Accessing BCO-DMO data
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BCO-DMO ERDDAP
Accessing BCO-DMO data |
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| Dataset Title: | [Shoots sampled for whole genome sequencing] - Shoot measurements (sheath length and width) for the eelgrass (Zostera marina) shoots sampled for whole genome sequencing collected from Bodega and Tomales Bay, CA, USA from July to September 2019 (Using genomics to link traits to ecosystem function in the eelgrass Zostera marina) 
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| Institution: | BCO-DMO (Dataset ID: bcodmo_dataset_924808_v1) |
| Information: | Summary
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Attributes {
s {
INDV {
String long_name "Indv";
String units "unitless";
}
SITE {
String long_name "Site";
String units "unitless";
}
collection_date {
String long_name "Collection_date";
String units "unitless";
}
Latitude {
Float32 actual_range 38.10505, 38.33343;
String long_name "Latitude";
String units "degrees_north";
}
longitude {
String _CoordinateAxisType "Lon";
Float32 actual_range -123.0595, -122.8464;
String axis "X";
String ioos_category "Location";
String long_name "Longitude";
String standard_name "longitude";
String units "degrees_east";
}
sheath_length {
Int32 actual_range 66, 395;
String long_name "Sheath_length";
String units "millimeters (mm)";
}
sheath_width {
Float32 actual_range 5.0, 12.0;
String long_name "Sheath_width";
String units "millimeters (mm)";
}
site_descrip {
String long_name "Depth";
String units "unitless";
}
mean_temp_C {
Float32 actual_range 16.1, 22.2;
String long_name "Mean_temp_c";
String units "degrees Celsius";
}
}
NC_GLOBAL {
String cdm_data_type "Other";
String Conventions "COARDS, CF-1.6, ACDD-1.3";
String creator_email "info@bco-dmo.org";
String creator_name "BCO-DMO";
String creator_url "https://www.bco-dmo.org/";
String doi "10.26008/1912/bco-dmo.924808.1";
Float64 Easternmost_Easting -122.8464;
Float64 geospatial_lon_max -122.8464;
Float64 geospatial_lon_min -123.0595;
String geospatial_lon_units "degrees_east";
String history
"2024-12-26T00:28:39Z (local files)
2024-12-26T00:28:39Z https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_924808_v1.html";
String infoUrl "https://www.bco-dmo.org/dataset/924808";
String institution "BCO-DMO";
String license
"The data may be used and redistributed for free but is not intended
for legal use, since it may contain inaccuracies. Neither the data
Contributor, ERD, NOAA, nor the United States Government, nor any
of their employees or contractors, makes any warranty, express or
implied, including warranties of merchantability and fitness for a
particular purpose, or assumes any legal liability for the accuracy,
completeness, or usefulness, of this information.";
String sourceUrl "(local files)";
String summary "This dataset provides shoot measurements for the shoots sampled for whole genome sequencing for Tomales Bay and Bodega Harbor (see related datasets for access to sequence data). Sheath width is measured on the terminal shoot using calipers at the abscission point (point where leaves emerge from the sheath). Sheath length is measured using a ruler to the nearest mm from the base to the abscission point. These data were used to record any differences in plant phenotype among the populations sampled. Shoot Length was not measured since it is susceptible to breakage and density was not measured as we could not ascribe density to a genetic individual.";
String title "[Shoots sampled for whole genome sequencing] - Shoot measurements (sheath length and width) for the eelgrass (Zostera marina) shoots sampled for whole genome sequencing collected from Bodega and Tomales Bay, CA, USA from July to September 2019 (Using genomics to link traits to ecosystem function in the eelgrass Zostera marina)";
Float64 Westernmost_Easting -123.0595;
}
}
Data Access Protocol (DAP) and its
selection constraints.
The URL specifies what you want: the dataset, a description of the graph or the subset of the data, and the file type for the response.
Tabledap request URLs must be in the form
https://coastwatch.pfeg.noaa.gov/erddap/tabledap/datasetID.fileType{?query}
For example,
https://coastwatch.pfeg.noaa.gov/erddap/tabledap/pmelTaoDySst.htmlTable?longitude,latitude,time,station,wmo_platform_code,T_25&time>=2015-05-23T12:00:00Z&time<=2015-05-31T12:00:00Z
Thus, the query is often a comma-separated list of desired variable names,
followed by a collection of
constraints (e.g., variable<value),
each preceded by '&' (which is interpreted as "AND").
For details, see the tabledap Documentation.