Accessing BCO-DMO data
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BCO-DMO ERDDAP
Accessing BCO-DMO data |
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Brought to you by BCO-DMO |
| Row Type | Variable Name | Attribute Name | Data Type | Value |
|---|---|---|---|---|
| attribute | NC_GLOBAL | cdm_data_type | String | Other |
| attribute | NC_GLOBAL | Conventions | String | COARDS, CF-1.6, ACDD-1.3 |
| attribute | NC_GLOBAL | creator_email | String | info at bco-dmo.org |
| attribute | NC_GLOBAL | creator_name | String | BCO-DMO |
| attribute | NC_GLOBAL | creator_url | String | https://www.bco-dmo.org/
|
| attribute | NC_GLOBAL | doi | String | 10.26008/1912/bco-dmo.949666.1 |
| attribute | NC_GLOBAL | infoUrl | String | https://www.bco-dmo.org/dataset/949666
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| attribute | NC_GLOBAL | institution | String | BCO-DMO |
| attribute | NC_GLOBAL | license | String | The data may be used and redistributed for free but is not intended\nfor legal use, since it may contain inaccuracies. Neither the data\nContributor, ERD, NOAA, nor the United States Government, nor any\nof their employees or contractors, makes any warranty, express or\nimplied, including warranties of merchantability and fitness for a\nparticular purpose, or assumes any legal liability for the accuracy,\ncompleteness, or usefulness, of this information. |
| attribute | NC_GLOBAL | sourceUrl | String | (local files) |
| attribute | NC_GLOBAL | summary | String | This project explores genomic changes in the invasive European green crab (Carcinus maenas), including at a putative inversion polymorphism. To begin to explore structural variation without a reference genome, we conducted semi-targeted longread sequencing of the C. maenas genome using MinION sequencing. This dataset includes individual metadata for 6 raw MinION reads, archived at GenBank's SRA under BioProject PRJNA1171011. This sequencing was conducted using crabs from Massachusetts waters. |
| attribute | NC_GLOBAL | title | String | [Metadata for longread sequencing of Carcinus maenas] - Metadata for longread sequencing of Carcinus maenas collected from Buzzard's Bay, Massachusetts from May 2022 to Aug 2022 (Collaborative Research: Tracking fine-scale selection to temperature at the invasion front of a highly dispersive marine predator) |
| variable | sample_name | String | ||
| attribute | sample_name | long_name | String | Sample_name |
| attribute | sample_name | units | String | unitless |
| variable | Collection_date | String | ||
| attribute | Collection_date | long_name | String | Collection_date |
| attribute | Collection_date | units | String | unitless |
| variable | SRA_accession | String | ||
| attribute | SRA_accession | long_name | String | Sra_accession |
| attribute | SRA_accession | units | String | unitless |
| variable | biosample_accession | String | ||
| attribute | biosample_accession | long_name | String | Biosample_accession |
| attribute | biosample_accession | units | String | unitless |
| variable | embayment | String | ||
| attribute | embayment | long_name | String | Embayment |
| attribute | embayment | units | String | unitless |
| variable | state | String | ||
| attribute | state | long_name | String | State |
| attribute | state | units | String | unitless |
| variable | sex | String | ||
| attribute | sex | long_name | String | Sex |
| attribute | sex | units | String | unitless |
| variable | life_stage | String | ||
| attribute | life_stage | long_name | String | Life_stage |
| attribute | life_stage | units | String | unitless |
| variable | run_ID | String | ||
| attribute | run_ID | long_name | String | Run_id |
| attribute | run_ID | units | String | unitless |
| variable | sequencing_date | String | ||
| attribute | sequencing_date | long_name | String | Sequencing_date |
| attribute | sequencing_date | units | String | unitless |
| variable | run_day | int | ||
| attribute | run_day | actual_range | int | 1, 2 |
| attribute | run_day | long_name | String | Run_day |
| attribute | run_day | units | String | days |
| variable | probe_set | String | ||
| attribute | probe_set | long_name | String | Probe_set |
| attribute | probe_set | units | String | unitless |