BCO-DMO ERDDAP
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Row Type Variable Name Attribute Name Data Type Value
attribute NC_GLOBAL cdm_data_type String Other
attribute NC_GLOBAL Conventions String COARDS, CF-1.6, ACDD-1.3
attribute NC_GLOBAL creator_email String info at bco-dmo.org
attribute NC_GLOBAL creator_name String BCO-DMO
attribute NC_GLOBAL creator_url String https://www.bco-dmo.org/ (external link)
attribute NC_GLOBAL doi String 10.26008/1912/bco-dmo.986127.1
attribute NC_GLOBAL infoUrl String https://osprey.bco-dmo.org/dataset/986127 (external link)
attribute NC_GLOBAL institution String BCO-DMO
attribute NC_GLOBAL license String The data may be used and redistributed for free but is not intended\nfor legal use, since it may contain inaccuracies. Neither the data\nContributor, ERD, NOAA, nor the United States Government, nor any\nof their employees or contractors, makes any warranty, express or\nimplied, including warranties of merchantability and fitness for a\nparticular purpose, or assumes any legal liability for the accuracy,\ncompleteness, or usefulness, of this information.
attribute NC_GLOBAL sourceUrl String (local files)
attribute NC_GLOBAL summary String The cyanobacterium Prochlorococcus has a conspicuously reduced genome causing it to require help from co-existing organisms for survival under a variety of stressful conditions. In this work we used conditioned media experiments to demonstrate that exudates of the heterotrophic bacterium Alteromonas macleodii EZ55 facilitated the survival of Prochlorococcus MIT9312 batch co-cultures as they entered stationary phase. Based on mass spectrometry analysis, Alteromonas exudates contained a wide variety of proteins. These proteins were significantly different between exudates and whole-cell lysates, suggesting they represented programmatic release instead of simple lysis. Moreover, the composition of exudates changed after 500 generations of adaptation to co-culture with Prochlorococcus, suggesting genetic regulation of protein release.
attribute NC_GLOBAL title String [Proteomic analysis of Alteromonas macleodii exudates] - Proteomic analysis of Alteromonas macleodii exudates (Collaborative Research: Extracellular vesicles as vehicles for microbial interactions in marine Black Queen communities)
variable Accession String
attribute Accession long_name String Accession
attribute Accession units String unitless
variable KO String
attribute KO long_name String Ko
attribute KO units String unitless
variable Name String
attribute Name long_name String Name
attribute Name units String unitless
variable MW float
attribute MW actual_range float 5067.037, 510140.3
attribute MW long_name String Mw
attribute MW units String daltons (Da)
variable Localization String
attribute Localization long_name String Localization
attribute Localization units String unitless
variable Score float
attribute Score actual_range float 2.0, 10.0
attribute Score long_name String Score
attribute Score units String unitless
variable LTPE26_Supernatant String
attribute LTPE26_Supernatant long_name String Ltpe26_supernatant
attribute LTPE26_Supernatant units String unitless
variable LTPE397_Supernatant String
attribute LTPE397_Supernatant long_name String Ltpe397_supernatant
attribute LTPE397_Supernatant units String unitless
variable LTPE403_Supernatant String
attribute LTPE403_Supernatant long_name String Ltpe403_supernatant
attribute LTPE403_Supernatant units String unitless
variable LTPE26_Lysate String
attribute LTPE26_Lysate long_name String Ltpe26_lysate
attribute LTPE26_Lysate units String unitless
variable LTPE397_Lysate String
attribute LTPE397_Lysate long_name String Ltpe397_lysate
attribute LTPE397_Lysate units String unitless
variable LTPE403_Lysate String
attribute LTPE403_Lysate long_name String Ltpe403_lysate
attribute LTPE403_Lysate units String unitless
variable Amino_Acid_Metabolism String
attribute Amino_Acid_Metabolism long_name String Amino_acid_metabolism
attribute Amino_Acid_Metabolism units String unitless
variable Carbohydrate_Metabolism String
attribute Carbohydrate_Metabolism long_name String Carbohydrate_metabolism
attribute Carbohydrate_Metabolism units String unitless
variable Energy_Metabolism String
attribute Energy_Metabolism long_name String Energy_metabolism
attribute Energy_Metabolism units String unitless
variable Lipid_Metabolism String
attribute Lipid_Metabolism long_name String Lipid_metabolism
attribute Lipid_Metabolism units String unitless
variable Metabolism_of_Cofactors_and_Vitamins String
attribute Metabolism_of_Cofactors_and_Vitamins long_name String Metabolism_of_cofactors_and_vitamins
attribute Metabolism_of_Cofactors_and_Vitamins units String unitless
variable Metabolism_of_Other_Amino_Acids String
attribute Metabolism_of_Other_Amino_Acids long_name String Metabolism_of_other_amino_acids
attribute Metabolism_of_Other_Amino_Acids units String unitless
variable Nucleotide_Metabolism String
attribute Nucleotide_Metabolism long_name String Nucleotide_metabolism
attribute Nucleotide_Metabolism units String unitless
variable Signal_Transduction String
attribute Signal_Transduction long_name String Signal_transduction
attribute Signal_Transduction units String unitless
variable Other String
attribute Other long_name String Other
attribute Other units String unitless
variable Unknown String
attribute Unknown long_name String Unknown
attribute Unknown units String unitless

 
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