BCO-DMO ERDDAP
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Row Type Variable Name Attribute Name Data Type Value
attribute NC_GLOBAL cdm_data_type String Other
attribute NC_GLOBAL Conventions String COARDS, CF-1.6, ACDD-1.3
attribute NC_GLOBAL creator_email String info at bco-dmo.org
attribute NC_GLOBAL creator_name String BCO-DMO
attribute NC_GLOBAL creator_url String https://www.bco-dmo.org/ (external link)
attribute NC_GLOBAL doi String 10.26008/1912/bco-dmo.930084.1
attribute NC_GLOBAL Easternmost_Easting double -157.7663
attribute NC_GLOBAL geospatial_lat_max double 21.526
attribute NC_GLOBAL geospatial_lat_min double 21.43635
attribute NC_GLOBAL geospatial_lat_units String degrees_north
attribute NC_GLOBAL geospatial_lon_max double -157.7663
attribute NC_GLOBAL geospatial_lon_min double -157.8358
attribute NC_GLOBAL geospatial_lon_units String degrees_east
attribute NC_GLOBAL geospatial_vertical_max double 2.0
attribute NC_GLOBAL geospatial_vertical_min double 2.0
attribute NC_GLOBAL geospatial_vertical_positive String down
attribute NC_GLOBAL geospatial_vertical_units String m
attribute NC_GLOBAL infoUrl String https://www.bco-dmo.org/dataset/930084 (external link)
attribute NC_GLOBAL institution String BCO-DMO
attribute NC_GLOBAL license String The data may be used and redistributed for free but is not intended\nfor legal use, since it may contain inaccuracies. Neither the data\nContributor, ERD, NOAA, nor the United States Government, nor any\nof their employees or contractors, makes any warranty, express or\nimplied, including warranties of merchantability and fitness for a\nparticular purpose, or assumes any legal liability for the accuracy,\ncompleteness, or usefulness, of this information.
attribute NC_GLOBAL Northernmost_Northing double 21.526
attribute NC_GLOBAL sourceUrl String (local files)
attribute NC_GLOBAL Southernmost_Northing double 21.43635
attribute NC_GLOBAL summary String These data include temperature, pH, salinity, chlorophyll a concentrations, cellular abundances of Prochlorococcus, Synechococcus, photosynthetic picoeukaryotes, and heterotrophic bacteria, and 16S ribosomal RNA gene amplicon libraries from 200 surface seawater samples collected as part of the Kāneʻohe Bay Time-series (KByT). Near-monthly sampling of surface seawater was conducted between August 2017 to June 2019 at 10 sites within coastal waters of Kāneʻohe Bay, Oʻahu, Hawaiʻi and in the adjacent offshore. Instruments used were a YSI 6,600 sonde, a Turner 10AU fluorometer, an EPICS ALTRA flow cytometer, and an Illumina MiSeq v2 platform.\n\nThese data characterize the partitioning of microbial communities across sharp physiochemical gradients in surface seawaters connecting nearshore and offshore waters in the tropical Pacific. This study provides evidence for the ecological differentiation of SAR11 marine bacteria across nearshore to offshore waters in the tropical Pacific and further increases our understanding of how SAR11 genetic diversity partitions into distinct ecological units. Data were collected by Sarah J. Tucker, Kelle C. Freel, Elizabeth A. Monaghan, Clarisse E. S. Sullivan, Oscar Ramfelt, Yoshimi M. Rii, and Michael S. Rappé.
attribute NC_GLOBAL title String [Kāneʻohe Bay Time-series - microbial community] - Flow cytometry, 16S rRNA gene amplicons, chlorophyll a, and surface seawater measurements  taken between August 2017 to June 2019 Kāneʻohe Bay, Oʻahu, Hawaiʻi (Population genomics and ecotypic divergence in the most dominant lineage of marine bacteria)
attribute NC_GLOBAL Westernmost_Easting double -157.8358
variable Sample_ID String
attribute Sample_ID long_name String Sample_id
attribute Sample_ID units String unitless
variable collection_date String
attribute collection_date long_name String Collection_date
attribute collection_date units String unitless
variable depth int
attribute depth _CoordinateAxisType String Height
attribute depth _CoordinateZisPositive String down
attribute depth actual_range int 2, 2
attribute depth axis String Z
attribute depth ioos_category String Location
attribute depth long_name String Depth
attribute depth positive String down
attribute depth standard_name String depth
attribute depth units String m
variable env_broad_scale String
attribute env_broad_scale long_name String Env_broad_scale
attribute env_broad_scale units String unitless
variable env_local_scale String
attribute env_local_scale long_name String Env_local_scale
attribute env_local_scale units String unitless
variable env_medium String
attribute env_medium long_name String Env_medium
attribute env_medium units String unitless
variable geo_loc_name String
attribute geo_loc_name long_name String Geo_loc_name
attribute geo_loc_name units String unitless
variable latitude float
attribute latitude _CoordinateAxisType String Lat
attribute latitude actual_range float 21.43635, 21.526
attribute latitude axis String Y
attribute latitude ioos_category String Location
attribute latitude long_name String Latitude
attribute latitude standard_name String latitude
attribute latitude units String degrees_north
variable longitude float
attribute longitude _CoordinateAxisType String Lon
attribute longitude actual_range float -157.8358, -157.7663
attribute longitude axis String X
attribute longitude ioos_category String Location
attribute longitude long_name String Longitude
attribute longitude standard_name String longitude
attribute longitude units String degrees_east
variable Site_name String
attribute Site_name long_name String Site_name
attribute Site_name units String unitless
variable chlorophyll_a_ug_per_L float
attribute chlorophyll_a_ug_per_L actual_range float 0.22, 2.74
attribute chlorophyll_a_ug_per_L long_name String Chlorophyll_a_ug_per_l
attribute chlorophyll_a_ug_per_L units String micrograms per Liter
variable ph float
attribute ph actual_range float 7.45, 8.64
attribute ph long_name String Ph
attribute ph units String no unit
variable salinity float
attribute salinity actual_range float 31.81, 36.97
attribute salinity long_name String Salinity
attribute salinity units String ppt
variable Seawater_temperature float
attribute Seawater_temperature actual_range float 23.07, 28.99
attribute Seawater_temperature long_name String Seawater_temperature
attribute Seawater_temperature units String degrees Celsius  (°C)
variable Prochlorococcus_cells_per_mL int
attribute Prochlorococcus_cells_per_mL actual_range int 0, 113833
attribute Prochlorococcus_cells_per_mL long_name String Prochlorococcus_cells_per_ml
attribute Prochlorococcus_cells_per_mL units String cells per mL
variable Synechococcus_cells_per_mL int
attribute Synechococcus_cells_per_mL actual_range int 2074, 517913
attribute Synechococcus_cells_per_mL long_name String Synechococcus_cells_per_ml
attribute Synechococcus_cells_per_mL units String cells per mL
variable Heterotrophic_bacteria_cells_per_mL int
attribute Heterotrophic_bacteria_cells_per_mL actual_range int 348075, 2667000
attribute Heterotrophic_bacteria_cells_per_mL long_name String Heterotrophic_bacteria_cells_per_ml
attribute Heterotrophic_bacteria_cells_per_mL units String cells per mL
variable Eukaryotic_picophytoplankton_cells_per_mL int
attribute Eukaryotic_picophytoplankton_cells_per_mL actual_range int 1549, 117338
attribute Eukaryotic_picophytoplankton_cells_per_mL long_name String Eukaryotic_picophytoplankton_cells_per_ml
attribute Eukaryotic_picophytoplankton_cells_per_mL units String cells per mL
variable Universal_Sample_ID String
attribute Universal_Sample_ID long_name String Universal_sample_id
attribute Universal_Sample_ID units String unitless
variable SRA_accession String
attribute SRA_accession long_name String Sra_accession
attribute SRA_accession units String unitless
variable study String
attribute study long_name String Study
attribute study units String unitless
variable bioproject_accession String
attribute bioproject_accession long_name String Bioproject_accession
attribute bioproject_accession units String unitless
variable biosample_accession String
attribute biosample_accession long_name String Biosample_accession
attribute biosample_accession units String unitless
variable library_ID String
attribute library_ID long_name String Library_id
attribute library_ID units String unitless
variable library_strategy String
attribute library_strategy long_name String Library_strategy
attribute library_strategy units String unitless
variable library_source String
attribute library_source long_name String Library_source
attribute library_source units String unitless
variable library_selection String
attribute library_selection long_name String Library_selection
attribute library_selection units String unitless
variable library_layout String
attribute library_layout long_name String Library_layout
attribute library_layout units String unitless
variable platform String
attribute platform long_name String Platform
attribute platform units String unitless
variable instrument_model String
attribute instrument_model long_name String Instrument_model
attribute instrument_model units String unitless
variable design_description String
attribute design_description long_name String Design_description
attribute design_description units String unitless
variable filetype String
attribute filetype long_name String Filetype
attribute filetype units String unitless
variable filename String
attribute filename long_name String Filename
attribute filename units String unitless
variable filename2 String
attribute filename2 long_name String Filename2
attribute filename2 units String unitless

 
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