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Dataset Title:	[Incubation data for Mytilus californianus calcification] - Incubation data for Mytilus californianus calcification from January to April 2022 (OA decoupling project) (Invertebrate calcification and behavior in seawater of decoupled carbonate chemistry)
Institution:	BCO-DMO   (Dataset ID: bcodmo_dataset_925598_v1)
Information:	Summary | License | Metadata | Background | Data Access Form | Files

 

Graph Type:  lines linesAndMarkers markers X Axis:  AphiaID duration salinity temperature calcification tissue_mass shell_mass wet_mass TA ph_total hco3 co3 omega omegac ca ph_free H SIR co2 pco2 dic do ci incubation_water_mass byssal_threads delta_ta delta_nh3 calc_diss figure2 figure3 figure4 figureS45 Y Axis:  AphiaID duration salinity temperature calcification tissue_mass shell_mass wet_mass TA ph_total hco3 co3 omega omegac ca ph_free H SIR co2 pco2 dic do ci incubation_water_mass byssal_threads delta_ta delta_nh3 calc_diss figure2 figure3 figure4 figureS45 Color:  AphiaID duration salinity temperature calcification tissue_mass shell_mass wet_mass TA ph_total hco3 co3 omega omegac ca ph_free H SIR co2 pco2 dic do ci incubation_water_mass byssal_threads delta_ta delta_nh3 calc_diss figure2 figure3 figure4 figureS45   Constraints Optional Constraint #1 Optional Constraint #2 species AphiaID LSID module date_local start_datetime_local ISO_Start_DateTime_UTC duration salinity temperature calcification tissue_mass shell_mass wet_mass TA ph_total hco3 co3 omega omegac ca ph_free H SIR co2 pco2 dic do ci incubation_water_mass byssal_threads delta_ta delta_nh3 calc_diss figure2 figure3 figure4 figureS45     != =~ <= >= = < >     != =~ <= >= = < > species AphiaID LSID module date_local start_datetime_local ISO_Start_DateTime_UTC duration salinity temperature calcification tissue_mass shell_mass wet_mass TA ph_total hco3 co3 omega omegac ca ph_free H SIR co2 pco2 dic do ci incubation_water_mass byssal_threads delta_ta delta_nh3 calc_diss figure2 figure3 figure4 figureS45     != =~ <= >= = < >     != =~ <= >= = < > species AphiaID LSID module date_local start_datetime_local ISO_Start_DateTime_UTC duration salinity temperature calcification tissue_mass shell_mass wet_mass TA ph_total hco3 co3 omega omegac ca ph_free H SIR co2 pco2 dic do ci incubation_water_mass byssal_threads delta_ta delta_nh3 calc_diss figure2 figure3 figure4 figureS45     != =~ <= >= = < >     != =~ <= >= = < > species AphiaID LSID module date_local start_datetime_local ISO_Start_DateTime_UTC duration salinity temperature calcification tissue_mass shell_mass wet_mass TA ph_total hco3 co3 omega omegac ca ph_free H SIR co2 pco2 dic do ci incubation_water_mass byssal_threads delta_ta delta_nh3 calc_diss figure2 figure3 figure4 figureS45     != =~ <= >= = < >     != =~ <= >= = < > species AphiaID LSID module date_local start_datetime_local ISO_Start_DateTime_UTC duration salinity temperature calcification tissue_mass shell_mass wet_mass TA ph_total hco3 co3 omega omegac ca ph_free H SIR co2 pco2 dic do ci incubation_water_mass byssal_threads delta_ta delta_nh3 calc_diss figure2 figure3 figure4 figureS45     != =~ <= >= = < >     != =~ <= >= = < >   Server-side Functions  distinct() orderBy orderByDescending orderByClosest orderByCount orderByLimit orderByMax orderByMin orderByMinMax orderByMean orderBySum (" species AphiaID LSID module date_local start_datetime_local ISO_Start_DateTime_UTC duration salinity temperature calcification tissue_mass shell_mass wet_mass TA ph_total hco3 co3 omega omegac ca ph_free H SIR co2 pco2 dic do ci incubation_water_mass byssal_threads delta_ta delta_nh3 calc_diss figure2 figure3 figure4 figureS45 species AphiaID LSID module date_local start_datetime_local ISO_Start_DateTime_UTC duration salinity temperature calcification tissue_mass shell_mass wet_mass TA ph_total hco3 co3 omega omegac ca ph_free H SIR co2 pco2 dic do ci incubation_water_mass byssal_threads delta_ta delta_nh3 calc_diss figure2 figure3 figure4 figureS45 species AphiaID LSID module date_local start_datetime_local ISO_Start_DateTime_UTC duration salinity temperature calcification tissue_mass shell_mass wet_mass TA ph_total hco3 co3 omega omegac ca ph_free H SIR co2 pco2 dic do ci incubation_water_mass byssal_threads delta_ta delta_nh3 calc_diss figure2 figure3 figure4 figureS45 species AphiaID LSID module date_local start_datetime_local ISO_Start_DateTime_UTC duration salinity temperature calcification tissue_mass shell_mass wet_mass TA ph_total hco3 co3 omega omegac ca ph_free H SIR co2 pco2 dic do ci incubation_water_mass byssal_threads delta_ta delta_nh3 calc_diss figure2 figure3 figure4 figureS45 ")   Graph Settings Marker Type:  None Plus X Dot Square Filled Square Circle Filled Circle Up Triangle Filled Up Triangle Borderless Filled Square Borderless Filled Circle Borderless Filled Up Triangle  Size:  3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 Color:  Color Bar:  BlackBlueWhite BlackGreenWhite BlackRedWhite BlackWhite BlueWhiteRed BlueWideWhiteRed LightRainbow Ocean OceanDepth Rainbow Rainbow2 Rainfall ReverseRainbow RedWhiteBlue RedWhiteBlue2 RedWideWhiteBlue Spectrum Topography TopographyDepth WhiteBlueBlack WhiteGreenBlack WhiteRedBlack WhiteBlack YellowRed KT_algae KT_amp KT_balance KT_curl KT_deep KT_delta KT_dense KT_gray KT_haline KT_ice KT_matter KT_oxy KT_phase KT_solar KT_speed KT_tempo KT_thermal KT_turbid  Continuity:  Continuous Discrete  Scale:  Linear Log    Minimum:   Maximum:   N Sections:  2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 Y Axis Minimum:   Maximum:    Ascending Descending Linear Log   Redraw the Graph (Please be patient. It may take a while to get the data.)   Optional: Then set the File Type: .asc .csv .csvp .csv0 .dataTable .das .dds .dods .esriCsv .fgdc .geoJson .graph .help .html .htmlTable .iso19115 .itx .json .jsonlCSV1 .jsonlCSV .jsonlKVP .mat .nc .ncHeader .ncCF .ncCFHeader .ncCFMA .ncCFMAHeader .nccsv .nccsvMetadata .ncoJson .odvTxt .subset .tsv .tsvp .tsv0 .wav .xhtml .kml .smallPdf .pdf .largePdf .smallPng .png .largePng .transparentPng (File Type information) and or view the URL: (Documentation / Bypass this form )

 

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Things You Can Do With Your Graphs

Well, you can do anything you want with your graphs, of course. But some things you might not have considered are:

• Web page authors can embed a graph of the latest data in a web page using HTML <img> tags.
• Anyone can use ERDDAPs Slide Sorter to build a personal web page that displays graphs with the latest data (or other images or HTML content), each in its own, draggable slide.
   

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The Dataset Attribute Structure (.das) for this Dataset

Attributes {
 s {
  species {
    String long_name "Species";
    String units "unitless";
  }
  AphiaID {
    Int32 actual_range 367837, 367837;
    String long_name "Aphiaid";
    String units "unitless";
  }
  LSID {
    String long_name "Lsid";
    String units "unitless";
  }
  module {
    String long_name "Module";
    String units "unitless";
  }
  date_local {
    String long_name "Date_local";
    String units "unitless";
  }
  start_datetime_local {
    String long_name "Start_datetime_local";
    String units "unitless";
  }
  ISO_Start_DateTime_UTC {
    String long_name "Iso_start_datetime_utc";
    String units "unitless";
  }
  duration {
    Float32 actual_range 1.12, 3.03;
    String long_name "Duration";
    String units "hours";
  }
  salinity {
    Float32 actual_range 24.83, 35.54;
    String long_name "Salinity";
    String units "PSU";
  }
  temperature {
    Float32 actual_range 11.25, 14.0;
    String long_name "Temperature";
    String units "degrees Celcius (c)";
  }
  calcification {
    Float32 actual_range -9.54, 18.16;
    String long_name "Calcification";
    String units "umol hr^-1 g^-0.71592";
  }
  tissue_mass {
    Float32 actual_range 0.23, 3.21;
    String long_name "Tissue_mass";
    String units "grams (g)";
  }
  shell_mass {
    Float32 actual_range 2.2, 33.08;
    String long_name "Shell_mass";
    String units "grams (g)";
  }
  wet_mass {
    Float32 actual_range 4.33, 58.59;
    String long_name "Wet_mass";
    String units "grams (g)";
  }
  TA {
    Float32 actual_range 337.15, 9583.02;
    String long_name "Ta";
    String units "umol kg-1";
  }
  ph_total {
    Float32 actual_range 6.632, 8.842;
    String long_name "Ph_total";
    String units "unitless";
  }
  hco3 {
    Float32 actual_range 282.59, 8832.98;
    String long_name "Hco3";
    String units "umol kg-1";
  }
  co3 {
    Float32 actual_range 1.26, 663.51;
    String long_name "Co3";
    String units "umol kg-1";
  }
  omega {
    Float32 actual_range 0.02, 11.88;
    String long_name "Omega";
    String units "unitless";
  }
  omegac {
    Float32 actual_range 0.03, 18.66;
    String long_name "Omegac";
    String units "unitless";
  }
  ca {
    Float32 actual_range 0.01, 0.05;
    String long_name "Ca";
    String units "mol kg-1";
  }
  ph_free {
    Float32 actual_range 6.713, 8.924;
    String long_name "Ph_free";
    String units "unitless";
  }
  H {
    Float32 actual_range 0.0, 0.19;
    String long_name "H";
    String units "unitless";
  }
  SIR {
    Float32 actual_range 0.0, 1.17;
    String long_name "Sir";
    String units "unitless";
  }
  co2 {
    Float32 actual_range 1.08, 535.76;
    String long_name "Co2";
    String units "umol kg-1";
  }
  pco2 {
    Float32 actual_range 26.48, 13465.64;
    String long_name "Pco2";
    String units "uatm";
  }
  dic {
    Float32 actual_range 0.0, 0.01;
    String long_name "Dic";
    String units "umol kg-1";
  }
  do {
    Float32 actual_range 238.75, 284.25;
    String long_name "Do";
    String units "umol kg-1";
  }
  ci {
    Float32 actual_range 0.05, 0.18;
    String long_name "Ci";
    String units "umol kg-1";
  }
  incubation_water_mass {
    Float32 actual_range 0.76, 0.9;
    String long_name "Incubation_water_mass";
    String units "kilograms (kg)";
  }
  byssal_threads {
    Float32 actual_range 0.0, 5.81;
    String long_name "Byssal_threads";
    String units "threads hr-1";
  }
  delta_ta {
    Float32 actual_range -68.68, 57.06;
    String long_name "Delta_ta";
    String units "umol kg-1";
  }
  delta_nh3 {
    Float32 actual_range -1.96, 47.5;
    String long_name "Delta_nh3";
    String units "umol kg-1";
  }
  calc_diss {
    Float32 actual_range -3.59, 0.25;
    String long_name "Calc_diss";
    String units "umol";
  }
  figure2 {
    Float32 actual_range 0.0, 1.0;
    String long_name "Figure2";
    String units "unitless";
  }
  figure3 {
    Float32 actual_range 0.0, 1.0;
    String long_name "Figure3";
    String units "unitless";
  }
  figure4 {
    Float32 actual_range 1.0, 1.0;
    String long_name "Figure4";
    String units "unitless";
  }
  figureS45 {
    Float32 actual_range 0.0, 1.0;
    String long_name "Figures45";
    String units "unitless";
  }
 }
  NC_GLOBAL {
    String cdm_data_type "Other";
    String Conventions "COARDS, CF-1.6, ACDD-1.3";
    String creator_email "info@bco-dmo.org";
    String creator_name "BCO-DMO";
    String creator_url "https://www.bco-dmo.org/";
    String doi "10.26008/1912/bco-dmo.925598.1";
    String history 
"2024-11-08T06:05:55Z (local files)
2024-11-08T06:05:55Z https://erddap.bco-dmo.org/tabledap/bcodmo_dataset_925598_v1.das";
    String infoUrl "https://www.bco-dmo.org/dataset/925598";
    String institution "BCO-DMO";
    String license 
"The data may be used and redistributed for free but is not intended
for legal use, since it may contain inaccuracies. Neither the data
Contributor, ERD, NOAA, nor the United States Government, nor any
of their employees or contractors, makes any warranty, express or
implied, including warranties of merchantability and fitness for a
particular purpose, or assumes any legal liability for the accuracy,
completeness, or usefulness, of this information.";
    String sourceUrl "(local files)";
    String summary 
"Calcification is vital to marine organisms that produce calcium carbonate shells and skeletons. However, how calcification is impacted by ongoing environmental changes, including ocean acidification, remains incompletely understood due to complex relationships among the carbonate system variables hypothesized to drive calcification. 

Here, we experimentally decouple these drivers in an exploration of shell formation in adult marine mussels, Mytilus californianus. In contrast to models that focus on single parameters like calcium carbonate saturation state, our results implicate two independent factors, bicarbonate concentration and seawater pH, in governing calcification. While qualitatively similar to ideas embodied in the related substrate-inhibitor ratio (bicarbonate divided by hydrogen ion concentration), our data highlight that merging bicarbonate ion and hydrogen ion concentrations into a simple quotient obscures important features of calcification. Considering a dual-parameter framework improves mechanistic understanding of how calcifiers interact with complex and changing chemical conditions.";
    String title "[Incubation data for Mytilus californianus calcification] - Incubation data for Mytilus californianus calcification from January to April 2022 (OA decoupling project) (Invertebrate calcification and behavior in seawater of decoupled carbonate chemistry)";
  }
}

 

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Using tabledap to Request Data and Graphs from Tabular Datasets

tabledap lets you request a data subset, a graph, or a map from a tabular dataset (for example, buoy data), via a specially formed URL. tabledap uses the OPeNDAP Data Access Protocol (DAP) and its selection constraints.

The URL specifies what you want: the dataset, a description of the graph or the subset of the data, and the file type for the response.

• (easy) You can get data by using the dataset's Data Access Form or Subset form. They make the URL for you.
• (easy) You can make a graph or map by using the dataset's Make A Graph form. It makes the URL for you.
• (not hard) You can bypass the forms and get the data or make a graph or map by generating the URL by hand or with a computer program or script.

Tabledap request URLs must be in the form
https://coastwatch.pfeg.noaa.gov/erddap/tabledap/datasetID.fileType{?query}
For example,
https://coastwatch.pfeg.noaa.gov/erddap/tabledap/pmelTaoDySst.htmlTable?longitude,latitude,time,station,wmo_platform_code,T_25&time>=2015-05-23T12:00:00Z&time<=2015-05-31T12:00:00Z
Thus, the query is often a comma-separated list of desired variable names, followed by a collection of constraints (e.g., variable<value), each preceded by '&' (which is interpreted as "AND").

For details, see the tabledap Documentation.

 

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