name String Sampled_tissue
attribute Sampled_tissue units String unitless
variable Instrument String
attribute Instrument long_name String Instrument
attribute Instrument units String unitless
variable reads String
attribute reads long_name String Reads
attribute reads units String unitless
variable Number_of_bases_Raw_fastq int
attribute Number_of_bases_Raw_fastq long_name String Number_of_bases_raw_fastq
attribute Number_of_bases_Raw_fastq units String count
variable Coverage_Raw_fastq float
attribute Coverage_Raw_fastq actual_range float 23.21, 106.84
attribute Coverage_Raw_fastq long_name String Coverage_raw_fastq
attribute Coverage_Raw_fastq units String genomes
variable Number_of_bases_Clean_fastq int
attribute Number_of_bases_Clean_fastq long_name String Number_of_bases_clean_fastq
attribute Number_of_bases_Clean_fastq units String count
variable Coverage_Clean_fastq float
attribute Coverage_Clean_fastq actual_range float 21.0, 99.31
attribute Coverage_Clean_fastq long_name String Coverage_clean_fastq
attribute Coverage_Clean_fastq units String genomes
variable Mapped_pcnt float
attribute Mapped_pcnt actual_range float 16.86, 99.96
attribute Mapped_pcnt long_name String Mapped_pcnt
attribute Mapped_pcnt units String percent
variable Properly_paired_pcnt float
attribute Properly_paired_pcnt actual_range float 15.4, 98.81
attribute Properly_paired_pcnt long_name String Properly_paired_pcnt
attribute Properly_paired_pcnt units String percent

 
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