Accessing BCO-DMO data
Brought to you by BCO-DMO
|
|
BCO-DMO ERDDAP
Accessing BCO-DMO data |
log in
Brought to you by BCO-DMO |
| sequence_accession_number | link | Species_Names | description_of_the_types_of_sequences | locations_where_species_were_collected | latitude_dms | longitude_dms | latitude | longitude | Vessel | Dive_number | sequencing_and_analysis_methods | instrument_and_model | Analysis_methods |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| unitless | unitless | unitless | unitless | unitless | unitless | unitless | degrees_north | degrees_east | unitless | unitless | unitless | unitless | unitless |
| SRX4556790 | https://www.ncbi.nlm.nih.gov/sra/SRX4556790[accn]
| cold seep metagenome | metagenomic sequencing of pushcore samples from hydrothermal vents | Hydrate Ridge | 44 34 10.20 N | 125 8 48.48 W | 44.5694 | -125.1467 | ROV Ropos | 1458 | PCR amplicon (from Archaea and Bacteria 16S universal primers 515F/806R) | Illumina MiSeq with Reagent Kit v3 | Raw sequences generated using manufacturer's software and then quality filtered using QIIME V. 1.8.0 |
| SRX4556789 | https://www.ncbi.nlm.nih.gov/sra/SRX4556789[accn]
| cold seep metagenome | metagenomic sequencing of pushcore samples from hydrothermal vents | Middle Valley | 48 27 26.40 N | 128 42 30.60 W | 48.45722 | -128.70861 | DSV Alvin | 4625 | PCR amplicon (from Archaea and Bacteria 16S universal primers 515F/806R) | Illumina MiSeq with Reagent Kit v3 | Raw sequences generated using manufacturer's software and then quality filtered using QIIME V. 1.8.0 |
| SRX4556788 | https://www.ncbi.nlm.nih.gov/sra/SRX4556788[accn]
| cold seep metagenome | metagenomic sequencing of pushcore samples from hydrothermal vents | Guaymas Basin | 27 0 27.84 N | 111 24 27.84 W | 27.0078 | -111.4078 | DSV Alvin | 4486 | PCR amplicon (from Archaea and Bacteria 16S universal primers 515F/806R) | Illumina MiSeq with Reagent Kit v3 | Raw sequences generated using manufacturer's software and then quality filtered using QIIME V. 1.8.0 |