http://lod.bco-dmo.org/id/dataset/777130
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2019-09-20
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
Growth data from static and fluctuating pCO2 x dissolved oxygen (DO) experiments on Menidia menidia
2019-09-20
publication
2019-09-20
revision
Marine Biological Laboratory/Woods Hole Oceanographic Institution Library (MBLWHOI DLA)
2019-10-31
publication
https://doi.org/10.1575/1912/bco-dmo.777130.1
Hannes Baumann
University of Connecticut
principalInvestigator
Emma L. Cross
University of Connecticut
principalInvestigator
Christopher S. Murray
University of Connecticut
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
Cite this dataset as: Baumann, H., Cross, E. (2019) Growth data from static and fluctuating pCO2 x dissolved oxygen (DO) experiments on Menidia menidia. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2019-09-20 [if applicable, indicate subset used]. doi:10.1575/1912/bco-dmo.777130.1 [access date]
Growth data from static and fluctuating pCO2 x dissolved oxygen (DO) experiments on Menidia menidia Dataset Description: <p>Growth data from static and fluctuating pCO2 x dissolved oxygen (DO) experiments on Menidia menidia. Four separate experiments were conducted over two consecutive years to determine the effects of static and fluctuating pCO2 x DO conditions on the early life survival and growth of the coastal forage fish, M. menidia.&nbsp;</p>
<p>See related datasets: <a href="https://www.bco-dmo.org/dataset/777117" target="_blank">survival</a> and <a href="https://www.bco-dmo.org/dataset/777144" target="_blank">carbonate chemistry</a>.</p> Methods and Sampling: <p>Wild adults were collected using a 30 x 2 m beach seine and strip-spawned in the laboratory the following day. 100 embryos were then placed in each replicate across 9 recirculating systems of different pCO2 x DO conditions (control, intermediate, extreme) and cycling patterns (static, small diel fluctuation, large diel fluctuation and tidal fluctuation).</p>
<p>pCO2 x DO conditions were measured every hour for each tank and adjusted to the pre-determined conditions via the injection of carbon dioxide, nitrogen gas and/or CO2-stripped air.&nbsp;LabView software (National Instruments) was used to control sampling pumps and gas and water solenoids.</p>
<p>Newly hatched larvae were counted each day with a subsample of 10 larvae preserved in 5% formalin on the first day of hatching to obtain a size at hatch measurements. All surviving larvae to 6 or 15 day post hatch were counted and preserved in 5% formalin. Length measurements were then conducted on calibrated images in ImagePRO up to a month after the end of the experiment.&nbsp;For more details please see Cross et al. (submitted).</p>
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1536165 Award URL: http://www.nsf.gov/awardsearch/showAward.do?AwardNumber=1536165
completed
Hannes Baumann
University of Connecticut
860-405-9297
Department of Marine Sciences 1080 Shennecossett Road
Groton
CT
06340-6048
USA
hannes.baumann@uconn.edu
pointOfContact
Emma L. Cross
University of Connecticut
860-405-9155
Department of Marine Sciences 1080 Shennecossett Road
Groton
CT
06340
USA
e.l.cross@cantab.net
pointOfContact
Christopher S. Murray
University of Connecticut
Washington Ocean Acidification Center University of Washington
Seattle
WA
98105
USA
sm187@uw.edu
pointOfContact
asNeeded
Dataset Version: 1
Unknown
Experiment
Treatment
Cycling_pattern
Tank_No
Hatch_length
Hatch_length_SE
Mean_growth_rate
Mean_growth_rate_SE
Aqualogic Deltastar
Hach pHD digital electrode
Metler Toledo G20 Potentiometric Titrator
Hach LDO Model 2
theme
None, User defined
experiment id
treatment
tank
length
growth
featureType
BCO-DMO Standard Parameters
Water Temperature Sensor
pH Sensor
Automatic titrator
Dissolved Oxygen Sensor
instrument
BCO-DMO Standard Instruments
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
Collaborative research: Understanding the effects of acidification and hypoxia within and across generations in a coastal marine fish
https://www.bco-dmo.org/project/650184
Collaborative research: Understanding the effects of acidification and hypoxia within and across generations in a coastal marine fish
<p><em>Description from NSF award abstract:</em><br />
Coastal marine ecosystems provide a number of important services and resources for humans, and at the same time, coastal waters are subject to environmental stressors such as increases in ocean acidification and reductions in dissolved oxygen. The effects of these stressors on coastal marine organisms remain poorly understood because most research to date has examined the sensitivity of species to one factor, but not to more than one in combination. This project will determine how a model fish species, the Atlantic silverside, will respond to observed and predicted levels of dissolved carbon dioxide (CO2) and oxygen (O2). Shorter-term experiments will measure embryo and larval survival, growth, and metabolism, and determine whether parents experiencing stressful conditions produce more robust offspring. Longer-term experiments will study the consequences of ocean acidification over the entire life span by quantifying the effects of high-CO2 conditions on the ratio of males to females, lifetime growth, and reproductive investment. These studies will provide a more comprehensive view of how multiple stressors may impact populations of Atlantic silversides and potentially other important forage fish species. This collaborative project will support and train three graduate students at the University of Connecticut and the Stony Brook University (NY), two institutions that attract students from minority groups. It will also provide a variety of opportunities for undergraduates to participate in research and the public to learn about the study, through summer research projects, incorporation in the "Women in Science and Engineering" program, and interactive displays of environmental data from monitoring buoys. The two early-career investigators are committed to increasing ocean literacy and awareness of NSF-funded research through public talks and presentations.</p>
<p>This project responds to the recognized need for multi-stressor assessments of species sensitivities to anthropogenic environmental change. It will combine environmental monitoring with advanced experimental approaches to characterize early and whole life consequences of acidification and hypoxia in the Atlantic silverside (Menidia menidia), a valued model species and important forage fish along most of the US east coast. Experiments will employ a newly constructed, computer-controlled fish rearing system to allow independent and combined manipulation of seawater pCO2 and dissolved oxygen (DO) content and the application of static and fluctuating pCO2 and DO levels that were chosen to represent contemporary and potential future scenarios in productive coastal habitats. First CO2, DO, and CO2 × DO dependent reaction norms will be quantified for fitness-relevant early life history (ELH) traits including pre- and post-hatch survival, time to hatch, post-hatch growth, by rearing offspring collected from wild adults from fertilization to 20 days post hatch (dph) using a full factorial design of 3 CO2 × 3 DO levels. Second, the effects of tidal and diel CO2 × DO fluctuations of different amplitudes on silverside ELH traits will be quantified. To address knowledge gaps regarding the CO2-sensitivity in this species, laboratory manipulations of adult spawner environments and reciprocal offspring exposure experiments will elucidate the role of transgenerational plasticity as a potential short-term mechanism to cope with changing environments. To better understand the mechanisms of fish early life CO2-sensitivity, the effects of temperature × CO2 on pre- and post-hatch metabolism will be robustly quantified. The final objective is to rear silversides from fertilization to maturity under different CO2 levels and assess potential CO2-effects on sex ratio and whole life growth and fecundity.</p>
<p><strong>Related references:</strong><br />
Gobler, C.J. and Baumann, H. (2016) Hypoxia and acidification in ocean ecosystems: Coupled dynamics and effects on marine life. Biology Letters 12:20150976. doi:<a href="https://dx.doi.org/10.1098/rsbl.2015.0976" target="_blank">10.1098/rsbl.2015.0976</a></p>
<p>Baumann, H. (2016) Combined effects of ocean acidification, warming, and hypoxia on marine organisms. Limnology and Oceanography e-Lectures 6:1-43. doi:<a href="https://dx.doi.org/10.1002/loe2.10002" target="_blank">10.1002/loe2.10002</a></p>
<p>Depasquale, E., Baumann, H., and Gobler, C.J. (2015) Variation in early life stage vulnerability among Northwest Atlantic estuarine forage fish to ocean acidification and low oxygen Marine Ecology Progress Series 523: 145–156.doi:<a href="http://dx.doi.org/10.3354/meps11142" target="_blank">10.3354/meps11142</a></p>
HYPOA
largerWorkCitation
project
eng; USA
oceans
2017-05-09
2019-07-03
Eastern Long Island Sound, CT, USA
0
BCO-DMO catalogue of parameters from Growth data from static and fluctuating pCO2 x dissolved oxygen (DO) experiments on Menidia menidia
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
http://lod.bco-dmo.org/id/dataset-parameter/777174.rdf
Name: Experiment
Units: unitless
Description: Experiment number
http://lod.bco-dmo.org/id/dataset-parameter/777175.rdf
Name: Treatment
Units: unitless
Description: Experimental treatment/conditions
http://lod.bco-dmo.org/id/dataset-parameter/777176.rdf
Name: Cycling_pattern
Units: unitless
Description: Experimental cycling pattern
http://lod.bco-dmo.org/id/dataset-parameter/777177.rdf
Name: Tank_No
Units: unitless
Description: Tank number
http://lod.bco-dmo.org/id/dataset-parameter/777178.rdf
Name: Hatch_length
Units: millimeters (mm)
Description: Mean size at hatch measured from calibrated images on ImagePRO of a subsample of 10 newly hatched larvae.
http://lod.bco-dmo.org/id/dataset-parameter/777179.rdf
Name: Hatch_length_SE
Units: millimeters (mm)
Description: Standard error of Hatch_length
http://lod.bco-dmo.org/id/dataset-parameter/777180.rdf
Name: Mean_growth_rate
Units: millimeters per day (mm day-1)
Description: Mean post-hatch growth rates to 6/15 days post hatch measured by the difference between the mean size at 6/15dph and the mean size at 0dph measured from calibrated images on ImagePRO.
http://lod.bco-dmo.org/id/dataset-parameter/777181.rdf
Name: Mean_growth_rate_SE
Units: millimeters per day (mm day-1)
Description: Standard error of Mean_growth_rate
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2298
https://darchive.mblwhoilibrary.org/bitstream/1912/24756/1/dataset-777130_growth-pco2-x-do-effects-menidia-menidia__v1.tsv
download
https://doi.org/10.1575/1912/bco-dmo.777130.1
download
onLine
dataset
<p>Wild adults were collected using a 30 x 2 m beach seine and strip-spawned in the laboratory the following day. 100 embryos were then placed in each replicate across 9 recirculating systems of different pCO2 x DO conditions (control, intermediate, extreme) and cycling patterns (static, small diel fluctuation, large diel fluctuation and tidal fluctuation).</p>
<p>pCO2 x DO conditions were measured every hour for each tank and adjusted to the pre-determined conditions via the injection of carbon dioxide, nitrogen gas and/or CO2-stripped air.&nbsp;LabView software (National Instruments) was used to control sampling pumps and gas and water solenoids.</p>
<p>Newly hatched larvae were counted each day with a subsample of 10 larvae preserved in 5% formalin on the first day of hatching to obtain a size at hatch measurements. All surviving larvae to 6 or 15 day post hatch were counted and preserved in 5% formalin. Length measurements were then conducted on calibrated images in ImagePRO up to a month after the end of the experiment.&nbsp;For more details please see Cross et al. (submitted).</p>
Specified by the Principal Investigator(s)
<p>Growth data was processed using R.</p>
Specified by the Principal Investigator(s)
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
Aqualogic Deltastar
Aqualogic Deltastar
PI Supplied Instrument Name: Aqualogic Deltastar PI Supplied Instrument Description:Temperature - Aqualogic thermostats connected to submersible heaters and chillers (Deltastar) Instrument Name: Water Temperature Sensor Instrument Short Name:Water Temp Sensor Instrument Description: General term for an instrument that measures the temperature of the water with which it is in contact (thermometer). Community Standard Description: http://vocab.nerc.ac.uk/collection/L05/current/134/
Hach pHD digital electrode
Hach pHD digital electrode
PI Supplied Instrument Name: Hach pHD digital electrode PI Supplied Instrument Description:pHNIST - Hach pHD digital electrode - calibrated twice weekly using NIST 2-point pH buffers Instrument Name: pH Sensor Instrument Short Name:pH Sensor Instrument Description: An instrument that measures the hydrogen ion activity in solutions.
The overall concentration of hydrogen ions is inversely related to its pH. The pH scale ranges from 0 to 14 and indicates whether acidic (more H+) or basic (less H+).
Metler Toledo G20 Potentiometric Titrator
Metler Toledo G20 Potentiometric Titrator
PI Supplied Instrument Name: Metler Toledo G20 Potentiometric Titrator PI Supplied Instrument Description:Alkalinity – Metler Toledo G20 Potentiometric Titrator calibrated with certified reference material from Dr. Andrew Dickson, University of California San Diego Instrument Name: Automatic titrator Instrument Short Name:Automatic titrator Instrument Description: Instruments that incrementally add quantified aliquots of a reagent to a sample until the end-point of a chemical reaction is reached. Community Standard Description: http://vocab.nerc.ac.uk/collection/L05/current/LAB12/
Hach LDO Model 2
Hach LDO Model 2
PI Supplied Instrument Name: Hach LDO Model 2 PI Supplied Instrument Description:Dissolved oxygen (DO) – Optical DO probe (Hach LDO Model 2) Instrument Name: Dissolved Oxygen Sensor Instrument Short Name:Dissolved Oxygen Sensor Instrument Description: An electronic device that measures the proportion of oxygen (O2) in the gas or liquid being analyzed