Accessing BCO-DMO data
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| Dataset Title: | [bottle] - Niskin bottle data, including salinity, O2, temperature, conductivity, etc, from R/V Knorr cruise KN207-03 in the North Atlantic (transect from Ponta Delgada, Azores to Reykjavik, Iceland) in 2012 (NA-VICE project) (Lipid lubrication of oceanic carbon and sulfur biogeochemistry via a host-virus chemical arms race) 
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| Institution: | BCO-DMO (Dataset ID: bcodmo_dataset_3902) |
| Information: | Summary
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| FGDC
| ISO 19115
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Attributes {
s {
cast {
Byte _FillValue 127;
String _Unsigned "false";
Byte actual_range 1, 98;
String bcodmo_name "cast";
String description "CTD cast number.";
String long_name "Cast";
String units "dimensionless";
}
date_gmt {
Int32 _FillValue 2147483647;
Int32 actual_range 20120616, 20120710;
String bcodmo_name "date_begin";
String description "Date (GMT) at the start of the CTD cast in YYYYmmdd format.";
String long_name "Date Gmt";
String units "dimensionless";
}
time_start {
String bcodmo_name "time_start";
String description "Time (GMT) at start of the CTD cast in HHMM format (seconds have been rounded to the nearest minute).";
String long_name "Time Start";
String units "dimensionless";
}
latitude {
String _CoordinateAxisType "Lat";
Float64 _FillValue NaN;
Float64 actual_range 40.6573, 63.3478;
String axis "Y";
String bcodmo_name "lat_start";
Float64 colorBarMaximum 90.0;
Float64 colorBarMinimum -90.0;
String description "Latitude in decimal degrees at start of CTD cast; negative = South.";
String ioos_category "Location";
String long_name "Latitude";
String nerc_identifier "https://vocab.nerc.ac.uk/collection/P09/current/LATX/";
String source_name "lat_start";
String standard_name "latitude";
String units "degrees_north";
}
longitude {
String _CoordinateAxisType "Lon";
Float64 _FillValue NaN;
Float64 actual_range -35.0738, -26.4407;
String axis "X";
String bcodmo_name "lon_start";
Float64 colorBarMaximum 180.0;
Float64 colorBarMinimum -180.0;
String description "Longitude in decimal degrees at start of CTD cast; negative = West.";
String ioos_category "Location";
String long_name "Longitude";
String nerc_identifier "https://vocab.nerc.ac.uk/collection/P09/current/LONX/";
String source_name "lon_start";
String standard_name "longitude";
String units "degrees_east";
}
bottle {
Byte _FillValue 127;
String _Unsigned "false";
Byte actual_range 1, 24;
String bcodmo_name "bottle";
String description "Niskin bottle number. Originally named 'Bottle Position'.";
String long_name "Bottle";
String units "unitless";
}
time_gmt {
String bcodmo_name "time_gmt";
String description "Time (GMT) the bottle was fired. In hours, minutes, and decimal minutes; 24-hour clock.";
String long_name "Time Gmt";
String units "HHMM.mm";
}
press_avg {
Float32 _FillValue NaN;
Float32 actual_range 1.173, 2542.84;
String bcodmo_name "pressure";
String description "Average pressure. Column originally named 'PrDM'.";
String long_name "Press Avg";
String nerc_identifier "https://vocab.nerc.ac.uk/collection/P01/current/PRESPR01/";
String units "decibars";
}
press_sd {
Float32 _FillValue NaN;
Float32 actual_range 0.0, 1.107;
String bcodmo_name "unknown";
Float64 colorBarMaximum 50.0;
Float64 colorBarMinimum 0.0;
String description "Standard deviation of press_avg.";
String long_name "Press Sd";
String units "decibars";
}
press_min {
Float32 _FillValue NaN;
Float32 actual_range 0.415, 2542.623;
String bcodmo_name "pressure";
String description "Minimum pressure.";
String long_name "Press Min";
String nerc_identifier "https://vocab.nerc.ac.uk/collection/P01/current/PRESPR01/";
String units "decibars";
}
press_max {
Float32 _FillValue NaN;
Float32 actual_range 1.57, 2543.293;
String bcodmo_name "pressure";
String description "Maximum pressure.";
String long_name "Press Max";
String nerc_identifier "https://vocab.nerc.ac.uk/collection/P01/current/PRESPR01/";
String units "decibars";
}
depth {
String _CoordinateAxisType "Height";
String _CoordinateZisPositive "down";
Float64 _FillValue NaN;
Float64 actual_range 1.162, 2503.232;
String axis "Z";
String bcodmo_name "depth";
Float64 colorBarMaximum 8000.0;
Float64 colorBarMinimum -8000.0;
String colorBarPalette "TopographyDepth";
String description "Average depth. Column originally named 'DepSM'.";
String ioos_category "Location";
String long_name "Depth";
String nerc_identifier "https://vocab.nerc.ac.uk/collection/P09/current/DEPH/";
String positive "down";
String standard_name "depth";
String units "m";
}
depth_sd {
Float32 _FillValue NaN;
Float32 actual_range 0.0, 1.085;
String bcodmo_name "unknown";
Float64 colorBarMaximum 50.0;
Float64 colorBarMinimum 0.0;
String description "Standard deviation of depth_avg.";
String long_name "Depth";
String standard_name "depth";
String units "meters";
}
depth_min {
Float32 _FillValue NaN;
Float32 actual_range 0.411, 2503.02;
String bcodmo_name "depth_min";
Float64 colorBarMaximum 8000.0;
Float64 colorBarMinimum -8000.0;
String colorBarPalette "TopographyDepth";
String description "Minimum depth.";
String long_name "Depth";
String standard_name "depth";
String units "meters";
}
depth_max {
Float32 _FillValue NaN;
Float32 actual_range 1.555, 2503.676;
String bcodmo_name "depth_max";
Float64 colorBarMaximum 8000.0;
Float64 colorBarMinimum -8000.0;
String colorBarPalette "TopographyDepth";
String description "Maximum depth.";
String long_name "Depth";
String standard_name "depth";
String units "meters";
}
potemp {
Float32 _FillValue NaN;
Float32 actual_range 2.4717, 17.7739;
String bcodmo_name "potemp";
String description "Potential temperature from primary sensor. Originally named 'Potemp090C'.";
String long_name "Potemp";
String nerc_identifier "https://vocab.nerc.ac.uk/collection/P01/current/POTMCV01/";
String units "degrees C";
}
potemp2 {
Float32 _FillValue NaN;
Float32 actual_range 2.4709, 17.7737;
String bcodmo_name "potential temperature 2";
String description "Potential temperature from secondary sensor. Originally named 'Potemp190C'.";
String long_name "Potemp2";
String units "degrees C";
}
sal {
Float32 _FillValue NaN;
Float32 actual_range 34.6836, 36.8915;
String bcodmo_name "sal";
String description "Salinity from the primary sensor. Originally named 'Sal00'.";
String long_name "Sal";
String nerc_identifier "https://vocab.nerc.ac.uk/collection/P01/current/PSALST01/";
String units "PSU";
}
sal2 {
Float32 _FillValue NaN;
Float32 actual_range 33.9517, 36.0394;
String bcodmo_name "sal2";
String description "Salinity from the secondary sensor. Originally named 'Sal11'.";
String long_name "Sal2";
String units "PSU";
}
O2 {
Float32 _FillValue NaN;
Float32 actual_range 3.94656, 7.64938;
String bcodmo_name "dissolved Oxygen";
String description "Oxygen in milliliters per liter measured by the SBE 43. Originally named 'Sbeox0ML/L'.";
String long_name "O2";
String units "mL/L";
}
O2_sat_pcnt {
Float64 _FillValue NaN;
Float64 actual_range 61.28048, 117.60087;
String bcodmo_name "O2_sat_pcnt";
String description "Percent oxygen saturation. Originally named 'Sbeox0PS'.";
String long_name "O2 Sat Pcnt";
String nerc_identifier "https://vocab.nerc.ac.uk/collection/P01/current/OXYSZZ01/";
String units "%";
}
sigma_0 {
Float32 _FillValue NaN;
Float32 actual_range 26.0542, 28.7879;
String bcodmo_name "sigma_0";
String description "Density, sigma-theta, in kilograms per cubic meter from primary sensor. Originally named 'Sigma_e00'.";
String long_name "Sigma 0";
String nerc_identifier "https://vocab.nerc.ac.uk/collection/P01/current/SIGTPR01/";
String units "kg/m^3";
}
sigma_0_2 {
Float32 _FillValue NaN;
Float32 actual_range 25.8902, 27.8769;
String bcodmo_name "sigma_0";
String description "Density, sigma-theta, in kilograms per cubic meter from secondary sensor. Originally named 'Sigma-e11'.";
String long_name "Sigma 0 2";
String nerc_identifier "https://vocab.nerc.ac.uk/collection/P01/current/SIGTPR01/";
String units "kg/m^3";
}
sigma_t {
Float32 _FillValue NaN;
Float32 actual_range 26.054, 28.7877;
String bcodmo_name "sigma-t";
String description "Sigma-t density from primary sensor. Originally named 'Sigma-t00'.";
String long_name "Sigma T";
String nerc_identifier "https://vocab.nerc.ac.uk/collection/P01/current/SIGTEQST/";
String units "kg/m^3";
}
sigma_t_2 {
Float32 _FillValue NaN;
Float32 actual_range 25.8895, 27.8583;
String bcodmo_name "sigma-t";
String description "Sigma-t density from secondary sensor. Originally named 'Sigma-t11'.";
String long_name "Sigma T 2";
String nerc_identifier "https://vocab.nerc.ac.uk/collection/P01/current/SIGTEQST/";
String units "kg/m^3";
}
temp_avg {
Float32 _FillValue NaN;
Float32 actual_range 2.6696, 17.7757;
String bcodmo_name "temperature";
String description "Average temperature from primary sensor. Column originally named 'T090C'.";
String long_name "Temp Avg";
String nerc_identifier "https://vocab.nerc.ac.uk/collection/P01/current/TEMPP901/";
String units "degrees C";
}
temp_sd {
Float32 _FillValue NaN;
Float32 actual_range 0.0, 1.1504;
String bcodmo_name "unknown";
Float64 colorBarMaximum 50.0;
Float64 colorBarMinimum 0.0;
String description "Standard deviation of temp_avg.";
String long_name "Temp Sd";
String units "degrees C";
}
temp_min {
Float32 _FillValue NaN;
Float32 actual_range 2.6691, 17.7752;
String bcodmo_name "temperature";
String description "Minimum temperature from primary sensor.";
String long_name "Temp Min";
String nerc_identifier "https://vocab.nerc.ac.uk/collection/P01/current/TEMPP901/";
String units "degrees C";
}
temp_max {
Float32 _FillValue NaN;
Float32 actual_range 2.6703, 17.7761;
String bcodmo_name "temperature";
String description "Maximum temperature from primary sensor.";
String long_name "Temp Max";
String nerc_identifier "https://vocab.nerc.ac.uk/collection/P01/current/TEMPP901/";
String units "degrees C";
}
temp2_avg {
Float32 _FillValue NaN;
Float32 actual_range 2.6688, 17.7755;
String bcodmo_name "temp2";
String description "Average temperature from secondary sensor. Column originally named 'T190C'.";
String long_name "Temp2 Avg";
String nerc_identifier "https://vocab.nerc.ac.uk/collection/P01/current/TEMPS601/";
String units "degrees C";
}
temp2_sd {
Float32 _FillValue NaN;
Float32 actual_range 0.0, 1.2606;
String bcodmo_name "unknown";
Float64 colorBarMaximum 50.0;
Float64 colorBarMinimum 0.0;
String description "Standard deviation of temp2_avg.";
String long_name "Temp2 Sd";
String units "degrees C";
}
temp2_min {
Float32 _FillValue NaN;
Float32 actual_range 2.6676, 17.7753;
String bcodmo_name "temp2";
String description "Minimum temperature from secondary sensor.";
String long_name "Temp2 Min";
String nerc_identifier "https://vocab.nerc.ac.uk/collection/P01/current/TEMPS601/";
String units "degrees C";
}
temp2_max {
Float32 _FillValue NaN;
Float32 actual_range 2.6694, 17.7758;
String bcodmo_name "temp2";
String description "Maximum temperature from secondary sensor.";
String long_name "Temp2 Max";
String nerc_identifier "https://vocab.nerc.ac.uk/collection/P01/current/TEMPS601/";
String units "degrees C";
}
cond_avg {
Float32 _FillValue NaN;
Float32 actual_range 3.237728, 4.68627;
String bcodmo_name "conductivity";
String description "Average conductivity in Siemens per meter from primary sensor. Column originally named 'C0S/m'.";
String long_name "Cond Avg";
String nerc_identifier "https://vocab.nerc.ac.uk/collection/P02/current/CNDC/";
String units "S/m";
}
cond_sd {
Float32 _FillValue NaN;
Float32 actual_range 0.0, 0.106518;
String bcodmo_name "unknown";
Float64 colorBarMaximum 50.0;
Float64 colorBarMinimum 0.0;
String description "Standard deviation of cond_avg.";
String long_name "Cond Sd";
String units "S/m";
}
cond_min {
Float32 _FillValue NaN;
Float32 actual_range 3.237637, 4.686055;
String bcodmo_name "conductivity";
String description "Minimum conductivity from primary sensor.";
String long_name "Cond Min";
String nerc_identifier "https://vocab.nerc.ac.uk/collection/P02/current/CNDC/";
String units "S/m";
}
cond_max {
Float32 _FillValue NaN;
Float32 actual_range 3.237833, 4.686488;
String bcodmo_name "conductivity";
String description "Maximum conductivity from primary sensor.";
String long_name "Cond Max";
String nerc_identifier "https://vocab.nerc.ac.uk/collection/P02/current/CNDC/";
String units "S/m";
}
cond2_avg {
Float32 _FillValue NaN;
Float32 actual_range 3.237556, 4.686171;
String bcodmo_name "cond2";
String description "Average conductivity in Siemens per meter from secondary sensor. Column originally named 'C1S/m'.";
String long_name "Cond2 Avg";
String nerc_identifier "https://vocab.nerc.ac.uk/collection/P02/current/CNDC/";
String units "S/m";
}
cond2_sd {
Float32 _FillValue NaN;
Float32 actual_range 0.0, 0.115792;
String bcodmo_name "unknown";
Float64 colorBarMaximum 50.0;
Float64 colorBarMinimum 0.0;
String description "Standard deviation of cond2_avg.";
String long_name "Cond2 Sd";
String units "S/m";
}
cond2_min {
Float32 _FillValue NaN;
Float32 actual_range 3.237439, 4.685475;
String bcodmo_name "cond2";
String description "Minimum conductivity from secondary sensor.";
String long_name "Cond2 Min";
String nerc_identifier "https://vocab.nerc.ac.uk/collection/P02/current/CNDC/";
String units "S/m";
}
cond2_max {
Float32 _FillValue NaN;
Float32 actual_range 3.237619, 4.686313;
String bcodmo_name "cond2";
String description "Maximum conductivity from secondary sensor.";
String long_name "Cond2 Max";
String nerc_identifier "https://vocab.nerc.ac.uk/collection/P02/current/CNDC/";
String units "S/m";
}
O2_v_avg {
Float32 _FillValue NaN;
Float32 actual_range 1.5439, 2.6671;
String bcodmo_name "O2_v";
String description "Average raw oxygen reading from the SBE 43. Column originally named 'Sbeox0V'.";
String long_name "O2 V Avg";
String units "volts";
}
O2_v_sd {
Float32 _FillValue NaN;
Float32 actual_range 0.0, 0.5206;
String bcodmo_name "unknown";
Float64 colorBarMaximum 50.0;
Float64 colorBarMinimum 0.0;
String description "Standard deviation of O2_v_avg.";
String long_name "O2 V Sd";
String units "volts";
}
O2_v_min {
Float32 _FillValue NaN;
Float32 actual_range -7.0e-4, 2.6633;
String bcodmo_name "O2_v";
String description "Minimum raw oxygen reading from the SBE 43.";
String long_name "O2 V Min";
String units "volts";
}
O2_v_max {
Float32 _FillValue NaN;
Float32 actual_range 1.5449, 2.6707;
String bcodmo_name "O2_v";
String description "Maximum raw oxygen reading from the SBE 43.";
String long_name "O2 V Max";
String units "O2_v_max";
}
trans_avg {
Float32 _FillValue NaN;
Float32 actual_range 80.659, 100.8265;
String bcodmo_name "transmission";
String description "Average beam transmission from Chelsea/Seatech/WET Labs CStar. Column originally named 'Xmiss'.";
String long_name "Trans Avg";
String units "%";
}
trans_sd {
Float32 _FillValue NaN;
Float32 actual_range 0.0, 23.4907;
String bcodmo_name "unknown";
Float64 colorBarMaximum 50.0;
Float64 colorBarMinimum 0.0;
String description "Standard deviation of trans_avg.";
String long_name "Trans Sd";
String units "%";
}
trans_min {
Float32 _FillValue NaN;
Float32 actual_range -0.1537, 100.7927;
String bcodmo_name "transmission";
String description "Minimum beam transmission from Chelsea/Seatech/WET Labs CStar.";
String long_name "Trans Min";
String units "%";
}
trans_max {
Float32 _FillValue NaN;
Float32 actual_range 80.7937, 100.8441;
String bcodmo_name "transmission";
String description "Maximum beam transmission from Chelsea/Seatech/WET Labs CStar.";
String long_name "Trans Max";
String units "%";
}
beam_c_avg {
Float32 _FillValue NaN;
Float32 actual_range -0.0329, 3.1951;
String bcodmo_name "beam_c";
String description "Average beam attenuation from Chelsea/Seatech/WET Labs CStar (in inverse meters). Column originally named 'Bat'.";
String long_name "Beam C Avg";
String nerc_identifier "https://vocab.nerc.ac.uk/collection/P01/current/ATTNZZ01/";
String units "1/m";
}
beam_c_sd {
Float32 _FillValue NaN;
Float32 actual_range 0.0, 12.9557;
String bcodmo_name "unknown";
Float64 colorBarMaximum 50.0;
Float64 colorBarMinimum 0.0;
String description "Standard deviation of beam_c_avg.";
String long_name "Beam C Sd";
String units "1/m";
}
beam_c_min {
Float32 _FillValue NaN;
Float32 actual_range -0.0336, 0.8531;
String bcodmo_name "beam_c";
String description "Minimum beam attenuation from Chelsea/Seatech/WET Labs CStar (in inverse meters).";
String long_name "Beam C Min";
String nerc_identifier "https://vocab.nerc.ac.uk/collection/P01/current/ATTNZZ01/";
String units "1/m";
}
beam_c_max {
Float32 _FillValue NaN;
Float32 actual_range -0.0316, 55.262;
String bcodmo_name "beam_c";
String description "Maximum beam attenuation from Chelsea/Seatech/WET Labs CStar (in inverse meters).";
String long_name "Beam C Max";
String nerc_identifier "https://vocab.nerc.ac.uk/collection/P01/current/ATTNZZ01/";
String units "1/m";
}
fluor_avg {
Float32 _FillValue NaN;
Float32 actual_range 0.0053, 12.7407;
String bcodmo_name "fluorescence";
String description "Average fluorescence from WET Labs ECO-AFL/FL in milligrams per cubic meter. Column originally named 'FlECO-AFL'.";
String long_name "Fluor Avg";
String nerc_identifier "https://vocab.nerc.ac.uk/collection/P01/current/CPHLPM01/";
String units "mg/m^3";
}
fluor_sd {
Float32 _FillValue NaN;
Float32 actual_range 0.0, 2.9361;
String bcodmo_name "unknown";
Float64 colorBarMaximum 50.0;
Float64 colorBarMinimum 0.0;
String description "Standard deviation of fluor_avg.";
String long_name "Fluor Sd";
String units "mg/m^3";
}
fluor_min {
Float32 _FillValue NaN;
Float32 actual_range -0.48, 11.7544;
String bcodmo_name "fluorescence";
String description "Minimum fluorescence from WET Labs ECO-AFL/FL in milligrams per cubic meter.";
String long_name "Fluor Min";
String nerc_identifier "https://vocab.nerc.ac.uk/collection/P01/current/CPHLPM01/";
String units "mg/m^3";
}
fluor_max {
Float32 _FillValue NaN;
Float32 actual_range 0.0255, 19.8277;
String bcodmo_name "fluorescence";
String description "Maximum fluorescence from WET Labs ECO-AFL/FL in milligrams per cubic meter.";
String long_name "Fluor Max";
String nerc_identifier "https://vocab.nerc.ac.uk/collection/P01/current/CPHLPM01/";
String units "mg/m^3";
}
turbidity_avg {
Float64 _FillValue NaN;
Float64 actual_range 0.3464983, 2.732032;
String bcodmo_name "turbidity";
String description "Average turbidity. Column originally named 'Upoly0'.";
String long_name "Turbidity Avg";
String units "NTU";
}
turbidity_sd {
Float64 _FillValue NaN;
Float64 actual_range 0.0, 2.3203463;
String bcodmo_name "unknown";
Float64 colorBarMaximum 50.0;
Float64 colorBarMinimum 0.0;
String description "Standard deviation of turbidity_avg.";
String long_name "Turbidity Sd";
String units "NTU";
}
turbidity_min {
Float64 _FillValue NaN;
Float64 actual_range 0.158, 1.171431;
String bcodmo_name "turbidity";
String description "Minimum turbidity.";
String long_name "Turbidity Min";
String units "NTU";
}
turbidity_max {
Float64 _FillValue NaN;
Float64 actual_range 0.3606862, 6.9833968;
String bcodmo_name "turbidity";
String description "Maximum turbidity.";
String long_name "Turbidity Max";
String units "NTU";
}
scan_avg {
Int32 _FillValue 2147483647;
Int32 actual_range 1127, 172925;
String bcodmo_name "scan";
String description "Average scan number.";
String long_name "Scan Avg";
String units "unitless";
}
scan_sd {
Byte _FillValue 127;
String _Unsigned "false";
Byte actual_range 0, 35;
String bcodmo_name "unknown";
Float64 colorBarMaximum 50.0;
Float64 colorBarMinimum 0.0;
String description "Standard deviation of scan_avg.";
String long_name "Scan Sd";
String units "unitless";
}
scan_min {
Int32 _FillValue 2147483647;
Int32 actual_range 1067, 172865;
String bcodmo_name "scan";
String description "Minimum scan number.";
String long_name "Scan Min";
String units "unitless";
}
scan_max {
Int32 _FillValue 2147483647;
Int32 actual_range 1187, 172985;
String bcodmo_name "scan";
String description "Maximum scan number.";
String long_name "Scan Max";
String units "unitless";
}
time {
String _CoordinateAxisType "Time";
Float64 actual_range 1.339840185e+9, 1.341930713e+9;
String axis "T";
String bcodmo_name "ISO_DateTime_UTC";
String description "Date/Time (UTC) formatted to ISO 8601 standard. T indicates start of time string; Z indicates UTC.";
String ioos_category "Time";
String long_name "ISO Date Time UTC";
String nerc_identifier "https://vocab.nerc.ac.uk/collection/P01/current/DTUT8601/";
String source_name "ISO_DateTime_UTC";
String standard_name "time";
String time_origin "01-JAN-1970 00:00:00";
String time_precision "1970-01-01T00:00:00Z";
String units "seconds since 1970-01-01T00:00:00Z";
}
}
NC_GLOBAL {
String access_formats ".htmlTable,.csv,.json,.mat,.nc,.tsv,.esriCsv,.geoJson,.odvTxt";
String acquisition_description
"Header information from Sea-Bird SBE 9 Bottle (.btl) Data file:
Software Version Seasave V 7.21e
Temperature SN = 4406; Conductivity SN = 1474
Number of Bytes Per Scan = 44; Number of Voltage Words = 5
Number of Scans Averaged by the Deck Unit = 1
Sensor Channel 1: Frequency 0, Temperature; SensorID = 55; Serial Number =
4406
Calibration Date: 14-Feb-12
Use G_J: 1
A: 0.00000000e+000; B: 0.00000000e+000; C: 0.00000000e+000; D:
0.00000000e+000; F0_Old: 0.000
G: 4.33630903e-003; H: 6.36463726e-004; I: 2.06290680e-005; J:
1.71729728e-006
F0: 1000.000
Slope: 1.00000000; Offset: 0.0000
Sensor Channel 2: Frequency 1, Conductivity; Sensor ID = 3; Serial Number =
1474
Calibration Date: 14-Feb-12
Use G_J: 1; Cell const and series R are applicable only for wide range
sensors.
Series R: 0.0000; CellConst: 2000.0000; Conductivity Type: 0
Coefficients equation = 0
\\u00a0 A: 0.00000000e+000; B: 0.00000000e+000; C: 0.00000000e+000; D:
0.00000000e+000; M: 0.0
\\u00a0 CPcor: -9.57000000e-008
Coefficients equation = 1
\\u00a0 G: -4.21351634e+000; H: 5.39243337e-001; I: -2.08827162e-004; J:
3.95099976e-005
\\u00a0 CPcor: -9.57000000e-008; CTcor: 3.2500e-006
WBOTC not applicable unless ConductivityType = 1.
WBOTC: 0.00000000e+000
Slope: 1.00000000; Offset: 0.00000
Sensor Channel 3: Frequency 2, Pressure; Digiquartz with TC; Sensor ID = 45;
Serial Number: 69685 in 090484 vertical orientation
Calibration Date: 12/18/2002
C1: -4.680530e+004; C2: -8.320595e-001; C3: 1.450810e-002
D1: 3.903100e-002; D2: 0.000000e+000
T1: 3.038361e+001; T2: -5.411459e-004; T3: 4.085080e-006; T4: 2.564540e-009
Slope: 0.99995000; Offset: 0.00000
T5: 0.000000e+000
AD590M: 1.280820e-002; AD590B: -9.210198e+000
Sensor Channel 4: Frequency 3, Temperature, 2; Sensor ID = 55; Serial Number:
2271
Calibration Date: 14-Feb-12
Use G_J: 1
A: 0.00000000e+000; B: 0.00000000e+000; C: 0.00000000e+000; D:
0.00000000e+000; F0_Old: 0.000
G: 4.33365550e-003; H: 6.41046238e-004; I: 2.31654312e-005; J:
2.15092946e-006
F0: 1000.000
Slope: 1.00000000; Offset: 0.0000
Sensor Channel 5: Frequency 4, Conductivity, 2; Sensor ID = 3; Serial Number:
2707
Calibration Date: 14-Feb-12
Use G_J: 1
Cell const and series R are applicable only for wide range sensors.
Series R: 0.0000
CellConst: 2000.0000
Conductivity Type: 0
Coefficients equation = 0
\\u00a0 A: 0.00000000e+000; B: 0.00000000e+000; C: 0.00000000e+000; D:
0.00000000e+000; M: 0.0
\\u00a0 CPcor: -9.57000000e-008
Coefficients equation = 1
\\u00a0 G: -1.07258216e+001; H: 1.55968861e+000; I: -1.50749109e-003; J:
2.09512327e-004
\\u00a0 CPcor: -9.57000000e-008; CTcor: 3.2500e-006
WBOTC not applicable unless ConductivityType = 1.
WBOTC: 0.00000000e+000
Slope: 1.00000000; Offset: 0.00000
Sensor Channel 6: A/D voltage 0, Fluorometer, WET Labs ECO-AFL/FL; Sensor ID =
20; Serial Number = FLNTURTD-1013
Calibration Date: april 18, 2008
ScaleFactor: 6.00000000e+000
Vblank: 0.0800
Sensor Channel 7: A/D voltage 1, User Polynomial; Sensor ID = 61; Serial
Number = FLNTURTD-1013
Calibration Date: april 18, 2008
SensorName: turbidity
A0: 0.15800000; A1: 2.00000000; A2: 0.00000000; A3: 0.00000000
Sensor Channel 8: A/D voltage 2, PAR/Irradiance, Biospherical/Licor; Sensor ID
= 42; Serial Number = 4550
Calibration Date: 13-Mar-2008
M: 1.00000000; B: 0.00000000
Calibration Constant: 77519400000.00000000
Multiplier: 1.00000000; Offset: -0.01906000
Sensor Channel 9: A/D voltage 3, Transmissometer, Chelsea/Seatech/WET Lab
CStar; Sensor ID = 59; Serial Number = CST-1117DR
Calibration Date: 05-Aug-2011
M: 21.0530; B: -0.1537
PathLength: 0.250
Sensor Channel 10: A/D voltage 4, Altimeter; Sensor ID = 0; Serial Number:
1133
Calibration Date:
ScaleFactor: 14.950; Offset: 0.200
Sensor Channel 11: A/D voltage 5, Oxygen, SBE 43; Sensor ID = 38; Serial
Number: 0723
Calibration Date: 11-Feb-12
Use2007Equation: 1
CalibrationCoefficients equation = 0
\\u00a0 Coefficients for Owens-Millard equation.
\\u00a0 Boc: 0.0000; Soc: 0.0000e+000; Offset: 0.0000
\\u00a0 Pcor: 0.00e+000; Tcor: 0.0000; Tau: 0.0
CalibrationCoefficients equation = 1
\\u00a0 Coefficients for Sea-Bird equation - SBE calibration in 2007 and
later.
\\u00a0 Soc: 5.5281e-001; Offset: -0.5125
\\u00a0 A: -2.4781e-003; B:\\u00a0 9.2148e-005; C: -1.8426e-006
\\u00a0 D0: 2.5826e+000; D1: 1.92634e-004; D2: -4.64803e-002; E: 3.6000e-002
\\u00a0 Tau20: 1.3300
\\u00a0 H1: -3.3000e-002; H2: 5.0000e+003; H3: 1.4500e+003
Sensor Channel 12: A/D voltage 6, User Polynomial, 2; Sensor ID = 61; Serial
Number = SUNA
Calibration Date: N/A
Sensor Name: SUNA Nitrate
A0: -3.73832000; A1: 10.68091000; A2: 0.00000000; A3: 0.00000000
Sensor Channel 13: A/D voltage 7, Free
Sensor Channel 14: SPAR voltage, Unavailable
Sensor Channel 15: SPAR voltage, SPAR/Surface Irradiance; Sensor ID = 51;
Serial Number: 6294
Calibration Date: 2008-03-13
Conversion Factor: 1826.90000000; Ratio Multiplier: 1.00000000
datcnv_ox_hysteresis_correction = yes
datcnv_ox_tau_correction = no
datcnv_bottle_scan_range_source = scans marked with bottle confirm bit, 0, 5
bottlesum_ox_tau_correction = yes";
String awards_0_award_nid "54797";
String awards_0_award_number "OCE-1061883";
String awards_0_data_url "http://www.nsf.gov/awardsearch/showAward.do?AwardNumber=1061883";
String awards_0_funder_name "NSF Division of Ocean Sciences";
String awards_0_funding_acronym "NSF OCE";
String awards_0_funding_source_nid "355";
String awards_0_program_manager "David L. Garrison";
String awards_0_program_manager_nid "50534";
String cdm_data_type "Other";
String comment
"Niskin Bottle Data from cruise KN207-03
PI: Kay Bidle (Rutgers)
Version: 28 March 2013
Note: BCO-DMO added cast, date, time_start, lat_start, lon_start from
the CTD file headers.";
String Conventions "COARDS, CF-1.6, ACDD-1.3";
String creator_email "info@bco-dmo.org";
String creator_name "BCO-DMO";
String creator_type "institution";
String creator_url "https://www.bco-dmo.org/";
String data_source "extract_data_as_tsv version 2.3 19 Dec 2019";
String date_created "2013-03-28T17:56:49Z";
String date_modified "2019-10-28T17:30:16Z";
String defaultDataQuery "&time<now";
String doi "10.1575/1912/bco-dmo.3902.1";
Float64 Easternmost_Easting -26.4407;
Float64 geospatial_lat_max 63.3478;
Float64 geospatial_lat_min 40.6573;
String geospatial_lat_units "degrees_north";
Float64 geospatial_lon_max -26.4407;
Float64 geospatial_lon_min -35.0738;
String geospatial_lon_units "degrees_east";
Float64 geospatial_vertical_max 2503.232;
Float64 geospatial_vertical_min 1.162;
String geospatial_vertical_positive "down";
String geospatial_vertical_units "m";
String history
"2024-11-23T17:02:57Z (local files)
2024-11-23T17:02:57Z https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3902.html";
String infoUrl "https://www.bco-dmo.org/dataset/3902";
String institution "BCO-DMO";
String instruments_0_acronym "Niskin bottle";
String instruments_0_dataset_instrument_nid "6115";
String instruments_0_description "A Niskin bottle (a next generation water sampler based on the Nansen bottle) is a cylindrical, non-metallic water collection device with stoppers at both ends. The bottles can be attached individually on a hydrowire or deployed in 12, 24 or 36 bottle Rosette systems mounted on a frame and combined with a CTD. Niskin bottles are used to collect discrete water samples for a range of measurements including pigments, nutrients, plankton, etc.";
String instruments_0_instrument_external_identifier "https://vocab.nerc.ac.uk/collection/L22/current/TOOL0412/";
String instruments_0_instrument_name "Niskin bottle";
String instruments_0_instrument_nid "413";
String instruments_0_supplied_name "Niskin bottle";
String keywords "altimetry, average, bco, bco-dmo, beam, beam_c_avg, beam_c_max, beam_c_min, beam_c_sd, biological, bottle, cast, chemical, cond, cond2, cond2_avg, cond2_max, cond2_min, cond2_sd, cond_avg, cond_max, cond_min, cond_sd, data, dataset, date, date_gmt, depth, depth_avg, depth_max, depth_min, depth_sd, dmo, erddap, fluor, fluor_avg, fluor_max, fluor_min, fluor_sd, iso, laboratory, latitude, longitude, management, max, min, O2, O2_sat_pcnt, O2_v_avg, O2_v_max, O2_v_min, O2_v_sd, oceanography, office, oxygen, pcnt, potemp, potemp2, preliminary, press, press_avg, press_max, press_min, press_sd, sal, sal2, sat, satellite, scan, scan_avg, scan_max, scan_min, scan_sd, sigma, sigma_0, sigma_0_2, sigma_t, sigma_t_2, start, temp2, temp2_avg, temp2_max, temp2_min, temp2_sd, temp_avg, temp_max, temp_min, temp_sd, temperature, time, time_gmt, time_start, trans, trans_avg, trans_max, trans_min, trans_sd, turbidity, turbidity_avg, turbidity_max, turbidity_min, turbidity_sd, v";
String license "https://www.bco-dmo.org/dataset/3902/license";
String metadata_source "https://www.bco-dmo.org/api/dataset/3902";
Float64 Northernmost_Northing 63.3478;
String param_mapping "{'3902': {'lat_start': 'flag - latitude', 'lon_start': 'flag - longitude', 'ISO_DateTime_UTC': 'master - time', 'depth_avg': 'flag - depth'}}";
String parameter_source "https://www.bco-dmo.org/mapserver/dataset/3902/parameters";
String people_0_affiliation "Rutgers University";
String people_0_affiliation_acronym "Rutgers IMCS";
String people_0_person_name "Kay D Bidle";
String people_0_person_nid "51281";
String people_0_role "Principal Investigator";
String people_0_role_type "originator";
String people_1_affiliation "College of Charleston";
String people_1_affiliation_acronym "CofC";
String people_1_person_name "Giacomo DiTullio";
String people_1_person_nid "50689";
String people_1_role "Principal Investigator";
String people_1_role_type "originator";
String people_2_affiliation "Woods Hole Oceanographic Institution";
String people_2_affiliation_acronym "WHOI";
String people_2_person_name "Benjamin A.S. Van Mooy";
String people_2_person_nid "50975";
String people_2_role "Principal Investigator";
String people_2_role_type "originator";
String people_3_affiliation "Woods Hole Oceanographic Institution";
String people_3_affiliation_acronym "WHOI";
String people_3_person_name "Marco Coolen";
String people_3_person_nid "51363";
String people_3_role "Co-Principal Investigator";
String people_3_role_type "originator";
String people_4_affiliation "Weizmann Institute of Science";
String people_4_person_name "Assaf Vardi";
String people_4_person_nid "51364";
String people_4_role "Co-Principal Investigator";
String people_4_role_type "originator";
String people_5_affiliation "Woods Hole Oceanographic Institution";
String people_5_affiliation_acronym "WHOI BCO-DMO";
String people_5_person_name "Shannon Rauch";
String people_5_person_nid "51498";
String people_5_role "BCO-DMO Data Manager";
String people_5_role_type "related";
String project "NA-VICE";
String projects_0_acronym "NA-VICE";
String projects_0_description
"This project is also called \"NA-VICE\" (North Atlantic Virus Infection of Coccolithophores Expedition).
Project description from NSF award abstract:
Despite the critical importance of viruses in shaping marine microbial ecosystems, very little is known about the molecular mechanisms mediating phytoplankton-virus interactions. As a consequence, we currently lack biomarkers to quantify active viral infection in the oceans, significantly hindering our understanding of its ecological and biogeochemical impacts.
The coccolithophore Emiliania huxleyi (Prymnesiophyceae, Haptophyte) is a cosmopolitan unicellular photoautotroph whose calcite skeletons account for about a third of the total marine CaCO3 production. E. huxleyi forms massive annual spring blooms in the North Atlantic that are infected and terminated by lytic, giant double-stranded DNA containing coccolithoviruses. Findings that lytic viral infection of E. huxleyi recruits the hosts programmed cell death (PCD) machinery demonstrate that viruses employ a sophisticated, co-evolutionary “arms race” in mediating host-virus interactions. The investigators recently demonstrated that viral glycosphingolipids (vGSLs), derived from unexpected cluster of sphingolipid biosynthetic genes, a pathway never before described in a viral genome, play a crucial functional role in facilitating infection of E. huxleyi. The observations of vGSLs in the North Atlantic and Norwegian fjords further suggest that they may be novel, diagnostic biomarkers for viral infection of coccolithophore populations. At the same time, the discovery of vGSLs and a distinct, protective 802 lipid argues that a host-virus, co-evolutionary chemical arms race plays a pivotal role in regulating viral infection and in lubricating upper ocean biogeochemical fluxes of carbon and sulfur.
The focus of this collaborative research project is to elucidate the molecular, ecological, and biogeochemical links between vGSLs (and other polar lipids) and the global cycles of carbon and sulfur.
The team of investigators proposes a multi-pronged approach combing a suite of lab-based, mechanistic studies using several haptophyte-virus model systems along with observational studies and manipulative field-based experiments the Northeast Atlantic. Using these diagnostic markers, they will document active viral infection of natural coccolithophore populations and couple it with a suite of oceanographic measurements in order to quantify how viral infection (via vGSLs) influences cell fate, the dissolved organic carbon (DOC) pool, vertical export of particular organic (POC) and inorganic carbon (PIC; as calcium carbonate, CaCO3) (along with associated alkenone lipid biomarkers and genetic signatures of viruses and their hosts) and the upper ocean sulfur cycle (via the cycling of dimethylsulfide [DMS] and other biogenic sulfur compounds). Furthermore, given they are unique to viruses, the investigators propose that vGSLs can be used to trace the flow of virally-derived carbon and provide quantitative insights into a “viral shunt” that diverts fixed carbon from higher trophic levels and the deep sea.
The overarching hypothesis for this study is that vGSLs are cornerstone molecules in the upper ocean, which facilitate viral infection on massive scales and thereby mechanistically \"lubricate\" the biogeochemical fluxes of C and S in the ocean.";
String projects_0_end_date "2014-02";
String projects_0_geolocation "North Atlantic; Azores to Iceland";
String projects_0_name "Lipid lubrication of oceanic carbon and sulfur biogeochemistry via a host-virus chemical arms race";
String projects_0_project_nid "2136";
String projects_0_start_date "2011-03";
String publisher_name "Biological and Chemical Oceanographic Data Management Office (BCO-DMO)";
String publisher_type "institution";
String sourceUrl "(local files)";
Float64 Southernmost_Northing 40.6573;
String standard_name_vocabulary "CF Standard Name Table v55";
String summary "Niskin bottle data, including salinity, O2, temperature, conductivity, etc, from R/V Knorr cruise KN207-03 in the North Atlantic (transect from Ponta Delgada, Azores to Reykjavik, Iceland) in 2012 (NA-VICE project).";
String time_coverage_end "2012-07-10T14:31:53Z";
String time_coverage_start "2012-06-16T09:49:45Z";
String title "[bottle] - Niskin bottle data, including salinity, O2, temperature, conductivity, etc, from R/V Knorr cruise KN207-03 in the North Atlantic (transect from Ponta Delgada, Azores to Reykjavik, Iceland) in 2012 (NA-VICE project) (Lipid lubrication of oceanic carbon and sulfur biogeochemistry via a host-virus chemical arms race)";
String version "1";
Float64 Westernmost_Easting -35.0738;
String xml_source "osprey2erddap.update_xml() v1.3";
}
}
Data Access Protocol (DAP) and its
selection constraints.
The URL specifies what you want: the dataset, a description of the graph or the subset of the data, and the file type for the response.
Tabledap request URLs must be in the form
https://coastwatch.pfeg.noaa.gov/erddap/tabledap/datasetID.fileType{?query}
For example,
https://coastwatch.pfeg.noaa.gov/erddap/tabledap/pmelTaoDySst.htmlTable?longitude,latitude,time,station,wmo_platform_code,T_25&time>=2015-05-23T12:00:00Z&time<=2015-05-31T12:00:00Z
Thus, the query is often a comma-separated list of desired variable names,
followed by a collection of
constraints (e.g., variable<value),
each preceded by '&' (which is interpreted as "AND").
For details, see the tabledap Documentation.