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Dataset Title:  [Zooplankton Acidification Lab Results] - Results from Calanus pacificus
Acidification Laboratory Experiments from 2019-2020 (Zooplankton Swimming
project) (Causes and consequences of hypoxia and pH impacts on zooplankton:
Linking movement behavior to vertical distribution.)
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Institution:  BCO-DMO   (Dataset ID: bcodmo_dataset_926368_v1)
Information:  Summary ? | License ? | Metadata | Background (external link) | Files | Make a graph
 
Variable ?   Optional
Constraint #1 ?
Optional
Constraint #2 ?
   Minimum ?
 
   Maximum ?
 
 Experiment_Date (unitless) ?          "2020-01-09"    "2020-01-10"
 Collection_Date (unitless) ?          "2020-01-09"    "2020-01-10"
 Sort_Date (unitless) ?          "2020-01-09"    "2020-01-10"
 Collector (unitless) ?          "Amanda on WOAC"    "Julie Keister"
 Collection_Site (unitless) ?          "Main Basin"    "South Sound"
 Lifestage (unitless) ?          "adult"    "adult"
 Sex (unitless) ?          "females"    "females"
 Collection_Lat (degrees_north) ?          47.27327    48.02363
 longitude (Collection_long, degrees_east) ?          -123.1077    -122.3137
  < slider >
 Experiment_Type (unitless) ?          "pH"    "pH"
 Collection_Notes (unitless) ?          "340' deep, net to ..."    "7:00am, 110m tow, ..."
 Experiment_Notes (unitless) ?          ""    ""
 
Server-side Functions ?
 distinct() ?
? ("Hover here to see a list of options. Click on an option to select it.Hover here to see a list of options. Click on an option to select it.Hover here to see a list of options. Click on an option to select it.Hover here to see a list of options. Click on an option to select it.Hover here to see a list of options. Click on an option to select it.")

File type: (more information)

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The Dataset Attribute Structure (.das) for this Dataset

Attributes {
 s {
  Experiment_Date {
    String long_name "Experiment_date";
    String units "unitless";
  }
  Collection_Date {
    String long_name "Collection_date";
    String units "unitless";
  }
  Sort_Date {
    String long_name "Sort_date";
    String units "unitless";
  }
  Collector {
    String long_name "Collector";
    String units "unitless";
  }
  Collection_Site {
    String long_name "Collection_site";
    String units "unitless";
  }
  Lifestage {
    String long_name "Lifestage";
    String units "unitless";
  }
  Sex {
    String long_name "Sex";
    String units "unitless";
  }
  Collection_Lat {
    Float32 actual_range 47.27327, 48.02363;
    String long_name "Collection_lat";
    String units "degrees_north";
  }
  longitude {
    String _CoordinateAxisType "Lon";
    Float32 actual_range -123.1077, -122.3137;
    String axis "X";
    String ioos_category "Location";
    String long_name "Collection_long";
    String standard_name "longitude";
    String units "degrees_east";
  }
  Experiment_Type {
    String long_name "Experiment_type";
    String units "unitless";
  }
  Collection_Notes {
    String long_name "Collection_notes";
    String units "unitless";
  }
  Experiment_Notes {
    String long_name "Experiment_notes";
    String units "unitless";
  }
 }
  NC_GLOBAL {
    String cdm_data_type "Other";
    String Conventions "COARDS, CF-1.6, ACDD-1.3";
    String creator_email "info@bco-dmo.org";
    String creator_name "BCO-DMO";
    String creator_url "https://www.bco-dmo.org/";
    String doi "10.26008/1912/bco-dmo.926368.1";
    Float64 Easternmost_Easting -122.3137;
    Float64 geospatial_lon_max -122.3137;
    Float64 geospatial_lon_min -123.1077;
    String geospatial_lon_units "degrees_east";
    String history 
"2024-11-13T22:06:31Z (local files)
2024-11-13T22:06:31Z https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_926368_v1.html";
    String infoUrl "https://www.bco-dmo.org/dataset/926368";
    String institution "BCO-DMO";
    String license 
"The data may be used and redistributed for free but is not intended
for legal use, since it may contain inaccuracies. Neither the data
Contributor, ERD, NOAA, nor the United States Government, nor any
of their employees or contractors, makes any warranty, express or
implied, including warranties of merchantability and fitness for a
particular purpose, or assumes any legal liability for the accuracy,
completeness, or usefulness, of this information.";
    String sourceUrl "(local files)";
    String summary 
"We conducted laboratory experiments using stratified 1 m x 0.1 × 0.1 acrylic water columns to measure the effects of bottom water hypoxia and low pH on mortality, distribution, and swimming behaviors of the calanoid copepod Calanus pacificus. Calanus pacificus were collected from within Puget Sound, Washington, USA, between June and October of 2019 and 2020.  Their behaviors and vertical distributions in response to either hypoxic or acidified bottom waters were observed in an array of 4 replicate columns. Swimming behavior was observed for 90 minutes using 5-megapixel IR USB cameras. Two front-facing cameras (‘bottom camera', ‘surface camera') recorded swimming in the X (left, right) and Z (up, down) directions. An upwards-facing ‘base camera' was added to each tank in 2020 to improve tracking and behavioral analysis of copepods near the bottom. Base cameras recorded the bottom 2 cm of each tank in the X and Y (front, back) directions. 

The primary data file of this dataset contains collection and organism details for copepods used in acidification experiments (926368_v1_zooplankton_acidification_pH_experiment_overview.csv). This dataset also includes four Supplemental Files .csv files summarizing results from our acidification experiments (926368_v1_zooplankton_acidification_pH_chemistry.csv, 926368_v1_zooplankton_acidification_pH_moribundity.csv, 926368_v1_zooplankton_acidification_pH_mean_height.csv, 926368_v1_zooplankton_acidification_pH_speed.csv).";
    String title "[Zooplankton Acidification Lab Results] - Results from Calanus pacificus Acidification Laboratory Experiments from 2019-2020 (Zooplankton Swimming project) (Causes and consequences of hypoxia and pH impacts on zooplankton: Linking movement behavior  to vertical distribution.)";
    Float64 Westernmost_Easting -123.1077;
  }
}

 

Using tabledap to Request Data and Graphs from Tabular Datasets

tabledap lets you request a data subset, a graph, or a map from a tabular dataset (for example, buoy data), via a specially formed URL. tabledap uses the OPeNDAP (external link) Data Access Protocol (DAP) (external link) and its selection constraints (external link).

The URL specifies what you want: the dataset, a description of the graph or the subset of the data, and the file type for the response.

Tabledap request URLs must be in the form
https://coastwatch.pfeg.noaa.gov/erddap/tabledap/datasetID.fileType{?query}
For example,
https://coastwatch.pfeg.noaa.gov/erddap/tabledap/pmelTaoDySst.htmlTable?longitude,latitude,time,station,wmo_platform_code,T_25&time>=2015-05-23T12:00:00Z&time<=2015-05-31T12:00:00Z
Thus, the query is often a comma-separated list of desired variable names, followed by a collection of constraints (e.g., variable<value), each preceded by '&' (which is interpreted as "AND").

For details, see the tabledap Documentation.


 
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