[Ulva: CHN and stable isotopes] - Stable isotope ratios and mass of carbon and nitrogen in Ulva cells under ocean acidification conditions (Seaweed OA Resilience project) (Ocean Acidification: Scope for Resilience to Ocean Acidification in Macroalgae)

This dataset includes carbon and nitrogen content and stable isotope values from Ulva lactuca tissue grown at 15\u00b0 C and various CO2 levels, from May 2015 through July 2015.

cdm_data_type = Other
VARIABLES:
Sample_ID (unitless)
pCO2_avg (P CO2 Avg, microatmospheres (µatm))
pCO2_sd (P CO2 Sd, microatmospheres (µatm))
d13C (D13 C, parts per thousand (ppt))
C_mass_sample (micrograms)
d15N (D15 N, parts per thousand (ppt))
N_mass_sample (micrograms)
C_N (unitless)
mass_plant (milligrams)


[Ulva: Growth] - Growth rates of Ulva exposed to different average and variability of pCO2 (Seaweed OA Resilience project) (Ocean Acidification: Scope for Resilience to Ocean Acidification in Macroalgae)

This dataset includes growth rates of Ulva measured at three weekly intervals as well as integrated over the experimental trial grown in culture under various pCO2 levels from May through July 2015.

cdm_data_type = Other
VARIABLES:
Label (unitless)
pCO2_avg (P CO2 Avg, microatmospheres (µatm))
pCO2_sd (P CO2 Sd, microatmospheres (µatm))
GP1i (grams)
GP1f (grams)
GP2i (grams)
GP2f (grams)
GP3i (grams)
GP3f (grams)
RGR_GP1 (%/day)
RGR_GP2 (%/day)
RGR_GP3 (%/day)
RGR_GP1to3_Net (%/day)
added_mass (grams)
RGR_GP1to3_Abs (grams)
Total_mass (grams)


[Ulva: pH and temperature time-series] - Time-series at 10 minute sampling interval of pH and temperature in Ulva culture pots (Seaweed OA Resilience project) (Ocean Acidification: Scope for Resilience to Ocean Acidification in Macroalgae)

This dataset includes time-series at 10-minute sampling interval of pH and temperature in each Ulva lactuca culture pot grown at 15\u00b0 C and various CO2 levels during trials 3 and 4 (May 30 through July 2015). Data for trial 2 were lost.

cdm_data_type = Other
VARIABLES:
date (unitless)
time2 (Time, unitless)
ISO_DateTime_Local (ISO Date Time Local, unitless)
pH_S1P1 (P H S1 P1, unitless)
T_S1P1 (T S1 P1, degrees Celsius)
pH_S1P2 (P H S1 P2, unitless)
T_S1P2 (T S1 P2, degrees Celsius)
pH_S2P3 (P H S2 P3, unitless)
T_S2P3 (T S2 P3, degrees Celsius)
pH_S2P4 (P H S2 P4, unitless)
T_S2P4 (T S2 P4, degrees Celsius)
pH_S2P5 (P H S2 P5, unitless)
T_S2P5 (T S2 P5, degrees Celsius)
pH_S2P6 (P H S2 P6, unitless)
T_S2P6 (T S2 P6, degrees Celsius)
pH_S3P7 (P H S3 P7, unitless)
T_S3P7 (T S3 P7, degrees Celsius)
pH_S3P8 (P H S3 P8, unitless)
T_S3P8 (T S3 P8, degrees Celsius)
pH_S3P9 (P H S3 P9, unitless)
T_S3P9 (T S3 P9, degrees Celsius)
pH_3P10 (P H 3 P10, unitless)
T_S3P10 (T S3 P10, degrees Celsius)


[Ulva: pH Drift] - Carbonate chemistry over a time course with Ulva in pH drift experiments (Seaweed OA Resilience project) (Ocean Acidification: Scope for Resilience to Ocean Acidification in Macroalgae)

Carbonate chemistry measurements over a time course with Ulva in pH drift experiments.

cdm_data_type = Other
VARIABLES:
Label (unitless)
pCO2_avg (P CO2 Avg, microatmospheres (µatm))
pCO2_sd (P CO2 Sd, microatmospheres (µatm))
Sal_in (parts per thousand (ppt))
Temp_in (degrees Celsius)
ALK (micromoles/kilogram)
pH_t0 (P H T0, unitless)
pH_t24 (P H T24, unitless)
DIC_t0 (micromoles/kilogram (µmol/kg))
DIC_t24 (micromoles/kilogram (µmol/kg))
CO2_t0 (micromoles/kilogram (µmol/kg))
CO2_t24 (micromoles/kilogram (µmol/kg))
HCO3_t0 (micromoles/kilogram (µmol/kg))
HCO3_t24 (micromoles/kilogram (µmol/kg))
CO3_t0 (micromoles/kilogram (µmol/kg))
CO3_t24 (micromoles/kilogram (µmol/kg))


[Ulva: Photosynthesis and respiration] - Rates of photosynthesis and respiration by Ulva exposed to different average and variability of pCO2 (Seaweed OA Resilience project) (Ocean Acidification: Scope for Resilience to Ocean Acidification in Macroalgae)

This dataset includes rates of photosynthesis and respiration by Ulva during culture experiments grown at 15 degrees C under various pCO2 levels, during May through July 2015.

cdm_data_type = Other
VARIABLES:
Label (unitless)
pCO2_avg (P CO2 Avg, microatmospheres (µatm))
pCO2_sd (P CO2 Sd, microatmospheres (µatm))
Off1C (Off1 C, milligrams O2/liter/second (mg L-1 s-1))
OnC (On C, milligrams O2/liter/second (mg L-1 s-1))
Off2C (Off2 C, milligrams O2/liter/second (mg L-1 s-1))
Off1A (Off1 A, milligrams O2/liter/second (mg L-1 s-1))
OnA (On A, milligrams O2/liter/second (mg L-1 s-1))
Off2A (Off2 A, milligrams O2/liter/second (mg L-1 s-1))
Fresh_Weight (grams)
DRespC (DResp C, mol O2/g/min  NA)
PmaxC (Pmax C, mol O2/g/min  NA)
LRespC (LResp C, mol O2/g/min  NA)
DRespA (DResp A, mol O2/g/min  NA)
PmaxA (Pmax A, mol O2/g/min  NA)
LRespA (LResp A, mol O2/g/min  NA)


[Ulva: seawater delta13C] - Stable isotope ratio and concentration of carbon in seawater from Ulva OA experiments (Seaweed OA Resilience project) (Ocean Acidification: Scope for Resilience to Ocean Acidification in Macroalgae)

This dataset includes stable isotope ratio and concentration of carbon in seawater during Ulva culture experiments grown at 15C temperatures under various CO2 levels, during May through July 2015.

cdm_data_type = Other
VARIABLES:
Sample (unitless)
pCO2_avg (P CO2 Avg, microatmospheres (µatm))
pCO2_sd (P CO2 Sd, microatmospheres (µatm))
d13CVPDB (D13 CVPDB, parts per thousand (ppt))


[underway Cesium Isotopes] - Hydrocast isotope concentrations of Cesium 137 and 134 from the R/V Ka`imikai-O-Kanaloa KOK1108 cruise in June 2011 in the Northwest Pacific Ocean (Fukushima Radionuclide Levels project) (Establishing Radionuclide Levels in the Atlantic and Pacific Oceans Originating from the Fukushima Daiichi Nuclear Power Facility)

Hydrocast isotope concentrations of Cesium 137 and 134 from the R/V Ka`imikai-O-Kanaloa KOK1108 cruise in June 2011 in the Northwest Pacific Ocean.

cdm_data_type = Other
VARIABLES:
sta (dimensionless)
date (unitless)
time2 (Time, hhmm)
date_local (yymmdd)
time_local (hhmm)
latitude (degrees_north)
longitude (degrees_east)
event (dimensionless)
depth_n (Depth, meters)
Cs137 (Bq/meter^3)
err_Cs137 (Bq/meter^3)
Cs134 (Bq/meter^3)
err_Cs134 (Bq/meter^3)
Cs134_Cs137 (Bq/meter^3)
err_Cs134_Cs137 (Bq/meter^3)


[Underway Chl] - Particulate chlorophyll data set from samples collected using ship’s surface underway system taken on board of the R/V Oceanus OC1701A, OC1611B, OC1603B, OC1602A, OC1601A in the Oregon Coast (47-43 N, 126-124 W) from 2016 to 2017 (Coastal Ocean Carbon Cycling during Wintertime Conditions)

Particulate chlorophyll data set and added temperature and salinity from samples collected using ship\u2019s surface underway system taken on board of the R/V Oceanus OC1701A, OC1611B, OC1603B, OC1602A, OC1601A in the Oregon Coast (47-43 N, 126-124 W) from 2016 to 2017.

cdm_data_type = Other
VARIABLES:
Cruise_ID (unitless)
latitude (degrees_north)
longitude (degrees_east)
Date_Time_PST (unitless)
Temperature (degrees Celsius (°C))
Salinity (Sea Water Practical Salinity, unitless)
Chlorophyll (Concentration Of Chlorophyll In Sea Water, miligrams of Chl per cubic meter of water (mg/m3))
time (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)


[underway chloro] - Underway chlorophyll data from RVIB Nathaniel B. Palmer and ARSV Laurence M. Gould cruises NBP0104, LMG0203, and NBP0204 in the Southern Ocean from 2001-2002 (SOGLOBEC project) (U.S. GLOBEC Southern Ocean)

Underway chlorophyll data from RVIB Nathaniel B. Palmer and ARSV Laurence M. Gould cruises NBP0104, LMG0203, and NBP0204 in the Southern Ocean from 2001-2002 (SOGLOBEC project)

cdm_data_type = Other
VARIABLES:
cruiseid
year
yrday_local (YYY)
latitude (degrees_north)
longitude (degrees_east)
chl_a (Concentration Of Chlorophyll In Sea Water, micrograms/liter)
phaeo (micrograms/liter)


[Underway Data] - Underway data from estuary transects in Coastal Gulf of Maine (Pleasant, Maine; St. John, New Brunswick) in May and October of 2018 and 2019 (Collaborative Research: Organic Alkalinity: Impacts of the [OTHER] Alkalinity on Estuary and Coastal Ocean Chemistry)

This dataset contains underway data from four organic alkalinity estuary transects, in May and October of 2018 and 2019, completed in the Pleasant (Maine, USA) and St. John (New Brunswick, Canada) estuaries. See "Related Datasets" section for alkalinity data.  Discrete samples were collected at intervals of salinity along each estuary.  An underway measurements system was also operated during each transect.  Discrete samples were analyzed via a number of methods described below.  Underway measurements were collected using the procedures described in Hunt et al. (2013).

Organic alkalinity is a poorly understood component of the estuarine and coastal ocean acid-base system.  This lack of understanding makes assessment of ocean acidification vulnerability and inorganic carbon dynamics more difficult.  However, the methods used to quantify organic alkalinity and its effects on the acid-base system are not standardized.  In this work we examined several approaches for the measurement of organic alkalinity, and their application to inorganic carbon dynamics.

cdm_data_type = Other
VARIABLES:
year (unitless)
month (unitless)
day (unitless)
hour (unitless)
minute (unitless)
second (unitless)
time (Iso_datetime_utc, seconds since 1970-01-01T00:00:00Z)
Julian_Day (unitless)
secDay (sssss)
lat (degrees_north)
longitude (degrees_east)
heading (degrees)
speed (meters per second (m/s))
Wt (degreesC)
cond (millimho per centimeter (mmho/cm))
... (13 more variables)


[Underway pCO2] - Underway pCO2 from the R/V Pelican cruise GOM_UW_1704 conducted in the Northern Gulf of Mexico in April 2017. (Collaborative Research: pH Dynamics and Interactive Effects of Multiple Processes in a River-Dominated Eutrophic Coastal Ocean)

Underway pCO2 from R/V Pelican cruise conducted in the northern Gulf of Mexico (27.5 N, 30 N, 88 W, 94 W) from April 5th to 16th in 2017. The precision of pCO2 is \u00b12 \u00b5atm.

cdm_data_type = Other
VARIABLES:
Region (unitless)
Cruise (unitless)
time (GPS Date Time UTC, seconds since 1970-01-01T00:00:00Z)
longitude (degrees_east)
latitude (degrees_north)
Temperature (degrees Celsius (°C))
Salinity (Sea Water Practical Salinity, PSU)
pCO2 (P CO2, microatmosphere (uatm))
Flag_pCO2 (Flag P CO2, unitless)


[Underway POM] - Particulate organic matter data set from samples collected using ship’s surface underway system taken on board of the R/V Oceanus OC1701A, OC1611B, OC1603B, OC1602A, OC1601A in the Oregon Coast (47-43 N, 126-124 W) from 2016 to 2017. (Coastal Ocean Carbon Cycling during Wintertime Conditions)

Particulate organic matter data set and added temperature and salinity from samples collected using ship\u2019s surface underway system taken on board of the R/V Oceanus OC1701A, OC1611B, OC1603B, OC1602A, OC1601A in the Oregon Coast (47-43 N, 126-124 W) from 2016 to 2017.

cdm_data_type = Other
VARIABLES:
Cruise (unitless)
latitude (degrees_north)
longitude (degrees_east)
Date_Time_PST (unitless)
Temperature (degrees Celsius (°C))
Salinity (Sea Water Practical Salinity, unitless)
PN (micromoles N per liter of water (um/L))
POC (Particulate Organic Carbon, micromoles C per liter of water (um/L))
Beam_attenuation (1/m)
time (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)


[underway_met] - Underway MET data collected on multiple GLOBEC Long Term Observation Program (LTOP) cruises aboard R/V Wecoma in the Northeast Pacific from 1999-2003 (U.S. GLOBEC Northeast Pacific)

Underway MET data collected on GLOBEC Long Term Observation Program (LTOP) cruises (1998-2004) aboard R/V Wecoma. Data are preliminary. No error-checking or in-situ calibrations (except for salinity) have been performed.

cdm_data_type = Other
VARIABLES:
cruiseid (dimensionless)
ship (dimensionless)
year (dimensionless)
yrday (yearday, 1-365)
month_gmt (month, 1-12)
day_gmt (day, 1-31)
time_gmt (HHMM)
latitude (degrees_north)
longitude (degrees_east)
temp_ss5 (degreesC)
temp_ss (degrees C)
cond_ss5 (siemens/meter)
sal_ss5 (PSU)
flvolt_mV (Flvolt M V, milliVolts)
depth_w_12 (Depth, meters)
press_bar (millibars)
temp_air (degrees C)
temp_air2 (degrees C)
humidity (percent)
radiation_s (watts/m^2)
radiation_l (watts/m^2)
PAR_doghouse (quanta/(cm^2*s))
temp_pir_case (degrees C)
temp_pir_hemi (degrees C)
gyro (degrees from true North)
... (10 more variables)


[Urchin and Abalone Density Responses to Pycnopodia Cages] - Urchin and abalone density responses to caged Pycnopodia field experiment in Sitka Sound urchin barrens, February 2023 from from February 2023 (High latitude kelp dynamics project) (CAREER: Energy fluxes and community stability in a dynamic, high-latitude kelp ecosystem)

We conducted a field experiment in three replicate sea urchin barrens in Sitka Sound, AK (57°2'1"N 135°15'51"W) in February of 2023, where we deployed kelp blades at discrete distances on four meter radial cables from caged adult P. helianthoides and control cages for 24 hours. Via SCUBA we performed quadrat density surveys of three important kelp forest grazers (Haliotis kamtschatkana, Strongylocentrotus droebachiensis, and Mesocentrotus franciscanus) at discrete distances from the cage before, 15-30 min after, and 24 hours after P. helianthoides were added to the treatment cages.

cdm_data_type = Other
VARIABLES:
QuadID (unitless)
RayID (unitless)
Site (unitless)
latitude (degrees_north)
longitude (Long, degrees_east)
Treatment (unitless)
Replicate (unitless)
TreatRep (unitless)
Ray (unitless)
Date (unitless)
Diver (unitless)
Survey (unitless)
HoursElapsed (hours)
depth_f (Depth_ft, feet (ft))
depth (Depth_m, m)
Quad (unitless)
Dist_m (meters (m))
Species (unitless)
Count (individual)
Density_m2 (meters squared (m2))
Notes (unitless)


[UW FHL Temperature & Salinity] - UW FHL Temperature & Salinity data taken at Friday Harbor, WA between between January 1, 2010 and January 1, 2016 (Effects of Ocean Acidification on Coastal Organisms: An Ecomaterials Perspective)

Hourly seawater temperature and salinity values taken by an SBE 37 MicroCAT at UW FHL (University of Washington, Friday Harbor Laboratories) in Friday Harbor between January 1, 2010 and January 1, 2016.

cdm_data_type = Other
VARIABLES:
Date (unitless)
Temperature (degrees Celcius (C))
Salinity (Sea Water Practical Salinity, PSU)
time (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)
latitude (degrees_north)
longitude (degrees_east)


[VAHINE nitrogen] - Dissolved and sinking particulate organic nitrogen data from a large volume mesocosm experiment in the Noumea Lagoon, New Caledonia, measured from January to February 2013 (Quantifying nitrogen fixation along unique geochemical gradients in the southwest Pacific Ocean)

This dataset includes water column dissolved organic nitrogen (DON) concentration and d15N data, as well as sinking particulate nitrogen d15N (\u201cPNsink d15N\u201d) data. These samples were collected inside triplicate (\u201cM1\u201d, \u201cM2\u201d, and \u201cM3\u201d) large volume (i.e., 2.3 m diameter, 15 m deep) mesocosm experiments deployed in a lagoon off of Noumea, New Caledonia. DON samples were collected at 6 m depth daily by a Teflon pump and PVC tubing. PNsink d15N samples were collected daily by SCUBA divers who removed a screw-top plastic bottle from the bottom of the plastic mesocosm. \u201cSwimmers\u201d were removed from the PNsink d15N samples prior to analysis.\r\n\r\nThese measurements were made as part of project \VAriability of vertical and tropHIc transfer of diazotroph derived N in the south wEst Pacific\ (VAHINE) to study the fate of fixed nitrogen in the oceanic pelagic food web and its potential impact on carbon export. The field campaign of VAHINE took place in the South West Pacific (New Caledonia) in January and February of 2013 and involved 16 scientists from France, Israel, Germany and the USA.

cdm_data_type = Other
VARIABLES:
Sampling_Date (unitless)
M1_DON (micromolar (uM))
M1_DONd15N (M1 DONd15 N, per mil (0/00))
M2_DON (micromolar (uM))
M2_DONd15N (M2 DONd15 N, per mil (0/00))
M3_DON (micromolar (uM))
M3_DONd15N (M3 DONd15 N, per mil (0/00))
M1_d15NPNsink (M1 D15 NPNsink, per mil (0/00))
M2_d15NPNsink (M2 D15 NPNsink, per mil (0/00))
M3_d15NPNsink (M3 D15 NPNsink, per mil (0/00))


[vbs] - Volume backscatter acoustics data collected on R/V Albatross IV cruises AL9205 and AL9607 in the Gulf of Maine and Georges Bank in 1992 and 1996 (GB project) (U.S. GLOBEC Georges Bank)

Volume backscatter acoustics data collected on R/V Albatross IV cruises AL9205 and AL9607 in the Gulf of Maine and Georges Bank in 1992 and 1996 (GB project)

cdm_data_type = Other
VARIABLES:
cruiseid
year
track_line
yrday_utc (dec. yearday)
latitude (degrees_north)
longitude (degrees_east)
depth_bin_2 (Depth, meters)
transducer (meters)
vbs_coef (meter**-1)


[vent chemical composition-Crab Spa] - Chemical composition of diffuse flow vent fluids collected from the Crab Spa site at East Pacific Rise during the AT26-10 oceanographic expedition, Jan. 2014 (Microbial Communities at Deep-Sea Vents project) (An Integrated Study of Energy Metabolism, Carbon Fixation, and Colonization Mechanisms in Chemosynthetic Microbial Communities at Deep-Sea Vents)

This dataset includes\u00a0chemical composition (Cl, SO4, Na, K, Mg, and Ca
concentrations) of diffuse flow vent fluids collected from the Crab Spa
(9.8398\u00ba N, 104.2913\u00ba W) site at East Pacific Rise during the
RV/Atlantic AT26-10 oceanographic expedition, Jan. 2014.

cdm_data_type = Other
VARIABLES:
date (unitless)
site (unitless)
latitude (degrees_north)
longitude (degrees_east)
depth (m)
sample (unitless)
Cl (mmoles/kg)
Cl_stdev (mmoles/kg)
SO4 (mmoles/kg)
SO4_stdev (mmoles/kg)
Na (mmoles/kg)
K (mmoles/kg)
Mg (mmoles/kg)
Ca (mmoles/kg)


[Vertebrate home range and body size] - Home range and body size data compiled from the literature for marine and terrestrial vertebrates (Adaptations of fish and fishing communities to rapid climate change)

Home range and body size data compiled from the literature for marine and terrestrial vertebrates.

cdm_data_type = Other
VARIABLES:
System (unitless)
Group (unitless)
Species (unitless)
BM (grams (g))
HR (square kilometers (km^2))
Refs (unitless)


[Vertical Plankton Tow - VPT] - Vertical Plankton Tow (VPT) data from 1997 - 2003 from multiple cruises from the Northeast Pacific, California Current System (NEP project) (U.S. GLOBEC Northeast Pacific)

Vertical Plankton Tow (VPT) data from 1997 - 2003 from multiple cruises from the Northeast Pacific, California Current System

cdm_data_type = Other
VARIABLES:
cruise_id (dimensionless)
year (dimensionless)
program (dimensionless)
cast (dimensionless)
station (dimensionless)
latitude (degrees_north)
longitude (degrees_east)
depth_w (Depth, meters)
sample_id (dimensionless)
min_sample_depth (meters)
depth (Max Sample Depth, m)
month_local (dimensionless)
day_local (dimensionless)
time_local (dimensionless)
d_n_flag (dimensionless)
gear_type (dimensionless)
gear_area_m2 (m^2)
gear_mesh (mm)
vol_filt (meters^3)
counter_id (dimensionless)
comments (dimensionless)
perc_counted (0-100%)
nodc_code (dimensionless)
species (dimensionless)
life_stage (dimensionless)
abund (individuals per meter^3)


[viable cell counts] - Viable cell counts on the bacteria in the seawater collected in the Niskin bottles during Leggo drops 1 and 3 on R/V Falkor cruise FK141215 in the Challenger Deep, Mariana Trench in December 2014 (Patterns of Microbial Community Structure Within and Between Hadal Environments)

Viable cell counts on the bacteria in the seawater collected in the Niskin bottles during Leggo drops 1 and 3.

cdm_data_type = Other
VARIABLES:
drop_name (unitless)
time (ISO Date Time Deploy, seconds since 1970-01-01T00:00:00Z)
ISO_DateTime_recover (ISO Date Time Recover, unitless)
latitude (degrees_north)
longitude (degrees_east)
dilution (unitless)
colonies_plate_1 (count)
colonies_plate_2 (count)
avg_CFUs_per_mL (Avg CFUs Per M L, CFU/mL)


[Video transects (Wood Fall project)] - Video transects (Wood Fall project) (The energetic assembly of biological communities: a test with deep-sea woodfalls)

Video transects (Wood Fall project)

cdm_data_type = Other
VARIABLES:
transect_number (unitless)
date (unitless)
rov_dive (dimensionless)
start_time (hh:mm)
end_time (hh:mm)
latitude (degrees_north)
end_latitude (Latitude, decimal degrees)
longitude (degrees_east)
end_longitude (Longitude, decimal degrees)
heading (degrees)
start_depth (meters)
depth (End Depth, m)


[Virus production at a hydrothermal vent site] - Virus and prokaryote abundances from experiments conducted with samples collected at a hydrothermal vent site by ROV SuBastian during R/V Falkor (too) expedition FKt230627 along the East Pacific Rise in July of 2023 (The Underworld of Hydrothermal Vents)

We used the virus-dilution technique to quantify lytic virus production at nine sites across vent, sub-vent, and non-vent habitats along the East Pacific Rise during expedition FKt230627 aboard R/V Falkor(too). This technique leverages the density-dependent nature of viral infection, preventing new infections by dilution. Samples were collected via ROV SuBastian, sequentially filtered to remove larger particles, and concentrated using tangential-flow filtration. Duplicate incubations were set up with prokaryotic concentrate and virus-free water, pressurized to 250 bar, and incubated in the dark at in situ temperatures for 30 hours. Subsamples were taken every six hours for enumeration of prokaryotes and viruses via flow cytometry. Parallel experiments were conducted at surface pressure to assess the impact of pressure on virus production rates. The methodology ensures observed increases in viral abundance are due to pre-existing infections. The experiments were conducted aboard R/V Falkor(too) between 5-22 July 2023 by Tinkara Tinta and Nicole Krause. Prokaryotes and viruses were enumerated flow-cytometrically back in the lab by Christian Winter.

cdm_data_type = Other
VARIABLES:
dive (unitlesss)
sample_id (unitlesss)
subsample_id (unitlesss)
habitat (unitlesss)
latitude (degrees_north)
longitude (degrees_east)
depth (m)
temperature (degrees Celsius (degC))
incubated_at_250bar (unitless)
date_local (unitless)
time_local (unitless)
time (Iso_datetime_utc, seconds since 1970-01-01T00:00:00Z)
prokaryotes (Nx10^4 mL^-1)
viruses (Nx10^4 mL^-1)


[Visual Bleaching Scores Summer 2018] - Results of the quantification of symbiont cell numbers from 400 Acropora hyacinthus colonies subjected to experimental bleaching in the summer of 2018 in Palau. (Predicting the global location of heat tolerant corals: Palau patch reefs as a general model)

Results of the quantification of symbiont cell numbers from 400 Acropora hyacinthus colonies subjected to experimental bleaching in the summer of 2018 in Palau.

cdm_data_type = Other
VARIABLES:
Tank_Number (dimensionless)
Cycle_Number (dimensionless)
Date_Collected (unitless)
Reef (dimensionless)
Temperature (degrees Celsius)
Colony_Number (dimensionless)
Day (dimensionless)
Score (text)
Scorer_1 (unitless)
Scorer_2 (unitless)
Scorer_3 (unitless)


[Visual monitoring of A. cervicornis] - Bleaching, disease, and mortality on A. cervicornis individuals in Elliot Key, Florida during 2014 and 2015 (EMUCoReS project) (RAPID: A hyper-thermal anomaly in the Florida Reef Tract: An opportunity to explore the mechanisms underpinning patterns of coral bleaching and disease)

Bleaching, disease, and mortality on A. cervicornis individuals in Elliot Key, Florida during 2014 and 2015 (EMUCoReS project)

cdm_data_type = Other
VARIABLES:
month_sampled (unitless)
genet (unitless)
condition (unitless)
sample_number (unitless)
A3_S_fitti (percent)
B2_S_psygmophilium (percent)
D1a_S_trenchii (percent)


[VPR AR29] - Video Plankton Recorder environmental sensor data from the first cruise of SPIROPA project aboard the R/V Neil Armstrong to the New England Shelfbreak in April, 2018 (Collaborative Research:  Shelfbreak Frontal Dynamics: Mechanisms of Upwelling, Net Community Production, and Ecological Implications)

Video Plankton Recorder environmental sensor data from the first cruise of SPIROPA project in April 2018.

cdm_data_type = Other
VARIABLES:
time (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)
longitude (degrees_east)
latitude (degrees_north)
depth (m)
vprtimestep (unitless)
gmt (unitless)
date (unitless)
latitude_ (Latitude, degrees decimal minutes)
longitude_ (Longitude, degrees decimal minutes)
maxdepth (meters (m))
alt (meters (m))
roll (degrees)
pitch (degrees)
fluor (volts (V))
turb (micrograms per liter (ug/L))
par (Downwelling Photosynthetic Photon Radiance In Sea Water, microEinsteins/m^2/second (uE/m2/s))
oxy (volts (V))
sal (unitless)
temp (Temperature, degrees Celsius (C))


[VPR_ashjian_orig] - Video Plankton Recorder data from R/V Columbus Iselin, R/V Endeavor cruises CI9407, EN259, and EN262 in the Gulf of Maine and Georges Bank from 1994-1995 (GB project) (U.S. GLOBEC Georges Bank)

Video Plankton Recorder data from R/V Columbus Iselin, R/V Endeavor cruises CI9407, EN259, and EN262 in the Gulf of Maine and Georges Bank from 1994-1995

cdm_data_type = Other
VARIABLES:
cruiseid
year
brief_desc (dimensionless)
yrday0_gmt (YYY.Y)
month_gmt
day_gmt
time_gmt (HHmm.m)
latitude (degrees_north)
longitude (degrees_east)
press (decibars)
temp (Temperature, degrees centigrade)
sal (PSU)
sigma_t (kilograms/meter^3)
flvolt (volts)
fluor (relative units)
trans_v (volts)
dist_along_track (kilometers)
Hydroids (number/liter; close to presence or absence)
Other (number/liter; close to presence or absence)
Cerianthid (number/liter; close to presence or absence)
Calanus (number/liter; close to presence or absence)
Earlyphaeoproto (number/liter; close to presence or absence)
Phaeoproto (number/liter; close to presence or absence)
Marinesnow (number/liter; close to presence or absence)
Pteropod (number/liter; close to presence or absence)
Chaetognath (number/liter; close to presence or absence)
... (21 more variables)


[Vulnerability of coral reefs to bioerosion] - Vulnerability of coral reefs to bioerosion from land-based sources of pollution using parameters quantified by computerized tomography. (Collaborative Research: Identifying the Role of Basin-scale Climate Variability in the Decline of Atlantic Corals)

Coral Growth Parameters Quantified by Computerized Tomography (CT) for Growth Rate (cm/yr), Density (g/cm3), and Calcification Rates (g/cm2/yr), Percent Volume Erosion (%), Measured Bioerosion Rate (mg/ cm2/ yr), Predicted Bioerosion Rate (mg/cm2/ yr) Based on DeCarlo et al (2015).

cdm_data_type = Other
VARIABLES:
Date (unitless)
latitude (degrees_north)
longitude (degrees_east)
Sample_ID (unitless)
Core_Length (centimeters)
depth (Water Depth, m)
Lifespan (years)
Tissue_thickness (milimeters)
Growth_rate (centimeters per year)
Density (grams per centimeters cubed)
Bioerosion_volume (percent)
Calcification_rate (grams per square centimeter per year)
Bioerosion_rate (miligrams per square centimeter per year)
delta_N_15 (per mil)
delta_N_15_error (per mil)


[w0008 seasoar CTD] - SeaSoar CTD Data from R/V Wecoma cruise W0008 in the Northeast Pacific in 2000 as part of the U.S. GLOBEC program (NEP project) (U.S. GLOBEC Northeast Pacific)

SeaSoar CTD data from R/V Wecoma cruise W0008 in the Northeast Pacific in 2000 as part of the U.S. GLOBEC-NEP program.

cdm_data_type = Other
VARIABLES:
link
description


[Warm Core Ring Census (1980-2017)] - Yearly census of Gulf Stream Warm Core Ring formation from 1980 to 2017 (Collaborative Research: GLOBEC Pan Regional Synthesis: The Effect of Varying Freshwater Inputs on Regional Ecosystems in the North Atlantic)

Yearly census of Gulf Stream Warm Core Ring formation from 1980 to 2017. This continuous census file contains the formation and demise times and locations, and the area at formation for all 961 WCRs formed between 1980 and 2017 that lived for a week or more. Each row represents a unique Warm Core Ring and is identified by a unique alphanumeric code 'WEyyyymmddA', where 'WE' represents a Warm Eddy (as identified in the analysis charts); 'yyyymmdd' is the year, month and day of formation; and the last character 'A' represents the sequential sighting of the eddies in a particular year. For example, the first ring in 2017 having a trailing alphabet of 'E' indicates that four rings were carried over from 2016 which are still observed on January 1, 2017.

cdm_data_type = Other
VARIABLES:
WCR_Name (unitless)
DOB (unitless)
longitude (degrees_east)
latitude (degrees_north)
Area_km2 (square kilometers (km^2))
DOA (unitless)
Longitude_D (Longitude, decimal degrees)
Latitude_D (Latitude, decimal degrees)


[Water Chemistry] - Water chemistry from discrete seawater samples collected from 2012-2016 at Jarvis Island (Skeletal Records of Coral Reef Bleaching in the Central Equatorial Pacific)

This dataset contains information about discrete seawater samples collected from 2012-2016 on Jarvis Island for salinity, nutrients, total alkalinity (TA), and dissolved inorganic carbon (DIC) during each sampling period.

cdm_data_type = Other
VARIABLES:
date_UTC (unitless)
time_UTC (unitless)
latitude (degrees_north)
longitude (degrees_east)
salinity (Sea Water Practical Salinity, unitless)
temperature (degrees Celsius)
pressure (decibars (dbar))
PO4 (Mass Concentration Of Phosphate In Sea Water, micromoles per kilogram (umol/kg))
NO3_NO2 (Mole Concentration Of Nitrate In Sea Water, micromoles per kilogram (umol/kg))
TALK (micromoles per kilogram (umol/kg))
DIC (micromoles per kilogram (umol/kg))
nTALK (N TALK, micromoles per kilogram (umol/kg))
nDIC (N DIC, micromoles per kilogram (umol/kg))
pH (Sea Water Ph Reported On Total Scale, unitless)
pCO2 (P CO2, micro-atmospheres (uatm))
bicarbonate (micromoles per kilogram (umol/kg))
carbonate (micromoles per kilogram (umol/kg))
OM_ar (unitless)
time (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)


[Water Column Data - CTD] - Water column data from CTD casts along the East Siberian Arctic Shelf on R/V Oden during 2011 (ESAS Water Column Methane project) (The East Siberian Arctic Shelf as a Source of Atmospheric Methane: First Approach to Quantitative Assessment)

Water column data from CTD casts along the East Siberian Arctic Shelf on R/V Oden during 2011 (ESAS Water Column Methane project)

cdm_data_type = Other
VARIABLES:
station (unitless)
latitude (degrees_north)
longitude (degrees_east)
date (unitless)
depth (m)
depth_sample (Depth, meters)
temperature (celsius)
pH (Sea Water Ph Reported On Total Scale, pH)
salinity (Sea Water Practical Salinity, practical salinity units (PSU))
Cl (millimoles (mM))
SO4 (millimoles (mM))
DOC (micromoles (uM))
TDN (micromoles (uM))
DON (micromoles (uM))
Nox (micromoles (uM))
NO2 (micromoles (uM))
NH4 (micromoles (uM))
TDP (micromoles (uM))
DOP (micromoles (uM))
PO4 (Mass Concentration Of Phosphate In Sea Water, micromoles (uM))
Si (Mass Concentration Of Silicate In Sea Water, micromoles (uM))
CH4 (micromoles (uM))
MOX (nanomole per liter per day (nmol/L/d))


[Water Column Dissolved and Total Dissolvable Metal Concentrations, Hawaii Ocean Timeseries 2020-2023] - Water column dissolved and total dissolvable metal concentrations from Hawaii Ocean Timeseries (HOT) R/V Kilo Moana cruises at station ALOHA, North Pacific Subtropical Gyre, from December 2020 to November 2023 (Quantifying Iron Turnover in the Upper Ocean via Time-series Measurements at Station ALOHA)

We collected and analyzed water samples for dissolved and total dissolvable trace metal concentration on Hawaii Ocean Time-series (HOT) cruises between December 2020 and November 2023. All samples were collected at Station ALOHA. Samples were collected using a trace metal rosette. Approx. 12 depth samples were collected for each cruise within the upper 350 m of the water column.

Dissolved metal measurements reflect samples filtered through a 0.2 micron filter. Total dissolvable metal measurements represent unfiltered samples. Both sample types were acidified for > 2 months after collection and metals were extracted via chelating resin (Nobias PA-1) and analyzed by inductively coupled plasma mass spectrometry at the University of Hawaii at Manoa using a Thermo Scientific iCAP-TQ mass spectrometer.

This dataset is part of a larger study focused on the cycling of trace metals in the North Pacific Subtropical Gyre, and is embedded within the HOT program.

cdm_data_type = Other
VARIABLES:
Cruise (unitless)
ISO_DateTime_Local (Time, unitless)
time (Time_utc, seconds since 1970-01-01T00:00:00Z)
longitude (degrees_east)
latitude (degrees_north)
depth (m)
dTi (nanomoles per liter (nmol/L))
dTi_qc (unitless)
dMn (nanomoles per liter (nmol/L))
dMn_qc (unitless)
dCo (nanomoles per liter (nmol/L))
dCo_qc (unitless)
dFe (nanomoles per liter (nmol/L))
dFe_qc (unitless)
... (28 more variables)


[Water column geochemical composition] - Geochemical composition of water column samples collected in the Equatorial Pacific during October and November 2020 on R/V Kilo Moana cruise KM2012 (Collaborative Research: How and Why eNd Tracks Ocean Circulation)

Water column, sediment, and pore water samples were collected during R/V Kilo Moana cruise KM2012 in the Equatorial Pacific during October and November 2020. This dataset includes elemental concentrations, Neodymium isotope ratios, pH, and nutrients from the water column samples.

cdm_data_type = Other
VARIABLES:
Station_Number (unitless)
Latitude (degrees_north)
longitude (degrees_east)
Date (unitless)
bottom_depth (meters (m))
sample_name (unitless)
depth (m)
La_pM (picomolar (pmol/L))
Ce_pM (picomolar (pmol/L))
Pr_pM (picomolar (pmol/L))
Nd_pM (picomolar (pmol/L))
Sm_pM (picomolar (pmol/L))
Eu_pM (picomolar (pmol/L))
Gd_pM (picomolar (pmol/L))
Tb_pM (picomolar (pmol/L))
Dy_pM (picomolar (pmol/L))
Ho_pM (picomolar (pmol/L))
Er_pM (picomolar (pmol/L))
Tm_pM (picomolar (pmol/L))
Yb_pM (picomolar (pmol/L))
Lu_pM (picomolar (pmol/L))
Co_nM (nanomolar (nmol/L))
Ni_nM (nanomolar (nmol/L))
Cu_nM (nanomolar (nmol/L))
Zn_nM (nanomolar (nmol/L))
... (11 more variables)


[Water column methane ethylene and nutrients] - Concentration measurements of water column phosphate, nitrate and nitrite, dissolved organic phosphorus, methane, and ethylene from samples collected during the R/V Neil Armstrong cruise AR16 in the western North Atlantic Ocean in May 2017 (Methane, Ethylene, and Dissolved Organic Phosphorus Cycling in the Western North Atlantic Ocean)

Concentration measurements of water column phosphate, nitrate and nitrite, dissolved organic phosphorus, methane, and ethylene from samples collected during the R/V Niel Armstrong cruise AR16 in the western North Atlantic Ocean in May 2017. Seawater was collected from Niskin bottles deployed on a rosette with a CTD.

cdm_data_type = Other
VARIABLES:
Cruise (unitless)
Station (unitless)
Cast (unitless)
latitude (degrees_north)
longitude (degrees_east)
time (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)
depth (m)
CH4 (nanomoles per liter (nmol L-1))
C2H4 (C2 H4, nanomoles per liter (nmol L-1))
NOx (micromoles per liter (umol L-1))
LLN (micromoles per liter (umol L-1))
PO4 (micromoles per liter (umol L-1))
SRP (micromoles per liter (umol L-1))
TDP (micromoles per liter (umol L-1))


[Water Column Nitrate d15N Cocos Ridge Upper 1000m] - Average nitrate d15N values from the upper 1000 meters of the water column at four stations sampled in the Eastern Tropical North Pacific on R/V Sally Ride cruise SR2113 in December 2021 (Collaborative Research: New approaches to study calcium carbonate dissolution on the sea floor and its impact on paleo-proxy interpretations)

We report nitrate isotope data at four stations (CR01, CR02, CR03, and CR05) in the Eastern Tropical North Pacific (ETNP). The cruise (R/V Sally Ride SR2113) occupied these four stations near the Cocos Ridge between 6.8 to 5.3 degrees North latitude and 86.6 to 88.26 degrees West longitude. Sampling occurred between December 2-14, 2021. A 24-bottle Niskin rosette and CTD were used to collect 30-milliliter (mL) water samples that were later analyzed using the denitrifier method. The data were collected by Kameko Landry in the Stable Isotope Biogeochemistry Laboratory at Boston College.

cdm_data_type = Other
VARIABLES:
Station_ID (unitless)
depth (Depth_m, m)
WC_NO3 (micromoles per kilogram (umol/kg))
WC_d15N (permille vs air)
WC_d15N_1sd (permille vs air)
Latitude (degrees_east)
longitude (degrees_east)
Date (unitless)


[Water column Th-234 activities] - Water column Th-234 activities from 4-liter water samples at the Porcupine Abyssal Plain Sustained Observatory (PAP-SO) site in the Northeast Atlantic Ocean during RRS Discovery cruise DY077 in April of 2017 (Collaborative Research:   Are all traps created equal?  A multi-method assessment of the collection and detection of sinking particles in the ocean)

Water column Th-234 activities from 4-liter water samples at the Porcupine Abyssal Plain Sustained Observatory (PAP-SO) site in the Northeast Atlantic Ocean during RRS Discovery cruise DY077 in April of 2017.

cdm_data_type = Other
VARIABLES:
deployment (unitless)
station (unitless)
cast (unitless)
bottle (unitless)
depth (m)
latitude (degrees_north)
longitude (degrees_east)
date (unitless)
time2 (Time, unitless)
time (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)
U238_tot (disintegration per minute per liter (dpm/L))
U238_tot_err (disintegration per minute per liter (dpm/L))
Th234_tot (disintegration per minute per liter (dpm/L))
Th234_tot_err (disintegration per minute per liter (dpm/L))


[Water Mass Fractions - 160 yrs] - The fraction of water last ventilated in a given region in a time less than or equal to 160 years ago based on samples collected from R/V Knorr cruises KN199-04 and KN204-01 during 2010-2011 (U.S. GEOTRACES North Atlantic Transect)

Water mass fractions and ages calculated from hydrographic and tracer data using a maximum-entropy inversion technique.\r\n\r\nThis dataset contains the fraction of water last ventilated in a given region in a time less than or equal to 160 years ago as well as the corresponding ensemble standard deviations.

cdm_data_type = Other
VARIABLES:
LBIR_Fraction (unitless (fraction))
LBIR_Fraction_Uncert (unitless (fraction))
AONG_Fraction (unitless (fraction))
AONG_Fraction_Uncert (unitless (fraction))
SPNA_Fraction (unitless (fraction))
SPNA_Fraction_Uncert (unitless (fraction))
STNA_Fraction (unitless (fraction))
STNA_Fraction_Uncert (unitless (fraction))
MED_Fraction (unitless (fraction))
MED_Fraction_Uncert (unitless (fraction))
NAAD_Fraction (unitless (fraction))
NAAD_Fraction_Uncert (unitless (fraction))
SAAD_Fraction (unitless (fraction))
SAAD_Fraction_Uncert (unitless (fraction))
OTHER_Fraction (unitless (fraction))
OTHER_Fraction_Uncert (unitless (fraction))
Ideal_Mean_Age (years)
Ideal_Mean_Age_Uncert (years)
depth (m)
latitude (degrees_north)
longitude (degrees_east)
Distance_East (kilometers (km))
Cruise_ID (unitless)
Station_No (unitless)
Cast_No (unitless)
Sample_Bottle (unitless)
Date (unitless)


[Water Mass Fractions - 39 yrs] - The fraction of water last ventilated in a given region in a time less than or equal to 39 years ago based on samples collected from R/V Knorr cruises KN199-04 and KN204-01 during 2010-2011 (U.S. GEOTRACES North Atlantic Transect)

Water mass fractions and ages calculated from hydrographic and tracer data using a maximum-entropy inversion technique.\r\n\r\nThis dataset contains the fraction of water last ventilated in a given region in a time less than or equal to 39 years ago as well as the corresponding ensemble standard deviations.

cdm_data_type = Other
VARIABLES:
LBIR_Fraction (unitless (fraction))
LBIR_Fraction_Uncert (unitless (fraction))
AONG_Fraction (unitless (fraction))
AONG_Fraction_Uncert (unitless (fraction))
SPNA_Fraction (unitless (fraction))
SPNA_Fraction_Uncert (unitless (fraction))
STNA_Fraction (unitless (fraction))
STNA_Fraction_Uncert (unitless (fraction))
MED_Fraction (unitless (fraction))
MED_Fraction_Uncert (unitless (fraction))
NAAD_Fraction (unitless (fraction))
NAAD_Fraction_Uncert (unitless (fraction))
SAAD_Fraction (unitless (fraction))
SAAD_Fraction_Uncert (unitless (fraction))
OTHER_Fraction (unitless (fraction))
OTHER_Fraction_Uncert (unitless (fraction))
Ideal_Mean_Age (years)
Ideal_Mean_Age_Uncert (years)
depth (m)
latitude (degrees_north)
longitude (degrees_east)
Distance_East (kilometers (km))
Cruise_ID (unitless)
Station_No (unitless)
Cast_No (unitless)
Sample_Bottle (unitless)
Date (unitless)


[Water Mass Fractions - Ages] - Mean ventilation age reported for 7 regions of the Atlantic based on samples collected from R/V Knorr cruises KN199-04 and KN204-01 during 2010-2011 (U.S. GEOTRACES North Atlantic Transect)

Water mass fractions and ages calculated from hydrographic and tracer data using a maximum-entropy inversion technique.\r\n\r\nThis dataset contains the fraction of water last ventilated in a given region in a time less than or equal to 39 years ago as well as the corresponding ensemble standard deviations.

cdm_data_type = Other
VARIABLES:
LBIR_Age (years)
LBIR_Age_Uncert (years)
AONG_Age (years)
AONG_Age_Uncert (years)
SPNA_Age (years)
SPNA_Age_Uncert (years)
STNA_Age (years)
STNA_Age_Uncert (years)
MED_Age (years)
MED_Age_Uncert (years)
NAAD_Age (years)
NAAD_Age_Uncert (years)
SAAD_Age (years)
SAAD_Age_Uncert (years)
OTHER_Age (years)
OTHER_Age_Uncert (years)
Ideal_Mean_Age (years)
Ideal_Mean_Age_Uncert (years)
depth (m)
latitude (degrees_north)
longitude (degrees_east)
Distance_East (kilometers (km))
Cruise_ID (unitless)
Station_No (unitless)
Cast_No (unitless)
Sample_Bottle (unitless)
Date (unitless)


[Water Mass Fractions - All Years] - The fraction of water last ventilated in a given region regardless of the time elapsed since ventilation (in practice, younger than 4000 years) based on samples collected from R/V Knorr cruises KN199-04 and KN204-01 during 2010-2011 (U.S. GEOTRACES North Atlantic Transect)

Water mass fractions and ages calculated from hydrographic and tracer data using a maximum-entropy inversion technique.\r\n\r\nThis dataset contains the fraction of water last ventilated in a given region regardless of the time elapsed since ventilation (in practice, younger than 4000 years) as well as the corresponding ensemble standard deviations.

cdm_data_type = Other
VARIABLES:
LBIR_Fraction (unitless (fraction))
LBIR_Fraction_Uncert (unitless (fraction))
AONG_Fraction (unitless (fraction))
AONG_Fraction_Uncert (unitless (fraction))
SPNA_Fraction (unitless (fraction))
SPNA_Fraction_Uncert (unitless (fraction))
STNA_Fraction (unitless (fraction))
STNA_Fraction_Uncert (unitless (fraction))
MED_Fraction (unitless (fraction))
MED_Fraction_Uncert (unitless (fraction))
NAAD_Fraction (unitless (fraction))
NAAD_Fraction_Uncert (unitless (fraction))
SAAD_Fraction (unitless (fraction))
SAAD_Fraction_Uncert (unitless (fraction))
OTHER_Fraction (unitless (fraction))
OTHER_Fraction_Uncert (unitless (fraction))
Ideal_Mean_Age (years)
Ideal_Mean_Age_Uncert (years)
depth (m)
latitude (degrees_north)
longitude (degrees_east)
Distance_East (kilometers (km))
Cruise_ID (unitless)
Station_No (unitless)
Cast_No (unitless)
Sample_Bottle (unitless)
Date (unitless)


[Water temperature at coral reefs in Palau] - Water temperature measured at six coral reefs sites in Palau from 2021 to 2023 (Collaborative Research: How do selection, plasticity, and dispersal interact to determine coral success in warmer and more variable environments?)

Water temperature was measured at six coral reef sites in Palau from 2021 to 2023. Loggers (Hobo Tidbit) were attached to threaded rods embedded in the reef using zip ties. Water temperature was measured every 30 minutes.

cdm_data_type = Other
VARIABLES:
ISO_DateTime_Local (unitless)
time (Iso_datetime_utc, seconds since 1970-01-01T00:00:00Z)
Site (unitless)
Latitude (degrees_north)
longitude (degrees_east)
Temperature (degrees Celsius)


[Water temperature data] - Water temperature data from stable isotope labeling experiments conducted from 2012. (Eutrophication Effects on Sediment Metabolism and Benthic Algal-bacterial Coupling: An Application of Novel Techniques in a LTER Estuary)

Water temperature data from stable isotope labeling experiments conducted from 2012.

cdm_data_type = Other
VARIABLES:
month (unitless)
date (unitless)
time (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)
time2 (Time, unitless)
sampleID (Sample ID, unitless)
bucket (unitless)
temp (Temperature, celsius)
lntemp (celsius)


[Water temperature for Palau corals] - Water temperature records for Acropora hyacinthus coral colonies located in either patch or fore reefs of the Palau Archipeglo from November 2017 to January 2020 (Predicting the global location of heat tolerant corals: Palau patch reefs as a general model)

Water temperature records for Acropora hyacinthus coral colonies located in either patch or fore reefs of the Palau Archipeglo from November 2017 to July 2018.

cdm_data_type = Other
VARIABLES:
Collection_date_time (unitless)
time (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)
Temperature (degrees Celsius)
Colony_tag (unitless)
latitude (degrees_north)
longitude (degrees_east)
Reef_number (unitless)
Reef_type (unitless)
Species (unitless)


[Water temperature] - Water temperature during coral calcification experiments conducted on Oahu, Hawaii from November of 2014 to November of 2015 (Will corals recover from bleaching under ocean acidification conditions?)

Water temperature during coral calcification experiments conducted on Oahu, Hawaii from November of 2014 to November of 2015

cdm_data_type = Other
VARIABLES:
date_HST (unitless)
time_HST (unitless)
time (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)
t1 (degrees Celsius)
t2 (degrees Celsius)
t3 (degrees Celsius)
t4 (degrees Celsius)
t5 (degrees Celsius)
t6 (degrees Celsius)
t7 (degrees Celsius)
t8 (degrees Celsius)


[WBTS Copepod abundance per m2] - Abundance of copepods in Wilkinson Basin Time Series Station, Gulf of Maine, 2005-2016 (Collaborative Research: Mechanisms supporting persistence of a key plankton species during climate change on the Northwest Atlantic continental shelf)

copepod abundance WBTS 2005-2016

cdm_data_type = Other
VARIABLES:
Date (seconds since 1970-01-01T00:00:00Z)
NET_depth
Water_Depth
Num_Cfin_Id_subsample
Nauplii
CI
CII
CIII
CIV
CV
Female
Male
Calanus_finmarchicus
Calanus_hyperboreus
Paraeucheata_spp
Pseudocalanus_spp
Centropages_spp
Metridia_spp
Oithona_spp
Microcalanus_spp
Clauso_Para_Parvo_spp
Temora_spp
other_copepod_spp


[Weekly Calcification Rates] - Weekly coral calcification rates in the CO2 manipulation experiment conducted on Porites corals from Palau (Toward Predicting the Impact of Ocean Acidification on Net Calcification by a Broad Range of Coral Reef Ecosystems: Identifying Patterns and Underlying Causes)

Weekly coral calcification rates in the CO2 manipulation experiment conducted on Porites corals from Palau.

cdm_data_type = Other
VARIABLES:
week (unitless)
CO2_treatment (unitless)
reef_omega_AR (unitless)
calc_rate (milligrams per square centimeter per week (mg/cm2/wk))
calc_rate_se (milligrams per square centimeter per week (mg/cm2/wk))


[Weekly Surface Water Samples] - Weekly surface water samples from Newport Pier, CA collected between 11 January 2012 and 3 November 2023 (Biological Controls on the Ocean C:N:P ratios)

Weekly surface water samples from Newport Pier, CA, were collected between 11 January 2012 and 3 November 2023.

This project is a continuation of a time series with weekly surface water sampling from the Microbes in the Coastal Region of Orange County (MICRO) time series station at Newport Pier (33°36.37'N, 117°55.87'W). We measured dissolved nitrate and phosphate in the water, as well as particulate organic carbon, nitrogen and phosphorus.

These data were published in Fagan et al. (2019), Larkin et al. (2020), and a pending publication, Larkin et al. (in press).

cdm_data_type = Other
VARIABLES:
Date (unitless)
NO3_1 (micromolar (uM))
NO3_2 (micromolar (uM))
NO3_3 (micromolar (uM))
NO3_4 (micromolar (uM))
NO3_5 (micromolar (uM))
NO3_6 (micromolar (uM))
NO3_Avg (micromolar (uM))
SRP_1 (micromolar (uM))
SRP_2 (micromolar (uM))
SRP_3 (micromolar (uM))
SRP_4 (micromolar (uM))
SRP_5 (micromolar (uM))
SRP_6 (micromolar (uM))
SRP_Avg (micromolar (uM))
POP_1 (micromolar (uM))
POP_2 (micromolar (uM))
POP_3 (micromolar (uM))
... (31 more variables)


[Western Pacific Aerosol Data] - Inorganic nitrogen content; and nitrate, ammonium, and oxygen isotope composition of atmospheric particulates collected on Changdao Island, China from September 22, 2019 to September 5, 2020 (Collaborative Research: Characterization of Reactive Nitrogen in The North Pacific Atmosphere)

These data include the content of total nitrogen, nitrate isotope (15N), ammonium isotope (15N), and oxygen isotope (17O and 18O) composition of atmospheric particulates collected on Changdao Island, China. Aerosol sampling was conducted from September 22, 2019 to September 5, 2020. A high-volume aerosol sampler (model 2031, Qingdao Laoying Environmental Technology Co) operating at 1.0 m3 min -1 with 25 × 20 cm filters was used. Recognizing the deposition of atmospheric particulates has the potential to understanding the important role of atmospheric deposition to the nitrogen cycle and biogeochemistry in the ocean. These data assess the contribution of atmospheric deposition to inorganic nitrogen and were collected by Dr. Ren Pen (pren@qnlm.ac) at the Ocean University of China.

cdm_data_type = Other
VARIABLES:
CollectionTime (unitless)
latitude (degrees_north)
longitude (degrees_east)
CollectionPeriod_Hrs (hours)
TotalAirVolume_m3 (cubic meters (m3))
ParticleWeight_g (grams (g))
AmmoniumConcentration_ugPerm3 (micrograms per cubic meter (µg/m3))
NitrateConcentration_ugPerm3 (micrograms per cubic meter (µg/m3))
NitriteConcentration_ugPerm3 (micrograms per cubic meter (µg/m3))
Delta15N_Nitrate (parts per thousand (permil) (‰))
Delta15N_Ammonium (parts per thousand (permil) (‰))
Delta18Oxygen_Nitrate (parts per thousand (permil) (‰))
Delta17O_Nitrate (parts per thousand (permil) (‰))


[Western Pacific Cruise Data] - Total organic carbon, total nitrogen content; and nitrate, ammonium and oxygen isotope composition of atmospheric particulates collected aboard R/V Dong Fang Hong-3 in the western North Pacific from October 31 to December 1, 2019. (Collaborative Research: Characterization of Reactive Nitrogen in The North Pacific Atmosphere)

These data include the content of total organic carbon content, carbon isotope (13C and 14C), total nitrogen, nitrate isotope (15N), ammonium isotope (15N), and oxygen isotope (17O and 18O) composition of atmospheric particulates collected during western North Pacific Cruise. On-ship aerosol sampling was conducted on the R/V Dong Fang Hong-3 during a cruise to the western North Pacific from October 31 to December 1, 2019. Instruments used were two portable aerosol particle samplers (model 2030, Qingdao Laoying Environmental Technology Co.) with a filter size of 9 cm O.D. Recognizing the deposition of atmospheric particulates has the potential to understanding the important role of atmospheric deposition to the nitrogen cycle and biogeochemistry in the ocean. These data assess the contribution of atmospheric deposition to inorganic nitrogen and were collected by Chief Scientist Zaohui, Chen (chenzhaohui@ouc.edu.cn) at the Ocean University of China.

cdm_data_type = Other
VARIABLES:
Sample_Number (unitless)
Date (unitless)
Start_time (unitless)
time (Start_datetime_utc, seconds since 1970-01-01T00:00:00Z)
Sampling_period_h (hours (hrs))
latitude (degrees_north)
longitude (degrees_east)
Duplicate (unitless)
Total_Air_Volume_L (liter (L))
TotalAirVolume_m3 (cubmic meters (m3))
ParticleWeight_mg (miligrams (mg))
TOC_percent (percentage (%))
TN_percent (percentage (%))
C_N_Ratio (unitless)
Carbon13_12_Ratio (parts per thousand (permil) (‰))
Delta15N_Nitrate (parts per thousand (permil) (‰))
Delta15N_NH4 (parts per thousand (permil) (‰))
Delta18Oxygen_Nitrate (parts per thousand (permil) (‰))
Delta17O_Nitrate (parts per thousand (permil) (‰))


[Western Pacific Hawaii Aerosol Data] - Aerosol composition data of ion concentrations (ammonium, nitrate, nitrite, sodium, chloride, magnesium, calcium, potassium, sulfate); and ammonium and nitrate isotope (15N) of atmospheric particulates collected in Hawaii from March 2021 to August 2022 (Collaborative Research: Characterization of Reactive Nitrogen in The North Pacific Atmosphere)

These data include aerosol composition data of ion concentrations (ammonium, nitrate, nitrite, sodium, chloride, magnesium, calcium, potassium, sulfate), and ammonium isotope (15N) of atmospheric particulates collected on Oahu, Hawaii. Aerosol sampling was conducted from March 2021 to June 2022 and collected roughly every seven days. A high-volume aerosol sampler operating at 1,200 L min-1 with 25 × 20 cm filters was used. Recognizing the deposition of atmospheric particulates has the potential to understanding the important role of atmospheric deposition to the nitrogen cycle and biogeochemistry in the ocean. These data assess the contribution of atmospheric deposition to inorganic nitrogen and were collected by Mitchell Pinkerton at the Ocean University of Hawaii.

cdm_data_type = Other
VARIABLES:
Sample_ID (unitless)
Date (unitless)
Collection_Location (units)
latitude (degrees_north)
longitude (degrees_east)
CollectionPeriod_Hrs (hours (hrs))
TotalAirVolume_m3 (Liter (L))
ParticleWeight_g (milligram (mg))
AmmoniumConcentration_ugPerm3 (micrograms per cubic meter (µg/m3))
NitrateConcentration_ugPerm3 (micrograms per cubic meter (µg/m3))
SodiumConcentration_ugPerm3 (micrograms per cubic meter (µg/m3))
PotassiumConcentration_ugPerm3 (micrograms per cubic meter (µg/m3))
MagnesiumConcentration_ugPerm3 (micrograms per cubic meter (µg/m3))
CalciumConcentration_ugPerm3 (micrograms per cubic meter (µg/m3))
ChlorideConcentration_ugPerm3 (micrograms per cubic meter (µg/m3))
SulfateConcentration_ugPerm3 (micrograms per cubic meter (µg/m3))
Delta15N_Ammonium (parts per thousand (permil) (‰))
Delta15N_Nitrate (parts per thousand (permil) (‰))


[Western Pacific Precipitation Data] - Total organic carbon and total nitrogen content; and nitrogen and oxygen isotope  composition of precipitation collected at Qindao, Yantai and Changdao Island, China from May 17, 2019 to August 31, 2020. (Collaborative Research: Characterization of Reactive Nitrogen in The North Pacific Atmosphere)

These data include the content of total organic carbon content and total nitrogen, and nitrogen (15N) and oxygen (17O and 18O) isotope composition of precipitation collected at three fixed locations: Qindao (121°28'15" E, 31°37'21" N), Yantai (121°27'40" E, 37°31'20" N), and Changdao Island (120°45'20" E, 38°10'23" N) in China. the rainwater samples collected on the Changdao Island were via an automatic rainwater collector (Model XHARS30C, Jinshui Huayu Scientific Inc. Weifang, China), and all other rainwaters collected in Yantai and Qindao were via stainless buckets from May 17, 2019 to August 31, 2020. Recognizing the deposition from precipitation has the potential to understanding the important role of atmospheric deposition to the nitrogen cycle and biogeochemistry in the ocean. These data assess the contribution of atmospheric deposition to organic carbon and were collected by Dr. Ren Pen (pren@qnlm.ac) at the Ocean University of China.

cdm_data_type = Other
VARIABLES:
Date (unitless)
Site (unitless)
longitude (degrees_east)
latitude (degrees_north)
Duplicate (unitless)
AmmoniumConcentration_umolperL (micromoles per lieter (umol / L))
NitrateConcentration_umolperL (micromoles per lieter (umol / L))
NitriteConcentration_umolperL (micromoles per lieter (umol / L))
PhosphateConcentration_umolperL (micromoles per lieter (umol / L))
DissolvedSilicaConcentration_umolperL (micromoles per lieter (umol / L))
DINConcentration_umolperL (micromoles per lieter (umol / L))
TDNConcentration_umolperL (micromoles per lieter (umol / L))
DONConcentration_umolperL (micromoles per lieter (umol / L))
DOCConcentration_umolperL (micromoles per lieter (umol / L))
Delta15N_Nitrate (parts per thousand (permil) (‰))
Delta15N_Ammonium (parts per thousand (permil) (‰))
Delta18Oxygen_Nitrate (parts per thousand (permil) (‰))
Delta17Oxygen_Nitrate (parts per thousand (permil) (‰))


[Wetz-783256-Discrete] - Discrete hydrographic measurements - Effects of Hurricane Harvey on Estuarine Water Quality in the Lavaca-Colorado, Guadalupe and Nueces Estuaries between August 2017 and January 2018. (RAPID: Capturing the Signature of Hurricane Harvey on Texas Coastal Lagoons)

Discrete hydrographic measurements of Lavaca-Colorado, Guadalupe and Nueces Estuaries on the Texas coast between August 2017 and January 2018.

cdm_data_type = Other
VARIABLES:
Date (unitless)
latitude (degrees_north)
longitude (degrees_east)
Times (unitless)
Site (unitless)
Replicate (unitless)
depth (m)
Chlorophyll (Concentration Of Chlorophyll In Sea Water, migrograms per liter (ug/L))
Conductivity (Sea Water Electrical Conductivity, mircosiemens per centimeter (µS/cm))
Salinity (Sea Water Practical Salinity, unitless)
DO (milligram per liter (mg/L))
DOPct (percentage (%))
pH (Sea Water Ph Reported On Total Scale, pH units)
Temp (Temperature, degrees celcius  (°C))
Secchi (meter (m))
DOC (Micromoles per Liter (umol/L))
TDN (Micromoles per Liter (umol/L))
TOC (Micromoles per Liter (umol/L))
TN (Micromoles per Liter (umol/L))
Ammonium (Mole Concentration Of Ammonium In Sea Water, Micromoles per Liter (umol/L))
N_N (Micromoles per Liter (umol/L))
Nitrite (Mole Concentration Of Nitrite In Sea Water, Micromoles per Liter (umol/L))
ortho_P (Micromoles per Liter (umol/L))
Silicate (Micromoles per Liter (umol/L))
Estuary (unitless)
time (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)


[Wetz-783256-Sonde] - Sonde water quality measurements - Effects of Hurricane Harvey on Estuarine Water Quality in the Guadalupe Estuary between August 2017 and December 2017. (RAPID: Capturing the Signature of Hurricane Harvey on Texas Coastal Lagoons)

Bottom and surface water quality sonde data of the Guadalupe Estuary site (Texas) between August 2017 and December 2017.

cdm_data_type = Other
VARIABLES:
Date (unitless)
time2 (Time, unitless)
latitude (degrees_north)
longitude (degrees_east)
Cond (micro siemens per cm (uS/cm))
Sal (unitless)
DOPct (percent (%))
DO (milligram per liter (mg/L))
pH (Sea Water Ph Reported On Total Scale, pH units)
Temp (Temperature, degrees Celsius (°C))
Sonde_WaterColumn_Location (Sonde Water Column Location, unitless)
time (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)


[whales aerial sightings] - Right Whales aerial sightings in Cape Cod Bay and adjacent waters from the R/V Shearwater NEC-MB2002-1, 2002 (NEC-CoopRes project) (Northeast Consortium: Cooperative Research)

Right Whales aerial sightings in Cape Cod Bay and adjacent waters from the R/V Shearwater NEC-MB2002-1, 2002 (Northeast Consortium Cooperative Research project).

cdm_data_type = Other
VARIABLES:
region
survey_id
year
month_local
day_local
yrday_local
duration (hours)
distance_nm (nautical miles)
tracks_completed
taxon
count
comments


[whales aerial tracklines] - Right Whales aerial surveillance tracklines over Cape Cod Bay and adjacent waters from the R/V Shearwater NEC-MB2002-1, 2002 (NEC-CoopRes project) (Northeast Consortium: Cooperative Research)

Right Whales aerial surveillance tracklines over Cape Cod Bay and adjacent waters from the R/V Shearwater NEC-MB2002-1, 2002 (Northeast Consortium Cooperative Research project).

cdm_data_type = Other
VARIABLES:
region
region_line
line
year
date_local
latitude (degrees_north)
lat_2 (Latitude, decimal degrees)
longitude (degrees_east)
lon_2 (Longitude, decimal degrees)
distance_nm (nm)
comments


[whales historical id's] - Confirmed right whale identifications in Cape Cod Bay and adjacent waters and sighting histories, from the R/V Shearwater NEC-MB2002-1 (1998-2002), and historical records from 1980 (NEC-CoopRes project) (Northeast Consortium: Cooperative Research)

Confirmed right whale identifications in Cape Cod Bay and adjacent waters and sighting histories, from the R/V Shearwater NEC-MB2002-1 (1998-2002), and historical records from 1980 (Northeast Consortium Cooperative Research project).

cdm_data_type = Other
VARIABLES:
year
whale_id
sex
region


[whales ship-based sightings] - Marine mammal sightings and hours at sea during vessel-based habitat sampling cruises of Cape Cod Bay and adjacent waters from the R/V Shearwater NEC-MB2002-1, 2002 (NEC-CoopRes project) (Northeast Consortium: Cooperative Research)

Marine mammal sightings and hours at sea during vessel-based habitat sampling cruises of Cape Cod Bay and adjacent waters from the R/V Shearwater NEC-MB2002-1, 2002 (Northeast Consortium Cooperative Research project).

cdm_data_type = Other
VARIABLES:
region
cruiseid
hrs_at_sea
year
month_local
day_local
yrday_local (unitless)
species
count
comments


[whales_id's_2002] - Confirmed right whale identifications in Cape Cod Bay and adjacent waters from the R/V Shearwater NEC-MB2002-1, 2002 (NEC-CoopRes project) (Northeast Consortium: Cooperative Research)

Confirmed right whale identifications in Cape Cod Bay and adjacent waters from the R/V Shearwater NEC-MB2002-1, 2002 (Northeast Consortium Cooperative Research project).

cdm_data_type = Other
VARIABLES:
region
whale_id
sex (dimensionless)
age (years)
yrday_local
year
month_local
day_local
sighting
comments


[Whelk-Barnacle Predation Experiments] - Results from mesocosm experiments measuring how temperature affects predation rates by whelks on barnacles (The Role of Temperature in Regulating Herbivory and Algal Biomass in Upwelling Systems)

These data contain results from mesocosm experiments measuring how temperature affects predation rates by whelks on barnacles. These results include barnacles eaten and whelk movements under warm and cold conditions. The experiments were done in the Galapagos Science Center in San Cristobal, Galapagos.  Estimates of how temperature modifies activity and predation rates will help understand and predict changes in marine communities under future climate change scenarios.

cdm_data_type = Other
VARIABLES:
Day_of_Week (unitless)
ISO_DateTime_Local (unitless)
time (Iso_datetime_utc, seconds since 1970-01-01T00:00:00Z)
Aquarium (unitless)
Treatment (unitless)
Temperature (degrees Celsius)
Position_of_Whelk (unitless)
WhelkPosition (unitless)
DeadControl (unitless)
DeadPrey (unitless)
PreyEaten (unitless)
Note (unitless)


[Whitespotted eagle ray (Aetobatus narinari) tagging and biologging data in Harrington Sound, Bermuda in October of 2022] - Whitespotted eagle ray (Aetobatus narinari) tagging and biologging data in Harrington Sound, Bermuda in October of 2022 (Breaking ground with underwater sound - unraveling elusive predator-prey interactions in marine benthic communities using novel technological approaches)

The following dataset includes information from whitespotted eagle rays (Aetobatus narinari) collected in Harrington Sound and Flatts Inlet, Bermuda, for tagging experiments to examine retention and behavior of individual animals fitted with CATS-CAM biologging tags. Rays were spotted visually from a moving vessel and collected via a knotted seine net by encircling the animal and entangling it. Rays were brought aboard for measurements, photographs and tagging (Passive Integrated Transponder and CATS-CAM) and kept in a small plastic pool with ambient seawater. Once procedures were complete, rays were released on site, or brought to the Bermuda Aquarium for further examination.

cdm_data_type = Other
VARIABLES:
Catch_ID (unitless)
Date (unitless)
latitude (degrees_north)
longitude (degrees_east)
Animal_ID (unitless)
DW (centimeter (cm))
SL (centimeter (cm))
TL (centimeter (cm))
Sex (unitless)
Mature (unitless)
PIT (unitless)
CATS_CAM_ID (unitless)


[Whole genome sequence data for Pisaster ochraceus] - Whole genome sequence data for Pisaster ochranceus samples collected from the Pacific coast of North America from July 2004 to May 2018 (Collaborative Proposal: Selection and Genetic Succession in the Intertidal -- Population Genomics of Pisaster ochraceus During a Wasting Disease Outbreak and its Aftermath)

This dataset includes collection and accession information for whole genome sequence (WGS) data from 65 Pisaster ochraceus (ochre sea star) collected across latitudes ranging from SE Alaska to southern California. The sequence data have been deposited into NCBI SRA archive under BioProject PRJNA1117092 and will be publicly available on 2025-08-01. These data are used to evaluate the population genomic diversity and divergence of spatially and environmentally separated populations of Pisaster ochraceus.

cdm_data_type = Other
VARIABLES:
sample_name (unitless)
bioproject_accession (unitless)
bioproject_ncbi (unitless)
assay_type (unitless)
organism (unitless)
isolation_source (unitless)
collection_date (unitless)
iso_collection_date (unitless)
geo_loc_name (unitless)
latitude (degrees_north)
longitude (degrees_east)
tissue (unitless)
biomaterial_provider (unitless)
collected_by (unitless)
host_tissue_sampled (unitless)


[Whole Genome Sequencing of Eelgrass Bodega and Tomales Bay] - Sample collection information and sequence accessions at the National Center for Biotechnology Information (NCBI) for whole genome sequencing of eelgrass (Zostera marina) collected at Bodega and Tomales Bay, CA, USA from July to September 2019 (Using genomics to link traits to ecosystem function in the eelgrass Zostera marina)

This dataset includes sample collection information and sequence accessions at the National Center for Biotechnology Information (NCBI) for whole genome sequencing of eelgrass (Zostera marina) collected at Bodega and Tomales Bay, California, USA from July and September of 2019. Sequence Read Archive (SRA) Experiments and BioSamples can be accessed from the NCBI BioProject PRJNA887384 (https://www.ncbi.nlm.nih.gov/bioproject/PRJNA887384/).

Results summary as described in Scheibelhut, et al. (2023): We examine genomic signals of selection in the eelgrass Zostera marina across temperature gradients in adjacent embayments. Although we find many genomic regions with signals of selection within each bay there is very little overlap in signals of selection at the SNP level, despite most polymorphisms being shared across bays. We do find overlap at the gene level, potentially suggesting multiple mutational pathways to the same phenotype. Using polygenic models we find that some sets of candidate SNPs are able to predict temperature across both bays, suggesting that small but parallel shifts in allele frequencies may be missed by independent genome scans. Together, these results highlight the continuous rather than binary nature of parallel evolution in polygenic traits and the complexity of evolutionary predictability.

cdm_data_type = Other
VARIABLES:
accession (unitless)
sample_name (unitless)
bioproject_accession (unitless)
Site (unitless)
organism (unitless)
collection_date (unitless)
isolation_source (unitless)
latitude (degrees_north)
longitude (degrees_east)


[Wild copepod pool-seq data] - Pool-seq data from wild populations of copepods in the North Sea from May 2014 (Evolutionary genomics of a copepod project) (Evolutionary Responses to Global Changes in Salinity and Temperature)

This dataset was generated from studies of wild populations of Eurytemora affinis (E. affinis). Copepod populations were collected from three locations in the North Sea using bongo nets with 100 micrometer (μm) mesh and stored in RNAlater. Sampling locations included two freshwater lakes and one brackish estuary. Individual copepods (100 individuals, 50:50 male:female) were pooled and their DNA was extracted. Paired-end whole-genome sequencing libraries were prepared using the Illumina Nextera DNA kit (Illumina, Inc.) and sequenced on three lanes of an Illumina HiSeq 2000 sequencer, generating an average of approximately 158 million paired-end (100 bp) reads per pool. These data have been deposited in the National Center for Biotechnology Information (NCBI) under BioProject number PRJNA923656.

cdm_data_type = Other
VARIABLES:
Location (unitless)
Collection_Date (unitless)
Sample_Code (unitless)
Sample_Salinity (Practical salinity units (PSU))
Sample_Temperature (degrees Celsius)
Latitude (degrees_north)
Longitude (degrees_east)
BioSample (unitless)
SRA_Run (unitless)


[Winam Gulf Metagenomic Time Series] - Metagenomic Time Series of Winam Gulf, Lake Victoria from 2022-2023 (ASI Lake Victoria project) (IRES Track II: Advanced studies institute on water quality and harmful algal blooms in Lake Victoria)

Compared to the other "Great Lakes" (Laurentian Great Lakes of North America and Lake Baikal of Russia) the African Great Lakes have remained widely unstudied. This serves as a substantial research gap within the limnological literature given the African Great Lakes contribute approximately 25% of all global, accessible freshwater.  Lake Victoria of the African Great Lakes is notable for its large size - serving as the second largest freshwater lake in the world by surface area. Yet, Lake Victoria is also known for the prolific year-long cyanobacterial blooms that occur throughout her waters such as the Winam Gulf. These blooms are fueled by intense agricultural and anthropogenic development much like other freshwater harmful algal blooms. However, unlike other freshwater blooms such as those occurring in Lake Erie and Lake Taihhu - these cyanobacterial blooms have remained widely uncharacterized (especially using molecular techniques).

The central study area is the Winam Gulf of Lake Victoria, Kenya. This is a relatively shallow, hypereutrophic system that has various rivers serving as nutrient loading sources (such as the Sondu River). This dataset also contains opportunistic samples collected from a variety of riverine systems and Lakes Simbi and Naivasha.

Here, we present the biological, chemical and physical data corresponding to a two year metagenomic time series of the Winam Gulf, Lake Victoria. We further present the physiochemical data of eight outgroup samples including adjacent riverine systems and Lakes Simbi and Naivasha.

cdm_data_type = Other
VARIABLES:
Library_ID (unitless)
Site_Name (unitless)
Replicate_id (unitless)
SampleID (unitless)
StudyID (unitless)
Sample_type (unitless)
Lake_or_river (unitless)
latitude (degrees_north)
... (40 more variables)


[wind_stress] - Wind Stress from GLOBEC Mooring ST1, the Nantucket Lightship, and buoys 44005, 44003, 44008, 44011, and 44018 in the Gulf of Maine and Georges Bank from 1975-2007 (GB project) (U.S. GLOBEC Georges Bank)

Wind Stress from GLOBEC Mooring ST1, the Nantucket Lightship, and buoys 44005, 44003, 44008, 44011, and 44018 in the Gulf of Maine and Georges Bank from 1975-2007

cdm_data_type = Other
VARIABLES:
mooring
year
yrday0_gmt (decimal yearday)
taux (Surface Downward Eastward Stress, pascals)
tauy (Surface Downward Northward Stress, pascals)


[Winter survey data from Lake Erie from Dec 2022 to Mar 2023] - Winter survey data from Lake Erie from Dec 2022 to Mar 2023 (Lake Erie Center for Fresh Waters and Human Health)

This dataset includes winter survey data from Lake Erie collected on USCGC Neah Bay, CCGS Griffon, and CCGS Samuel Risley from December 2022 to March 2023. The survey includes environmental observations, physico-chemical data, chlorophyll, total and dissolved nutrients. The Lake Erie Center for Fresh Waters and Human Health is a five-year, multi-institutional effort aimed at understanding the environmental factors and ongoing changes that influence the growth and toxicity of cyanobacterial harmful algal blooms (cHABs) in Lake Erie.

cdm_data_type = Other
VARIABLES:
Station (unitless)
Deployment (unitless)
Alt_Station (unitless)
Lake (unitless)
Date (unitless)
Time_EST (unitless)
time (Iso_datetime_utc, seconds since 1970-01-01T00:00:00Z)
latitude (degrees_north)
longitude (Long, degrees_east)
Water_Depth (meters (m))
Ice_Cover (percent (%))
Snow_Cover (percent (%))
Ice_Type (unitless)
Ice_Thickness (inches (in))
Air_Temp (Degrees Celsius)
Water_Temp (Degrees Celsius)
DO (microgram per liter (µg L-1))
DO_percent (percent (%))
Cond (microsiemens per centimeter (uS/cm))
pH (unitless (pH scale))
Sechhi (meters (m))
Baro_Press (Hg)
... (16 more variables)


[Winter temperature data from northeast Pacific embayments] - Winter temperature data from loggers placed in shallow subtidal areas in the northeast Pacific from Oct 2019 to Jul 2024 (Collaborative Research: Tracking fine-scale selection to temperature at the invasion front of a highly dispersive marine predator)

Dataset includes winter temperature logger data for a suite of embayments in the northeast Pacific. Data were collected as part of an NSF-funded project on invasive European green crab adaptation; loggers were placed in the shallow subtidal in areas determined by Washington Sea Grant's Crab Team to be good environments for green crabs. Loggers were placed by multiple collaborators without a fully standardized approach; metadata are incomplete but include all available information. Loggers used were iButtons and HOBO pendant loggers. Two loggers were placed at each site in the shallow subtidal with the goal that they were always submerged in water while deployed (i.e., not emersed). Logging frequency depended on the monitor type; iButtons captured water temperatures every 2.15 hours, and HOBO loggers recorded water temperature every 30 minutes over the winter. Deployment duration varied between years and sites, but typically ran from October - April.

cdm_data_type = Other
VARIABLES:
time (Iso_datetime_utc, seconds since 1970-01-01T00:00:00Z)
Local_DateTime (unitless)
Temperature (degrees Celsius)
File_Name (unitless)
SiteNumber (unitless)
SiteName (unitless)
HabType (unitless)
Type (unitless)
Model (unitless)
SerialNumber (unitless)
LoggerStartDate (unitless)
DeploymentDate (unitless)
DeploymentTime (unitless)
DeploymentDateTime (unitless)
latitude (degrees_north)
longitude (degrees_east)
DeployedBy (unitless)
RetrievalDate (unitless)
AnchorType (unitless)
TimeVar (seconds)
Notes (unitless)


[Winter to spring transition in a fjord in the Gulf of Alaska - chlorophyll a and flow cytometry data] - Chlorophyll a and flow cytometry data from bi-weekly vertical profiles in Resurrection Bay, AK from January to March of 2023 from bi-weekly vertical profiles in Resurrection Bay, AK from January to March of 2023 (Collaborative Research: Zooplankton restarts in a high-latitude marine ecosystem: species-specific recruitment and development in early spring)

The Gulf of Alaska is a highly seasonal environment that is characterized by an order-of-magnitude increase in copepod biomass in the photic zone between winter and spring. The study focused on copepod recruitment to characterize species-specific naupliar production. Concurrent environmental monitoring included measurements of chlorophyll α and flow cytometry as indicators of prey field. Bi-weekly vertical profiles of temperature, salinity and fluorescence were recorded at an established station (RES2.5) in Resurrection Bay, AK. Discrete water samples were obtained for size-fractionated chlorophyll α samples and cell counts using flow cytometry. The water column was stratified by salinity with the lowest salinities recorded in the surface layer. A moderate increase in chlorophyll α concentrations occurred during March prior to the spring phytoplankton bloom.

cdm_data_type = Other
VARIABLES:
cruise (unitless)
date (unitless)
station (unitless)
latitude (degrees_north)
longitude (degrees_east)
cast (unitless)
niskin (unitless)
depth (m)
chla_gt_20 (Micrograms per liter (ug/L))
chla_lt_20 (Micrograms per liter (ug/L))
chla_total (Micrograms per liter (ug/L))
phaeo_gt_20 (Micrograms per liter (ug/L))
phaeo_lt_20 (Micrograms per liter (ug/L))
phaeo_total (Micrograms per liter (ug/L))
hbact (Number per milliliter (#/mL))
syn (Number per milliliter (#/mL))
peuk (Number per milliliter (#/mL))


[Winter to spring transition in a fjord in the Gulf of Alaska - microscopy data] - Microplankton microscopy and biovolume analysis from Lugol's samples collected in Resurrection Bay, AK from January to March of 2023 (Collaborative Research: Zooplankton restarts in a high-latitude marine ecosystem: species-specific recruitment and development in early spring)

The Gulf of Alaska is a highly seasonal environment characterized by an order-of-magnitude increase in copepod biomass in the photic zone between winter and spring. The study focused on copepod recruitment to characterize species-specific naupliar production. Concurrent environmental monitoring included taxonomic identification of microplankton using microscopy.

cdm_data_type = Other
VARIABLES:
cruise (unitless)
date (unitless)
station (unitless)
latitude (degrees_north)
longitude (degrees_east)
depth (m)
sample_volume (Milliliters (ml))
group (unitless)
taxa (unitless)
cell_count (Integer)
abundance (Cells per milliliter (#/ml))
cell_biovolume (Cubic micrometers (µg^3))
cell_carbon (Picograms carbon (pg))
biomass (Picograms carbon per milliliter (pg/ml))


[Winter to spring transition in a fjord in the northern Gulf of Alaska dataset - CTD data] - CTD (temperature, salinity and fluorescence) from bi-weekly vertical profiles in Resurrection Bay, AK from January to March of 2023 (Collaborative Research: Zooplankton restarts in a high-latitude marine ecosystem: species-specific recruitment and development in early spring)

The Gulf of Alaska is a highly seasonal environment that is characterized by an order-of-magnitude increase in copepod biomass in the photic zone between winter and spring. The study focused on copepod recruitment to characterize species-specific naupliar production. Concurrent environmental monitoring included approximately bi-weekly vertical profiles of temperature, salinity and fluorescence were recorded at an established station (RES2.5) in Resurrection Bay, AK.  Day-trips aboard the R/V Nanuq were conducted approximately bi-weekly in Resurrection Bay, AK during January to March, 2023.

cdm_data_type = Other
VARIABLES:
cruise (unitless)
station (unitless)
date_local (unitless)
start_time_local (unitless)
time (Start_datetime_utc, seconds since 1970-01-01T00:00:00Z)
julianday (unitless)
latitude (degrees_north)
longitude (degrees_east)
binned_pressure (Decibars (dbar))
temperature (Celsius (C))
conductivity (Siemens per meter (S/m))
turbidity (Nephelometric Turbidity Unit (NTU))
fluorescence (Milligrams per cubic meter (mg/m^3))
time_elapsed (Seconds (s))
scan (unitless)
depth (m)
salinity (Practical Salinity Units (PSU))
sigmaT (Kilograms per cubic meter (kg/m^3 ))
descent_rate (Meters per second (m/s))
nbin (unitless)


[Woodfalls (Wood Fall project)] - Woodfalls (Wood Fall project) (The energetic assembly of biological communities: a test with deep-sea woodfalls)

Information for individual wood falls including size and deployment information.

cdm_data_type = Other
VARIABLES:
tag_number (value)
tag_color (green, white, orange, yellow, blue)
experiment (unitless)
rov_dive (unitless)
site (unitless)
deployment_date (unitless)
latitude (degrees_north)
longitude (degrees_east)
depth (m)
deployment_row (value)
deployment_column (value)
wood_type (species)
length (centimeters)
max_diameter (centimeters)
min_diameter (centimeters)
wood_mass_final (kilograms)
notes (unitless)
weight_wood_zip (kilograms)
weight_packet_total_1 (kilograms)
weight_wood_only (kilograms)
weight_wrap_only (kilograms)
weight_zip (kilograms)
zip_tie_length (unitless)
weight_packet_total_2 (kilograms)


[WP2 net metadata - CGoA LTOP] - WP2 net meta data from F/V Great Pacific GP0108, GP0207-01, GP0207-02 in the Coastal Gulf of Alaska, Northeast Pacific from 2001-2002 (NEP project) (U.S. GLOBEC Northeast Pacific)

WP2 net meta data from F/V Great Pacific GP0108, GP0207-01, GP0207-02 in the Coastal Gulf of Alaska, Northeast Pacific from 2001-2002.

cdm_data_type = Other
VARIABLES:
cruiseid (unitless)
year (unitless)
haul_id (dimensionless)
station (dimensionless)
yrday_local (dimensionless)
month_local (unitless)
day_local (unitless)
time_local_start
latitude (degrees_north)
longitude (degrees_east)
distance_start
depth (m)
depth_tow (Depth, meters)
comments


[Wrack Composition and Abundance] - Composition and abundance of macrophyte wrack at six Santa Barbara beaches quantified during surveys conducted from 2015-2017 (Linking nearshore kelp forest dynamics to sandy beach ecosystems)

Composition and abundance of macrophyte wrack at six Santa Barbara beaches quantified during surveys conducted from 2015-2017. Wrack composition and cover were recorded for each of six shore-normal transects of variable length that extended from the lower edge of terrestrial vegetation or the bluff to the lowest intertidal level exposed by swash at each location.

cdm_data_type = Other
VARIABLES:
Site (unitless)
latitude (degrees_north)
longitude (degrees_east)
Year (unitless)
Month (unitless)
Date (unitless)
Transect (unitless)
Start (meters (m))
End (meters (m))
Length (meters (m))
Type_Code (unitless)
Type (unitless)
Depth (centimeters (cm))
Investigator (unitless)
Notes (unitless)


[WS1005 cruise track] - Cruise track (1-min fixes; from R2R) from R/V F.G. Walton Smith cruise WS1005 from Miami to the Bahamas in 2010 (Were Protists the Beginning of the End for Stromatolites? )

1-minute resolution navigation from the WS1005 cruise aboard the R/V F.G. Walton Smith from 18 March to 24 March 2010.

cdm_data_type = Other
VARIABLES:
date_utc (unitless)
time_utc (HHMM.mmmmm)
latitude (degrees_north)
longitude (degrees_east)
sog (Speed Over Ground, m/s)
cog (Course Over Ground, degrees clockwise from North)
time (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)


[X-ray diffraction from seafloor sulfide deposits East Pacific Rise 9-10 North] - Synchrotron micro-probe X-ray diffraction data from seafloor sulfide deposits collected during cruise AT42-09 on the East Pacific Rise (EPR) in April 2019. (Collaborative Research: From hot to cold in the dark - shifts in seafloor massive sulfide microbial communities as physical and geochemical conditions change after venting ceases)

Synchrotron micro-probe X-ray diffraction data were collected for seafloor sulfide deposits. Seafloor sulfide mineral samples were collected from hydrothermally active chimneys and inactive off-axis massive sulfide deposits at East Pacific Rise (EPR) 9.50°N in 2019-2021 on cruise AT42-09. Samples were collected using the HOV Alvin. Samples were placed in a positive-pressure glove bag flushed with N2 (g), sparged with N2, heat-sealed into mylar bags containing Anaeropaks, and stored at -20°C.

Epoxy embedded petrographic thin sections were created using these samples. Subsamples were dried for 24 hours under N2 (g), vacuum embedded in epoxy resin (Struers EpoFix Resin, 1L kit: Part #40200030) following manufacturer's guidelines, and cured under N2 (g) for 24 hours. Each epoxy-embedded sample was pre-cut using a wafering saw then sent to Spectrum Petrographics, Inc. (Washington, USA) for preparation as 30 micron thick, double-polished thin sections mounted on quartz slides using methods to limit sample exposure to water and ambient air. When not in use, thin-sections were stored under N2 (g) to limit oxidation. Thin sections were analyzed for X-ray diffraction at the X-ray Fluorescence Microprobe beamline "XFM", National Synchrotron Light Source II (NSLS II), Brookhaven National Laboratory, NY.

cdm_data_type = Other
VARIABLES:
Cruise (unitless)
File_name (unitless)
Sample_name (unitless)
sample_descrip (Time, unitless)
Hydrotherml_vent_category (unitless)
Location (unitless)
latitude (Lat_dd, degrees_north)
longitude (Lon_dd, degrees_east)
depth_f (Depth_mbs, m)
Hdg (degrees)
Date_collected (unitless)
Time_collected (unitless)
time (Iso_datetime_utc, seconds since 1970-01-01T00:00:00Z)


[X-Ray Diffraction Results] - Results of x-ray diffraction (XRD) analyses collected for various Oceanic Flux Program (OFP) samples and end members for the for OFP/fish carbonate study (OCE-PRF:  Towards Quantifying Calcium Carbonate Sediment Dissolution During Marine Diagenesis)

These data include results of x-ray diffraction (XRD) analyses, such as mineral abundances and magnesium (Mg) content in calcite, that were collected for various Oceanic Flux Program (OFP) samples and end members such as fish carbonates, bryozoan, and coccolithophore for OFP/fish carbonate study. The sources of samples are included in the dataset, and for samples that were obtained from cruises, the cruise number is included. The raw data are included as supplemental files.

cdm_data_type = Other
VARIABLES:
Sample_ID (unitless)
Sample_type (unitless)
Sample_source (unitless)
depth (Trap_depth, m)
latitude (degrees_north)
longitude (degrees_east)
Phase (unitless)
Mg_content (mol percent)
calcite_phase (weight percent)
calcite_phase_error (weight percent)


[Xray diffraction data] - X-ray diffractogram data collected from 2013 to 2017 (INSPIRE Pyrite project) (INSPIRE Track 1: Microbial Sulfur Metabolism and its Potential for Transforming the Growth of Epitaxial Solar Cell Absorbers)

X-ray diffractogram data collected from 2013 to 2017 (INSPIRE Pyrite project)

cdm_data_type = Other
VARIABLES:
experiment_type (unitless)
angle_2Theta (Angle 2 Theta, unitless)
intensity (arbitrary unit)


[XRD data and results for OAE North Atlantic experiments] - X-ray diffraction (XRD) raw data and Rietveld refinement results for precipitates from shipboard ocean alkalinity enhancement (OAE) experiments in the North Atlantic on R/V Atlantic Explorer cruise AE2320 in September 2023 (OCE-PRF:  Towards Quantifying Calcium Carbonate Sediment Dissolution During Marine Diagenesis)

To explore mineral formation due to alkalinity addition, we present results from shipboard experiments in which an aqueous solution of NaOH was added to unfiltered seawater collected from the surface ocean in the Sargasso Sea. Alkalinity addition ranged from 500 to 2000 micromoles per kilogram (µmol/kg) and the carbonate chemistry was monitored through time by measuring total alkalinity (TA) and dissolved inorganic carbon (DIC), which were used to calculate Ω. The amount of precipitate and its minerology were determined throughout the experiments. Mineral precipitation took place in all experiments over a timescale of hours to days. The dominant mineralogy of precipitate is aragonite with trace amounts of calcite and brucite. Aragonite crystallite size increases and its micro-strain decreases with time, consistent with Ostwald ripening. This dataset contains raw XRD data as well as XRD results (mineral abundances, crystallite size, strain, and unit cell parameters) determined via Rietveld refinement. The seawater for the experiments was collected near the Bermuda Atlantic Time Series (31.6667 N, 64.1667 W), which is also the same location where the experiments were conducted and filtered to obtain the precipitates, which were analyzed with XRD.

cdm_data_type = Other
VARIABLES:
Experiment_name (unitless)
Alkalinity_addition (micromoles per kilogram (umol/kg))
Sample (unitless)
Exp_start_day (unitless)
Exp_start_time (unitless)
Filtration_start_day (unitless)
Filtration_time (unitless)
Filtration_end_day (unitless)
Filtration_end_time (unitless)
Duration_till_filtration_started (hours)
Duration_till_filtration_ended (hours)
Experiment_mean_duration (hours)
Filtration_duration (hours)
Aragonite (percent)
... (13 more variables)


[XRD XPS and Raman spectrum data] - XRD, XPS, and raman data collected from 2013 to 2017 (INSPIRE Pyrite) (INSPIRE Track 1: Microbial Sulfur Metabolism and its Potential for Transforming the Growth of Epitaxial Solar Cell Absorbers)

XRD, XPS, and raman data collected from 2013 to 2017 (INSPIRE Pyrite)

cdm_data_type = Other
VARIABLES:
data_type (unitless)
theta2 (degree)
binding_energy (eV)
intensity_type (unitless)
raman_shift (centimeters)
intensity (arbitrary units)


[yawzi point and tektite] - Coral community structure at Yawazi Point and Tektite in St. John before and after five hurricanes from 1988–2017 (RUI-LTREB Renewal: Three decades of coral reef community dynamics in St. John, USVI: 2014-2019)

These files contain data that support an analysis of the effects of two major hurricanes on coral reefs that have been extensively studied for more than three decades. Major tropical storms are destructive phenomena with large effects on the community dynamics of multiple biomes. On coral reefs, their impacts have been described for decades, leading to the expectation that future storms should have effects similar to those recorded in the past. This expectation relies on the assumption that storm intensities will remain unchanged, and the impacted coral reef communities are similar to those of the recent past; neither assumption is correct. These data support a study quantifying the effects of two category five hurricanes on the reefs of St. John, US Virgin Islands, where 31 y of time-series analyses reveal chronic coral mortality, increasing macroalgal abundance, and five major hurricanes that caused acute coral mortality. Contextualized by these trends, the effects of the most recent storms, Hurricanes Irma and Maria (September 2017), on coral cover were modest. While mean absolute coral cover declined 1\u20134% depending on site, these effects were not statistically discernable. Following decades of increasing abundance of macroalgae, this functional group responded to the  recent hurricanes with large increases in abundance on both absolute and relative scales. Decades of chronic mortality have changed the coral assemblages of St. John to create degraded communities that are resistant to severe storms.

cdm_data_type = Other
VARIABLES:
Site (unitless)
Transect_num (unitless)
Year (years)
Quadrat (unitless)
Timing (unitless)
Orbicella_complex (percent cover)
Montastraea (percent cover)
Agaricia (percent cover)
Colpophyllia (percent cover)
Diploria (percent cover)
Eusmilia (percent cover)
Madracis (percent cover)
... (8 more variables)


[Year 1 orbitrap MZML files] - Raw proteome mass spectrometry data (.mzML files) from pacific herring embryos sampled at Semiahmoo Bay between February and April 2022 (MCA: Utilizing high-throughput proteomics to build a conceptual model of the effects of environmental change on early life stages of genetically diverse herring populations)

These are the raw data files from 5 cohorts of pacific herring embryos collected from Feb through April of 2022.  Embryos were homogenized, and digested for proteomic analysis on a Lumos Orbitrap.  Pooled samples were used with narrow window scans for library generation. The purpose of this data set is exploratory analysis for seasonal differences between early life stage proteome of pacific herring.  All embryos are believed to be from the Semiahmoo Bay population since the Cherry Point population had no spawn detected in 2022.

cdm_data_type = Other
VARIABLES:
Location (unitless)
Date_Sampling (unitless)
latitude (degrees_north)
longitude (degrees_east)
Sample_ID (unitless)
Cohort (unitless)
Replicate (unitless)
Mass_Spec_Run_Number (unitless)
Date_Mass_Spec (unitless)
Sample_Type (unitless)
Filename (unitless)


[zoo_cb_meter_moc] - Zooplankton cubic meter count data collected in the 1-m2 MOCNESS during R/V Albatross IV, R/V Endeavor and R/V Oceanus broadscale cruises in the Gulf of Maine and Georges Bank from 1995-1999 and processed at GSO/URI (GB project) (U.S. GLOBEC Georges Bank)

Zooplankton cubic meter count data collected in the 1-m2 MOCNESS during R/V Albatross IV, R/V Endeavor and R/V Oceanus broadscale cruises in the Gulf of Maine and Georges Bank from 1995-1999 and processed at GSO/URI

cdm_data_type = Other
VARIABLES:
cruiseid (text)
cruise_type (text)
year_cruise_begin (unitless)
month_cruise_begin (mm (01 to12))
day_cruise_begin (dd (01 to 31))
year_cruise_end (unitless)
month_cruise_end (mm (01 to 12))
day_cruise_end (dd (01 to 31))
station (unitless)
station_std (unitless)
depth_w (Depth, meters)
event (unitless)
inst (text)
tow (unitless)
latitude (degrees_north)
longitude (degrees_east)
year_utc_begin (unitless)
month_utc_begin (mm (01 to 12))
day_utc_begin (dd (01 to 31))
time_utc_begin (HHMM)
year_utc_end (unitless)
month_utc_end (mm (01 to 12))
day_utc_end (dd (01 to 31))
time_utc_end (HHMM)
allsort_flag (unitless)
... (11 more variables)


[zoo_pump] - Zooplankton counts (density) from R/V Seward Johnson, R/V Oceanus, and R/V Edwin Link cruises SJ9508, OC303, EL9904, and EL9905 in the Gulf of Maine and Georges Bank from 1995-1999 (GB project) (U.S. GLOBEC Georges Bank)

Zooplankton counts (density) from R/V Seward Johnson, R/V Oceanus, and R/V Edwin Link cruises SJ9508, OC303, EL9904, and EL9905 in the Gulf of Maine and Georges Bank from 1995-1999

cdm_data_type = Other
VARIABLES:
cruiseid
year (GMT)
event
yrday_gmt (decimalday,GMT)
month_gmt (GMT)
day_gmt (GMT)
time_gmt (GMT)
station
latitude (degrees_north)
longitude (degrees_east)
depth (m)
taxon
stage
stage_num
sex
num_per_m3 (number per cubic meter)


[zoo_sq_meter_moc] - Zooplankton square meter count data collected in the 1-m2 MOCNESS during R/V Albatross IV, R/V Endeavor and R/V Oceanus broadscale cruises in the Gulf of Maine and Georges Bank from 1995-1999 and processed at GSO/URI (GB project) (U.S. GLOBEC Georges Bank)

Zooplankton square meter count data collected in the 1-m2 MOCNESS during R/V Albatross IV, R/V Endeavor and R/V Oceanus broadscale cruises in the Gulf of Maine and Georges Bank from 1995-1999 and processed at GSO/UR

cdm_data_type = Other
VARIABLES:
cruiseid (unitless)
cruise_type (unitless)
year_cruise_begin (unitless)
month_cruise_begin (mm (01 to 12))
day_cruise_begin (dd (01 to 31))
year_cruise_end (unitless)
month_cruise_end (mm (01 to 12))
day_cruise_end (dd (01 to 31))
station (unitless)
station_std (unitless)
depth_w (Depth, meters)
event (unitless)
inst (unitless)
tow (unitless)
latitude (degrees_north)
longitude (degrees_east)
year_utc_begin (unitless)
month_utc_begin (mm (01 to 12))
day_utc_begin (dd (01 to 31))
time_utc_begin (HHMM)
year_utc_end (unitless)
month_utc_end (mm (01 to 12))
day_utc_end (dd (01 to 31))
time_utc_end (HHMM)
allsort_flag (unitless)
... (11 more variables)


[zooplankton abund and stages_lmg] - Zooplankton abundance with developmental stages from MOCNESS nets from the ARSV Laurence M. Gould LMG0104, LMG0203 from the Southern Ocean, 2001-2002 (SOGLOBEC project) (U.S. GLOBEC Southern Ocean)

Zooplankton abundance with developmental stages from MOCNESS nets from the ARSV Laurence M. Gould LMG0104, LMG0203 from the Southern Ocean, 2001-2002.

cdm_data_type = Other
VARIABLES:
cruiseid
year (unitless)
station
cast
month_local
day_local
time_start_local (HHmm)
event
latitude (degrees_north)
longitude (degrees_east)
net
depth_open (Depth, meters)
depth (m)
vol_filt (cubic meters)
displ_vol (cubic centimeters)
taxon_group
taxon
stage
samp_fraction_denom
count
abundance (number/m^3)
comments (unitless)


[zooplankton abund and stages_nbp] - Zooplankton abundance and stages from MOCNESS nets from the RVIB Nathaniel B. Palmer from the Southern Ocean, 2001-2002 (SOGLOBEC project, Southern Ocean Krill project) (U.S. GLOBEC Southern Ocean)

Zooplankton from MOCNESS nets were identified and the net sample displacement volume was measured from the RVIB Nathaniel B. Palmer, Southern Ocean, 2001-2002.

cdm_data_type = Other
VARIABLES:
cruiseid
year
station
tow
month_local
day_local
time_local (HHmm)
event
latitude (degrees_north)
longitude (degrees_east)
depth_w (Depth, meters)
region
yrday_local
net
depth_open (Depth, meters)
depth (m)
depth_mid (Depth, meters)
vol_filt (meters3)
displ_vol (milliliters)
taxon_group
taxon
stage
abundance (number per meter3)
comments (unitless)


[zooplankton abund biomass_MOC - nbp] - Zooplankton abundance and biomass from MOCNESS silhouettes, from the RVIB Nathaniel B. Palmer NBP0103, NBP0104 from the Southern Ocean, 2001-2002 (SOGLOBEC project, Southern Ocean Krill project) (U.S. GLOBEC Southern Ocean)

Zooplankton abundance and biomass from MOCNESS silhouettes, from the RVIB Nathaniel B. Palmer NBP0103, NBP0104 from the Southern Ocean, austral fall and winter, 2001-2002

cdm_data_type = Other
VARIABLES:
cruiseid
year
tow
latitude (degrees_north)
longitude (degrees_east)
depth_w (Depth, meters)
net
depth_open (Depth, meters)
depth (m)
depth_mid (Depth, meters)
abundance_total (no. per cubic meter per net)
biomass_total (milligrams per meter3)
taxon
abundance (no. per meter3pernet)
biomass (milligrams per meter3)


[Zooplankton abundance and size from Bongo plankton net tows] - Zooplankton abundance and size data from Bongo plankton net tows conducted in the subtropical Southern California Bight during February and April 2021 (RAPID: Understanding the unprecedented anchovy response to warm-water conditions in the California Current)

This dataset includes zooplankton abundance and size from Bongo plankton net tows conducted in the subtropical Southern California Bight during February and April 2021. Net tows were carried out on several cruises aboard R/V Bob and Betty Beyster and R/V Shearwater.

cdm_data_type = Other
VARIABLES:
Cruise (unitless)
time (Iso_datetime_utc, seconds since 1970-01-01T00:00:00Z)
ISO_DateTime_PDT (unitless)
Line (unitless)
St (unitless)
Lat (degrees_north)
longitude (Long, degrees_east)
Tow_depth (meters (m))
Mesh_size (micrometers (um))
Taxa (unitless)
Development_stage (unitless)
ind_per_cubic_m (individuals per cubic meter)
Avg_length (micrometers (um))
SD_length (micrometers (um))
Avg_width (micrometers (um))
SD_width (micrometers (um))
Num_Measured (unitless)