Data Access Form

Dataset Title:	[Effects of protists on HBx predation] - Population changes in Halobacteriovorax cultured with protist & prey (Excellence in Research: Assessing the Control by Multiple Micropredators on Bacterial Communities in Estuarine Environments and Characterization of Prey Lysis Products Resulting from Each Predator)
Institution:	BCO-DMO (Dataset ID: bcodmo_dataset_880924_v1)
Information:	Summary \| License \| Metadata \| Background \| Files \| Make a graph

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Variable	Minimum	Maximum
Treatment (unitless)	"'Auto SW + V.p.'"	"'Sw Fil. 5 + V.p.'"
Time (hours)	0	120
Optical_Density (OD units)	0.033	0.195
Protists (counts per ml)	158.0	42592.0
Vibrio (gene copies per reaction)	0.1	57660.4
Halobacteriovorax (gene copies per reaction)	0.0	1.227734E7

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The Dataset Attribute Structure (.das) for this Dataset

Attributes {
 s {
  Treatment {
    String long_name "Treatment";
    String units "unitless";
  }
  Time {
    Int32 actual_range 0, 120;
    String long_name "Time";
    String units "hours";
  }
  Optical_Density {
    Float32 actual_range 0.033, 0.195;
    String long_name "Optical_density";
    String units "OD units";
  }
  Protists {
    Float32 actual_range 158.0, 42592.0;
    String long_name "Protists";
    String units "counts per ml";
  }
  Vibrio {
    Float32 actual_range 0.1, 57660.4;
    String long_name "Vibrio";
    String units "gene copies per reaction";
  }
  Halobacteriovorax {
    Float32 actual_range 0.0, 1.227734e+7;
    String long_name "Halobacteriovorax";
    String units "gene copies per reaction";
  }
 }
  NC_GLOBAL {
    String cdm_data_type "Other";
    String Conventions "COARDS, CF-1.6, ACDD-1.3";
    String creator_email "info@bco-dmo.org";
    String creator_name "BCO-DMO";
    String creator_url "https://www.bco-dmo.org/";
    String doi "10.26008/1912/bco-dmo.880924.1";
    String history 
"2024-11-08T05:59:51Z (local files)
2024-11-08T05:59:51Z https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_880924_v1.html";
    String infoUrl "https://www.bco-dmo.org/dataset/880924";
    String institution "BCO-DMO";
    String license 
"The data may be used and redistributed for free but is not intended
for legal use, since it may contain inaccuracies. Neither the data
Contributor, ERD, NOAA, nor the United States Government, nor any
of their employees or contractors, makes any warranty, express or
implied, including warranties of merchantability and fitness for a
particular purpose, or assumes any legal liability for the accuracy,
completeness, or usefulness, of this information.";
    String sourceUrl "(local files)";
    String summary "Here, we investigate the growth trajectory and predation dynamics of protists, and HBx micro-predators in co-culture with a common prey, V. parahaemolyticus, in a time-series study in marine water microcosms. The microcosms were established with water samples collected from the Apalachicola Bay in northwest Florida, USA and amended with a suspension of prey bacteria. Samples were taken at a high temporal resolution (3-hour intervals for 5 days) to capture detailed measurements and changes in the growth responses of HBx and protists, using both culture- and molecular-based methods. The protists were counted by qPCR and flow cytometry. The HBx were counted by qPCR and a culture plating method";
    String title "[Effects of protists on HBx predation] - Population changes in Halobacteriovorax cultured with protist & prey (Excellence in Research: Assessing the Control by Multiple Micropredators on Bacterial Communities in Estuarine Environments and Characterization of Prey Lysis Products Resulting from Each Predator)";
  }
}

Using tabledap to Request Data and Graphs from Tabular Datasets

tabledap lets you request a data subset, a graph, or a map from a tabular dataset (for example, buoy data), via a specially formed URL. tabledap uses the OPeNDAP (external link)

Data Access Protocol (DAP) (external link)

and its selection constraints (external link)

The URL specifies what you want: the dataset, a description of the graph or the subset of the data, and the file type for the response.

(easy) You can get data by using the dataset's Data Access Form or Subset form. They make the URL for you.
(easy) You can make a graph or map by using the dataset's Make A Graph form. It makes the URL for you.
(not hard) You can bypass the forms and get the data or make a graph or map by generating the URL by hand or with a computer program or script.

Tabledap request URLs must be in the form
https://coastwatch.pfeg.noaa.gov/erddap/tabledap/datasetID.fileType{?query}
For example,
https://coastwatch.pfeg.noaa.gov/erddap/tabledap/pmelTaoDySst.htmlTable?longitude,latitude,time,station,wmo_platform_code,T_25&time>=2015-05-23T12:00:00Z&time<=2015-05-31T12:00:00Z
Thus, the query is often a comma-separated list of desired variable names, followed by a collection of constraints (e.g., variable<value), each preceded by '&' (which is interpreted as "AND").

For details, see the tabledap Documentation.