BCO-DMO ERDDAP
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Row Type Variable Name Attribute Name Data Type Value
attribute NC_GLOBAL cdm_data_type String Other
attribute NC_GLOBAL Conventions String COARDS, CF-1.6, ACDD-1.3
attribute NC_GLOBAL creator_email String info at bco-dmo.org
attribute NC_GLOBAL creator_name String BCO-DMO
attribute NC_GLOBAL creator_url String https://www.bco-dmo.org/ (external link)
attribute NC_GLOBAL doi String 10.26008/1912/bco-dmo.965379.1
attribute NC_GLOBAL Easternmost_Easting double 10.62
attribute NC_GLOBAL geospatial_lat_max double 81.04
attribute NC_GLOBAL geospatial_lat_min double 81.04
attribute NC_GLOBAL geospatial_lat_units String degrees_north
attribute NC_GLOBAL geospatial_lon_max double 10.62
attribute NC_GLOBAL geospatial_lon_min double 10.62
attribute NC_GLOBAL geospatial_lon_units String degrees_east
attribute NC_GLOBAL infoUrl String https://osprey.bco-dmo.org/dataset/965379 (external link)
attribute NC_GLOBAL institution String BCO-DMO
attribute NC_GLOBAL license String The data may be used and redistributed for free but is not intended\nfor legal use, since it may contain inaccuracies. Neither the data\nContributor, ERD, NOAA, nor the United States Government, nor any\nof their employees or contractors, makes any warranty, express or\nimplied, including warranties of merchantability and fitness for a\nparticular purpose, or assumes any legal liability for the accuracy,\ncompleteness, or usefulness, of this information.
attribute NC_GLOBAL Northernmost_Northing double 81.04
attribute NC_GLOBAL sourceUrl String (local files)
attribute NC_GLOBAL Southernmost_Northing double 81.04
attribute NC_GLOBAL summary String Bacteria were cultured and sequenced from the Arctic Ocean under 2-meter-thick sea ice to identify patterns of gene, loss, and rearrangement. Cultures were obtained by high-throughput dilution to extinction cultivation using cryopreserved samples. Bacteria selected for genome sequencing were grown in 1 liter of Puget Sound seawater media and sequenced using the Oxford Nanopore Technologies (ONT) R10.4.1 Flongle flow cells with the SQK-RAD114 rapid library prep kit (Oxford Nanopore Technologies, Oxford, United Kingdom). Time-series data indicate that this collection represents up to 60% of the marine bacterial community in the Arctic. Their complete genomes provide insights into the evolutionary processes that underlie diversity and adaptation to the Arctic Ocean.
attribute NC_GLOBAL title String [Arctic Bacterial Genomes] - Under the ice bacterial cultures and genome sequences from the R/V Kronprins Haakon in the Arctic Ocean from May 18 to 21, 2023 (Collaborative Research: Drivers and effects of latent phage activation in marine SAR11)
attribute NC_GLOBAL Westernmost_Easting double 10.62
variable isolate String
attribute isolate long_name String Isolate
attribute isolate units String unitless
variable Date String
attribute Date long_name String Date
attribute Date units String unitless
variable latitude float
attribute latitude _CoordinateAxisType String Lat
attribute latitude actual_range float 81.04, 81.04
attribute latitude axis String Y
attribute latitude ioos_category String Location
attribute latitude long_name String Latitude
attribute latitude standard_name String latitude
attribute latitude units String degrees_north
variable longitude float
attribute longitude _CoordinateAxisType String Lon
attribute longitude actual_range float 10.62, 10.62
attribute longitude axis String X
attribute longitude ioos_category String Location
attribute longitude long_name String Longitude
attribute longitude standard_name String longitude
attribute longitude units String degrees_east
variable id String
attribute id long_name String Id
attribute id units String unitless
variable genome_length int
attribute genome_length actual_range int 1288290, 3786980
attribute genome_length long_name String Genome_length
attribute genome_length units String number of nucleotides
variable sequencing_covearge int
attribute sequencing_covearge actual_range int 11, 352
attribute sequencing_covearge long_name String Sequencing_covearge
attribute sequencing_covearge units String unitless
variable pcnt_gc float
attribute pcnt_gc actual_range float 29.0, 52.0
attribute pcnt_gc long_name String Pcnt_gc
attribute pcnt_gc units String unitless
variable coding_ratio float
attribute coding_ratio actual_range float 84.5, 95.9
attribute coding_ratio long_name String Coding_ratio
attribute coding_ratio units String unitless
variable rRNA int
attribute rRNA actual_range int 3, 12
attribute rRNA long_name String Rrna
attribute rRNA units String unitless
variable genome_accession String
attribute genome_accession long_name String Genome_accession
attribute genome_accession units String unitless
variable bioproject String
attribute bioproject long_name String Bioproject
attribute bioproject units String unitless
variable biosample String
attribute biosample long_name String Biosample
attribute biosample units String unitless
variable sequence_read_archive String
attribute sequence_read_archive long_name String Sequence_read_archive
attribute sequence_read_archive units String unitless

 
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