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Dataset Title:  Zooplankton cubic meter count data collected in the 1-m2 MOCNESS during R/V
Albatross IV, R/V Endeavor and R/V Oceanus broadscale cruises in the Gulf of
Maine and Georges Bank from 1995-1999 and processed at GSO/URI (GB project)
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Institution:  BCO-DMO   (Dataset ID: bcodmo_dataset_2333)
Information:  Summary ? | License ? | ISO 19115 | Metadata | Background (external link) | Subset | Files | Make a graph
 
Variable ?   Optional
Constraint #1 ?
Optional
Constraint #2 ?
   Minimum ?
   or a List of Values ?
   Maximum ?
 
 cruiseid (text) ?          "AL9505"    "OC341"
 cruise_type (text) ?          "BSS"    "PRO"
 year_cruise_begin (unitless) ?          1995    1999
 month_cruise_begin (mm (01 to12)) ?          "01"    "11"
 day_cruise_begin (dd (01 to 31)) ?          "03"    "30"
 year_cruise_end (unitless) ?          1995    1999
 month_cruise_end (mm (01 to 12)) ?          "01"    "11"
 day_cruise_end (dd (01 to 31)) ?          "02"    "28"
 station (unitless) ?          1    85
 station_std (unitless) ?          1    68
 depth_w (Depth, meters) ?          28    2500
 event (unitless) ?          "AL00898.05"    "OC12197.55"
 inst (text) ?      
   - +  ?
 tow (unitless) ?          1    47
 latitude (degrees_north) ?          40.278    43.718
  < slider >
 longitude (degrees_east) ?          -69.76    -65.645
  < slider >
 year_utc_begin (unitless) ?          1995    1999
 month_utc_begin (mm (01 to 12)) ?          "01"    "11"
 day_utc_begin (dd (01 to 31)) ?          "01"    "31"
 time_utc_begin (HHMM) ?          "0000"    "2359"
 year_utc_end (unitless) ?          1995    1999
 month_utc_end (mm (01 to 12)) ?          "01"    "NaN"
 day_utc_end (dd (01 to 31)) ?          "01"    "NaN"
 time_utc_end (HHMM) ?          "0003"    "NaN"
 allsort_flag (unitless) ?          "n"    "y"
 net (unitless) ?          0    9
 vol_net (cubic meters) ?          0.89    3142.4
 depth (m) ?          0.0    522.0
  < slider >
 depth_end (Depth, meters) ?          0.0    505.0
 gearcode (text) ?          "1M1"    "P50"
 count_flag (text) ?          "Cal_only"    "none"
 counter (text) ?          "NaN"    "tr_2/7/96"
 taxon (text) ?          "Acartia_danae"    "Xanthocalanus_spp."
 taxon_code (unitless) ?          "3118030300"    "NaN"
 stage (text) ?          "m3_c1"    "m3_npl"
 count (unitless) ?          0.0    55020.0922
 
Server-side Functions ?
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The Dataset Attribute Structure (.das) for this Dataset

Attributes {
 s {
  cruiseid {
    String bcodmo_name "cruiseid";
    String description "Cruise Identifier. (e.g., AL9607, EN276, OC275)";
    String long_name "Cruiseid";
    String units "text";
  }
  cruise_type {
    String bcodmo_name "cruise_type";
    String description "Type of cruise.  BSS - Broad scale Survey; PRO - Process Cruise; MOR - Mooring Cruise";
    String long_name "Cruise Type";
    String units "text";
  }
  year_cruise_begin {
    Int16 _FillValue 32767;
    Int16 actual_range 1995, 1999;
    String bcodmo_name "year_start";
    String description "Year at start of cruise. in YYYY format";
    String long_name "Year Cruise Begin";
    String units "unitless";
  }
  month_cruise_begin {
    String bcodmo_name "month_start";
    String description "2-digit month when cruise began.";
    String long_name "Month Cruise Begin";
    String units "mm (01 to12)";
  }
  day_cruise_begin {
    String bcodmo_name "day_start";
    String description "2-digit day of month when cruise began.";
    String long_name "Day Cruise Begin";
    String units "dd (01 to 31)";
  }
  year_cruise_end {
    Int16 _FillValue 32767;
    Int16 actual_range 1995, 1999;
    String bcodmo_name "year_end";
    String description "Year when cruise ended. in YYYY format";
    String long_name "Year Cruise End";
    String units "unitless";
  }
  month_cruise_end {
    String bcodmo_name "month_end";
    String description "2-digit month when cruise ended.";
    String long_name "Month Cruise End";
    String units "mm (01 to 12)";
  }
  day_cruise_end {
    String bcodmo_name "day_end";
    String description "2-digit day of month when cruise ended.";
    String long_name "Day Cruise End";
    String units "dd (01 to 31)";
  }
  station {
    Byte _FillValue 127;
    Byte actual_range 1, 85;
    String bcodmo_name "station";
    String description "Consecutive station number during cruise.";
    String long_name "Station";
    String units "unitless";
  }
  station_std {
    Byte _FillValue 127;
    Byte actual_range 1, 68;
    String bcodmo_name "station_std";
    String description "Standard Broadscale station number.";
    String long_name "Station Std";
    String units "unitless";
  }
  depth_w {
    Int16 _FillValue 32767;
    Int16 actual_range 28, 2500;
    String bcodmo_name "depth_w";
    Float64 colorBarMaximum 8000.0;
    Float64 colorBarMinimum -8000.0;
    String colorBarPalette "TopographyDepth";
    String description "Water depth, in meters.";
    String long_name "Depth";
    String standard_name "depth";
    String units "meters";
  }
  event {
    String bcodmo_name "event";
    String description "Event or operation number.  Unique ID.";
    String long_name "Event";
    String nerc_identifier "https://vocab.nerc.ac.uk/collection/P01/current/EVTAGFL/";
    String units "unitless";
  }
  inst {
    String bcodmo_name "instrument";
    String description 
"Instrument used to collect or process data.
MOC1 - 1 meter square MOCNESS
Bongo - 61 cm diameter Bongo
Pump - zooplankton pump";
    String long_name "Inst";
    String units "text";
  }
  tow {
    Byte _FillValue 127;
    Byte actual_range 1, 47;
    String bcodmo_name "tow";
    String description "Tow or haul number.";
    String long_name "Tow";
    String units "unitless";
  }
  latitude {
    String _CoordinateAxisType "Lat";
    Float64 _FillValue NaN;
    Float64 actual_range 40.278, 43.718;
    String axis "Y";
    String bcodmo_name "lat_start";
    Float64 colorBarMaximum 90.0;
    Float64 colorBarMinimum -90.0;
    String description "Latitude at Beginning of measurement, in decimal degrees.  (south is negative)";
    String ioos_category "Location";
    String long_name "Latitude";
    String nerc_identifier "https://vocab.nerc.ac.uk/collection/P09/current/LATX/";
    String source_name "lat_begin";
    String standard_name "latitude";
    String units "degrees_north";
  }
  longitude {
    String _CoordinateAxisType "Lon";
    Float64 _FillValue NaN;
    Float64 actual_range -69.76, -65.645;
    String axis "X";
    String bcodmo_name "lon_start";
    Float64 colorBarMaximum 180.0;
    Float64 colorBarMinimum -180.0;
    String description "Longitude at Beginning of measurement, in decimal degrees.  (west is negative)";
    String ioos_category "Location";
    String long_name "Longitude";
    String nerc_identifier "https://vocab.nerc.ac.uk/collection/P09/current/LONX/";
    String source_name "lon_begin";
    String standard_name "longitude";
    String units "degrees_east";
  }
  year_utc_begin {
    Int16 _FillValue 32767;
    Int16 actual_range 1995, 1999;
    String bcodmo_name "year_start";
    String description "Year (UTC) at the beginning of the measurement. in YYYY format";
    String long_name "Year Utc Begin";
    String units "unitless";
  }
  month_utc_begin {
    String bcodmo_name "month_start";
    String description "2-digit month (UTC) at the beginning of the measurement.";
    String long_name "Month Utc Begin";
    String units "mm (01 to 12)";
  }
  day_utc_begin {
    String bcodmo_name "day_start";
    String description "2-digit day (UTC) at the beginning of the measurement.";
    String long_name "Day Utc Begin";
    String units "dd (01 to 31)";
  }
  time_utc_begin {
    String bcodmo_name "time_start";
    String description "Time (UTC) at the beginning of the measurement.";
    String long_name "Time Utc Begin";
    String units "HHMM";
  }
  year_utc_end {
    Int16 _FillValue 32767;
    Int16 actual_range 1995, 1999;
    String bcodmo_name "year_end";
    String description "Year (UTC) at the end of the measurement. in YYYY format";
    String long_name "Year Utc End";
    String units "unitless";
  }
  month_utc_end {
    String bcodmo_name "month_end";
    String description "2-digit month (UTC) at the end of the measurement.";
    String long_name "Month Utc End";
    String units "mm (01 to 12)";
  }
  day_utc_end {
    String bcodmo_name "day_end";
    String description "2-digit day (UTC) at the end of the measurement.";
    String long_name "Day Utc End";
    String units "dd (01 to 31)";
  }
  time_utc_end {
    String bcodmo_name "time_end";
    String description "Time (UTC) at the end of the measurement.";
    String long_name "Time Utc End";
    String units "HHMM";
  }
  allsort_flag {
    String bcodmo_name "flag";
    String description "Flag for sorting.  Default = 'n'.  When all nets for particular tow are sorted, flag = 'y'.";
    String long_name "Allsort Flag";
    String units "unitless";
  }
  net {
    Byte _FillValue 127;
    Byte actual_range 0, 9;
    String bcodmo_name "net";
    String description "Net number.";
    String long_name "Net";
    String units "unitless";
  }
  vol_net {
    Float32 _FillValue NaN;
    Float32 actual_range 0.89, 3142.4;
    String bcodmo_name "vol_filt";
    String description "Volume of water filtered by net, in cubic meters.";
    String long_name "Vol Net";
    String units "cubic meters";
  }
  depth {
    String _CoordinateAxisType "Height";
    String _CoordinateZisPositive "down";
    Float64 _FillValue NaN;
    Float64 actual_range 0.0, 522.0;
    String axis "Z";
    String bcodmo_name "depth_begin";
    Float64 colorBarMaximum 8000.0;
    Float64 colorBarMinimum -8000.0;
    String colorBarPalette "TopographyDepth";
    String description "Depth of sampler at beginning of measurement, meters.";
    String ioos_category "Location";
    String long_name "Depth";
    String positive "down";
    String standard_name "depth";
    String units "m";
  }
  depth_end {
    Float32 _FillValue NaN;
    Float32 actual_range 0.0, 505.0;
    String bcodmo_name "depth_end";
    Float64 colorBarMaximum 8000.0;
    Float64 colorBarMinimum -8000.0;
    String colorBarPalette "TopographyDepth";
    String description "Depth of sampler at end of measurement, meters.";
    String long_name "Depth";
    String standard_name "depth";
    String units "meters";
  }
  gearcode {
    String bcodmo_name "unknown";
    String description 
"Gear Code - used by NMFS. Three digit code that specifies gear and mesh size of net.
1M1 - 1 meter square MOCNESS, 150 um mesh
1m3 - 1 meter square MOCNESS, 335 um mesh
P35 - Pump, 35 um mesh
P50 - Pump, 50 um mesh
6B2 - 61 cm diameter Bongo, 200 um mesh
6B3 - 61 cm diameter Bongo, 335 um mesh";
    String long_name "Gearcode";
    String units "text";
  }
  count_flag {
    String bcodmo_name "flag";
    String description 
"Counting method flag for sorting.  Default = 'none'.
none = not sorted at present time
all = All species/taxa enumerated
Top_Five = 
Cal_only = only Calanus spp. counted
stemple = subsampled with Henson-Stemple pipette.  (Only Calanus finmarchicus counted.)";
    String long_name "Count Flag";
    String units "text";
  }
  counter {
    String bcodmo_name "investigator";
    String description "Initials of sorter and date sorted.";
    String long_name "Counter";
    String units "text";
  }
  taxon {
    String bcodmo_name "taxon";
    String description "Taxon name.";
    String long_name "Taxon";
    String units "text";
  }
  taxon_code {
    String bcodmo_name "taxon_code";
    String description "Taxonomic Code.  Ten digit number from NODC Taxonomic List, v.  8.";
    String long_name "Taxon Code";
    String units "unitless";
  }
  stage {
    String bcodmo_name "stage";
    String description 
"Taxon stage:
m3_fem = copepod females.
m3_mal = copepod males.
m3_cop = Total Copepodites.
m3_c1 = Copepodite stage 1 (C1).
m3_c2 = Copepodite stage 2 (C2).
m3_c3 = Copepodite stage 3 (C3).
m3_c4 = Copepodite stage 4 (C4).
m3_c5 = Copepodite stage 5 (C5).
m3_npl = Total Nauplii (N1-N6).
m3_n1 = Nauplius stage 1 (N1).
m3_n2 = Nauplius stage 2 (N2).
m3_n3 = Nauplius stage 3 (N3).
m3_n4 = Nauplius stage 4 (N4).
m3_n5 = Nauplius stage 5 (N5)
m3_n6 =Nauplius stage 6 (N6).
m3_not = non-copepod taxa.";
    String long_name "Stage";
    String units "text";
  }
  count {
    Float64 _FillValue NaN;
    Float64 actual_range 0.0, 55020.0922;
    String bcodmo_name "count";
    Float64 colorBarMaximum 100.0;
    Float64 colorBarMinimum 0.0;
    String description "Count of taxa per stage per cubic meter.";
    String long_name "Count";
    String units "unitless";
  }
 }
  NC_GLOBAL {
    String access_formats ".htmlTable,.csv,.json,.mat,.nc,.tsv,.esriCsv,.geoJson";
    String acquisition_description "\"\"";
    String awards_0_award_nid "54626";
    String awards_0_award_number "unknown GB NOAA";
    String awards_0_funder_name "National Oceanic and Atmospheric Administration";
    String awards_0_funding_acronym "NOAA";
    String awards_0_funding_source_nid "352";
    String awards_1_award_nid "55057";
    String awards_1_award_number "OCE-9313677";
    String awards_1_data_url "http://www.nsf.gov/awardsearch/showAward.do?AwardNumber=9313677";
    String awards_1_funder_name "NSF Division of Ocean Sciences";
    String awards_1_funding_acronym "NSF OCE";
    String awards_1_funding_source_nid "355";
    String awards_1_program_manager "Phillip R. Taylor";
    String awards_1_program_manager_nid "50451";
    String cdm_data_type "Other";
    String comment 
"Zooplankton cubic meter data - MOCNESS only 
 GSO/URI (T. Durbin) 
 Version: 05 Dec 2002  
 02 Oct 2012: BCO-DMO re-formatted data, adding the stage and count columns.";
    String Conventions "COARDS, CF-1.6, ACDD-1.3";
    String creator_email "info@bco-dmo.org";
    String creator_name "BCO-DMO";
    String creator_type "institution";
    String creator_url "https://www.bco-dmo.org/";
    String data_source "extract_data_as_tsv version 2.3  19 Dec 2019";
    String date_created "2009-11-25T14:58:09Z";
    String date_modified "2019-02-21T20:35:16Z";
    String defaultDataQuery "&amp;time&lt;now";
    String doi "10.1575/1912/bco-dmo.2333.1";
    Float64 Easternmost_Easting -65.645;
    Float64 geospatial_lat_max 43.718;
    Float64 geospatial_lat_min 40.278;
    String geospatial_lat_units "degrees_north";
    Float64 geospatial_lon_max -65.645;
    Float64 geospatial_lon_min -69.76;
    String geospatial_lon_units "degrees_east";
    Float64 geospatial_vertical_max 522.0;
    Float64 geospatial_vertical_min 0.0;
    String geospatial_vertical_positive "down";
    String geospatial_vertical_units "m";
    String history 
"2022-10-01T13:34:43Z (local files)
2022-10-01T13:34:43Z https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_2333.html";
    String infoUrl "https://www.bco-dmo.org/dataset/2333";
    String institution "BCO-DMO";
    String instruments_0_acronym "MOC1";
    String instruments_0_dataset_instrument_description "1 meter square MOCNESS";
    String instruments_0_dataset_instrument_nid "4103";
    String instruments_0_description "The Multiple Opening/Closing Net and Environmental Sensing System or MOCNESS is a family of net systems based on the Tucker Trawl principle. The MOCNESS-1 carries nine 1-m2 nets usually of 335 micrometer mesh and is intended for use with the macrozooplankton.  All nets are black to reduce contrast with the background.  A motor/toggle release assembly is mounted on the top portion of the frame and stainless steel cables with swaged fittings are used to attach the net bar to the toggle release.  A stepping motor in a pressure compensated case filled with oil turns the escapement crankshaft of the toggle release which sequentially releases the nets to an open then closed position on command from the surface. -- from the MOCNESS Operations Manual (1999 + 2003).";
    String instruments_0_instrument_external_identifier "https://vocab.nerc.ac.uk/collection/L22/current/NETT0097/";
    String instruments_0_instrument_name "MOCNESS1";
    String instruments_0_instrument_nid "437";
    String instruments_0_supplied_name "MOCNESS1";
    String keywords "allsort, allsort_flag, bco, bco-dmo, begin, biological, chemical, code, count, count_flag, counter, cruise, cruise_type, cruiseid, data, dataset, day, day_cruise_begin, day_cruise_end, day_utc_begin, day_utc_end, depth, depth_begin, depth_end, depth_w, dmo, end, erddap, event, flag, gearcode, inst, latitude, longitude, management, month, month_cruise_begin, month_cruise_end, month_utc_begin, month_utc_end, net, oceanography, office, preliminary, profiler, salinity, salinity-temperature-depth, stage, station, station_std, std, taxon, taxon_code, temperature, time, time_utc_begin, time_utc_end, tow, type, vol, vol_net, year, year_cruise_begin, year_cruise_end, year_utc_begin, year_utc_end";
    String license "https://www.bco-dmo.org/dataset/2333/license";
    String metadata_source "https://www.bco-dmo.org/api/dataset/2333";
    Float64 Northernmost_Northing 43.718;
    String param_mapping "{'2333': {'lon_begin': 'flag - longitude', 'depth_begin': 'flag - depth', 'lat_begin': 'flag - latitude'}}";
    String parameter_source "https://www.bco-dmo.org/mapserver/dataset/2333/parameters";
    String people_0_affiliation "University of Rhode Island";
    String people_0_affiliation_acronym "URI-GSO";
    String people_0_person_name "Dr Edward Durbin";
    String people_0_person_nid "50378";
    String people_0_role "Principal Investigator";
    String people_0_role_type "originator";
    String people_1_affiliation "University of Rhode Island";
    String people_1_affiliation_acronym "URI-GSO";
    String people_1_person_name "Ms Maria  C Casas";
    String people_1_person_nid "50391";
    String people_1_role "Scientist";
    String people_1_role_type "originator";
    String people_2_affiliation "University of Rhode Island";
    String people_2_affiliation_acronym "URI-GSO";
    String people_2_person_name "Ms Maria  C Casas";
    String people_2_person_nid "50391";
    String people_2_role "Technician";
    String people_2_role_type "related";
    String people_3_affiliation "Woods Hole Oceanographic Institution";
    String people_3_affiliation_acronym "WHOI";
    String people_3_person_name "Ms Dicky Allison";
    String people_3_person_nid "50382";
    String people_3_role "BCO-DMO Data Manager";
    String people_3_role_type "related";
    String project "GB";
    String projects_0_acronym "GB";
    String projects_0_description 
"The U.S. GLOBEC Georges Bank Program is a large multi- disciplinary multi-year oceanographic effort. The proximate goal is to understand the population dynamics of key species on the Bank - Cod, Haddock, and two species of zooplankton (Calanus finmarchicus and Pseudocalanus) - in terms of their coupling to the physical environment and in terms of their predators and prey. The ultimate goal is to be able to predict changes in the distribution and abundance of these species as a result of changes in their physical and biotic environment as well as to anticipate how their populations might respond to climate change.
The effort is substantial, requiring broad-scale surveys of the entire Bank, and process studies which focus both on the links between the target species and their physical environment, and the determination of fundamental aspects of these species' life history (birth rates, growth rates, death rates, etc).
Equally important are the modelling efforts that are ongoing which seek to provide realistic predictions of the flow field and which utilize the life history information to produce an integrated view of the dynamics of the populations.
The U.S. GLOBEC Georges Bank Executive Committee (EXCO) provides program leadership and effective communication with the funding agencies.";
    String projects_0_geolocation "Georges Bank, Gulf of Maine, Northwest Atlantic Ocean";
    String projects_0_name "U.S. GLOBEC Georges Bank";
    String projects_0_project_nid "2037";
    String projects_0_project_website "http://globec.whoi.edu/globec_program.html";
    String projects_0_start_date "1991-01";
    String publisher_name "Biological and Chemical Oceanographic Data Management Office (BCO-DMO)";
    String publisher_type "institution";
    String sourceUrl "(local files)";
    Float64 Southernmost_Northing 40.278;
    String standard_name_vocabulary "CF Standard Name Table v55";
    String subsetVariables "inst";
    String summary "Zooplankton cubic meter count data collected in the 1-m2 MOCNESS during R/V Albatross IV, R/V Endeavor and R/V Oceanus broadscale cruises in the Gulf of Maine and Georges Bank from 1995-1999 and processed at GSO/URI";
    String title "Zooplankton cubic meter count data collected in the 1-m2 MOCNESS during R/V Albatross IV, R/V Endeavor and R/V Oceanus broadscale cruises in the Gulf of Maine and Georges Bank from 1995-1999 and processed at GSO/URI (GB project)";
    String version "1";
    Float64 Westernmost_Easting -69.76;
    String xml_source "osprey2erddap.update_xml() v1.3";
  }
}

 

Using tabledap to Request Data and Graphs from Tabular Datasets

tabledap lets you request a data subset, a graph, or a map from a tabular dataset (for example, buoy data), via a specially formed URL. tabledap uses the OPeNDAP (external link) Data Access Protocol (DAP) (external link) and its selection constraints (external link).

The URL specifies what you want: the dataset, a description of the graph or the subset of the data, and the file type for the response.

Tabledap request URLs must be in the form
https://coastwatch.pfeg.noaa.gov/erddap/tabledap/datasetID.fileType{?query}
For example,
https://coastwatch.pfeg.noaa.gov/erddap/tabledap/pmelTaoDySst.htmlTable?longitude,latitude,time,station,wmo_platform_code,T_25&time>=2015-05-23T12:00:00Z&time<=2015-05-31T12:00:00Z
Thus, the query is often a comma-separated list of desired variable names, followed by a collection of constraints (e.g., variable<value), each preceded by '&' (which is interpreted as "AND").

For details, see the tabledap Documentation.


 
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