Accessing BCO-DMO data
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BCO-DMO ERDDAP
Accessing BCO-DMO data |
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| Dataset Title: | Station locations for the global metaproteomic dataset from R/V Kilo Moana cruise KM1128, the METZYME expedition in the tropical North Pacific in 2011. 
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| Institution: | BCO-DMO (Dataset ID: bcodmo_dataset_730891) |
| Range: | longitude = -173.1 to -154.4°E, latitude = -15.0 to 17.0°N, depth = 20.0 to 800.0m, time = 2011-10-05T20:00Z to 2011-10-23T20:00Z |
| Information: | Summary
| License
| ISO 19115
| Metadata
| Background
| Subset
| Data Access Form
| Files
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Zoom: ![[The graph you specified. Please be patient.]](https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_730891.png?longitude,latitude,station_number&distinct()&.draw=markers&.marker=5%7C5&.color=0x000000&.colorBar=%7C%7C%7C%7C%7C&.bgColor=0xffccccff)
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Attributes {
s {
cruise {
String bcodmo_name "cruise_id";
String description "Cruise deployment identification";
String long_name "Cruise";
String units "unitless";
}
station_ID {
String bcodmo_name "station";
String description "Station ID; a combination of station number and depth at the station";
String long_name "Station ID";
String units "unitless";
}
station_number {
Byte _FillValue 127;
Byte actual_range 1, 12;
String bcodmo_name "station";
Float64 colorBarMaximum 100.0;
Float64 colorBarMinimum 0.0;
String description "Station number";
String long_name "Station Number";
String units "unitless";
}
depth {
String _CoordinateAxisType "Height";
String _CoordinateZisPositive "down";
Float64 _FillValue NaN;
Float64 actual_range 20.0, 800.0;
String axis "Z";
String bcodmo_name "depth";
Float64 colorBarMaximum 8000.0;
Float64 colorBarMinimum -8000.0;
String colorBarPalette "TopographyDepth";
String description "Depth at station";
String ioos_category "Location";
String long_name "Depth";
String nerc_identifier "https://vocab.nerc.ac.uk/collection/P09/current/DEPH/";
String positive "down";
String standard_name "depth";
String units "m";
}
McLane_cast {
String bcodmo_name "cast";
String description "McLane cast ID number";
String long_name "Mc Lane Cast";
String units "unitless";
}
McLane_date_local {
String bcodmo_name "date_local";
String description "Date Local (HST, UTC-10) in format yyyy-mm-dd";
String long_name "Mc Lane Date Local";
String time_precision "1970-01-01";
String units "unitless";
}
McLane_time_local {
String bcodmo_name "time_local";
String description "Time Local (HST, UTC-10) in format hh:mm";
String long_name "Mc Lane Time Local";
String units "unitless";
}
latitude {
String _CoordinateAxisType "Lat";
Float64 _FillValue NaN;
Float64 actual_range -15.0, 17.0;
String axis "Y";
String bcodmo_name "latitude";
Float64 colorBarMaximum 90.0;
Float64 colorBarMinimum -90.0;
String description "Latitude";
String ioos_category "Location";
String long_name "Latitude";
String nerc_identifier "https://vocab.nerc.ac.uk/collection/P09/current/LATX/";
String standard_name "latitude";
String units "degrees_north";
}
longitude {
String _CoordinateAxisType "Lon";
Float64 _FillValue NaN;
Float64 actual_range -173.1, -154.4;
String axis "X";
String bcodmo_name "longitude";
Float64 colorBarMaximum 180.0;
Float64 colorBarMinimum -180.0;
String description "Longitude";
String ioos_category "Location";
String long_name "Longitude";
String nerc_identifier "https://vocab.nerc.ac.uk/collection/P09/current/LONX/";
String standard_name "longitude";
String units "degrees_east";
}
time {
String _CoordinateAxisType "Time";
Float64 actual_range 1.3178448e+9, 1.3194e+9;
String axis "T";
String bcodmo_name "ISO_DateTime_UTC";
String description "Timestamp (UTC) in standard ISO 8601:2004(E) format YYYY-mm-ddTHH:MMZ";
String ioos_category "Time";
String long_name "ISO Date Time UTC";
String nerc_identifier "https://vocab.nerc.ac.uk/collection/P01/current/DTUT8601/";
String source_name "ISO_DateTime_UTC";
String standard_name "time";
String time_origin "01-JAN-1970 00:00:00";
String time_precision "1970-01-01T00:00Z";
String units "seconds since 1970-01-01T00:00:00Z";
}
}
NC_GLOBAL {
String access_formats ".htmlTable,.csv,.json,.mat,.nc,.tsv,.esriCsv,.geoJson,.odvTxt";
String acquisition_description
"Station locations for the global metaproteomic dataset from KM1128 the METZYME
expedition.";
String awards_0_award_nid "551236";
String awards_0_award_number "OCE-1260233";
String awards_0_data_url "http://www.nsf.gov/awardsearch/showAward.do?AwardNumber=1260233";
String awards_0_funder_name "NSF Division of Ocean Sciences";
String awards_0_funding_acronym "NSF OCE";
String awards_0_funding_source_nid "355";
String awards_0_program_manager "David L. Garrison";
String awards_0_program_manager_nid "50534";
String awards_1_award_nid "646122";
String awards_1_award_number "GBMF3782";
String awards_1_data_url "https://www.moore.org/grant-detail?grantId=GBMF3782";
String awards_1_funder_name "Gordon and Betty Moore Foundation: Marine Microbiology Initiative";
String awards_1_funding_acronym "MMI";
String awards_1_funding_source_nid "385";
String cdm_data_type "Other";
String comment
"Metzyme Station Locations
M. Saito, PI
data version 3: 2019-04-12";
String Conventions "COARDS, CF-1.6, ACDD-1.3";
String creator_email "info@bco-dmo.org";
String creator_name "BCO-DMO";
String creator_type "institution";
String creator_url "https://www.bco-dmo.org/";
String data_source "extract_data_as_tsv version 2.3 19 Dec 2019";
String date_created "2018-03-13T21:22:00Z";
String date_modified "2019-04-12T20:59:02Z";
String defaultDataQuery "&time<now";
String doi "10.1575/1912/bco-dmo.730891.3";
Float64 Easternmost_Easting -154.4;
Float64 geospatial_lat_max 17.0;
Float64 geospatial_lat_min -15.0;
String geospatial_lat_units "degrees_north";
Float64 geospatial_lon_max -154.4;
Float64 geospatial_lon_min -173.1;
String geospatial_lon_units "degrees_east";
Float64 geospatial_vertical_max 800.0;
Float64 geospatial_vertical_min 20.0;
String geospatial_vertical_positive "down";
String geospatial_vertical_units "m";
String history
"2024-04-16T19:13:47Z (local files)
2024-04-16T19:13:47Z https://erddap.bco-dmo.org/tabledap/bcodmo_dataset_730891.das";
String infoUrl "https://www.bco-dmo.org/dataset/730891";
String institution "BCO-DMO";
String keywords "bco, bco-dmo, biological, cast, chemical, cruise, data, dataset, date, depth, dmo, erddap, iso, lane, latitude, local, longitude, management, McLane_cast, McLane_date_local, McLane_time_local, number, oceanography, office, preliminary, station, station_ID, station_number, time";
String license "https://www.bco-dmo.org/dataset/730891/license";
String metadata_source "https://www.bco-dmo.org/api/dataset/730891";
Float64 Northernmost_Northing 17.0;
String param_mapping "{'730891': {'lat': 'master - latitude', 'depth': 'flag - depth', 'lon': 'master - longitude', 'ISO_DateTime_UTC': 'flag - time'}}";
String parameter_source "https://www.bco-dmo.org/mapserver/dataset/730891/parameters";
String people_0_affiliation "Woods Hole Oceanographic Institution";
String people_0_affiliation_acronym "WHOI";
String people_0_person_name "Mak A. Saito";
String people_0_person_nid "50985";
String people_0_role "Principal Investigator";
String people_0_role_type "originator";
String people_1_affiliation "Woods Hole Oceanographic Institution";
String people_1_affiliation_acronym "WHOI BCO-DMO";
String people_1_person_name "Hannah Ake";
String people_1_person_nid "650173";
String people_1_role "BCO-DMO Data Manager";
String people_1_role_type "related";
String people_2_affiliation "Woods Hole Oceanographic Institution";
String people_2_affiliation_acronym "WHOI BCO-DMO";
String people_2_person_name "Amber York";
String people_2_person_nid "643627";
String people_2_role "BCO-DMO Data Manager";
String people_2_role_type "related";
String project "MetZyme";
String projects_0_acronym "MetZyme";
String projects_0_description "MetZyme project researchers will determine the role of enzymatic activity in the cycling of trace metals. Specifically the research will address the following questions: (1) degradation of sinking particulate organic material in the Tropical North Pacific can be influenced by the ability of microbes to synthesize zinc proteases, which in turn is controlled by the abundance or availability of zinc, and (2) methylation of mercury is controlled, in part, by the activity of cobalt-containing enzymes, and therefore the supply of labile cobalt to the corrinoid-containing enzymes or co-factors responsible for methylation. To attain their goal, they will collect dissolved and particulate samples for trace metals and metalloenzymes from three stations along a biogeochemical gradient in the Tropical North Pacific (along 150 degrees West from 18 degrees North to the equator). Sinking particles from metal clean sediment traps will also be obtained. The samples will also be used to carry out shipboard incubation experiments using amendments of metals, metal-chelators, B12, and proteases to examine the sensitivity and metal limitation of heterotrophic, enzymatic degradation of organic matter within the oceanic \"Twilight Zone\" (100-500 m). This study will result in a novel metaproteomic/metalloenzyme datasets that should provide insights into the biogeochemical cycling of metals, as well as co-limitation of primary productivity and controls on the export of carbon from the photic zone. In addition to the final data being contributed to BCO-DMO, an online metaproteomic data server will be created so the community has access to the raw data files generated by this research.";
String projects_0_end_date "2013-08";
String projects_0_geolocation "Tropical North Pacific along 150 degrees West from 18 degrees North to the equator";
String projects_0_name "Connecting Trace Elements and Metalloenzymes Across Marine Biogeochemical Gradients";
String projects_0_project_nid "2236";
String projects_0_start_date "2010-09";
String publisher_name "Biological and Chemical Oceanographic Data Management Office (BCO-DMO)";
String publisher_type "institution";
String sourceUrl "(local files)";
Float64 Southernmost_Northing -15.0;
String standard_name_vocabulary "CF Standard Name Table v55";
String subsetVariables "cruise";
String summary "Station locations for the global metaproteomic dataset from R/V Kilo Moana cruise KM1128, the METZYME expedition in the tropical North Pacific in 2011.";
String time_coverage_end "2011-10-23T20:00Z";
String time_coverage_start "2011-10-05T20:00Z";
String title "Station locations for the global metaproteomic dataset from R/V Kilo Moana cruise KM1128, the METZYME expedition in the tropical North Pacific in 2011.";
String version "3";
Float64 Westernmost_Easting -173.1;
String xml_source "osprey2erddap.update_xml() v1.3";
}
}
Data Access Protocol (DAP) and its
selection constraints.
The URL specifies what you want: the dataset, a description of the graph or the subset of the data, and the file type for the response.
Tabledap request URLs must be in the form
https://coastwatch.pfeg.noaa.gov/erddap/tabledap/datasetID.fileType{?query}
For example,
https://coastwatch.pfeg.noaa.gov/erddap/tabledap/pmelTaoDySst.htmlTable?longitude,latitude,time,station,wmo_platform_code,T_25&time>=2015-05-23T12:00:00Z&time<=2015-05-31T12:00:00Z
Thus, the query is often a comma-separated list of desired variable names,
followed by a collection of
constraints (e.g., variable<value),
each preceded by '&' (which is interpreted as "AND").
For details, see the tabledap Documentation.