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Dataset Title:  [Gene expression of Pocillopora damicornis] - Gene expression of Pocillopora
damicornis collected from reef of Heron Island, southern Great Barrier Reef
from Jan 2021 to Feb 2021 (Influence of environmental pH variability and
thermal sensitivity on the resilience of reef-building corals to acidification
stress)
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Institution:  BCO-DMO   (Dataset ID: bcodmo_dataset_942938_v1)
Information:  Summary ? | License ? | Metadata | Background (external link) | Files | Make a graph
 
Variable ?   Optional
Constraint #1 ?
Optional
Constraint #2 ?
   Minimum ?
 
   Maximum ?
 
 gene_id (unitless) ?          "Pocillopora_acuta_..."    "Pocillopora_acuta_..."
 RF13B (unitless) ?          0    40593
 RF13D (unitless) ?          0    45797
 RF14B (unitless) ?          0    48115
 RF14C (unitless) ?          0    35461
 RF15B (unitless) ?          0    44414
 RF15D (unitless) ?          0    44207
 RF16A (unitless) ?          0    100162
 RF16C (unitless) ?          0    76994
 RF17B (unitless) ?          0    36105
 RF17D (unitless) ?          0    30289
 RF18B (unitless) ?          0    29505
 RF18D (unitless) ?          0    27026
 RF19B (unitless) ?          0    37639
 RF19C (unitless) ?          0    39125
 RF20B (unitless) ?          0    26785
 RF20C (unitless) ?          0    38874
 RF22B (unitless) ?          0    66604
 RF22C (unitless) ?          0    33514
 RF23A (unitless) ?          0    36523
 RF23C (unitless) ?          0    38875
 RF24B (unitless) ?          0    32355
 RF24D (unitless) ?          0    53252
 RF25A (unitless) ?          0    60189
 RF25C (unitless) ?          0    37914
 RS11B (unitless) ?          0    45155
 RS11D (unitless) ?          0    36079
 RS12A (unitless) ?          0    81921
 RS12C (unitless) ?          0    85499
 RS13A (unitless) ?          0    35184
 RS13C (unitless) ?          0    41237
 RS14B (unitless) ?          0    80186
 RS14C (unitless) ?          0    96863
 RS15B (unitless) ?          0    62596
 RS15D (unitless) ?          0    53677
 RS1B (unitless) ?          0    52092
 RS1C (unitless) ?          0    54866
 RS2B (unitless) ?          0    49558
 RS2C (unitless) ?          0    36852
 RS3B (unitless) ?          0    48437
 RS3D (unitless) ?          0    53851
 RS6A (unitless) ?          0    33734
 RS6D (unitless) ?          0    62965
 RS7B (unitless) ?          0    43786
 RS7C (unitless) ?          0    83020
 RS8B (unitless) ?          0    48007
 RS8C (unitless) ?          0    40995
 RS9A (unitless) ?          0    40481
 RS9C (unitless) ?          0    53216
 
Server-side Functions ?
 distinct() ?
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File type: (more information)

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(Please be patient. It may take a while to get the data.)


 

The Dataset Attribute Structure (.das) for this Dataset

Attributes {
 s {
  gene_id {
    String long_name "Gene_id";
    String units "unitless";
  }
  RF13B {
    Int32 actual_range 0, 40593;
    String long_name "Rf13b";
    String units "unitless";
  }
  RF13D {
    Int32 actual_range 0, 45797;
    String long_name "Rf13d";
    String units "unitless";
  }
  RF14B {
    Int32 actual_range 0, 48115;
    String long_name "Rf14b";
    String units "unitless";
  }
  RF14C {
    Int32 actual_range 0, 35461;
    String long_name "Rf14c";
    String units "unitless";
  }
  RF15B {
    Int32 actual_range 0, 44414;
    String long_name "Rf15b";
    String units "unitless";
  }
  RF15D {
    Int32 actual_range 0, 44207;
    String long_name "Rf15d";
    String units "unitless";
  }
  RF16A {
    Int32 actual_range 0, 100162;
    String long_name "Rf16a";
    String units "unitless";
  }
  RF16C {
    Int32 actual_range 0, 76994;
    String long_name "Rf16c";
    String units "unitless";
  }
  RF17B {
    Int32 actual_range 0, 36105;
    String long_name "Rf17b";
    String units "unitless";
  }
  RF17D {
    Int32 actual_range 0, 30289;
    String long_name "Rf17d";
    String units "unitless";
  }
  RF18B {
    Int32 actual_range 0, 29505;
    String long_name "Rf18b";
    String units "unitless";
  }
  RF18D {
    Int32 actual_range 0, 27026;
    String long_name "Rf18d";
    String units "unitless";
  }
  RF19B {
    Int32 actual_range 0, 37639;
    String long_name "Rf19b";
    String units "unitless";
  }
  RF19C {
    Int32 actual_range 0, 39125;
    String long_name "Rf19c";
    String units "unitless";
  }
  RF20B {
    Int32 actual_range 0, 26785;
    String long_name "Rf20b";
    String units "unitless";
  }
  RF20C {
    Int32 actual_range 0, 38874;
    String long_name "Rf20c";
    String units "unitless";
  }
  RF22B {
    Int32 actual_range 0, 66604;
    String long_name "Rf22b";
    String units "unitless";
  }
  RF22C {
    Int32 actual_range 0, 33514;
    String long_name "Rf22c";
    String units "unitless";
  }
  RF23A {
    Int32 actual_range 0, 36523;
    String long_name "Rf23a";
    String units "unitless";
  }
  RF23C {
    Int32 actual_range 0, 38875;
    String long_name "Rf23c";
    String units "unitless";
  }
  RF24B {
    Int32 actual_range 0, 32355;
    String long_name "Rf24b";
    String units "unitless";
  }
  RF24D {
    Int32 actual_range 0, 53252;
    String long_name "Rf24d";
    String units "unitless";
  }
  RF25A {
    Int32 actual_range 0, 60189;
    String long_name "Rf25a";
    String units "unitless";
  }
  RF25C {
    Int32 actual_range 0, 37914;
    String long_name "Rf25c";
    String units "unitless";
  }
  RS11B {
    Int32 actual_range 0, 45155;
    String long_name "Rs11b";
    String units "unitless";
  }
  RS11D {
    Int32 actual_range 0, 36079;
    String long_name "Rs11d";
    String units "unitless";
  }
  RS12A {
    Int32 actual_range 0, 81921;
    String long_name "Rs12a";
    String units "unitless";
  }
  RS12C {
    Int32 actual_range 0, 85499;
    String long_name "Rs12c";
    String units "unitless";
  }
  RS13A {
    Int32 actual_range 0, 35184;
    String long_name "Rs13a";
    String units "unitless";
  }
  RS13C {
    Int32 actual_range 0, 41237;
    String long_name "Rs13c";
    String units "unitless";
  }
  RS14B {
    Int32 actual_range 0, 80186;
    String long_name "Rs14b";
    String units "unitless";
  }
  RS14C {
    Int32 actual_range 0, 96863;
    String long_name "Rs14c";
    String units "unitless";
  }
  RS15B {
    Int32 actual_range 0, 62596;
    String long_name "Rs15b";
    String units "unitless";
  }
  RS15D {
    Int32 actual_range 0, 53677;
    String long_name "Rs15d";
    String units "unitless";
  }
  RS1B {
    Int32 actual_range 0, 52092;
    String long_name "Rs1b";
    String units "unitless";
  }
  RS1C {
    Int32 actual_range 0, 54866;
    String long_name "Rs1c";
    String units "unitless";
  }
  RS2B {
    Int32 actual_range 0, 49558;
    String long_name "Rs2b";
    String units "unitless";
  }
  RS2C {
    Int32 actual_range 0, 36852;
    String long_name "Rs2c";
    String units "unitless";
  }
  RS3B {
    Int32 actual_range 0, 48437;
    String long_name "Rs3b";
    String units "unitless";
  }
  RS3D {
    Int32 actual_range 0, 53851;
    String long_name "Rs3d";
    String units "unitless";
  }
  RS6A {
    Int32 actual_range 0, 33734;
    String long_name "Rs6a";
    String units "unitless";
  }
  RS6D {
    Int32 actual_range 0, 62965;
    String long_name "Rs6d";
    String units "unitless";
  }
  RS7B {
    Int32 actual_range 0, 43786;
    String long_name "Rs7b";
    String units "unitless";
  }
  RS7C {
    Int32 actual_range 0, 83020;
    String long_name "Rs7c";
    String units "unitless";
  }
  RS8B {
    Int32 actual_range 0, 48007;
    String long_name "Rs8b";
    String units "unitless";
  }
  RS8C {
    Int32 actual_range 0, 40995;
    String long_name "Rs8c";
    String units "unitless";
  }
  RS9A {
    Int32 actual_range 0, 40481;
    String long_name "Rs9a";
    String units "unitless";
  }
  RS9C {
    Int32 actual_range 0, 53216;
    String long_name "Rs9c";
    String units "unitless";
  }
 }
  NC_GLOBAL {
    String cdm_data_type "Other";
    String Conventions "COARDS, CF-1.6, ACDD-1.3";
    String creator_email "info@bco-dmo.org";
    String creator_name "BCO-DMO";
    String creator_url "https://www.bco-dmo.org/";
    String doi "10.26008/1912/bco-dmo.942938.1";
    String history 
"2025-03-14T13:31:44Z (local files)
2025-03-14T13:31:44Z https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_942938_v1.html";
    String infoUrl "https://www.bco-dmo.org/dataset/942938";
    String institution "BCO-DMO";
    String license 
"The data may be used and redistributed for free but is not intended
for legal use, since it may contain inaccuracies. Neither the data
Contributor, ERD, NOAA, nor the United States Government, nor any
of their employees or contractors, makes any warranty, express or
implied, including warranties of merchantability and fitness for a
particular purpose, or assumes any legal liability for the accuracy,
completeness, or usefulness, of this information.";
    String sourceUrl "(local files)";
    String summary 
"Corals residing in habitats that experience frequent seawater pCO2 variability may possess an enhanced capacity to cope with ocean acidification. Yet, we lack a clear understanding of the molecular toolkit enabling acclimatization to environmental extremes, and how life-long exposure to pCO2 variability influences biomineralization. 

We examined the gene expression responses and micro-skeletal characteristics of Pocillopora damicornis originating from the reef flat and reef slope of Heron Island, southern Great Barrier Reef. The reef flat (454 ± 3.0) and reef slope (418 ± 1.9) had similar mean seawater pCO2 (µatm; mean ± SE), but the reef flat experienced twice the mean daily pCO2 amplitude (range of 797v. 399  µatm day-1, respectively). A controlled mesocosm experiment was conducted over eight weeks, from mid-January to late-March 2021, exposing P. damicornis from the reef slope and reef flat to stable (218±9) or variable (911±31) diel pCO2 fluctuations (µatm; mean ± SE). This dataset includes the gene expression data for these samples.";
    String title "[Gene expression of Pocillopora damicornis] - Gene expression of Pocillopora damicornis collected from reef of Heron Island, southern Great Barrier Reef from Jan 2021 to Feb 2021 (Influence of environmental pH variability and thermal sensitivity on the resilience of reef-building corals to acidification stress)";
  }
}

 

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The URL specifies what you want: the dataset, a description of the graph or the subset of the data, and the file type for the response.

Tabledap request URLs must be in the form
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For example,
https://coastwatch.pfeg.noaa.gov/erddap/tabledap/pmelTaoDySst.htmlTable?longitude,latitude,time,station,wmo_platform_code,T_25&time>=2015-05-23T12:00:00Z&time<=2015-05-31T12:00:00Z
Thus, the query is often a comma-separated list of desired variable names, followed by a collection of constraints (e.g., variable<value), each preceded by '&' (which is interpreted as "AND").

For details, see the tabledap Documentation.


 
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