ERDDAP > tabledap > Make A Graph

Dataset Title:	[Short-term heat stress assay Heron Island - physiological data] - Photochemical yield and color score data from short-term heat stress assays performed with with corals collected from sites around Heron Island, southern Great Barrier Reef in Sept and Oct of 2022 (Influence of environmental pH variability and thermal sensitivity on the resilience of reef-building corals to acidification stress)
Institution:	BCO-DMO   (Dataset ID: bcodmo_dataset_926887_v1)
Range:	longitude = 151.9295 to 151.9802°E, latitude = -23.45972 to -23.4395°N
Information:	Summary | License | FGDC | ISO 19115 | Metadata | Background | Data Access Form | Files

 

Graph Type:  lines linesAndMarkers markers sticks vectors X Axis:  latitude longitude Replicate Temperature F0 Fm Y Area1 Mean_frag StdDev1 Mode1 MinThr1 MaxThr1 Y Axis:  latitude longitude Replicate Temperature F0 Fm Y Area1 Mean_frag StdDev1 Mode1 MinThr1 MaxThr1 Color:  latitude longitude Replicate Temperature F0 Fm Y Area1 Mean_frag StdDev1 Mode1 MinThr1 MaxThr1   Constraints Optional Constraint #1 Optional Constraint #2 Site_Code Site_Name latitude longitude Genus ColonyID Treatment_nonnum Treatment Replicate Temperature F0 Fm Y Label Color_type Color Name Area1 Mean_frag StdDev1 Mode1 MinThr1 MaxThr1 Label_match     != =~ <= >= = < >     != =~ <= >= = < > Site_Code Site_Name latitude longitude Genus ColonyID Treatment_nonnum Treatment Replicate Temperature F0 Fm Y Label Color_type Color Name Area1 Mean_frag StdDev1 Mode1 MinThr1 MaxThr1 Label_match     != =~ <= >= = < >     != =~ <= >= = < > Site_Code Site_Name latitude longitude Genus ColonyID Treatment_nonnum Treatment Replicate Temperature F0 Fm Y Label Color_type Color Name Area1 Mean_frag StdDev1 Mode1 MinThr1 MaxThr1 Label_match     != =~ <= >= = < >     != =~ <= >= = < > Site_Code Site_Name latitude longitude Genus ColonyID Treatment_nonnum Treatment Replicate Temperature F0 Fm Y Label Color_type Color Name Area1 Mean_frag StdDev1 Mode1 MinThr1 MaxThr1 Label_match     != =~ <= >= = < >     != =~ <= >= = < > Site_Code Site_Name latitude longitude Genus ColonyID Treatment_nonnum Treatment Replicate Temperature F0 Fm Y Label Color_type Color Name Area1 Mean_frag StdDev1 Mode1 MinThr1 MaxThr1 Label_match     != =~ <= >= = < >     != =~ <= >= = < >   Server-side Functions  distinct() orderBy orderByDescending orderByClosest orderByCount orderByLimit orderByMax orderByMin orderByMinMax orderByMean orderBySum (" Site_Code Site_Name latitude longitude Genus ColonyID Treatment_nonnum Treatment Replicate Temperature F0 Fm Y Label Color_type Color Name Area1 Mean_frag StdDev1 Mode1 MinThr1 MaxThr1 Label_match Site_Code Site_Name latitude longitude Genus ColonyID Treatment_nonnum Treatment Replicate Temperature F0 Fm Y Label Color_type Color Name Area1 Mean_frag StdDev1 Mode1 MinThr1 MaxThr1 Label_match Site_Code Site_Name latitude longitude Genus ColonyID Treatment_nonnum Treatment Replicate Temperature F0 Fm Y Label Color_type Color Name Area1 Mean_frag StdDev1 Mode1 MinThr1 MaxThr1 Label_match Site_Code Site_Name latitude longitude Genus ColonyID Treatment_nonnum Treatment Replicate Temperature F0 Fm Y Label Color_type Color Name Area1 Mean_frag StdDev1 Mode1 MinThr1 MaxThr1 Label_match ")   Graph Settings Marker Type:  None Plus X Dot Square Filled Square Circle Filled Circle Up Triangle Filled Up Triangle Borderless Filled Square Borderless Filled Circle Borderless Filled Up Triangle  Size:  3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 Color:  Color Bar:  BlackBlueWhite BlackGreenWhite BlackRedWhite BlackWhite BlueWhiteRed BlueWideWhiteRed LightRainbow Ocean OceanDepth Rainbow Rainbow2 Rainfall ReverseRainbow RedWhiteBlue RedWhiteBlue2 RedWideWhiteBlue Spectrum Topography TopographyDepth WhiteBlueBlack WhiteGreenBlack WhiteRedBlack WhiteBlack YellowRed KT_algae KT_amp KT_balance KT_curl KT_deep KT_delta KT_dense KT_gray KT_haline KT_ice KT_matter KT_oxy KT_phase KT_solar KT_speed KT_tempo KT_thermal KT_turbid  Continuity:  Continuous Discrete  Scale:  Linear Log    Minimum:   Maximum:   N Sections:  2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 Draw land mask:  under over outline off Y Axis Minimum:   Maximum:    Ascending Descending Linear Log   Redraw the Graph (Please be patient. It may take a while to get the data.)   Optional: Then set the File Type: .asc .csv .csvp .csv0 .dataTable .das .dds .dods .esriCsv .fgdc .geoJson .graph .help .html .htmlTable .iso19115 .itx .json .jsonlCSV1 .jsonlCSV .jsonlKVP .mat .nc .ncHeader .ncCF .ncCFHeader .ncCFMA .ncCFMAHeader .nccsv .nccsvMetadata .ncoJson .odvTxt .subset .tsv .tsvp .tsv0 .wav .xhtml .kml .smallPdf .pdf .largePdf .smallPng .png .largePng .transparentPng (File Type information) and or view the URL: (Documentation / Bypass this form )

Click on the map to specify a new center point. Zoom:

 

---

Things You Can Do With Your Graphs

Well, you can do anything you want with your graphs, of course. But some things you might not have considered are:

• Web page authors can embed a graph of the latest data in a web page using HTML <img> tags.
• Anyone can use ERDDAPs Slide Sorter to build a personal web page that displays graphs with the latest data (or other images or HTML content), each in its own, draggable slide.
   

---

The Dataset Attribute Structure (.das) for this Dataset

Attributes {
 s {
  Site_Code {
    String long_name "Site_code";
    String units "unitless";
  }
  Site_Name {
    String long_name "Site_name";
    String units "unitless";
  }
  latitude {
    String _CoordinateAxisType "Lat";
    Float32 actual_range -23.45972, -23.4395;
    String axis "Y";
    String ioos_category "Location";
    String long_name "Latitude";
    String standard_name "latitude";
    String units "degrees_north";
  }
  longitude {
    String _CoordinateAxisType "Lon";
    Float32 actual_range 151.9295, 151.9802;
    String axis "X";
    String ioos_category "Location";
    String long_name "Longitude";
    String standard_name "longitude";
    String units "degrees_east";
  }
  Genus {
    String long_name "Genus";
    String units "unitless";
  }
  ColonyID {
    String long_name "Colonyid";
    String units "unitless";
  }
  Treatment_nonnum {
    String long_name "Treatment_nonnum";
    String units "unitless";
  }
  Treatment {
    String long_name "Treatment";
    String units "unitless";
  }
  Replicate {
    Int32 actual_range 1, 3;
    String long_name "Replicate";
    String units "unitless";
  }
  Temperature {
    Float32 actual_range 23.0, 36.3;
    String long_name "Temperature";
    String units "degrees Celsius (degC)";
  }
  F0 {
    Int32 actual_range 8, 1208;
    String long_name "F0";
    String units "unitless";
  }
  Fm {
    Int32 actual_range 21, 1698;
    String long_name "Fm";
    String units "unitless";
  }
  Y {
    Float32 actual_range 0.0, 0.737;
    String long_name "Y";
    String units "unitless";
  }
  Label {
    String long_name "Label";
    String units "unitless";
  }
  Color_type {
    String long_name "Color_type";
    String units "unitless";
  }
  Color {
    String long_name "Color";
    String units "unitless";
  }
  Name {
    String long_name "Name";
    String units "unitless";
  }
  Area1 {
    Int32 actual_range 68058, 2849684;
    String long_name "Area1";
    String units "square pixels";
  }
  Mean_frag {
    Float32 actual_range 24.851, 173.062;
    String long_name "Mean_frag";
    String units "unitless";
  }
  StdDev1 {
    Float32 actual_range 5.547, 32.404;
    String long_name "Stddev1";
    String units "unitless";
  }
  Mode1 {
    Float32 actual_range 17.0, 180.0;
    String long_name "Mode1";
    String units "unitless";
  }
  MinThr1 {
    Float32 actual_range 0.0, 0.0;
    String long_name "Minthr1";
    String units "unitless";
  }
  MaxThr1 {
    Float32 actual_range 255.0, 255.0;
    String long_name "Maxthr1";
    String units "unitless";
  }
  Label_match {
    String long_name "Label_match";
    String units "unitless";
  }
 }
  NC_GLOBAL {
    String cdm_data_type "Other";
    String Conventions "COARDS, CF-1.6, ACDD-1.3";
    String creator_email "info@bco-dmo.org";
    String creator_name "BCO-DMO";
    String creator_url "https://www.bco-dmo.org/";
    String doi "10.26008/1912/bco-dmo.926887.1";
    Float64 Easternmost_Easting 151.9802;
    Float64 geospatial_lat_max -23.4395;
    Float64 geospatial_lat_min -23.45972;
    String geospatial_lat_units "degrees_north";
    Float64 geospatial_lon_max 151.9802;
    Float64 geospatial_lon_min 151.9295;
    String geospatial_lon_units "degrees_east";
    String history 
"2024-11-14T17:00:50Z (local files)
2024-11-14T17:00:50Z https://erddap.bco-dmo.org/tabledap/bcodmo_dataset_926887_v1.das";
    String infoUrl "https://www.bco-dmo.org/dataset/926887";
    String institution "BCO-DMO";
    String license 
"The data may be used and redistributed for free but is not intended
for legal use, since it may contain inaccuracies. Neither the data
Contributor, ERD, NOAA, nor the United States Government, nor any
of their employees or contractors, makes any warranty, express or
implied, including warranties of merchantability and fitness for a
particular purpose, or assumes any legal liability for the accuracy,
completeness, or usefulness, of this information.";
    Float64 Northernmost_Northing -23.4395;
    String sourceUrl "(local files)";
    Float64 Southernmost_Northing -23.45972;
    String summary "Variable temperature regimes that expose corals to sub-lethal heat stress have been recognized as a mechanism to increase coral thermal tolerance and lessen coral bleaching. However, there is a need to better understand which thermal regimes maximize coral stress hardening. Here, standardized thermal stress assays were used to determine the relative thermal tolerance of three divergent genera of corals (Acropora, Pocillopora, Porites) originating from six reef sites representing an increasing gradient of annual mean diel temperature fluctuations of 1–3°C day-1. Bleaching severity and dark-acclimated photochemical yield (i.e., Fv/Fm) were quantified following exposure to five temperature treatments ranging from 23.0 to 36.3°C (see Related Datasets for temperature data). This data set contains photochemical yield and color score data used to determine effective dose 50 (ED50, thermal tolerance). It also includes images used for analysis of coral color, a proxy for bleaching severity.";
    String title "[Short-term heat stress assay Heron Island -  physiological data] - Photochemical yield and color score data from short-term heat stress assays performed with with corals collected from sites around Heron Island, southern Great Barrier Reef  in Sept and Oct of 2022 (Influence of environmental pH variability and thermal sensitivity on the resilience of reef-building corals to acidification stress)";
    Float64 Westernmost_Easting 151.9295;
  }
}

 

---

Using tabledap to Request Data and Graphs from Tabular Datasets

tabledap lets you request a data subset, a graph, or a map from a tabular dataset (for example, buoy data), via a specially formed URL. tabledap uses the OPeNDAP Data Access Protocol (DAP) and its selection constraints.

The URL specifies what you want: the dataset, a description of the graph or the subset of the data, and the file type for the response.

• (easy) You can get data by using the dataset's Data Access Form or Subset form. They make the URL for you.
• (easy) You can make a graph or map by using the dataset's Make A Graph form. It makes the URL for you.
• (not hard) You can bypass the forms and get the data or make a graph or map by generating the URL by hand or with a computer program or script.

Tabledap request URLs must be in the form
https://coastwatch.pfeg.noaa.gov/erddap/tabledap/datasetID.fileType{?query}
For example,
https://coastwatch.pfeg.noaa.gov/erddap/tabledap/pmelTaoDySst.htmlTable?longitude,latitude,time,station,wmo_platform_code,T_25&time>=2015-05-23T12:00:00Z&time<=2015-05-31T12:00:00Z
Thus, the query is often a comma-separated list of desired variable names, followed by a collection of constraints (e.g., variable<value), each preceded by '&' (which is interpreted as "AND").

For details, see the tabledap Documentation.

 

---

ERDDAP, Version 2.22
Disclaimers | Privacy Policy | Contact