BCO-DMO ERDDAP
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Cycle Biosynthetic_pathway ID_2R1 ID_19R1 ID_26R2 ID_31R1 ID_42R2 ID_51R3 ID_62R1 ID_68R4 ID_71R1 ID_81R2 ID_84R6
unitless unitless unitless unitless unitless unitless unitless unitless unitless unitless unitless unitless unitless
3-hydroxypropionate/4-hydroxybutyrate cycle acetyl-CoA carboxylase 0 0 0 0 0 0 0 Methylophilaceae 0 0 0
3-hydroxypropionate/4-hydroxybutyrate cycle methylmalonyl-CoA mutase 0 0 0 0 0 0 0 0 0 Chitinophagaceae; Tepidimonas sp. 0
3-hydroxypropionate/4-hydroxybutyrate cycle 3-hydroxypropionyl-CoA dehydratase/enoyl-CoA hydratase-isomerase family protein (Swissprot/NR) Burkholderiales 0 0 0 0 0 0 Burkholderiales 0 Burkholderiales Burkholderiales
3-hydroxypropionate/4-hydroxybutyrate cycle crotonyl-CoA hydratase (enoyl CoA hydratase; crotonase) 0 0 0 0 0 Pseudomonas sp. 0 Flavobacteriales 0 0 Deltaproteobacteria
3-hydroxypropionate/4-hydroxybutyrate cycle propionyl-CoA carboxylase (acyl CoA carboxylase) 0 0 0 0 0 0 0 Burkolderiales 0 0 Firmicutes
Reductive acetyl-CoA pathway formate dehydrogenase (fdhA) 0 Terrabacteria 0 Flavobacterales 0 Pseudomonas sp., Desulfobacterales 0 0 0 0 Desulfobacteraceae
Reductive acetyl-CoA pathway methylenetetrahydrofolate dehydrogenase Tepidimonas sp. 0 0 0 Tepidimonas sp. 0 0 0 Tepidimonas sp. Clostridium sp. Thermus sp.
3-hydroxypropionate bicycle acetyl-CoA carboxylase biotin carboxyl carrier protein 0 0 0 0 0 Pelagibacterales 0 0 0 0 0
3-hydroxypropionate bicycle acetyl-CoA carboxylase 0 0 0 0 0 0 0 Methylophilaceae 0 0 0
3-hydroxypropionate bicycle succinyl-CoA: (S)-malate CoA-transferase (CoA transeferase) 0 0 0 0 0 0 0 Pseudomonas sp. 0 0 0
3-hydroxypropionate bicycle succinate dehydrogenase/fumarate reductase 0 0 0 0 0 0 0 0 Thermus sp. 0 0
3-hydroxypropionate bicycle 2-methylfumaryl-CoA isomerase 0 0 0 0 0 Gammaproteobacteria 0 0 0 0 0
Reductive tricarboxylic acid cycle (rTCA) aconitate hydratase(can be in TCA and rTCA) Pseudomonas sp. 0 Burkholderiales 0 0 0 0 0 Pseudomonas sp. Pseudomonas sp., Tepidimonas sp. Pseudomonas sp.
Reductive tricarboxylic acid cycle (rTCA) isocitrate dyhydrogenase (used in TCA and rTCA) 0 0 0 0 0 Psychrobacter sp. 0 0 0 0 0
Reductive tricarboxylic acid cycle (rTCA) 2-oxoglutarate dehydrogenase 0 0 0 0 0 0 0 0 0 0 Pseudomonas sp.
Reductive tricarboxylic acid cycle (rTCA) dihydrolipoamide dehydrogenase (dihydrolipoyl dehydrogenase) 0 0 0 0 0 0 0 0 0 Pseudomonas sp. 0
Reductive tricarboxylic acid cycle (rTCA) succinyl-CoA synthetase (succinyl-CoA ligase) (can be used in TCA and rTCA) Pseudomonas sp. 0 0 0 0 0 0 0 0 0 0
Reductive tricarboxylic acid cycle (rTCA) succinate dehydrogenase/fumarate reductase 0 0 0 0 0 0 0 0 Thermus sp. 0 0
Reductive tricarboxylic acid cycle (rTCA) fumarate hydratase (can be used in TCA and rTCA) 0 0 0 0 0 0 0 Pseudomonas sp. 0 0 0
Reductive tricarboxylic acid cycle (rTCA) malate dehydrogenase (malate:quinone oxidoreductase; malic enzyme) 0 0 Clostridiales 0 0 0 0 Pseudomonas sp. 0 0 0
Reductive tricarboxylic acid cycle (rTCA) ATP citrate lyase/CoA ester lyase (Swissprot/NR) 0 0 0 0 0 0 0 Pseudomonas sp. 0 0 0
Dicarboxylate-hydroxybutyrate cycle pyruvate synthase (pyruvate:ferredoxin oxidoreductase) 0 0 0 0 Candidatus Parcubacteria bacterium 0 0 0 0 0 0
Dicarboxylate-hydroxybutyrate cycle pyruvate:water dikinase (phosphoenolpyruvate synthase) 0 0 0 0 0 0 0 Burkholderiales 0 0 0
Dicarboxylate-hydroxybutyrate cycle malate dehydrogenase (malate:quinone oxidoreductase; malic enzyme) 0 0 Clostridiales 0 0 0 0 Pseudomonas sp. 0 0 0
Dicarboxylate-hydroxybutyrate cycle fumarate hydratase 0 0 0 0 0 0 0 Pseudomonas sp. 0 0 0
Dicarboxylate-hydroxybutyrate cycle succinate dehydrogenase/ fumarate reductase 0 0 0 0 0 0 0 0 Thermus sp. 0 0
Dicarboxylate-hydroxybutyrate cycle succinyl-CoA synthetase (succinyl-CoA ligase) Pseudomonas sp. 0 0 0 0 0 0 0 0 0 0
Dicarboxylate-hydroxybutyrate cycle acetyl-CoA C-acetyltransferase 0 0 Chloroflexi 0 0 0 0 Thermus sp., Pseudomonas sp. 0 0 0
Dicarboxylate-hydroxybutyrate cycle crotonyl-CoA hydratase (enoyl-CoA hydratase; crotonase) 0 0 0 0 0 Pseudomonas sp. 0 Flavobacteriales 0 0 Deltaproteobacteria
Nitrogen metabolism nitrogenase iron protein(nifH)/Nitrogen regulatory protein P-II (Swissprot/NR) 0 0 0 Aquaficales 0 0 0 0 0 0 0
Nitrogen metabolism nitrate reductase (narB) (molybdopterin-dependent oxidoreductase family protein) Burkholderiales 0 0 Burkholderiales 0 Pseudomonas sp. 0 0 Burkholderiales 0 0
Nitrogen metabolism nitrate reductase/nitrite oxidoreductase(narG/narH/narZ) 0 0 0 0 0 0 0 0 Rhodobacteraceae 0 0
Nitrogen metabolism nitrite reductase (NAD(P)/FAD-dependent oxidoreductase; nirB) 0 0 0 0 0 Pseudomonas sp. 0 0 0 0 Burkholderiales
Nitrogen metabolism nitrate transport protein NasD (Nitrate ABC transporter) 0 0 0 0 0 0 0 Burkholderiales 0 0 0
Nitrogen metabolism cytochrome c-552 (nitrite reductase nrfA)/cytochrome c (Swissprot/NR) 0 0 0 Tepidimonas sp. 0 Desulfobacterales 0 Tepidomona sp. 0 0 0
Nitrogen metabolism nitrite reductase (nirS) (cytochrome cd1 nitrite reductase) 0 0 0 0 0 0 0 0 0 Acidovorax sp. 0
Nitrogen metabolism nitric oxide reductase transcription regulator NorR 0 0 0 0 0 0 0 Pseudomonas sp. 0 0 0
Nitrogen metabolism nitronate monooxygenase (nmo) 0 0 0 0 0 0 0 0 0 Chitinophagaceae 0
Nitrogen metabolism hydroxylamine reductase (hcp) 0 0 0 0 0 0 0 0 0 0 Candidatus Bathyarchaeota archaeon
Nitrogen metabolism nitrilase/carbon-nitrogen hydrolase family (Swissprot/NR) 0 0 0 0 0 Pseudomonas sp. 0 0 0 Pseudomonas sp. 0
Nitrogen metabolism carbonic anhydrase ( carbonate dehydratase) 0 0 0 0 0 0 0 Pseudomonas sp. Pseudomonas sp. 0 Pseudomonas sp.
Sulfur metabolism Redox-sensitive transcriptional activator SoxR (LysR family transcriptional regulator) 0 0 0 0 0 0 0 0 Pseudomonadaceae 0 0
Sulfur metabolism cytochrome c family protein 0 0 0 0 0 0 0 0 Pseudomonas sp. Burkholderiales Pseudomonas sp.
Sulfur metabolism adenylylsulfate reductase (APS reductase) 0 0 0 0 0 0 0 0 0 0 Desulfobacteraceae
Sulfur metabolism adenylysulfate kinase (APS kinase) 0 0 0 0 0 0 Pseudomonadaceae Pseudomonadaceae 0 0 0
Sulfur metabolism sulfate adenylyltransferase (ATP-sulfurylase; cysN) 0 0 0 0 0 0 0 0 0 Rhodocyclales 0
Sulfur metabolism O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase (aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme) Tepidomonas sp. 0 0 Tepidomonas sp. 0 0 0 Tepidodmonas sp. 0 Tepidomonas sp. 0
Sulfur metabolism serine O-acetyltransferase (serine acetyltransferase; cysE) 0 0 0 0 0 0 0 0 0 Pseudomonas sp. 0
Sulfur metabolism alkanesulfonate monooxygenase (LLM class flavin-dependent oxidoreductase) 0 0 0 0 0 Pseudomonaceae 0 Pseudomonas sp. 0 0 0
Sulfur metabolism cysteine synthase (cysM) 0 0 0 0 0 0 0 0 0 0 Tepidomonas sp.
Sulfur metabolism thiosulfate:quinone oxidoreductase (c-type cytochrome) 0 0 0 0 0 0 0 0 Pseudomonas sp. Pseudomonas sp. 0
Sulfur metabolism methionine gamma lyase 0 0 0 0 0 0 0 Pseudomonas sp. 0 0 0
Hydrogen metabolism [NiFe] hydrogenases Thiobacillus sp. 0 Burkholderiales Burkholderiales 0 0 0 Burkholderiales 0 Thiobacillus sp.; Burkholderiales Thiobacillus sp.; Burkholderiales
Hydrogen metabolism hyp operon (hypB, hybD; required for the maturation of hydrogenases) 0 0 0 0 0 0 Rhodocyclaceae 0 0 Chitinophagaceae 0
Hydrogen metabolism sigma-54-dependent Fis family transcriptional regulator (sigma-54-dependent hydrogenase transcriptional regulator, Fis family; HoxA) 0 0 0 Betaproteobacteria 0 0 0 Betaproteobacteria 0 Burkholderiales 0
Hydrogen metabolism [FeFe] Hydrogenase 0 0 0 0 0 0 0 0 Bacteroidales 0 0
Methane metabolism tetrahydromethanopterin S-methyltransferase (mtrA) 0 0 0 0 0 0 0 Desulfobacterales 0 0 0
Methane metabolism phosphate acetyltransferase (pta) 0 0 0 0 0 Pseudomonas sp. 0 0 0 Pseudomonas sp. 0
Methane metabolism CoB--CoM heterodisulfide reductase subunit C (hdrC)/Hypothetical protein (Swissprot/NR) 0 0 0 0 0 0 0 0 0 0 Desulfobacteraceae
Methane metabolism 2-phosphosulfolactate phosphatase (comB) 0 0 0 0 0 0 0 0 0 Chitinophagaceae 0
Methane metabolism FO synthase/aminofutalosine synthase MqnE (Swissprot/NR) 0 0 0 Mucilaginibacter sp. 0 0 0 0 0 0 0
Methane metabolism dimethyl-sulfide monooxygenase/5,10-methylene tetrahydromethanopterin reductase (Swissprot/NR) 0 0 0 0 0 Pseudomonas sp. 0 0 0 0 0
Methane metabolism formate dehydrogenase (fdh) 0 Terrabacteria 0 Flavobacterales 0 Pseudomonas sp.;Desulfobacteraceae 0 0 0 0 Desulfobacteraceae
Methane metabolism trimethylamine monooxygenase 0 0 0 0 0 0 0 0 0 Sphingomonadales 0
Methane metabolism quinohemoprotein amine dehydrogenase (methylamine dehydrogenase; amine dehydrogenase) 0 0 0 0 0 Pseudomonas sp. 0 0 0 0 0
Methane metabolism S-(hydroxymethyl)glutathione synthase (gfa) 0 0 0 0 0 0 0 0 0 Pseudomonas sp. 0
Methane metabolism serine hydroxymethyltransferase (STHM) 0 0 0 0 0 0 0 0 0 Pseudomonas sp. 0
Methane metabolism NADPH:quinone reductase (qor) 0 0 0 Tepidomonas sp. 0 0 0 0 0 Tepidomonas sp. Pseudomonas sp.
Methane metabolism methanol dehydrogenase/TPM domain-containing protein (Swissprot/NR) Flavobacteriaceae 0 0 0 0 Pseudomonas sp. 0 0 0 0 0
Methane metabolism cytochrome c family protein 0 0 0 0 0 0 0 0 Pseudomonas sp. Burkholderiales Pseudomonas sp.
Methane metabolism Nif3 superfamily (GTP cyclohydrolase I; folE) 0 0 0 0 0 0 Pseudomonas sp. 0 0 0 0
Methane metabolism bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase (folD) 0 0 0 0 0 Pseudomonas sp. 0 0 0 0 0
Methane metabolism alcohol dehydrogenases (adh family) 0 0 Tepidomonas sp. 0 0 0 0 Pseudomonas sp. 0 0 0
Shikimate pathway 3-deoxy-7-phosphoheptulonate synthase (DHAP synthase; aroG/F/H) 0 0 0 0 Nitrospira sp. 0 0 0 0 0 0
Shikimate pathway Shikimate dehydrogenase (aroE) 0 0 Burkholderiales 0 0 Pseudomonas sp. 0 0 0 0 0
Shikimate pathway 3-phosphoshikimate 1-carboxyvinyltransferase (aroA) 0 0 0 0 0 0 0 0 Pseudomonas sp. 0 0
Tryptophan metabolism anthranilate synthase 0 0 0 0 0 0 Burkholderiales 0 0 Chloroflexi Burkholderiales
Tryptophan metabolism tryptophan synthase alpha chain 0 0 Thermus sp. 0 0 0 0 0 0 Tepidimonas sp. 0
Tryptophan metabolism HTH-type transcriptional regulator (TrpI; LysR family transcriptional regulator) 0 0 0 0 0 Pseudomonas sp. 0 0 Pseudomonas sp. 0 0
Tryptophan metabolism arylformamidase (kynurenine formamidase; kynB) Pseudomonas sp. 0 0 0 0 0 0 Pseudomonas sp. 0 0 0
Tryptophan metabolism nitrilase (hydratase) 0 0 Pseudomonas sp. 0 0 0 0 0 0 0 0
Tryptophan metabolism amidase 0 0 Pseudomonas sp. 0 0 0 0 0 0 0 0
Tryptophan metabolism tryptophan 2,3-dioxygenase Pseudomonas sp. 0 0 0 0 0 0 0 0 0 0
Tryptophan metabolism kynureninase (kynU) 0 0 0 0 Hydrogenophaga sp. 0 0 0 0 0 Pseudomonas sp.
Tryptophan metabolism catalase Pseudomonas sp. 0 0 0 0 0 0 Pseudomonas sp. 0 0 0
Tryptophan metabolism catalase-peroxidase 0 0 0 0 0 Pseudomonas sp. 0 Pseudomonas sp. 0 0 Tepidimonas sp.
Tryptophan metabolism 2-oxoglutarate dehydrogenase E1 component 0 0 0 0 0 0 0 0 0 0 Pseudomonas sp.
Tryptophan metabolism crotonyl-CoA hydratase (enoyl-CoA hydratase; crotonase) 0 0 0 0 0 Pseudomonas sp. 0 Flavobacteriales 0 0 Deltaproteobacteria
Tryptophan metabolism 3-hydroxyacyl-CoA dehydrogenase (fadJ) 0 0 0 0 0 0 0 0 Deltaproteobacteria Alteromonadaceae 0
Tryptophan metabolism acetyl-CoA C-acetyltransferase 0 0 Chloroflexi 0 0 0 0 Pseudomonas sp., Thermus sp. 0 0 0
Phenylalanine metabolism phenylalanine dehydrogenase (Glu/Leu/Phe/Val dehydrogenase) Pseudomonas sp. 0 0 0 0 0 0 0 0 0 0
Phenylalanine metabolism D-amino-acid dehydrogenase 0 0 0 0 0 Pseudomonas sp. 0 0 0 0 0
Phenylalanine metabolism aralkylamine dehydrogenase light chain/methylamine dehydrogenase (Swissprot/NR) 0 0 0 0 Pseudomonas sp. 0 0 0 0 0 0
Phenylalanine metabolism catalase-peroxidase 0 0 0 0 0 Pseudomonas sp. 0 Pseudomonas sp. 0 0 Tepidimonas sp.
Phenylalanine metabolism 4-hydroxyphenylpyruvate dioxygenase 0 0 0 0 0 Pseudomonas sp. 0 0 0 0 Pseudomonas sp.
Phenylalanine metabolism phenylacetaldehyde dehydrogenase (aldehyde dehydrogenase family) Pseudomonas sp. 0 Pseudomonas sp. 0 Pseudomonas sp. Pseudomonas sp. 0 Pseudomonas sp. 0 0 0
Phenylalanine metabolism amidase 0 0 Pseudomonas sp. 0 0 0 0 0 0 0 0
Phenylalanine metabolism 1,2-phenylacetyl-CoA epoxidase 0 0 0 0 0 Pseudomonas sp. 0 0 0 0 0
Phenylalanine metabolism oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase (phenylacetic acid degradation bifunctional protein PaaZ) Pseudomonas sp. 0 0 0 0 0 0 0 0 0 0
Phenylalanine metabolism crotonyl-CoA hydratase (enoyl-CoA hydratase; crotonase) 0 0 0 0 0 Pseudomonas sp. 0 Flavobacteriales 0 0 Deltaproteobacteria
Phenylalanine metabolism 3-hydroxybutyryl-CoA dehydrogenase 0 0 0 0 0 0 0 0 0 Alternaria sp. (Fungal strain) 0
Phenylalanine metabolism 3,4-dihydroxyphenylacetate 2,3-dioxygenase 0 0 0 0 0 0 0 0 0 Hydrogenophaga sp. 0
Phenylalanine metabolism 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase (4-hydroxy-2-oxoheptanedioate aldolase) 0 0 0 0 0 0 0 Pseudomonas sp. 0 0 Pseudomonas sp.
Phenylalanine metabolism branched-chain amino acid aminotransferase (ilvE)/D-amino-acid transaminase (Swissprot/NR) 0 0 0 0 0 0 0 0 0 Sphingomonadales 0
Tyrosine metabolism phenylalanine dehydrogenase (Glu/Leu/Phe/Val dehydrogenase) Pseudomonas sp. 0 0 0 0 0 0 0 0 0 0
Tyrosine metabolism aralkylamine dehydrogenase light chain/methylamine dehydrogenase (Swissprot/NR) 0 0 0 0 Pseudomonas sp. 0 0 0 0 0 0
Tyrosine metabolism 4-hydroxyphenylpyruvate dioxygenase 0 0 0 0 0 0 0 0 0 0 Pseudomonas sp.
Tyrosine metabolism anthranilate 3-monooxygenase oxygenase component/4-hydroxyphenylacetate 3-monooxygenase reductase component/Aromatic ring hydroxylase 0 0 0 Pseudomonas sp. 0 0 0 0 0 0 Pseudomonas sp.
Tyrosine metabolism 3,4-dihydroxyphenylacetate 2,3-dioxygenase 0 0 0 0 0 0 0 0 0 Hydrogenophaga sp. 0
Tyrosine metabolism homogentisate 1,2-dioxygenase 0 0 0 0 Pseudomonas sp. 0 0 Pseudomonas sp. Rhodospiralles 0 0
Tyrosine metabolism 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase (4-hydroxy-2-oxoheptanedioate aldolase) 0 0 0 0 0 0 0 Pseudomonas sp. 0 0 Pseudomonas sp.
Phenazine biosynthesis trans-2,3-dihydro-3-hydroxyanthranilate isomerase (phzF) 0 0 0 0 0 0 0 Pseudomonas sp. 0 0 0
Phenazine biosynthesis anthranilate synthase 0 0 0 0 0 0 Burkholderiales 0 0 Chloroflexi Burkholderiales
D-alanine metabolism alanine racemase Pseudomonas sp. 0 0 0 0 0 0 0 0 0 0
D-alanine metabolism D-alanine transaminase Thermus sp. 0 0 0 0 0 0 0 0 0 0
D-alanine metabolism D-alanine-D-alanine ligase 0 0 0 0 0 0 Pseudomonas sp. Pseudomonas sp. 0 0 0
D-glutamate D-glutamine metabolism glutamate synthase 0 0 0 0 0 0 0 0 Pseudomonas sp. 0 Burkholderiales
D-glutamate D-glutamine metabolism glutamate racemase 0 0 0 0 0 Pseudomonas sp. 0 Pseudomonas sp. 0 0 0
D-glutamate D-glutamine metabolism glutamine synthetase (glutamate-ammonia ligase) 0 0 0 0 0 0 0 Pseudomonas sp. 0 0 0
D-glutamate D-glutamine metabolism glutaminase 0 0 Actinobacteria 0 0 0 0 0 0 0 Pseudomonas sp.
Isoleucine metabolism (R)-citramalate synthase (cimA) 0 0 0 0 0 0 0 0 Thermus sp. 0 0
Isoleucine metabolism 3-isopropylmalate dehydrogenase 0 0 0 0 0 0 0 0 0 0 Pseudomonas sp.
Isoleucine metabolism acetolactate synthase I/II/III large subunit (ilvB) 0 0 0 0 0 0 0 0 0 0 Terrabacteria
Isoleucine metabolism ketol-acid reductoisomerase (ilvC) Pseudomonas sp. 0 0 0 0 0 0 0 Pseudomonas sp. 0 0
Isoleucine metabolism branched-chain amino acid aminotransferase (ilvE)/D-amino-acid transaminase (Swissprot/NR) 0 0 0 0 0 0 0 0 0 Sphingomonadales 0
Isoleucine metabolism 2-oxoisovalerate dehydrogenase E1 component alpha subunit (3-methyl-2-oxobutanoate dehydrogenase) 0 0 0 0 0 0 Pseudomonas sp. Pseudomonas sp. 0 Pseudomonas sp. Sphingomonadaceae
Isoleucine metabolism acyl-CoA dehydrogenase 0 0 0 0 0 0 0 Pseudomonas sp. 0 Chitinophagaceae Pseudomonas sp.
Isoleucine metabolism crotonyl-CoA hydratase (enoyl-CoA hydratase; crotonase) 0 0 0 0 0 Pseudomonas sp. 0 Flavobacteriales 0 0 Deltaproteobacteria
Isoleucine metabolism 3-hydroxyacyl-CoA dehydrogenase (fadJ) 0 0 0 0 0 0 0 0 Deltaproteobacteria Alteromonadaceae 0
Isoleucine metabolism 3-ketoacyl-CoA thiolase (acetyl-CoA acyltransferase) Tepidimonas sp. 0 0 0 0 0 0 Burkholderiales 0 Tepidimonas sp. Rhodocyclaceae
Leucine metabolism acetolactate synthase I/II/III large subunit (ilvB) 0 0 0 0 0 0 0 0 0 0 Terrabacteria
Leucine metabolism ketol-acid reductoisomerase (ilvC) Pseudomonas sp. 0 0 0 0 0 0 0 Pseudomonas sp. 0 0
Leucine metabolism 3-isopropylmalate dehydrogenase 0 0 0 0 0 0 0 0 0 0 Pseudomonas sp.
Leucine metabolism branched-chain amino acid aminotransferase (ilvE)/D-amino-acid transaminase (Swissprot/NR) 0 0 0 0 0 0 0 0 0 Sphingomonadales 0
Leucine metabolism 2-oxoisovalerate dehydrogenase E1 component alpha subunit (3-methyl-2-oxobutanoate dehydrogenase) 0 0 0 0 0 0 Pseudomonas sp. Pseudomonas sp. 0 Pseudomonas sp. Sphingomonadaceae
Leucine metabolism acyl-CoA dehydrogenase 0 0 0 0 0 0 0 Pseudomonas sp. 0 Chitinophagaceae Pseudomonas sp.
Leucine metabolism crotonyl-CoA hydratase (enoyl-CoA hydratase; crotonase) 0 0 0 0 0 Pseudomonas sp. 0 Flavobacteriales 0 0 Deltaproteobacteria
Leucine metabolism 3-oxoacid CoA-transferase 0 0 0 0 0 0 0 0 0 Sphingomonadales 0
Leucine metabolism 3-ketoacyl-CoA thiolase (acetyl-CoA acyltransferase) Tepidimonas sp. 0 0 0 0 0 0 Burkholderiales 0 Tepidimonas sp. Rhodocyclaceae
Valine metabolism acetolactate synthase I/II/III large subunit (ilvB) 0 0 0 0 0 0 0 0 0 0 Terrabacteria
Valine metabolism ketol-acid reductoisomerase (ilvC) Pseudomonas sp. 0 0 0 0 0 0 0 Pseudomonas sp. 0 0
Valine metabolism branched-chain amino acid aminotransferase (ilvE)/D-amino-acid transaminase (Swissprot/NR) 0 0 0 0 0 0 0 0 0 Sphingomonadales 0
Valine metabolism valine-pyruvate aminotransferase 0 0 0 0 Psychrobacter sp. 0 0 0 0 0 0
Valine metabolism 2-oxoisovalerate dehydrogenase E1 component alpha subunit (3-methyl-2-oxobutanoate dehydrogenase) 0 0 0 0 0 0 Pseudomonas sp. Pseudomonas sp. 0 Pseudomonas sp. Sphingomonadaceae
Valine metabolism acyl-CoA dehydrogenase 0 0 0 0 0 0 0 Pseudomonas sp. 0 Chitinophagaceae Pseudomonas sp.
Valine metabolism crotonyl-CoA hydratase (enoyl-CoA hydratase; crotonase) 0 0 0 0 0 Pseudomonas sp. 0 Flavobacteriales 0 0 Deltaproteobacteria
Valine metabolism 3-hydroxyacyl-CoA dehydrogenase (fadJ) 0 0 0 0 0 0 0 0 Deltaproteobacteria Alteromonadaceae 0
Valine metabolism beta-alanine-pyruvate transaminase (aspartate aminotransferase family protein) 0 0 0 0 0 0 0 Pseudomonas sp. 0 0 0
Valine metabolism methylmalonate-semialdehyde dehydrogenase (CoA-acylating methylmalonate-semialdehyde dehydrogenase) 0 0 0 0 0 0 0 Pseudomonas sp. Pseudomonas sp. 0 0
Valine metabolism methylmalonyl-CoA mutase 0 0 0 0 0 0 0 0 0 Chitinophagaceae; Tepidimonas sp. 0
Serine metabolism serine O-acetyltransferase (serine acetyltransferase; cysE) 0 0 0 0 0 0 0 0 0 Pseudomonas sp. 0
Serine metabolism hydroxypyruvate reductase (bifunctional glyoxylate/hydroxypyruvate reductase) 0 0 0 Pseudomona sp. 0 0 0 0 0 0 0
Serine metabolism 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 0 0 0 Pseudomonas sp. 0 Actinobacteria 0 0 0 0 Flavobacteriia
Serine metabolism D-3-phosphoglycerate dehydrogenase (PHGDH) 0 0 0 0 0 0 0 0 Spirochaetaceae 0 0
Serine metabolism phosphoserine aminotransferase 0 0 0 0 Pseudomonas sp. 0 0 0 0 0 0
Serine metabolism phosphoserine phosphatase 0 0 Pseudomonas sp. 0 0 0 0 Nitrososphaeraceae 0 0 0
Serine metabolism tryptophan synthase alpha chain 0 0 Thermus sp. 0 0 0 0 0 0 Tepidimonas sp. 0
Serine metabolism glycine hydroxymethyltransferase 0 0 0 0 0 0 0 0 0 Pseudomonas sp. 0
Serine metabolism threonine aldolase 0 0 0 0 0 0 0 0 0 0 Pseudomonas sp.
Serine metabolism 3-hydroxy acid dehydrogenase (ydfG)/carboxymuconolactone decarboxylase family protein (Swissprot/NR) 0 0 0 0 0 0 0 0 Pseudomonas sp. 0 0
Serine metabolism threonine synthase Acidobacteria 0 0 0 0 0 0 0 0 0 0
Serine metabolism aspartate kinase 0 0 0 0 0 0 0 Pseudomonas sp. Rhodospirillaceae 0 0
Serine metabolism serine hydroxymethyltransferase (STHM) 0 0 0 0 0 0 0 0 0 Pseudomonas sp. 0
Serine metabolism L-serine ammonia-lyase/choline dehydrogenase (Swissprot/NR) 0 0 Flavobacteriia 0 0 0 0 0 0 0 0
homoserine metabolism aspartate kinase 0 0 0 0 0 0 0 Pseudomonas sp. Rhodospirillaceae 0 0
homoserine metabolism homoserine lactone efflux protein/LysE family translocator (Swissprot/NR) 0 0 0 0 0 Pseudomonas sp. 0 0 0 0 0
homoserine metabolism threonine synthase Acidobacteria 0 0 0 0 0 0 0 0 0 0
homoserine metabolism homoserine O-acetyltransferase (metXA; metXS) 0 0 0 0 0 0 0 0 0 Pseudomonas sp. 0
homoserine metabolism O-succinylhomoserine sulfhydrylase (metZ) 0 0 0 0 0 Pseudomonas sp. 0 0 0 0 0
beta-alanine metabolism polyamine aminopropyltransferase (spermidine synthase; speE) 0 0 0 0 0 Chromatiales 0 0 0 0 0
beta-alanine metabolism dihydropyrimidinase 0 0 0 0 0 0 0 Pseudomonas sp. 0 0 0
beta-alanine metabolism beta-alanine-pyruvate transaminase (omega amino acid--pyruvate aminotransferase) 0 0 0 0 0 0 0 Pseudomonas sp. 0 0 0
beta-alanine metabolism crotonyl-CoA hydratase (enoyl-CoA hydratase; crotonase) 0 0 0 0 0 Pseudomonas sp. 0 Flavobacteriales 0 0 Deltaproteobacteria
beta-alanine metabolism acyl-CoA dehydrogenase 0 0 0 0 0 0 0 Pseudomonas sp. 0 Chitinophagaceae Pseudomonas sp.
Peptidases aminopeptidases 0 0 0 Pseudomonas sp. 0 0 0 Pseudomonas sp. Pseudomonas sp. Pseudomonas sp. 0
Peptidases carboxypeptidases 0 0 0 0 0 0 Pseudomonas sp. 0 0 0 0
Peptidases DD-endopeptidases 0 0 0 0 0 Pseudomonas sp. Pseudomonas sp. 0 0 0 0
Peptidases endopeptidases in PG degradation (oligopeptidases) Thermus sp. 0 0 Thermus sp. 0 0 0 Thermus sp. 0 0 0
Peptidases hydrolases/peptidases 0 0 0 Pseudomonas sp. Pseudomonas sp. 0 0 0 0 0 0
B12 biosynthesis cobalt-precorrin-6A reductase (cbiJ) 0 0 0 0 0 0 0 Chroococcidiopsis sp. 0 0 0
B12 biosynthesis Uroporphyrinogen-III C-methyltransferase (cobA/cysG) 0 0 0 0 0 0 Pseudomonas sp. 0 0 0 0
B12 biosynthesis cobalt-precorrin-8 methylmutase (cbiC) Thermus sp. 0 0 0 0 0 0 0 0 0 0
B12 biosynthesis precorrin-4 C(11)-methyltransferase (cobM) 0 0 0 0 0 0 0 0 0 Pseudomonas sp. 0
B12 biosynthesis adenosylcobinamide-GDP ribazoletransferase (cobS) 0 0 0 0 0 0 0 Pseudomonas sp. 0 0 0
B12 biosynthesis cobyrinic acid a,c-diamide synthase (cobB) (ParA family; ParA nucleotide binding domain) Thermus sp. 0 0 Pseudomona sp. 0 0 0 0 0 Burkholderiales Burkholderiales
B12 biosynthesis cobalamin biosynthesis protein (cobD) 0 0 0 0 0 Pseudomonas sp. 0 0 0 0 0
B12 biosynthesis cobyric acid synthase (cobQ) 0 0 0 0 0 Pseudomonas sp. 0 0 0 0 0
B12 biosynthesis Uroporphyrinogen III decarboxylase (heme b biosynthesis) 0 0 0 0 0 Acinetobacter sp., Proteobacteria 0 0 0 Pseudomonas  sp. 0
Vitamin E biosynthesis 4-hydroxyphenylpyruvate dioxygenase 0 0 0 0 0 0 0 0 0 0 Pseudomonas sp.
beta-oxidation to propionyl-CoA 3-ketoacyl-CoA thiolase (acetyl-CoA acyltransferase) Tepidimonas sp. 0 0 0 0 0 0 Burkholderiales 0 Tepidimonas sp. Rhodocyclaceae
beta-oxidation to propionyl-CoA 3-hydroxyacyl-CoA dehydrogenase (fadJ) 0 0 0 0 0 0 0 0 Deltaproteobacteria Alteromonadaceae 0
beta-oxidation to propionyl-CoA acyl-CoA dehydrogenase 0 0 0 0 0 0 0 Pseudomonas sp. 0 Chitinophagaceae Pseudomonas sp.
a-ketobutarte to propionyl-CoA 2-oxoisovalerate dehydrogenase E1 component alpha subunit (3-methyl-2-oxobutanoate dehydrogenase) 0 0 0 0 0 0 Pseudomonas sp. Pseudomonas sp. 0 Pseudomonas sp. Sphingomonadaceae
a-ketobutarte to propionyl-CoA acetyl-CoA carboxylase 0 0 0 0 0 0 0 Methylophilaceae 0 0 0
a-ketobutarte to propionyl-CoA propionyl-CoA carboxylase (acyl CoA carboxylase) 0 0 0 0 0 0 0 Burkolderiales 0 0 Firmicutes
a-ketobutarte to propionyl-CoA methylmalonyl-CoA mutase 0 0 0 0 0 0 0 0 0 Chitinophagaceae; Tepidimonas sp. 0
Polyhydroxyalkanoate (PHA) production phaC Pseudomonas  sp. 0 0 0 0 0 0 Pseudomonas  sp. 0 Pseudomonas sp. 0
aromatic degradation 4-oxalmesaconate hydratase/PIG-L family deacetylase (Swissprot/NR) 0 0 0 Thermus sp. 0 0 0 0 0 0 0
aromatic degradation 4-carboxymuconolactone decarboxylase 0 0 0 0 0 0 0 0 0 Betaproteobacteria 0
aromatic degradation catechol 2,3-dioxygenase (metapyrocatechase 2; VOC family protein) 0 0 0 0 0 0 0 0 0 Tepidimonas sp. 0
aromatic degradation muconate cycloisomerase 0 0 0 0 0 0 0 0 0 0 Pseudomonas sp.
aromatic degradation 3-oxoadipate CoA-transferase alpha subunit (CoA transferases) 0 0 0 0 0 0 Pseudomonas sp. 0 0 0 0
aromatic degradation 3-ketoacyl-CoA thiolase (acetyl-CoA acyltransferase) Tepidimonas sp. 0 0 0 0 0 0 Burkholderiales 0 Tepidimonas sp. Rhodocyclaceae
aromatic degradation probable tautomerase (tautomerase family protein) 0 0 Pseudomonas sp. 0 0 0 0 0 0 0 0
aromatic degradation 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase (paaZ) 0 0 0 0 0 0 0 0 0 0 Burkholderiales
aromatic degradation 3-hydroxyacyl-CoA dehydrogenase (fadJ) 0 0 0 0 0 0 0 0 Deltaproteobacteria Alteromonadaceae 0
aromatic degradation crotonyl-CoA hydratase (enoyl-CoA hydratase; crotonase) 0 0 0 0 0 Pseudomonas sp. 0 Flavobacteriales 0 0 Deltaproteobacteria
aromatic degradation 3-hydroxybutyryl-CoA dehydrogenase 0 0 0 0 0 0 0 0 0 Alternaria sp. (Fungal strain) 0
aromatic degradation benzoate membrane transporters 0 0 0 0 0 0 0 0 0 Pseudomonas sp. Pseudomonas sp.
aromatic degradation 3-oxoacid CoA-transferase 0 0 0 0 0 0 0 0 0 Sphingomonadales 0
polycyclic aromatic hydrocarbon (PAH) degradation methyl-accepting chemotaxis protein NahY 0 0 0 0 0 0 0 0 Pseudomonas sp. 0 0
polycyclic aromatic hydrocarbon (PAH) degradation Phthalate transporter/MFS transporter (Swissprot/NR) 0 0 0 0 0 0 0 0 0 Pseudomonas sp. 0
chemotaxis methyl-accepting chemotaxis protein McpA 0 0 0 0 0 0 0 Pseudomonas sp. 0 0 0
chemotaxis methyl-accepting chemotaxis protein McpB 0 0 0 0 0 0 0 Pseudomonas sp. 0 0 0
chemotaxis methyl-accepting chemotaxis protein McpG 0 0 0 Pseudomonas sp. 0 0 0 0 0 0 0
chemotaxis methyl-accepting chemotaxis protein McpP 0 0 0 0 0 Pseudomonas sp. 0 0 0 0 0
chemotaxis methyl-accepting chemotaxis protein McpQ 0 0 0 0 0 0 0 0 0 Pseudomonas sp. 0
chemotaxis methyl-accepting chemotaxis protein McpS 0 0 0 0 Pseudomonas sp. 0 0 0 0 0 0
chemotaxis methyl-accepting chemotaxis protein McpU 0 0 0 0 0 0 0 Pseudomonas sp. 0 0 0
chemotaxis methyl-accepting chemotaxis protein 4/diguanylate synthase 0 0 0 0 0 Deltaproteobacteria 0 0 0 0 0
chemotaxis chemotaxis protein CheY/response regulator 0 0 Deltaproteobacteria 0 0 0 0 0 0 0 0
chemotaxis methyl-accepting chemotaxis protein TlpA Pseudomonas sp. 0 0 0 0 0 0 0 0 0 0
chemotaxis methyl-accepting chemotaxis protein PctA 0 0 0 0 0 Pseudomonas sp. 0 Pseudomonas sp. 0 0 0
chemotaxis methyl-accepting chemotaxis protein PA2652 0 0 Pseudomonas sp. 0 Pseudomonas sp. Pseudomonas sp. 0 0 Pseudomonas sp. Pseudomonas sp. 0
peptidoglycan biosynthesis UDP-N-acetylenolpyruvoylglucosamine reductase (UDP-N-acetylmuramate dehydrogenase; murB) 0 0 0 0 Cyanobacteria 0 0 0 0 0 0
peptidoglycan biosynthesis UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (murF) 0 0 0 0 0 Pseudomonas sp. 0 0 0 0 0
peptidoglycan degradation transglycosylase 0 0 0 0 0 Desulfobacteraceae 0 0 0 0 0
cell-cell communication Oligopeptide transport ATP-binding protein Opp; Oligopeptide transport ATP-binding protein AppD; (ABC transporter ATP-binding protein) 0 0 0 0 0 0 0 0 Tepidimonas sp. Tepidimonas sp. 0
cell-cell communication oligopeptide transport ATP-binding protein AppD 0 0 0 0 0 0 0 0 0 0 Bacillales
cell-cell communication Acyl-homoserine lactone acylase/acylase (Swissprot/NR) 0 0 0 Pseudomonas sp. 0 Pseudomonas sp. 0 0 0 Pseudomonas sp. 0
cell-cell communication anthranilate synthase 0 0 0 0 0 0 Burkholderiales 0 0 Chloroflexi Burkholderiales
cell-cell communication HTH-type transcriptional regulator (TrpI; LysR family transcriptional regulator) 0 0 0 0 0 Pseudomonas sp. 0 0 0 0 0
antimicrobial defense beta-lactamase (Metal Beta Lactamase (MBL)-fold metallohydrolase domain) 0 0 0 0 0 0 0 Burkholderiales 0 0 0
antimicrobial defense AcrB/AcrD/AcrF family protein (efflux RND transporter) 0 0 0 Tepidimonas sp. 0 0 0 0 0 Tepidimonas sp., Pseudomonas sp. 0
antibiotic production Bacitracin/Gramicidin/Tyrocidine synthase (nonribosomal peptide synthases; antibiotic synthesis) 0 0 Pseudomonas sp. Pseudomonas sp. Pseudomonas sp. Pseudomonas sp. Pseudomonas sp. Pseudomonas sp. Pseudomonas sp. Pseudomonas sp. Pseudomonas sp.
antibiotic production gramicidin synthase subunit D 0 0 0 0 0 0 0 Pseudomonas sp. 0 Pseudomonas sp. 0
phosphate regulon (pho regulon) Pst phosphate transporter 0 0 0 Pseudomonas sp. 0 Pseudomonas sp. Pseudomonas sp. Pseudomonas sp. 0 0 Pseudomonas sp.
phosphate regulon (pho regulon) phosphate starvation-inducible protein PsiF Pseudomonas sp. 0 0 0 0 0 0 Pseudomonas sp. 0 0 0
potassium trasnsporters (K+ transporters) Trk system potassium uptake protein TrkI/Trk system potassium uptake protein TrkH 0 0 0 0 0 0 0 Burkholderiales, Tepidimonas sp. 0 Burkholderiales 0
potassium trasnsporters (K+ transporters) potential sensor protein KdpD 0 0 0 0 0 0 0 0 Pseudomonas sp. 0 Betaproteobacteria
potassium trasnsporters (K+ transporters) K+-transporting ATPase ATPase B chain (KdpB) 0 0 0 0 0 0 0 0 Pseudomonas sp. 0 0
potassium trasnsporters (K+ transporters) K+-transporting ATPase ATPase C chain (KdpC) 0 0 0 0 0 Pseudomonas sp. 0 0 0 0 0
potassium trasnsporters (K+ transporters) K+-transporting ATPase ATPase A chain (KdpA) 0 0 0 0 0 0 0 Pseudomonas sp. 0 0 0
oxidative stress defense mechanism catalase Pseudomonas sp. 0 0 0 0 0 0 Pseudomonas sp. 0 0 0
oxidative stress defense mechanism catalase-peroxidase 0 0 0 0 0 Pseudomonas sp. 0 Pseudomonas sp. 0 0 Tepidimonas sp.
oxidative stress defense mechanism alkyl hydroperoxide reductase subunit C 0 0 0 0 0 0 0 Pseudomonas sp. 0 0 0

 
ERDDAP, Version 2.02
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