Accessing BCO-DMO data
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BCO-DMO ERDDAP
Accessing BCO-DMO data |
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| Dataset Title: | [Geneflow Profile] - Temperature, salinity, water isotope, and inorganic nutrient profiles of sea ice core sections collected offshore near Utqiaġvik, Alaska, USA in May 2017 and 2018. (Understanding How Virus Infection Affects Gene Flow and Microbial Evolution in Extreme Polar Environments) 
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| Institution: | BCO-DMO (Dataset ID: bcodmo_dataset_816755) |
| Information: | Summary
| License
| FGDC
| ISO 19115
| Metadata
| Background
| Files
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Attributes {
s {
sheet_name {
String bcodmo_name "unknown";
String description "name of the sheet in the source file";
String long_name "Sheet Name";
String units "unitless";
}
location {
String bcodmo_name "unknown";
String description "text description of the location";
String long_name "Location";
String units "unitless";
}
latitude {
String _CoordinateAxisType "Lat";
Float64 _FillValue NaN;
Float64 actual_range 71.3729, 71.473;
String axis "Y";
String bcodmo_name "latitude";
Float64 colorBarMaximum 90.0;
Float64 colorBarMinimum -90.0;
String description "latitude with positive values indicating North";
String ioos_category "Location";
String long_name "Latitude";
String nerc_identifier "https://vocab.nerc.ac.uk/collection/P09/current/LATX/";
String standard_name "latitude";
String units "degrees_north";
}
longitude {
String _CoordinateAxisType "Lon";
Float64 _FillValue NaN;
Float64 actual_range -156.7294, -156.5049;
String axis "X";
String bcodmo_name "longitude";
Float64 colorBarMaximum 180.0;
Float64 colorBarMinimum -180.0;
String description "longitude with negative values indicating West";
String ioos_category "Location";
String long_name "Longitude";
String nerc_identifier "https://vocab.nerc.ac.uk/collection/P09/current/LONX/";
String standard_name "longitude";
String units "degrees_east";
}
date {
String bcodmo_name "date";
String description "date presented following ISO-8601 format";
String long_name "Date";
String nerc_identifier "https://vocab.nerc.ac.uk/collection/P01/current/ADATAA01/";
String source_name "date";
String time_precision "1970-01-01";
String units "unitless";
}
Sea_ice_depth {
String bcodmo_name "depth_core";
String description "depth in sea ice";
String long_name "Sea Ice Depth";
String units "centimeters (cm)";
}
Bulk_salinity {
String bcodmo_name "sal";
String description "Bulk salinity by conductivity meters";
String long_name "Bulk Salinity";
String nerc_identifier "https://vocab.nerc.ac.uk/collection/P01/current/PSALST01/";
String units "unitless";
}
UAF_Mass_Balance_Temperature {
String bcodmo_name "temperature";
String description "UAF Mass Balance Temperature";
String long_name "UAF Mass Balance Temperature";
String nerc_identifier "https://vocab.nerc.ac.uk/collection/P01/current/TEMPP901/";
String units "degrees Celsius (C)";
}
PO4 {
Float32 _FillValue NaN;
Float32 actual_range 0.05, 5.9;
String bcodmo_name "PO4";
String description "PO4";
String long_name "Mass Concentration Of Phosphate In Sea Water";
String units "microMole (uM)";
}
SiO4 {
Float32 _FillValue NaN;
Float32 actual_range 0.406, 5.7;
String bcodmo_name "SiO4";
String description "SiO4";
String long_name "Si O4";
String nerc_identifier "https://vocab.nerc.ac.uk/collection/P01/current/SLCAAAZX/";
String units "microMole (uM)";
}
NO3 {
Float32 _FillValue NaN;
Float32 actual_range 0.22, 10.24;
String bcodmo_name "NO3";
Float64 colorBarMaximum 50.0;
Float64 colorBarMinimum 0.0;
String description "NO3";
String long_name "Mole Concentration Of Nitrate In Sea Water";
String nerc_identifier "https://vocab.nerc.ac.uk/collection/P01/current/NTRAIGGS/";
String units "microMole (uM)";
}
NO2 {
Float32 _FillValue NaN;
Float32 actual_range 0.027, 0.23;
String bcodmo_name "NO2";
Float64 colorBarMaximum 1.0;
Float64 colorBarMinimum 0.0;
String description "NO2";
String long_name "Mole Concentration Of Nitrite In Sea Water";
String nerc_identifier "https://vocab.nerc.ac.uk/collection/P01/current/NTRIAAZX/";
String units "microMole (uM)";
}
NH4 {
Float32 _FillValue NaN;
Float32 actual_range 0.15, 4.86;
String bcodmo_name "Ammonium";
Float64 colorBarMaximum 5.0;
Float64 colorBarMinimum 0.0;
String description "NH4";
String long_name "Mole Concentration Of Ammonium In Sea Water";
String nerc_identifier "https://vocab.nerc.ac.uk/collection/P01/current/AMONAAZX/";
String units "microMole (uM)";
}
d2H {
Float32 _FillValue NaN;
Float32 actual_range -8.154, 4.201;
String bcodmo_name "d2H";
String description "delta 2 H";
String long_name "D2 H";
String units "parts per thousand (o/oo)";
}
d18O {
Float32 _FillValue NaN;
Float32 actual_range -1.455, 1.0;
String bcodmo_name "delta18O";
String description "delta 18 O";
String long_name "D18 O";
String units "parts per thousand (o/oo)";
}
notes {
String bcodmo_name "comment";
String description "comments";
String long_name "Notes";
String units "unitless";
}
}
NC_GLOBAL {
String access_formats ".htmlTable,.csv,.json,.mat,.nc,.tsv,.esriCsv,.geoJson";
String acquisition_description
"Sea ice cores were collected at 71.2944\\u02daN, 156.7153\\u02daW and
71.3729\\u02daN, 156.5073\\u02daW in May 2017 and at 71.4730\\u02daN,
156.7294\\u02daW in May 2018. Sea ice cores were drilled with a MARK II ice
auger (Kovacs Enterprise). The cores were sectioned immediately after
collection with a clean rust-proof, custom alloy bow saw in the field in 5 cm
sections and each was collected in sterile Whirlpak\\u00ae bags. Core sections
were melted at room temperature before volumes were allocated for nutrient,
water isotope, and bulk salinity measurements. Analytical measurements were
made upon sample return to the University of Washington and to the University
of Alaska Fairbanks. Associated temperature profile data were acquired from
the nearby UAF Sea Ice Mass Balance site.";
String awards_0_award_nid "789279";
String awards_0_award_number "GBMF5488";
String awards_0_data_url "https://www.moore.org/grant-detail?grantId=GBMF5488";
String awards_0_funder_name "Gordon and Betty Moore Foundation: Marine Microbiology Initiative";
String awards_0_funding_acronym "MMI";
String awards_0_funding_source_nid "385";
String cdm_data_type "Other";
String comment
"Profile data for gene flow in arctic subzero brines
PI: Jody W. Deming
Version: 2020-06-10";
String Conventions "COARDS, CF-1.6, ACDD-1.3";
String creator_email "info@bco-dmo.org";
String creator_name "BCO-DMO";
String creator_type "institution";
String creator_url "https://www.bco-dmo.org/";
String data_source "extract_data_as_tsv version 2.3 19 Dec 2019";
String dataset_current_state "Final and no updates";
String date_created "2020-06-25T15:56:13Z";
String date_modified "2020-07-16T14:18:21Z";
String defaultDataQuery "&time<now";
String doi "10.26008/1912/bco-dmo.816755.1";
Float64 Easternmost_Easting -156.5049;
Float64 geospatial_lat_max 71.473;
Float64 geospatial_lat_min 71.3729;
String geospatial_lat_units "degrees_north";
Float64 geospatial_lon_max -156.5049;
Float64 geospatial_lon_min -156.7294;
String geospatial_lon_units "degrees_east";
String history
"2024-11-23T17:25:53Z (local files)
2024-11-23T17:25:53Z https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_816755.html";
String infoUrl "https://www.bco-dmo.org/dataset/816755";
String institution "BCO-DMO";
String keywords "ammonia, ammonium, balance, bco, bco-dmo, biological, bulk, Bulk_salinity, chemical, chemistry, concentration, d18, d18O, d2H, data, dataset, date, depth, dmo, earth, Earth Science > Oceans > Ocean Chemistry > Ammonia, Earth Science > Oceans > Ocean Chemistry > Nitrate, Earth Science > Oceans > Ocean Chemistry > Phosphate, erddap, ice, latitude, longitude, management, mass, mass_concentration_of_phosphate_in_sea_water, mole, mole_concentration_of_ammonium_in_sea_water, mole_concentration_of_nitrate_in_sea_water, mole_concentration_of_nitrite_in_sea_water, n02, name, nh4, nitrate, nitrite, NO2, no3, notes, ocean, oceanography, oceans, office, phosphate, po4, preliminary, salinity, science, sea, Sea_ice_depth, seawater, sheet, sheet_name, SiO4, temperature, time, uaf, UAF_Mass_Balance_Temperature, water";
String keywords_vocabulary "GCMD Science Keywords";
String license "https://www.bco-dmo.org/dataset/816755/license";
String metadata_source "https://www.bco-dmo.org/api/dataset/816755";
Float64 Northernmost_Northing 71.473;
String param_mapping "{'816755': {'lat': 'flag - latitude', 'lon': 'flag - longitude'}}";
String parameter_source "https://www.bco-dmo.org/mapserver/dataset/816755/parameters";
String people_0_affiliation "University of Washington";
String people_0_affiliation_acronym "UW";
String people_0_person_name "Jody W. Deming";
String people_0_person_nid "789282";
String people_0_role "Principal Investigator";
String people_0_role_type "originator";
String people_1_affiliation "University of Alaska Fairbanks";
String people_1_affiliation_acronym "UAF";
String people_1_person_name "Hajo Eicken";
String people_1_person_nid "789283";
String people_1_role "Co-Principal Investigator";
String people_1_role_type "originator";
String people_2_affiliation "University of Alaska Fairbanks";
String people_2_affiliation_acronym "UAF";
String people_2_person_name "Go Iwahana";
String people_2_person_nid "789284";
String people_2_role "Co-Principal Investigator";
String people_2_role_type "originator";
String project "Arctic Subzero Brines";
String projects_0_acronym "Arctic Subzero Brines";
String projects_0_description
"GBMF Summary:
In support of developing a virus–bacterium–alga culture system and advancing methods to investigate how virus infection and stress impact gene flow and microbial evolution in cold, highly saline environments.";
String projects_0_end_date "2020-04";
String projects_0_name "Understanding How Virus Infection Affects Gene Flow and Microbial Evolution in Extreme Polar Environments";
String projects_0_project_nid "789280";
String projects_0_start_date "2016-10";
String publisher_name "Biological and Chemical Oceanographic Data Management Office (BCO-DMO)";
String publisher_type "institution";
String sourceUrl "(local files)";
Float64 Southernmost_Northing 71.3729;
String standard_name_vocabulary "CF Standard Name Table v55";
String summary "Sea ice cores were collected at 71.2944\\u02daN, 156.7153\\u02daW and 71.3729\\u02daN, 156.5073\\u02daW in May 2017 and at 71.4730\\u02daN, 156.7294\\u02daW in May 2018. Sea ice cores were drilled with a MARK II ice auger (Kovacs Enterprise). The cores were sectioned immediately after collection with a clean rust-proof, custom alloy bow saw in the field in 5 cm sections and each was collected in sterile Whirlpak\\u00ae bags. Core sections were melted at room temperature before volumes were allocated for nutrient, water isotope, and bulk salinity measurements. Analytical measurements were made upon sample return to the University of Washington and to the University of Alaska Fairbanks. Associated temperature profile data were acquired from the nearby UAF Sea Ice Mass Balance site.";
String title "[Geneflow Profile] - Temperature, salinity, water isotope, and inorganic nutrient profiles of sea ice core sections collected offshore near Utqiaġvik, Alaska, USA in May 2017 and 2018. (Understanding How Virus Infection Affects Gene Flow and Microbial Evolution in Extreme Polar Environments)";
String version "1";
Float64 Westernmost_Easting -156.7294;
String xml_source "osprey2erddap.update_xml() v1.5";
}
}
Data Access Protocol (DAP) and its
selection constraints.
The URL specifies what you want: the dataset, a description of the graph or the subset of the data, and the file type for the response.
Tabledap request URLs must be in the form
https://coastwatch.pfeg.noaa.gov/erddap/tabledap/datasetID.fileType{?query}
For example,
https://coastwatch.pfeg.noaa.gov/erddap/tabledap/pmelTaoDySst.htmlTable?longitude,latitude,time,station,wmo_platform_code,T_25&time>=2015-05-23T12:00:00Z&time<=2015-05-31T12:00:00Z
Thus, the query is often a comma-separated list of desired variable names,
followed by a collection of
constraints (e.g., variable<value),
each preceded by '&' (which is interpreted as "AND").
For details, see the tabledap Documentation.