BCO-DMO ERDDAP
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Row Type Variable Name Attribute Name Data Type Value
attribute NC_GLOBAL cdm_data_type String Other
attribute NC_GLOBAL Conventions String COARDS, CF-1.6, ACDD-1.3
attribute NC_GLOBAL creator_email String info at bco-dmo.org
attribute NC_GLOBAL creator_name String BCO-DMO
attribute NC_GLOBAL creator_url String https://www.bco-dmo.org/ (external link)
attribute NC_GLOBAL doi String 10.26008/1912/bco-dmo.998297.1
attribute NC_GLOBAL Easternmost_Easting double -69.99714
attribute NC_GLOBAL geospatial_lat_max double 42.04647
attribute NC_GLOBAL geospatial_lat_min double 27.4575
attribute NC_GLOBAL geospatial_lat_units String degrees_north
attribute NC_GLOBAL geospatial_lon_max double -69.99714
attribute NC_GLOBAL geospatial_lon_min double -84.51061
attribute NC_GLOBAL geospatial_lon_units String degrees_east
attribute NC_GLOBAL infoUrl String https://osprey.bco-dmo.org/dataset/998297 (external link)
attribute NC_GLOBAL institution String BCO-DMO
attribute NC_GLOBAL license String The data may be used and redistributed for free but is not intended\nfor legal use, since it may contain inaccuracies. Neither the data\nContributor, ERD, NOAA, nor the United States Government, nor any\nof their employees or contractors, makes any warranty, express or\nimplied, including warranties of merchantability and fitness for a\nparticular purpose, or assumes any legal liability for the accuracy,\ncompleteness, or usefulness, of this information.
attribute NC_GLOBAL Northernmost_Northing double 42.04647
attribute NC_GLOBAL sourceUrl String (local files)
attribute NC_GLOBAL Southernmost_Northing double 27.4575
attribute NC_GLOBAL summary String The decorator worm Diopatra cuprea Bosc, 1802 (Annelid; Polychaete; Onuphidae) is an ecosystem engineer within high-salinity estuaries of the southern and eastern United States. A previous study revealed five morphologically cryptic mitochondrial lineages across its broad geographic distribution. We genotyped single-nucleotide polymorphisms (SNPs) with RADseq. \n\nThis dataset includes metadata, methods, links to published code and processed data used to generate figures for the results publication Ziegler et al. (2025,doi:10.1007/s00227-025-04613-8)  titled \"Multiple cryptic lineages and restricted gene flow in the decorator worm Diopatra cuprea.\" This dataset also includes genetic accession identifiers for sequence data contributed to the National Center for Biotechnology Information (NCBI)'s Sequence Read Archive (SRA), available under BioProject PRJNA1103840.
attribute NC_GLOBAL title String [Diopatra SNPs (SRA)] - Decorator worm Diopatra cuprea single nucleotide polymorphism (SNP) genotypes from collections in the Gulf of Mexico and eastern United States estuaries from 2009 to 2022 (The genetic legacy of an Asian oyster introduction and its disease-causing parasite)
attribute NC_GLOBAL Westernmost_Easting double -84.51061
variable year_collected int
attribute year_collected actual_range int 2009, 2022
attribute year_collected long_name String Year_collected
attribute year_collected units String unitless
variable sample_id String
attribute sample_id long_name String Sample_id
attribute sample_id units String unitless
variable pop_defined String
attribute pop_defined long_name String Pop_defined
attribute pop_defined units String unitless
variable geographic_location String
attribute geographic_location long_name String Geographic_location
attribute geographic_location units String unitless
variable state_name String
attribute state_name long_name String State_name
attribute state_name units String unitless
variable estuary_local String
attribute estuary_local long_name String Estuary_local
attribute estuary_local units String unitless
variable mt_haplotype String
attribute mt_haplotype long_name String Mt_haplotype
attribute mt_haplotype units String unitless
variable mt_hap_group String
attribute mt_hap_group long_name String Mt_hap_group
attribute mt_hap_group units String unitless
variable mt_hap_subgroup String
attribute mt_hap_subgroup long_name String Mt_hap_subgroup
attribute mt_hap_subgroup units String unitless
variable collector String
attribute collector long_name String Collector
attribute collector units String unitless
variable SRA_Run String
attribute SRA_Run long_name String Sra_run
attribute SRA_Run units String unitless
variable SRA_Study String
attribute SRA_Study long_name String Sra_study
attribute SRA_Study units String unitless
variable version int
attribute version actual_range int 1, 1
attribute version long_name String Version
attribute version units String unitless
variable BioSample String
attribute BioSample long_name String Biosample
attribute BioSample units String unitless
variable latitude float
attribute latitude _CoordinateAxisType String Lat
attribute latitude actual_range float 27.4575, 42.04647
attribute latitude axis String Y
attribute latitude ioos_category String Location
attribute latitude long_name String Site_lat
attribute latitude standard_name String latitude
attribute latitude units String degrees_north
variable longitude float
attribute longitude _CoordinateAxisType String Lon
attribute longitude actual_range float -84.51061, -69.99714
attribute longitude axis String X
attribute longitude ioos_category String Location
attribute longitude long_name String Site_lon
attribute longitude standard_name String longitude
attribute longitude units String degrees_east
variable sites_collector String
attribute sites_collector long_name String Sites_collector
attribute sites_collector units String unitless
variable Assay_Type String
attribute Assay_Type long_name String Assay_type
attribute Assay_Type units String unitless
variable AvgSpotLen int
attribute AvgSpotLen actual_range int 84, 86
attribute AvgSpotLen long_name String Avgspotlen
attribute AvgSpotLen units String count
variable Bases int
attribute Bases actual_range int 2039140, 596123063
attribute Bases long_name String Bases
attribute Bases units String count
variable BioProject String
attribute BioProject long_name String Bioproject
attribute BioProject units String unitless
variable BioSampleModel String
attribute BioSampleModel long_name String Biosamplemodel
attribute BioSampleModel units String unitless
variable Bytes int
attribute Bytes actual_range int 727391, 198421887
attribute Bytes long_name String Bytes
attribute Bytes units String bytes
variable Experiment String
attribute Experiment long_name String Experiment
attribute Experiment units String unitless
variable Instrument String
attribute Instrument long_name String Instrument
attribute Instrument units String unitless
variable isolate int
attribute isolate actual_range int 1, 233
attribute isolate long_name String Isolate
attribute isolate units String unitless
variable isolation_source String
attribute isolation_source long_name String Isolation_source
attribute isolation_source units String unitless
variable Library_Name int
attribute Library_Name actual_range int 1, 233
attribute Library_Name long_name String Library_name
attribute Library_Name units String unitless
variable LibraryLayout String
attribute LibraryLayout long_name String Librarylayout
attribute LibraryLayout units String unitless
variable LibrarySelection String
attribute LibrarySelection long_name String Libraryselection
attribute LibrarySelection units String unitless
variable LibrarySource String
attribute LibrarySource long_name String Librarysource
attribute LibrarySource units String unitless
variable Organism String
attribute Organism long_name String Organism
attribute Organism units String unitless
variable Platform String
attribute Platform long_name String Platform
attribute Platform units String unitless
variable tissue String
attribute tissue long_name String Tissue
attribute tissue units String unitless

 
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