BCO-DMO ERDDAP
Accessing BCO-DMO data
log in    
Brought to you by BCO-DMO    

ERDDAP > tabledap > Data Access Form ?

Dataset Title:  Juvenile salmon diet from F/V Great Pacific, R/V Miller Freeman GP0108, GP0207-
01, MF0310 in the Coastal Gulf of Alaska, Northeast Pacific from 2001-2003 (NEP
project)
Subscribe RSS
Institution:  BCO-DMO   (Dataset ID: bcodmo_dataset_3030)
Information:  Summary ? | License ? | ISO 19115 | Metadata | Background (external link) | Files | Make a graph
 
Variable ?   Optional
Constraint #1 ?
Optional
Constraint #2 ?
   Minimum ?
 
   Maximum ?
 
 year (unitless) ?          2001    2003
 cruiseid (unitless) ?          "GP0108"    "MF0310"
 haul_id (unitless) ?          2001001    2003086
 sta_id (unitless) ?          "AC1"    "OC6"
 month_local (unitless) ?          "07"    "08"
 day_local (unitless) ?          "01"    "31"
 time_start_local (HHMM) ?          "0631"    "2230"
 yrday_local (unitless) ?          198.3243    219.6813
 latitude (degrees_north) ?          56.6725    60.0404
  < slider >
 longitude (degrees_east) ?          -155.2792    -137.1962
  < slider >
 distance_start (nautical miles) ?          0.0    109.3
 depth (m) ?          0.0    1056.0
  < slider >
 temp_start (degrees Celsius) ?          9.2    16.0
 time_end_local (HHMM) ?          "0701"    "NaN"
 lat_end (Latitude, decimal degrees) ?          56.636    60.0216
 lon_end (Longitude, decimal degrees) ?          -155.2438    -137.2728
 distance_end (unitless) ?          1.33    111.5
 depth_end (Depth, meters) ?          31.0    1000.0
 temp_end (degrees Celsius) ?          11.33    15.64
 habitat (unitless) ?          "Continental_Shelf"    "Offshore_of_Contin..."
 control_id (unitless) ?          2001100001    2003102236
 weight_wet (grams) ?          5    1716
 sex (M or F) ?          "M"    "NaN"
 name_common (unitless) ?          "Chum"    "Sockeye"
 species (Genus and Species) ?          "53"    "Oncorhynchus_nerka"
 pred_stom_wgt (grams) ?          0.0    3.91
 pred_full (unitless) ?          1    7
 prey_wgt (grams) ?          0.0    3.73
 prey_dig (unitless) ?          1    6
 prey_count (count) ?          0    5217
 prey_id_nodc (unitless) ?          "0"    "wood"
 prey_nodc_common_name (unitless) ?          "0"    "worm"
 comments_diet (unitless) ?          ".001g"    "~6mm_tl.;_<.001g"
 comments_haul (unitless) ?          "Codend_fell_off_of..."    "WP2/_3rd_wire_inop..."
 
Server-side Functions ?
 distinct() ?
? ("Hover here to see a list of options. Click on an option to select it.Hover here to see a list of options. Click on an option to select it.Hover here to see a list of options. Click on an option to select it.Hover here to see a list of options. Click on an option to select it.Hover here to see a list of options. Click on an option to select it.")

File type: (more info)

(Documentation / Bypass this form ? )
 
(Please be patient. It may take a while to get the data.)


 

The Dataset Attribute Structure (.das) for this Dataset

Attributes {
 s {
  year {
    Int16 _FillValue 32767;
    Int16 actual_range 2001, 2003;
    String bcodmo_name "year";
    String description "year of sample collection";
    String long_name "Year";
    String nerc_identifier "https://vocab.nerc.ac.uk/collection/P01/current/YEARXXXX/";
    String units "unitless";
  }
  cruiseid {
    String bcodmo_name "cruise_id";
    String description "cruise identifier";
    String long_name "Cruiseid";
    String units "unitless";
  }
  haul_id {
    Int32 _FillValue 2147483647;
    Int32 actual_range 2001001, 2003086;
    String bcodmo_name "haul identification";
    String description "First four numbers represent year, second four numbers represent haul number during year specified in first four numbers";
    String long_name "Haul Id";
    String units "unitless";
  }
  sta_id {
    String bcodmo_name "sta_id";
    String description "Abbreviation for transect name and station number along a particular transect.";
    String long_name "Sta Id";
    String units "unitless";
  }
  month_local {
    String bcodmo_name "month_local";
    String description "month, local time";
    String long_name "Month Local";
    String units "unitless";
  }
  day_local {
    String bcodmo_name "day_local";
    String description "day, local time";
    String long_name "Day Local";
    String units "unitless";
  }
  time_start_local {
    String bcodmo_name "time_start_local";
    String description "starting time of haul, local time , 24 hour clock";
    String long_name "Time Start Local";
    String units "HHMM";
  }
  yrday_local {
    Float32 _FillValue NaN;
    Float32 actual_range 198.3243, 219.6813;
    String bcodmo_name "yrday_local";
    String description "local day and decimal time, as 326.5 for the 326th day of the year, or November 22 at 1200 hours (noon)";
    String long_name "Yrday Local";
    String units "unitless";
  }
  latitude {
    String _CoordinateAxisType "Lat";
    Float64 _FillValue NaN;
    Float64 actual_range 56.6725, 60.0404;
    String axis "Y";
    String bcodmo_name "lat_start";
    Float64 colorBarMaximum 90.0;
    Float64 colorBarMinimum -90.0;
    String description "latitude at starting time of measurement (west is negative), in decimal degrees";
    String ioos_category "Location";
    String long_name "Latitude";
    String nerc_identifier "https://vocab.nerc.ac.uk/collection/P09/current/LATX/";
    String source_name "lat_start";
    String standard_name "latitude";
    String units "degrees_north";
  }
  longitude {
    String _CoordinateAxisType "Lon";
    Float64 _FillValue NaN;
    Float64 actual_range -155.2792, -137.1962;
    String axis "X";
    String bcodmo_name "lon_start";
    Float64 colorBarMaximum 180.0;
    Float64 colorBarMinimum -180.0;
    String description "longitude at starting time of measurement; in decimal degrees (negative denotes West)";
    String ioos_category "Location";
    String long_name "Longitude";
    String nerc_identifier "https://vocab.nerc.ac.uk/collection/P09/current/LONX/";
    String source_name "lon_start";
    String standard_name "longitude";
    String units "degrees_east";
  }
  distance_start {
    Float32 _FillValue NaN;
    Float32 actual_range 0.0, 109.3;
    String bcodmo_name "unknown";
    String description "distance from start of the transect?";
    String long_name "Distance Start";
    String units "nautical miles";
  }
  depth {
    String _CoordinateAxisType "Height";
    String _CoordinateZisPositive "down";
    Float64 _FillValue NaN;
    Float64 actual_range 0.0, 1056.0;
    String axis "Z";
    String bcodmo_name "depth_begin";
    Float64 colorBarMaximum 8000.0;
    Float64 colorBarMinimum -8000.0;
    String colorBarPalette "TopographyDepth";
    String description "depth at the start of the haul";
    String ioos_category "Location";
    String long_name "Depth";
    String positive "down";
    String standard_name "depth";
    String units "m";
  }
  temp_start {
    Float32 _FillValue NaN;
    Float32 actual_range 9.2, 16.0;
    String bcodmo_name "temperature";
    String description "water temperature at measurement depth";
    String long_name "Temp Start";
    String nerc_identifier "https://vocab.nerc.ac.uk/collection/P01/current/TEMPP901/";
    String units "degrees Celsius";
  }
  time_end_local {
    String bcodmo_name "time_end_local";
    String description "ending time of haul, local time , 24 hour clock";
    String long_name "Time End Local";
    String units "HHMM";
  }
  lat_end {
    Float32 _FillValue NaN;
    Float32 actual_range 56.636, 60.0216;
    String bcodmo_name "lat_end";
    Float64 colorBarMaximum 90.0;
    Float64 colorBarMinimum -90.0;
    String description "latitude at end time of measurement; in decimal degrees (negative denotes South)";
    String long_name "Latitude";
    String nerc_identifier "https://vocab.nerc.ac.uk/collection/P09/current/LATX/";
    String standard_name "latitude";
    String units "decimal degrees";
  }
  lon_end {
    Float32 _FillValue NaN;
    Float32 actual_range -155.2438, -137.2728;
    String bcodmo_name "lon_end";
    Float64 colorBarMaximum 180.0;
    Float64 colorBarMinimum -180.0;
    String description "longitude at end time of measurement; in decimal degrees (negative denotes West)";
    String long_name "Longitude";
    String nerc_identifier "https://vocab.nerc.ac.uk/collection/P09/current/LONX/";
    String standard_name "longitude";
    String units "decimal degrees";
  }
  distance_end {
    Float32 _FillValue NaN;
    Float32 actual_range 1.33, 111.5;
    String bcodmo_name "unknown";
    String description "distance along the transect at the end of the haul?";
    String long_name "Distance End";
    String units "unitless";
  }
  depth_end {
    Float32 _FillValue NaN;
    Float32 actual_range 31.0, 1000.0;
    String bcodmo_name "depth_end";
    Float64 colorBarMaximum 8000.0;
    Float64 colorBarMinimum -8000.0;
    String colorBarPalette "TopographyDepth";
    String description "depth at the end of the haul";
    String long_name "Depth";
    String standard_name "depth";
    String units "meters";
  }
  temp_end {
    Float32 _FillValue NaN;
    Float32 actual_range 11.33, 15.64;
    String bcodmo_name "temperature";
    String description "water temperature at measurement depth";
    String long_name "Temp End";
    String nerc_identifier "https://vocab.nerc.ac.uk/collection/P01/current/TEMPP901/";
    String units "degrees Celsius";
  }
  habitat {
    String bcodmo_name "unknown";
    String description "nearshore, shelf, slope, or offshore";
    String long_name "Habitat";
    String units "unitless";
  }
  control_id {
    Int32 _FillValue 2147483647;
    Int32 actual_range 2001100001, 2003102236;
    String bcodmo_name "sample";
    String description "First four numbers are year; following six numbers are individual fish identification numbers.";
    String long_name "Control Id";
    String nerc_identifier "https://vocab.nerc.ac.uk/collection/P02/current/ACYC/";
    String units "unitless";
  }
  weight_wet {
    Int16 _FillValue 32767;
    Int16 actual_range 5, 1716;
    String bcodmo_name "weight_g";
    String description "wet weight";
    String long_name "Weight Wet";
    String units "grams";
  }
  sex {
    String bcodmo_name "sex";
    String description "M = male; F = female";
    String long_name "Sex";
    String units "M or F";
  }
  name_common {
    String bcodmo_name "common_name";
    String description "common name: chum, pink or sockeye";
    String long_name "Name Common";
    String units "unitless";
  }
  species {
    String bcodmo_name "species";
    String description "genus and species name of the fish";
    String long_name "Species";
    String units "Genus and Species";
  }
  pred_stom_wgt {
    Float32 _FillValue NaN;
    Float32 actual_range 0.0, 3.91;
    String bcodmo_name "unknown";
    String description "predator stomach weight";
    String long_name "Pred Stom Wgt";
    String units "grams";
  }
  pred_full {
    Byte _FillValue 127;
    Byte actual_range 1, 7;
    String bcodmo_name "unknown";
    String description "Objective measure of how full the stomach was. (1 = least full, 7 = most full)";
    String long_name "Pred Full";
    String units "unitless";
  }
  prey_wgt {
    Float32 _FillValue NaN;
    Float32 actual_range 0.0, 3.73;
    String bcodmo_name "unknown";
    String description "prey weight";
    String long_name "Prey Wgt";
    String units "grams";
  }
  prey_dig {
    Byte _FillValue 127;
    Byte actual_range 1, 6;
    String bcodmo_name "unknown";
    String description "Objective measure of how digested prey in diet is (1 = most fresh; 5 = most digested)";
    String long_name "Prey Dig";
    String units "unitless";
  }
  prey_count {
    Int16 _FillValue 32767;
    Int16 actual_range 0, 5217;
    String bcodmo_name "unknown";
    Float64 colorBarMaximum 100.0;
    Float64 colorBarMinimum 0.0;
    String description "number of prey found in stomach contents";
    String long_name "Prey Count";
    String units "count";
  }
  prey_id_nodc {
    String bcodmo_name "taxon";
    String description "prey identification, NODC standard name";
    String long_name "Prey Id Nodc";
    String units "unitless";
  }
  prey_nodc_common_name {
    String bcodmo_name "common_name";
    String description "prey common name, using NODC standards";
    String long_name "Prey Nodc Common Name";
    String units "unitless";
  }
  comments_diet {
    String bcodmo_name "comment";
    String description "comments pertaining to the salmon stomach contents";
    String long_name "Comments Diet";
    String units "unitless";
  }
  comments_haul {
    String bcodmo_name "comment";
    String description "comments pertaining to the haul";
    String long_name "Comments Haul";
    String units "unitless";
  }
 }
  NC_GLOBAL {
    String access_formats ".htmlTable,.csv,.json,.mat,.nc,.tsv,.esriCsv,.geoJson";
    String acquisition_description 
"Fish samples were collected with a 198-m-long mid-water rope trawl with
hexagonal mesh wings and body, and a 1.2-cm mesh liner in the codend (Fig. 2,
Table 1). The rope trawl was towed at 3.5 to 5 kt, at or near surface, and had
a typical spread of 40-m horizontally and 14-m vertically. All tows lasted 30
minutes and covered 1.5 to 2.8 nautical miles. All fish sampling was done
during daylight hours. Sometimes this meant that salmon trawls preceded CTD
casts. For reference, sunrise occurred at 06:04 ADT and sunset at 22:27 ADT on
1 August 2003 at 58o N. Alaska Daylight Time (ADT) is 8 hours earlier than
Greenwich Mean Time (GMT).";
    String awards_0_award_nid "54767";
    String awards_0_award_number "OCE-0109078";
    String awards_0_data_url "http://www.nsf.gov/awardsearch/showAward.do?AwardNumber=0109078";
    String awards_0_funder_name "NSF Division of Ocean Sciences";
    String awards_0_funding_acronym "NSF OCE";
    String awards_0_funding_source_nid "355";
    String awards_0_program_manager "Phillip R. Taylor";
    String awards_0_program_manager_nid "50451";
    String awards_1_award_nid "55044";
    String awards_1_award_number "unknown NEP NOAA";
    String awards_1_funder_name "National Oceanic and Atmospheric Administration";
    String awards_1_funding_acronym "NOAA";
    String awards_1_funding_source_nid "352";
    String cdm_data_type "Other";
    String comment 
"salmon juvenile diet and haul info, 2001-2003 
  PI: E. Cokelet";
    String Conventions "COARDS, CF-1.6, ACDD-1.3";
    String creator_email "info@bco-dmo.org";
    String creator_name "BCO-DMO";
    String creator_type "institution";
    String creator_url "https://www.bco-dmo.org/";
    String data_source "extract_data_as_tsv version 2.3  19 Dec 2019";
    String date_created "2010-06-16T20:40:39Z";
    String date_modified "2020-01-20T17:51:14Z";
    String defaultDataQuery "&amp;time&lt;now";
    String doi "10.1575/1912/bco-dmo.3030.1";
    Float64 Easternmost_Easting -137.1962;
    Float64 geospatial_lat_max 60.0404;
    Float64 geospatial_lat_min 56.6725;
    String geospatial_lat_units "degrees_north";
    Float64 geospatial_lon_max -137.1962;
    Float64 geospatial_lon_min -155.2792;
    String geospatial_lon_units "degrees_east";
    Float64 geospatial_vertical_max 1056.0;
    Float64 geospatial_vertical_min 0.0;
    String geospatial_vertical_positive "down";
    String geospatial_vertical_units "m";
    String history 
"2022-08-17T22:20:03Z (local files)
2022-08-17T22:20:03Z https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3030.html";
    String infoUrl "https://www.bco-dmo.org/dataset/3030";
    String institution "BCO-DMO";
    String instruments_0_acronym "TrawlMid";
    String instruments_0_dataset_instrument_description "Fish samples were collected using a midwater rope trawl, which is  198-m long, has hexagonal mesh in wings and body, and has a 1.2-cm mesh  liner in the codend. The rope trawl was towed at 3.5 to 5 kt, at or near surface, and had a  typical spread of 40-m horizontally and 14-m vertically. All tows lasted  30 minutes and covered 1.5 to 2.8 nautical miles. All fish sampling was  done during daylight hours.";
    String instruments_0_dataset_instrument_nid "5393";
    String instruments_0_description 
"A mid-water or pelagic trawl is a net towed at a chosen depth in the water column to catch schooling fish such as herring and mackerel.  Midwater trawl nets have very large front openings to herd schooling fish toward the back end where they become trapped in the narrow \"broiler\".  The sides of the deployed net are spread horizontally with two large metal foils, called \"doors,\" positioned in front of the net. As the trawler moves forward, the doors, and therefore the net, are forced outward, keeping the net open.
This instrument designation is used when specific make and model are not known.";
    String instruments_0_instrument_external_identifier "https://vocab.nerc.ac.uk/collection/L05/current/23/";
    String instruments_0_instrument_name "Midwater Trawl";
    String instruments_0_instrument_nid "467";
    String instruments_0_supplied_name "Midwater Trawl";
    String keywords "bco, bco-dmo, biological, center, chemical, comments, comments_diet, comments_haul, common, control, control_id, count, cruiseid, data, dataset, day, day_local, depth, depth_end, depth_start, diet, dig, distance, distance_end, distance_start, dmo, end, erddap, full, habitat, haul, haul_id, lat_end, latitude, local, lon_end, longitude, management, month, month_local, name, name_common, national, ncei, nesdis, noaa, nodc, oceanographic, oceanography, office, pred, pred_full, pred_stom_wgt, preliminary, prey, prey_count, prey_dig, prey_id_nodc, prey_nodc_common_name, prey_wgt, sex, species, sta, sta_id, start, stom, temp_end, temp_start, temperature, time, time_end_local, time_start_local, weight, weight_wet, wet, wgt, year, yrday, yrday_local";
    String license "https://www.bco-dmo.org/dataset/3030/license";
    String metadata_source "https://www.bco-dmo.org/api/dataset/3030";
    Float64 Northernmost_Northing 60.0404;
    String param_mapping "{'3030': {'depth_start': 'flag - depth', 'lon_start': 'flag - longitude', 'lat_start': 'flag - latitude'}}";
    String parameter_source "https://www.bco-dmo.org/mapserver/dataset/3030/parameters";
    String people_0_affiliation "National Oceanic and Atmospheric Administration";
    String people_0_affiliation_acronym "NOAA-PMEL";
    String people_0_person_name "Dr Edward  D. Cokelet";
    String people_0_person_nid "50466";
    String people_0_role "Principal Investigator";
    String people_0_role_type "originator";
    String people_1_affiliation "National Oceanic and Atmospheric Administration - Alaska Fisheries Science Center";
    String people_1_affiliation_acronym "NOAA-AFSC-Auke";
    String people_1_person_name "Dr Edward  V. Farley";
    String people_1_person_nid "50465";
    String people_1_role "Co-Principal Investigator";
    String people_1_role_type "originator";
    String people_2_affiliation "National Oceanic and Atmospheric Administration - Alaska Fisheries Science Center";
    String people_2_affiliation_acronym "NOAA-AFSC-Auke";
    String people_2_person_name "Dr Alex  C Wertheimer";
    String people_2_person_nid "51053";
    String people_2_role "Co-Principal Investigator";
    String people_2_role_type "originator";
    String people_3_affiliation "University of Washington";
    String people_3_affiliation_acronym "UW";
    String people_3_person_name "Dr Jamal  Hasan Moss";
    String people_3_person_nid "50467";
    String people_3_role "Scientist";
    String people_3_role_type "originator";
    String people_4_affiliation "National Oceanic and Atmospheric Administration - Alaska Fisheries Science Center";
    String people_4_affiliation_acronym "NOAA-AFSC-Auke";
    String people_4_person_name "Dr Jamal  Hasan Moss";
    String people_4_person_nid "50467";
    String people_4_role "Scientist";
    String people_4_role_type "originator";
    String people_5_affiliation "University of Washington";
    String people_5_affiliation_acronym "UW";
    String people_5_person_name "Dr Jamal  Hasan Moss";
    String people_5_person_nid "50467";
    String people_5_role "Contact";
    String people_5_role_type "related";
    String people_6_affiliation "National Oceanic and Atmospheric Administration - Alaska Fisheries Science Center";
    String people_6_affiliation_acronym "NOAA-AFSC-Auke";
    String people_6_person_name "Dr Jamal  Hasan Moss";
    String people_6_person_nid "50467";
    String people_6_role "Contact";
    String people_6_role_type "related";
    String people_7_affiliation "Woods Hole Oceanographic Institution";
    String people_7_affiliation_acronym "WHOI BCO-DMO";
    String people_7_person_name "Nancy Copley";
    String people_7_person_nid "50396";
    String people_7_role "BCO-DMO Data Manager";
    String people_7_role_type "related";
    String project "NEP";
    String projects_0_acronym "NEP";
    String projects_0_description 
"Program in a Nutshell
Goal:  To understand the effects of climate variability and climate change on the distribution, abundance and production of marine animals (including commercially important living marine resources) in the eastern North Pacific. To embody this understanding in diagnostic and prognostic ecosystem models, capable of capturing the ecosystem response to major climatic fluctuations.
Approach: To study the effects of past and present climate variability on the population ecology and population dynamics of marine biota and living marine resources, and to use this information as a proxy for how the ecosystems of the eastern North Pacific may respond to future global climate change. The strong temporal variability in the physical and biological signals of the NEP will be used to examine the biophysical mechanisms through which zooplankton and salmon populations respond to physical forcing and biological interactions in the coastal regions of the two gyres. Annual and interannual variability will be studied directly through long-term observations and detailed process studies; variability at longer time scales will be examined through retrospective analysis of directly measured and proxy data. Coupled biophysical models of the ecosystems of these regions will be developed and tested using the process studies and data collected from the long-term observation programs, then further tested and improved by hindcasting selected retrospective data series.";
    String projects_0_geolocation "Northeast Pacific Ocean, Gulf of Alaska";
    String projects_0_name "U.S. GLOBEC Northeast Pacific";
    String projects_0_project_nid "2038";
    String projects_0_project_website "http://nepglobec.bco-dmo.org";
    String projects_0_start_date "1997-01";
    String publisher_name "Biological and Chemical Oceanographic Data Management Office (BCO-DMO)";
    String publisher_type "institution";
    String sourceUrl "(local files)";
    Float64 Southernmost_Northing 56.6725;
    String standard_name_vocabulary "CF Standard Name Table v55";
    String summary "Juvenile salmon diet from F/V Great Pacific, R/V Miller Freeman GP0108, GP0207-01, MF0310 in the Coastal Gulf of Alaska, Northeast Pacific from 2001-2003.";
    String title "Juvenile salmon diet from F/V Great Pacific, R/V Miller Freeman GP0108, GP0207-01, MF0310 in the Coastal Gulf of Alaska, Northeast Pacific from 2001-2003 (NEP project)";
    String version "1";
    Float64 Westernmost_Easting -155.2792;
    String xml_source "osprey2erddap.update_xml() v1.3";
  }
}

 

Using tabledap to Request Data and Graphs from Tabular Datasets

tabledap lets you request a data subset, a graph, or a map from a tabular dataset (for example, buoy data), via a specially formed URL. tabledap uses the OPeNDAP (external link) Data Access Protocol (DAP) (external link) and its selection constraints (external link).

The URL specifies what you want: the dataset, a description of the graph or the subset of the data, and the file type for the response.

Tabledap request URLs must be in the form
https://coastwatch.pfeg.noaa.gov/erddap/tabledap/datasetID.fileType{?query}
For example,
https://coastwatch.pfeg.noaa.gov/erddap/tabledap/pmelTaoDySst.htmlTable?longitude,latitude,time,station,wmo_platform_code,T_25&time>=2015-05-23T12:00:00Z&time<=2015-05-31T12:00:00Z
Thus, the query is often a comma-separated list of desired variable names, followed by a collection of constraints (e.g., variable<value), each preceded by '&' (which is interpreted as "AND").

For details, see the tabledap Documentation.


 
ERDDAP, Version 2.02
Disclaimers | Privacy Policy | Contact