BCO-DMO ERDDAP
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Row Type Variable Name Attribute Name Data Type Value
attribute NC_GLOBAL cdm_data_type String Other
attribute NC_GLOBAL Conventions String COARDS, CF-1.6, ACDD-1.3
attribute NC_GLOBAL creator_email String info at bco-dmo.org
attribute NC_GLOBAL creator_name String BCO-DMO
attribute NC_GLOBAL creator_url String https://www.bco-dmo.org/ (external link)
attribute NC_GLOBAL doi String 10.26008/1912/bco-dmo.996942.1
attribute NC_GLOBAL Easternmost_Easting double 134.4766
attribute NC_GLOBAL geospatial_lat_max double 7.36722
attribute NC_GLOBAL geospatial_lat_min double 7.16162
attribute NC_GLOBAL geospatial_lat_units String degrees_north
attribute NC_GLOBAL geospatial_lon_max double 134.4766
attribute NC_GLOBAL geospatial_lon_min double 134.347
attribute NC_GLOBAL geospatial_lon_units String degrees_east
attribute NC_GLOBAL infoUrl String https://osprey.bco-dmo.org/dataset/996942 (external link)
attribute NC_GLOBAL institution String BCO-DMO
attribute NC_GLOBAL license String The data may be used and redistributed for free but is not intended\nfor legal use, since it may contain inaccuracies. Neither the data\nContributor, ERD, NOAA, nor the United States Government, nor any\nof their employees or contractors, makes any warranty, express or\nimplied, including warranties of merchantability and fitness for a\nparticular purpose, or assumes any legal liability for the accuracy,\ncompleteness, or usefulness, of this information.
attribute NC_GLOBAL Northernmost_Northing double 7.36722
attribute NC_GLOBAL sourceUrl String (local files)
attribute NC_GLOBAL Southernmost_Northing double 7.16162
attribute NC_GLOBAL summary String This dataset contains host genomic and associated microbiome sequence data generated to investigate patterns of cryptic lineage structure, symbiotic diversity, and microbial community composition in reef-building corals (Porites spp.) across environmental gradients. Samples were collected from three classic (typical temperatures) and three extreme (higher temperatures and light attenuation) reef sites in Palau, and processed using high-throughput sequencing approaches to characterize (1) host population genomic variation and (2) taxonomic  diversity of coral-associated microbial communities (Symbiodiniaceae and bacteria). Host genomic data were generated using a 2bRAD approach and analyzed to resolve lineage differentiation. Microbiome communities were characterized through amplicon sequencing, enabling assessment of microbial assemblages associated with distinct host lineages and environmental conditions.
attribute NC_GLOBAL title String [Cryptic Porites lineage genomic and microbiome data] - Host genome and microbiome sequencing data for Porites cryptic lineages in classic and extreme reefs in Palau in November 2021 (Collaborative Research: How do selection, plasticity, and dispersal interact to determine coral success in warmer and more variable environments?)
attribute NC_GLOBAL Westernmost_Easting double 134.347
variable Library_Name String
attribute Library_Name long_name String Library_name
attribute Library_Name units String unitless
variable latitude float
attribute latitude _CoordinateAxisType String Lat
attribute latitude actual_range float 7.16162, 7.36722
attribute latitude axis String Y
attribute latitude ioos_category String Location
attribute latitude long_name String Latitude
attribute latitude standard_name String latitude
attribute latitude units String degrees_north
variable longitude float
attribute longitude _CoordinateAxisType String Lon
attribute longitude actual_range float 134.347, 134.4766
attribute longitude axis String X
attribute longitude ioos_category String Location
attribute longitude long_name String Longitude
attribute longitude standard_name String longitude
attribute longitude units String degrees_east
variable Date String
attribute Date long_name String Date
attribute Date units String unitless
variable Study_Accession String
attribute Study_Accession long_name String Study_accession
attribute Study_Accession units String unitless
variable Host_genetic_dataset_accession String
attribute Host_genetic_dataset_accession long_name String Host_genetic_dataset_accession
attribute Host_genetic_dataset_accession units String unitless
variable Experiment_Accession String
attribute Experiment_Accession long_name String Experiment_accession
attribute Experiment_Accession units String unitless
variable Library_accession_2BRAD String
attribute Library_accession_2BRAD long_name String Library_accession_2brad
attribute Library_accession_2BRAD units String unitless
variable Microbial_community_data_accession String
attribute Microbial_community_data_accession long_name String Microbial_community_data_accession
attribute Microbial_community_data_accession units String unitless
variable ITS2_library_biosample String
attribute ITS2_library_biosample long_name String Its2_library_biosample
attribute ITS2_library_biosample units String unitless
variable ITS2_Forward String
attribute ITS2_Forward long_name String Its2_forward
attribute ITS2_Forward units String unitless
variable ITS2_Reverse String
attribute ITS2_Reverse long_name String Its2_reverse
attribute ITS2_Reverse units String unitless
variable Library_biosample_16S String
attribute Library_biosample_16S long_name String Library_biosample_16s
attribute Library_biosample_16S units String unitless
variable Forward_16S String
attribute Forward_16S long_name String Forward_16s
attribute Forward_16S units String unitless
variable Reverse_16S String
attribute Reverse_16S long_name String Reverse_16s
attribute Reverse_16S units String unitless

 
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