* The List of All Active Datasets in this ERDDAP *

Summary:
This dataset is a table which has a row of information for each dataset currently active in this ERDDAP.

cdm_data_type = Other
VARIABLES:
datasetID (Dataset ID)
accessible
institution
dataStructure (Data Structure)
cdm_data_type (Common Data Model Type)
class (ERDDAP Class)
title
minLongitude (Minimum Longitude, degrees_east)
maxLongitude (Maximum Longitude, degrees_east)
longitudeSpacing (Average Grid Longitude Spacing, degrees_east)
minLatitude (Minimum Latitude, degrees_north)
maxLatitude (Maximum Latitude, degrees_north)
latitudeSpacing (Average Grid Latitude Spacing, degrees_north)
minAltitude (Minimum Altitude (or negative Depth), m)
maxAltitude (Maximum Altitude (or negative Depth), m)
minTime (Minimum Time, seconds since 1970-01-01T00:00:00Z)
maxTime (Maximum Time, seconds since 1970-01-01T00:00:00Z)
timeSpacing (Average Grid Time Spacing, seconds)
griddap (Base URL of OPeNDAP Grid Service)
subset (URL of Subset Web Page)
tabledap (Base URL of OPeNDAP Table/Sequence Service)
MakeAGraph (URL of Make-A-Graph Web Page)
sos (Base URL of SOS Service)
wcs (Base URL of WCS Service)
wms (Base URL of WMS Service)
files (Base URL of "files" Service)
... (10 more variables)


[13C incubation cell counts] - Counts of Prochlorococcus from on-deck incubations with 13C-bicarbonate as part of DNA-SIP experiments conducted on Hawaii Ocean Time-series (HOT) cruises, HOT283 and HOT288 in 2016 (Microbial ecology of coexisting ecotypes: Are all Prochlorococcus equal?)

Summary:
Counts of Prochlorococcus from on-deck incubations with 13C-bicarbonate as part of DNA-SIP experiments conducted on Hawaii Ocean Time-series (HOT) cruises, HOT283 and HOT288 in 2016.

cdm_data_type = Other
VARIABLES:
cruise (unitless)
incubation (unitless)
depth2 (Depth, unitless)
timepoint (hours)
replicate (unitless)
prochlorococcus (cells per milliliter (cells/mL))


[14C 32Si Experimental - from RR1813] - 32Si and 14C production data (experimental) from EXPORTS cruise RR1813 on R/V Roger Revelle in the Subarctic North Pacific near Station PAPA from August to September 2018 (Collaborative Research: Diatoms, Food Webs and Carbon Export - Leveraging NASA EXPORTS to Test the Role of Diatom Physiology in the Biological Carbon Pump)

Summary:
This dataset includes 32Si and 14C production data (experimental) from EXPORTS cruise RR1813. The EXPORTS field campaign in the subarctic North Pacific sampled an ecosystem characterized as high nutrient low chlorophyll (HNLC) due to low iron (Fe) levels that are primary controllers constraining phytoplankton utilization of other nutrients. It has been a paradigm in low Fe, HNLC systems that diatoms grow at elevated Si:C and Si:N ratios and should be efficiently exported as particles significantly enriched in Si relative to C. However, Fe limitation also alters diatoms species composition and the high Si demand imposed by low Fe can drive HNLC regions to Si limitation or Si/Fe co-limitation. Thus, the degree of Si and/or Fe stress in HNLC waters can all alter diatom taxonomic composition, the elemental composition of diatom cells, and the path cells follow through the food web ultimately altering diatom carbon export.\r\n\r\nWithin each ecosystem state examined in the EXPORTS program, nutrient biogeochemistry, diatom and phytoplankton community structure, and global diatom gene expression patterns (metatranscriptomics) are characterized in the lit ocean. Nutrient amendment experiments with tracer addition (14C, 32Si) are used to quantify the level of Si and Fe stress being experienced by the phytoplankton and to contextualize taxa-specific metatranscriptome responses for resolving gene expression profiles in the in situ communities.

cdm_data_type = Other
VARIABLES:
Cruise (unitless)
Date_Zulu (unitless)
Time_Zulu (unitless)
Event_num (unitless)
Activity (unitless)
Station (unitless)
Cast (unitless)
latitude (degrees_north)
longitude (degrees_east)
Rosette_Bottle (unitless)
depth (Target Depth, m)
pcnt_lo (unitless (percent))
... (22 more variables)


[16S rRNA gene from DNA] - 16S rRNA gene (from DNA) from samples collected on cruise Chikyu-331 in the Okinawa Trough, Japan from September to October 2010 (An In-Depth analysis of the subvent biosphere within Okinawa Backarc Basin (IODP 331, Iheya North Hydrothermal Field) sediments)

Summary:
The purpose of this dataset was to investigate taxonomic changes via the 16S rRNA gene from extractable DNA across 45 meters of recovered core. The temperature gradient in this section of the dynamic Iheya North Hydrothermal system was estimated to be ~3C/m. The interval transitions sharply from low-temperature marine mud to hydrothermally altered clay.

cdm_data_type = Other
VARIABLES:
Cruise_ID (unitless)
IODP_Sample_Number (unitless)
latitude (degrees_north)
longitude (degrees_east)
Water_depth (meters)
Top_Depth (meters below seafloor)
Bottom_Depth (meters below seafloor)
Sediment_type (unitless)
Estimated_Temp (degrees Celsius)
MGRAST_Accession_ID (unitless)
Notes (unitless)


[16S rRNA gene from RNA] - 16S rRNA gene (from RNA) from samples collected on cruise Chikyu-331 in the Okinawa Trough, Japan from September to October 2010 (An In-Depth analysis of the subvent biosphere within Okinawa Backarc Basin (IODP 331, Iheya North Hydrothermal Field) sediments)

Summary:
RNA extractions were attempted from sediments at Sites C0014 and C0017 to selectively investigate the active microbial populations at these sites. This study was conducted to supplement the gene-based and metagenomic studies. However, the results from sequenced reverse transcribe 16S rRNA demonstrate the sensitivity of extraction and amplification to external nucleic acids and attest to the challenges in working with low biomass environmental samples. Inconsistencies between primersets and replicates make conclusions about the results of this RNA study extremely tenuous.

cdm_data_type = Other
VARIABLES:
Cruise_ID (unitless)
Sample_Name (unitless)
latitude (degrees_north)
longitude (degrees_east)
Water_depth (meters)
Top_Depth (meters below seafloor)
Bottom_Depth (meters below seafloor)
Sediment_type (unitless)
Estimated_Temp (degrees Celsius)
Nucleic_Acid_amplified (unitless)
Primer_Set_16S_rRNA (Primer Set 16 S R RNA, unitless)
Illumina_dataset (unitless)
Notes (unitless)


[18S rRNA gene tag sequences from DNA and RNA] - NCBI accession metadata for 18S rRNA gene tag sequences from DNA and RNA from samples collected in coastal California in 2013 and 2014 (Protistan, prokaryotic, and viral processes at the San Pedro Ocean Time-series)

Summary:
Raw DNA and RNA V4 tag sequences include spatially and temporally distinct samples from coastal California.  Samples were collected in Niskin bottles with a CTD rosette at the San Pedro Ocean Time-series (SPOT) between April of 2013 and January of 2014.  This dataset contains sequence data accession numbers and metadata for the National Center for Biotechnology Information (NCBI) Sequence Read Archive (SRA) database (SRA Study ID: SRP070577, BioProject: PRJNA311248).

cdm_data_type = Other
VARIABLES:
bioproject_accession (unitless)
sample_name (unitless)
SRA_run_ID (unitless)
SRA_run_link (unitless)
library_ID (unitless)
SRA_study_ID (unitless)
SRA_title (unitless)
library_strategy (unitless)
library_source (unitless)
library_selection (unitless)
library_layout (unitless)
platform (unitless)
instrument_model (unitless)
design_description (unitless)
filetype (unitless)
filename (unitless)
filetpe2 (unitless)
filename2 (unitless)
depth2 (Depth, various)
latitude (degrees_north)
longitude (degrees_east)


[2018 Ross Sea Crystal Krill Grazing] - Grazing rates of Euphausia crystallorophias from RVIB Nathaniel B. Palmer NBP1801 in the Ross Sea, Jan.-Feb. 2018 (Using Bio-acoustics on an Autonomous Surveying Platform for the Examination of Phytoplankton-zooplankton and Fish Interactions in the Western Ross Sea)

Summary:
Four experiments using the gut fluorescence/gut evacuation technique were conducted during the R/V Nathaniel B. Palmer cruise NBP1801 in Jan-Feb 2018 to determine grazing rates of crystal krill, Euphausia crystallorophias.

cdm_data_type = Other
VARIABLES:
Measurement (unitless)
Krill_number (unitless)
Time_Interval_minutes (minutes)
Bucket_number (unitless)
E1_Krill_length_mm (mm = millimeters)
E1_Chlorophyll_a_ug_L (Concentration Of Chlorophyll In Sea Water, ug/L = micrograms per liter)
E1_Phaeopigment_ug_L (ug/L = micrograms per liter)
E2_Krill_length_mm (mm = millimeters)
E2_Chlorophyll_a_ug_L (Concentration Of Chlorophyll In Sea Water, ug/L = micrograms per liter)
E2_Phaeopigment_ug_L (ug/L = micrograms per liter)
E3_Krill_length_mm (mm = millimeters)
E3_Chlorophyll_a_ug_L (Concentration Of Chlorophyll In Sea Water, ug/L = micrograms per liter)
E3_Phaeopigment_ug_L (ug/L = micrograms per liter)
E4_Krill_length_mm (mm = millimeters)
E4_Chlorophyll_a_ug_L (Concentration Of Chlorophyll In Sea Water, ug/L = micrograms per liter)
E4_Phaeopigment_ug_L (ug/L = micrograms per liter)


[2018 Ross Sea Zooplankton Abundance: IKMT] - Zooplankton abundance from Isaacs-Kid Midwater Trawl (IKMT) hauls from RVIB Nathaniel B. Palmer NBP1801 in the Ross Sea, Jan.-Feb. 2018 (Using Bio-acoustics on an Autonomous Surveying Platform for the Examination of Phytoplankton-zooplankton and Fish Interactions in the Western Ross Sea)

Summary:
Isaacs-Kid Midwater Trawl (IKMT) hauls were conducted during the R/V Nathaniel B. Palmer cruise NBP18-01 in Jan-Feb 2018. These data represent the zooplankton species and abundance analysis resulting from these sample collections. A companion dataset of ring net tow abundances is also available.

cdm_data_type = Other
VARIABLES:
Method (unitless)
Tow_Trawl_number (unitless)
time (ISO Date Time UTC Start, seconds since 1970-01-01T00:00:00Z)
ISO_DateTime_UTC_end (ISO Date Time UTC End, unitless)
latitude (degrees_north)
longitude (degrees_east)
lat_end_decdeg (Latitude, decimal degrees)
lon_end_decdeg (Longitude, decimal degrees)
depth (Net Depth M, m)
Bottom_depth_m (meters)
SST_deg_C (Degrees Celsius)
Flowmeter_start (unitless)
Flowmeter_end (unitless)
Volume_m3 (cubic meters)
Euphausiids_Euphausia_crystallorophias (number/meter^3)
Ecrystallorophias_small_juveniles (number/meter^3)
Euphausia_superba (number/meter^3)
Thysanoessa_macrura (number/meter^3)
Amphipods_Vibilia_stebbingi (number/meter^3)
Primno_macropa (number/meter^3)
Themisto_gaudichaudii (number/meter^3)
Hyperoche_sp (number/meter^3)
Eusirus_sp (number/meter^3)
Chaetognaths_Pseudosagitta (number/meter^3)
... (10 more variables)


[2018 Ross Sea Zooplankton Abundance: Ring net] - Zooplankton abundance from ring net tows from RVIB Nathaniel B. Palmer NBP1801 in the Ross Sea, January 2018 (Using Bio-acoustics on an Autonomous Surveying Platform for the Examination of Phytoplankton-zooplankton and Fish Interactions in the Western Ross Sea)

Summary:
Net tows were conducted during the R/V Nathaniel B. Palmer cruise NBP18-01 in January 2018. These data represent the zooplankton species and abundance analysis resulting from these sample collections. A companion dataset of mid-water trawls abundances is also available.

cdm_data_type = Other
VARIABLES:
Method (unitless)
Tow_Trawl_number (unitless)
time (ISO Date Time UTC Start, seconds since 1970-01-01T00:00:00Z)
ISO_DateTime_UTC_end (ISO Date Time UTC End, unitless)
latitude (degrees_north)
longitude (degrees_east)
lat_end_decdeg (Latitude, decimal degrees)
lon_end_decdeg (Longitude, decimal degrees)
depth (Net Depth M, m)
Bottom_depth_m (meters)
SST_deg_C (Degrees Celsius)
Flowmeter_start (unitless)
Flowmeter_end (Flowmeter  End, unitless)
Volume_m3 (cubic meters)
Copepods_Calanoides_acutus (number/meter^3)
C_acutus_CIII_to_V (number/meter^3)
Metridia_gerlachei (number/meter^3)
Oithona_similis (number/meter^3)
Calanus_simillimus (number/meter^3)
Paraeuchaeta_antarctica (number/meter^3)
Oncaea_sp (number/meter^3)
Gaidius_tenuispinus (number/meter^3)
Heterorhabdus_sp (number/meter^3)
Unspecified_Nauplii (number/meter^3)
Euphausiids_Euphausia_crystallorophias (number/meter^3)
... (19 more variables)


[2019 BAIT / GApr13 Dissolved Iron Concentration and Isotopes] - Dissolved iron concentrations and stable isotope ratios from water column samples collected during four Bermuda Atlantic Iron Time-series (BAIT) cruises EN631, AE1909, AE1921, AE1930 in the Western Subtropical North Atlantic Gyre in 2019 (NSFGEO-NERC: Collaborative Research: Using Time-series Field Observations to Constrain an Ocean Iron Model)

Summary:
These data include dissolved iron (Fe) concentrations and stable isotope ratios (δ56Fe relative to IRMM-014) from water column samples collected during four Bermuda Atlantic Iron Time-Series (BAIT) cruises (GApr13) in the Bermuda Atlantic Time-series Study (BATS) region in March, May, August, and November 2019. Analyses were carried out at the University of South Florida.

cdm_data_type = Other
VARIABLES:
Cruise_ID (unitless)
Station_ID (unitless)
Start_Date_UTC (unitless)
latitude (Start_latitude, degrees_north)
longitude (Start_longitude, degrees_east)
Sample_ID (unitless)
depth (Sample_depth, m)
Fe_56_54_D_DELTA_BOTTLE (per mil (‰))
SD1_Fe_56_54_D_DELTA_BOTTLE (per mil (‰))
Flag_Fe_56_54_D_DELTA_BOTTLE (unitless)
Fe_D_CONC_BOTTLE (nanomoles per kilogram (nmol/kg))
SD1_Fe_D_CONC_BOTTLE (nanomoles per kilogram (nmol/kg))
Flag_Fe_D_CONC_BOTTLE (unitless)
Fe_56_54_D_DELTA_BOAT_PUMP (per mil (‰))
SD1_Fe_56_54_D_DELTA_BOAT_PUMP (per mil (‰))
Flag_Fe_56_54_D_DELTA_BOAT_PUMP (unitless)
Fe_D_CONC_BOAT_PUMP (nanomoles per kilogram (nmol/kg))
SD1_Fe_D_CONC_BOAT_PUMP (nanomoles per kilogram (nmol/kg))
Flag_Fe_D_CONC_BOAT_PUMP (unitless)


[2019 BAIT Particulate Metals] - Particulate trace element concentrations measured during four cruises in 2019 at locations around the Bermuda Atlantic Time-series Study (BATS) station (NSFGEO-NERC: Collaborative Research: Using Time-series Field Observations to Constrain an Ocean Iron Model)

Summary:
Particulate trace element concentrations were measured during 4 BATS cruises (March, May, August, November) in 2019 as part of the Bermuda Atlantic Iron Timeseries (BAIT) project. Three stations were sampled around the BATS station to 1800 meters (m) with a trace-metal clean rosette system. Collected water was passed through 0.45-micrometer (um) Supor membranes and subsequently subjected to both a weak acid leach and a total digest. Samples were analyzed via magnetic sector ICPMS for aluminum (Al), phosphorus (P), titanium (Ti), vanadium (V), manganese (Mn), iron (Fe), cobalt (Co), nickel (Ni), copper (Cu), zinc (Zn), cadmium (Cd), barium (Ba), lead (Pb), and thorium (Th). Data have been used to partition particulate Fe into lithogenic, biogenic, and authigenic fractions, and to understand controls on Fe cycling in the upper ocean over a seasonal cycle.

cdm_data_type = Other
VARIABLES:
CRUISE (unitless)
STATION (unitless)
UNIQUE_CAST_ID (unitless)
SAMPLE_ID (unitless)
TMP (unitless)
DEPTH (meters (m))
STATION_TYPE (unitless)
DATE (unitless)
latitude (degrees_north)
longitude (degrees_east)
AL27_TPL_CONC_BOTTLE (nanomolar (nM))
AL27_TPL_FLAG_BOTTLE (unitless)
P31_TPL_CONC_BOTTLE (nanomolar (nM))
P31_TPL_FLAG_BOTTLE (unitless)
TI47_TPL_CONC_BOTTLE (nanomolar (nM))
TI47_TPL_FLAG_BOTTLE (unitless)
V51_TPL_CONC_BOTTLE (nanomolar (nM))
V51_TPL_FLAG_BOTTLE (unitless)
MN55_TPL_CONC_BOTTLE (nanomolar (nM))
... (47 more variables)


[234Th Flux] - 234Th flux in epipelagic waters at Station ALOHA and the Equatorial Pacific from R/V Kilo Moana cruises KM1407, KM1418, & KM1515 during 2014-2015 (Evaluating the relative importance of suspended and sinking particles to the meso and bathypelagic food web in the central North Pacific)

Summary:
234Th flux in epipelagic waters at Station ALOHA and the Equatorial Pacific from R/V Kilo Moana cruises KM1407, KM1418, & KM1515 during 2014-2015.

cdm_data_type = Other
VARIABLES:
Cruise (unitless)
Date_initial (unitless)
Date_final (unitless)
Site (unitless)
latitude (degrees_north)
longitude (degrees_east)
Season (unitless)
depth (m)
Th_flux (dpm m-2 d-1)
Th_flux_error (dpm m-2 d-1)


[32Si and 14C Production - Profiles - from DY131] - Depth profiles in the euphotic zone of nitrate, silicate, and phosphate concentrations and profiles of silicic acid uptake rates from EXPORTS cruise DY131 in the North Atlantic during May 2021 (Collaborative Research: Diatoms, Food Webs and Carbon Export - Leveraging NASA EXPORTS to Test the Role of Diatom Physiology in the Biological Carbon Pump)

Summary:
32Si and 14C Production - Profiles - from DY131

cdm_data_type = Other
VARIABLES:
Cruise (cruise during which sample was collected\)
time (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)
Event (Event number from R2R event log)
Activity (which instrument was used for sample collection)
Station (station identifier)
Cast (CTD or TM cast number)
latitude (degrees_north)
longitude (degrees_east)
Target_Depth (meters (m))
Actual_Depth (meters (m))
Light_Level (unitless (percent))
Phosphate (millimoles per cubic meter (mmol m^3))
Phosphate_Flag (unitless)
Silicate (millimoles per cubic meter (mmol m^3))
Silicate_Flag (unitless)
Nitrite (millimoles per cubic meter (mmol m^3))
Nitrite_Flag (unitless)
Nitrate_and_Nitrite (millimoles per cubic meter (mmol m^3))
Nitrate_and_Nitrite_Flag (unitless)
Blank_Corrected_POC (milligrams per cubic meter (mg m^3))
POC_Flag (unitless)
Blank_Corrected_PON (milligrams per cubic meter (mg m^3))
PON_Flag (unitless)
chl_a_0_6um_to_5um (micrograms per cubic meter (ug m^3))
chl_a_gt_5um (micrograms per cubic meter (ug m^3))
bSi_0_6um_to_5um (nanomoles Si per liter (nmol Si L^1))
bSi_gt_5um (nanomoles Si per liter (nmol Si L^1))
... (4 more variables)


[32Si Profiles - from RR1813] - 32Si data from EXPORTS cruise RR1813 on R/V Roger Revelle in the Subarctic North Pacific near Station PAPA from August to September 2018 (Collaborative Research: Diatoms, Food Webs and Carbon Export - Leveraging NASA EXPORTS to Test the Role of Diatom Physiology in the Biological Carbon Pump)

Summary:
This dataset includes depth profiles in the euphotic zone of nutrient (nitrate, silicate, phosphate) concentrations and profiles of silicic acid uptake rates from EXPORTS cruise RR1813. \r\n\r\nThe EXPORTS field campaign in the subarctic North Pacific sampled an ecosystem characterized as high nutrient low chlorophyll (HNLC) due to low iron (Fe) levels that are primary controllers constraining phytoplankton utilization of other nutrients. It has been a paradigm in low Fe, HNLC systems that diatoms grow at elevated Si:C and Si:N ratios and should be efficiently exported as particles significantly enriched in Si relative to C. However, Fe limitation also alters diatoms species composition and the high Si demand imposed by low Fe can drive HNLC regions to Si limitation or Si/Fe co-limitation. Thus, the degree of Si and/or Fe stress in HNLC waters can all alter diatom taxonomic composition, the elemental composition of diatom cells, and the path cells follow through the food web ultimately altering diatom carbon export.\r\n\r\nWithin each ecosystem state examined in the EXPORTS program, nutrient biogeochemistry, diatom and phytoplankton community structure, and global diatom gene expression patterns (metatranscriptomics) are characterized in the lit ocean. Nutrient amendment experiments with tracer addition (14C, 32Si) are used to quantify the level of Si and Fe stress being experienced by the phytoplankton and to contextualize taxa-specific metatranscriptome responses for resolving gene expression profiles in the in situ communities.

cdm_data_type = Other
VARIABLES:
Cruise (unitless)
Date_Zulu (unitless)
Time_Zulu (unitless)
Event_num (unitless)
Activity (unitless)
Station (unitless)
Cast (unitless)
latitude (degrees_north)
longitude (degrees_east)
Rosette_Bottle (unitless)
depth (Target Depth, m)
... (16 more variables)


[5 generation increasing temperature experiment data] - Cyprinodon variegatus offspring growth rate from 5 generation increasing temperature experiments conducted on Atlantic wild caught specimens during 2014. (Beyond maternal effects: Transgenerational plasticity in thermal performance)

Summary:
Cyprinodon variegatus offspring growth rate from 5 generation increasing temperature experiments conducted on Atlantic wild caught specimens during 2014.

cdm_data_type = Other
VARIABLES:
Generation (unitless)
P_Temp (degree Celsius)
F1_Temp (degree Celsius)
F2_Temp (degree Celsius)
F3_Temp (degree Celsius)
F4_Temp (degree Celsius)
F5_Temp (degree Celsius)
T_Day (unitless)
Sex (unitless)
WK2 (centimeters)
GR_8WK (GR 8 WK, centimeters per week)
AgeMaturation (Age Maturation, count)


[57Fe Wall Loss Experiment] - 57Fe Wall Loss Experiment data collected as part of a method development study investigating the precipitation and wall loss of labeled 57Fe when added to M9 Minimal Media (EAGER: Iron-Virus Interactions in the Ocean)

Summary:
This data was collected as part of a method development study investigating the precipitation and wall loss of labeled \u2075\u2077Fe when added to M9 Minimal Media, which is used to grow the model bacterial species Escherichia coli. The bulk media was prepared with the same components and a portion was treated with Chelex-100 to remove metals, while the other portion remained un-chelexed. Half of each treatment was spiked with labeled \u2075\u2077Fe and either 0.2 \u03bcm or 0.02 \u03bcm filtered for comparison of the dissolved and soluble fractions. The \u2075\u2077Fe content was monitored over four time points for one week in a shaking incubator, under the same conditions used to culture E. coli for labeling experiments.

cdm_data_type = Other
VARIABLES:
DATE (unitless)
SAMPLE_ID (unitless)
DESCRIPTION (unitless)
CHELEX (unitless)
Fe57_SPIKE (micromolar (uM))
FILTER_SIZE (micrometers (um))
DAY (days)
Fe56 (nanomolar (nM))
Fe57 (nanomolar (nM))
Fe57_to_Fe56 (unitless (percentage))
NOTES (unitless)


[[DEPRECATED] AT37-13 Hard Substrata Sampling Locations] - [DEPRECATED] Locations of hard substrata collected during R/V Atlantis cruise AT37-13 in the Pacific Ocean off Costa Rica from May to June 2017 (Collaborative research: Quantifying the biological, chemical, and physical linkages between chemosynthetic communities and the surrounding deep sea)

Summary:
Locations of hard substrata collected during R/V Atlantis cruise AT37-13 in the Pacific Ocean off Costa Rica from May to June 2017

cdm_data_type = Other
VARIABLES:
sample (unitless)
dive_samplenumber (unitless)
latitude (degrees_north)
longitude (degrees_east)
site (unitless)
cruise (unitless)


[[DEPRECATED] AT37-13 Push Core Sampling Locations] - [DEPRECATED] Locations of sediment push cores collected during R/V Atlantis cruise AT37-13 in the Pacific Ocean off Costa Rica from May to June 2017 (Collaborative research: Quantifying the biological, chemical, and physical linkages between chemosynthetic communities and the surrounding deep sea)

Summary:
Locations of sediment push cores collected during R/V Atlantis cruise AT37-13 in the Pacific Ocean off Costa Rica from May to June 2017

cdm_data_type = Other
VARIABLES:
sample (unitless)
dive_samplenumber (unitless)
latitude (degrees_north)
longitude (degrees_east)
site (unitless)
cruise (unitless)


[A scandium incubation experiment during the PUPCYCLE I cruise in the California Current System in 2019] - Dissolved and particulate Fe and Sc concentrations, chlorophyll, nutrients from a scandium incubation experiment during the PUPCYCLE I R/V Oceanus cruise 1905B in the California Current System in 2019 (CAREER: An integrated molecular and physiological approach to examining the dynamics of upwelled phytoplankton in current and changing oceans)

Summary:
We performed an incubation experiment with added dissolved scandium and/or iron in waters sampled in the California Current System during the PUPCYCLE I cruise in 2019 with Chief Scientist Adrian Marchetti. PUPCYCLE I (Phytoplankton response to the UPwelling CYCLE) took place in summer 2019 onboard the R/V Oceanus (OC 1905b). Water for the incubation was collected from 15 m just off the Big Sur coast 2 June 2019. This was in a region with an extremely narrow shelf. There were five total treatments run in triplicate: control (no addition), +5 nmol/kg dissolved Fe, +5 nmol/kg dissolved Sc, +5 nmol/kg dissolved Fe and +5 nmol/kg dissolved Sc, and filtered seawater with +5 nmol/kg dissolved Fe and +5 nmol/kg dissolved Sc. After 24 hours incubating, the incubation was harvested and analyzed for chlorophyll, nutrients, and dissolved and particulate Fe and Sc concentrations. The effort was to investigate similarities and differences in the oceanic chemical cycling of Fe and Sc.

cdm_data_type = Other
VARIABLES:
Label (unitless)
Timepoint (hours)
Treatment (unitless)
Replicate (unitless)
Chl_gt_5um (micrograms per liter (ug/L))
Chl_gt_0pt7um (micrograms per liter (ug/L))
NO3 (micromolar (uM))
PO4 (micromolar (uM))
SiO2 (micromolar (uM))
dissolved_Fe (nanomoles per kilogram (nmol/kg))
dissolved_Sc (picomoles per kilogram (pmol/kg))
dissolved_Sc_flag (unitless)


[A. pisonii: behavior] - Proportion of time the mangrove tree crab Aratus pisonii spent in different behaviors related to diet and energy storage (Cannizzo et al, (2018) Ecol & Evol.) (Linking Variation in Metabolic Processes as a Key to Prediction)

Summary:
This dataset includes behavioral observations of individual mangrove tree crabs, Aratus pisonii: the proportion of time spent sitting, moving, feeding, or not visible. Size and sex of the crabs, water temperature, and tidal period of the observations were also recorded. Crabs were collected near Fort Pierce, Florida from a dock area and released into one of three habitats: mangrove, saltmarsh or under the dock.

cdm_data_type = Other
VARIABLES:
Year (unitless)
ID (unitless)
Habitat (unitless)
ISO_Date (unitless)
Site (unitless)
Crab (unitless)
CW (millimeters (mm))
Sex (unitless)
Tide (Sea Surface Height, unitless)
Temp (Temperature, degrees Celsius)
totduration (minutes)
Sitting (unitless)
Moving (unitless)
Feeding (unitless)
Invisible (unitless)


[A. pisonii: clutch size] - Clutch size of the mangrove tree crab A. pisonii from three habitats: mangrove, saltmarsh and mangrove (Linking Variation in Metabolic Processes as a Key to Prediction)

Summary:
This dataset includes clutch size of the mangrove tree crab A. pisonii from three habitats: mangrove, saltmarsh and mangrove.

cdm_data_type = Other
VARIABLES:
ID (unitless)
ISO_Date (unitless)
Habitat (unitless)
Site (unitless)
CW (millimeters (mm))
GW (millimeters (mm))
GW_CW (unitless)
FB_WB (grams)
FB_Wet (grams)
FB_Dry (grams)
Full_Brood (grams)
Sub_WB (grams)
Sub_Dry (grams)
Sub (grams)
Count (eggs)
Egg_Weight (grams)
Fecund (eggs)
Log_Fec (unitless)
Log_CW (unitless)
Log_Fec_Log_CW (unitless)
Fec_CW (unitless)


[A. pisonii: dissections] - Physiological parameters derived from dissection of mangrove crabs, A. pisonii, from three habitats along Florida's east coast in 2015 and 2016 (Linking Variation in Metabolic Processes as a Key to Prediction)

Summary:
This dataset includes multiple physiological parameters derived from dissection of mangrove tree crabs, A. pisonii, from three habitats: mangrove, saltmarsh and mangrove.

cdm_data_type = Other
VARIABLES:
Habitat (unitless)
ID (unitless)
Site (unitless)
Year (unitless)
ISO_Date (unitless)
Tide (Sea Surface Height, unitless)
Sex (unitless)
Gravid (unitless)
CW (mm)
GW (mm)
GV (mm3)
GW_CW (unitless)
S_WB (grams)
S_Dry (grams)
S (grams)
F_WB (grams)
F_Dry (grams)
F (grams)
G_WB (grams)
G_Dry (grams)
G (grams)
H_WB (grams)
H_Dry (grams)
H (grams)
GT_WB (grams)
GT_Dry (grams)
... (7 more variables)


[A. pisonii: dock-marsh thermal] - Thermal readings from under a dock and in a nearby salt marsh (Cannizzo et al, (2018) Ecol & Evol.) (Linking Variation in Metabolic Processes as a Key to Prediction)

Summary:
This dataset includes temperature readings from under a dock and in a nearby salt marsh near Fort Pierce, Florida for a study of mangrove tree crabs, Aratus pisonii.

cdm_data_type = Other
VARIABLES:
Location (unitless)
Date (unitless)
time2 (Time, unitless)
ISO_DateTime_Local (ISO Date Time Local, degrees Celsius)
Temp (Temperature, Temp)


[A. pisonii: egg energy] - Energy content of mangrove crab, A. pisonii, eggs from three habitats along the Florida eastern coast, 2016 (Linking Variation in Metabolic Processes as a Key to Prediction)

Summary:
This dataset includes calculations of the energy content of eggs of mangrove tree crabs, A. pisonii, from three habitats: mangrove, saltmarsh and mangrove collected along the eastern Florida coast in 2016.

cdm_data_type = Other
VARIABLES:
ID (unitless)
ISO_Date (unitless)
Habitat (unitless)
Site (unitless)
CW (millimeters (mm))
GW (millimeters (mm))
GW_CW (unitless)
Egg_Stage (unitless)
Sample (unitless)
Pellet_W (grams)
Bomb (unitless)
Dish_Pre (grams)
Dish_Post (grams)
Temp_rise (degrees Celcius)
Fuse (unitless)
Corr_W (grams)
BombW (Bomb W, unitless)
E_Wcorr_kJ (E Wcorr K J, kiloJoules/gram (kJ/g))


[A. pisonii: egg fatty acids] - Fatty acid concentration extracted from A. pisonii eggs from three habitats along the Florida eastern coast, 2016 (Linking Variation in Metabolic Processes as a Key to Prediction)

Summary:
This dataset includes concentrations of fatty acids from eggs of mangrove tree crabs, A. pisonii, from three habitats: mangrove, saltmarsh and mangrove collected along the eastern Florida coast in 2016.

cdm_data_type = Other
VARIABLES:
Sample (unitless)
Habitat (unitless)
Site (unitless)
Year (unitless)
Month (unitless)
CW (millimeters)
GW_CW (unitless)
Egg_ug (micrograms)
C14_0 (micrograms)
C14_1 (micrograms)
C15_0 (micrograms)
C15_1 (micrograms)
C16_0 (micrograms)
C16_1 (micrograms)
C17_0 (micrograms)
C17_1 (micrograms)
C18_0 (micrograms)
C18_1n9 (micrograms)
cLA (C LA, micrograms)
tLA (T LA, micrograms)
GLA (micrograms)
ALA (micrograms)
C20_0 (micrograms)
C20_1n9 (micrograms)
EicoA (Eico A, micrograms)
... (37 more variables)


[A. pisonii: egg lipid and glycogen] - Lipid and glycogen content of A. pisonii eggs from three habitats along the Florida eastern coast, 2016 (Linking Variation in Metabolic Processes as a Key to Prediction)

Summary:
This dataset includes calculations of the lipid and glycogen content of eggs of mangrove tree crabs, A. pisonii, from three habitats: mangrove, saltmarsh and mangrove collected along the eastern Florida coast in 2016.

cdm_data_type = Other
VARIABLES:
Habitat (unitless)
Site (unitless)
ISO_Date (unitless)
ID (unitless)
CW (millimeters (mm))
GW (millimeters (mm))
GW_CW (unitless)
Egg_W (grams)
F_Vial (grams)
Vial_Lipid (grams)
Lipid (grams)
Lipid_wt (unitless)
Lipid_pct (unitless)
Glycogen_W (milligrams)
Glycogen_Conc (unitless)
Glycogen_pct (unitless)


[A. pisonii: sun-shade] - Proportion of time that mangrove tree crab Aratus pisonii spent in sun and shade in three habitats, 2015-2016. Cannizzo et al, (2018) Ecol & Evol. (Linking Variation in Metabolic Processes as a Key to Prediction)

Summary:
This dataset includes the proportion of time the mangrove crab, A. pisonii, spent in sun and shade in a mangrove, under a dock, and in a nearby salt marsh for a study of Aratus pisonii behavior. These data are presented in Cannizzo et al, (2018) Ecol & Evol.

cdm_data_type = Other
VARIABLES:
Year (unitless)
Habitat (unitless)
Site (unitless)
ISO_Date (unitless)
ID (unitless)
totduration (minutes)
Shade (unitless)
Sun (unitless)
Invisible (unitless)


[A. pisonii: thermal picture] - Thermal condition of A. pisonii in three habitats: under dock, mangroves, saltmarsh (Linking Variation in Metabolic Processes as a Key to Prediction)

Summary:
This dataset includes the crab body and air temperature readings from a
mangrove, under a dock, and in a nearby salt marsh for a study of mangrove
tree crabs, Aratus pisonii. Also reported are the proportion of time the crabs
spent in the sun, relative solar exposure\u00a0of each crab, and associated
parameters.

cdm_data_type = Other
VARIABLES:
Habitat (unitless)
Year (unitless)
ID (unitless)
time (ISO Date, seconds since 1970-01-01T00:00:00Z)
Site (unitless)
CW (millimeters (mm))
Sex (unitless)
Prop_Water (unitless)
Avg_Crab_Temp (degrees Celsius)
Temp_Day (degrees Celsius)
Sun_Prop (unitless)
Temp_Diff (degrees Celsius)
Solar (W/m2)
time2 (Time, minutes)
Time_S (seconds)
Solar_Time (watts*seconds/square meter [(W*s)/m2])


[AA-CSIA Olson] - Amino acid compound-specific isotope analysis (AA-CSIA) of tissue samples from four distinct trophic groups across the food web in the pelagic eastern tropical Pacific Ocean; samples collected on NOAA cruises from July to December 2006 (CAMEO 2009 - A novel tool for validating trophic position estimates in ecosystem-based fisheries models)

Summary:
Amino acid compound-specific isotope analysis (AA-CSIA) of tissue samples from four distinct trophic groups across the food web in the pelagic eastern tropical Pacific Ocean; samples collected on NOAA cruises from July to December 2006.

cdm_data_type = Other
VARIABLES:
species (unitless)
sample_number (unitless)
date_analyzed (unitless)
Alanine_Avg (parts per thousand (per mil, ‰))
Alanine_SD (parts per thousand (per mil, ‰))
Glycine_Avg (parts per thousand (per mil, ‰))
Glycine_SD (parts per thousand (per mil, ‰))
Threonine_Avg (parts per thousand (per mil, ‰))
Threonine_SD (parts per thousand (per mil, ‰))
Serine_Avg (parts per thousand (per mil, ‰))
Serine_SD (parts per thousand (per mil, ‰))
Valine_Avg (parts per thousand (per mil, ‰))
Valine_SD (parts per thousand (per mil, ‰))
Leucine_Avg (parts per thousand (per mil, ‰))
Leucine_SD (parts per thousand (per mil, ‰))
Isoleucine_Avg (parts per thousand (per mil, ‰))
Isoleucine_SD (parts per thousand (per mil, ‰))
Proline_Avg (parts per thousand (per mil, ‰))
Proline_SD (parts per thousand (per mil, ‰))
AsparticAcid_Avg (Aspartic Acid Avg, parts per thousand (per mil, ‰))
AsparticAcid_SD (Aspartic Acid SD, parts per thousand (per mil, ‰))
Methionine_Avg (parts per thousand (per mil, ‰))
Methionine_SD (parts per thousand (per mil, ‰))
GlutamicAcid_Avg (Glutamic Acid Avg, parts per thousand (per mil, ‰))
GlutamicAcid_SD (Glutamic Acid SD, parts per thousand (per mil, ‰))
... (10 more variables)


[Abalone Recruitment Modules] - Abalone recruitment data from Baja California and Baja California Sur, Mexico in 2019 (Collaborative Research: Evaluating how abalone populations in the California Current are structured by the interplay of large-scale oceanographic forcing and nearshore variability)

Summary:
Abalone support commercial and recreational fishery, however their population have decline dramatically since 1950's. To understand the recruitment of abalone populations, standarized abalone recruitment modules made of half cinder blocks inside cages were deployed in Baja California and Baja California Sur, Mexico. 12 cages were deployed at three sites (i.e., El Rosario, Isla Natividad and La Bocana) in Mexico. The abundances of abalone and invertebrates found in the cages were checked after 12months. This dataset presents all the information collected from the cages deployed at three sites (El Rosario, Isla Natividad and La Bocana) in Baja California and Baja California Sur, Mexico.

cdm_data_type = Other
VARIABLES:
date (unitless)
Site (unitless)
Bouy (unitless)
divers (unitless)
BART_transect (unitless)
number (unitless)
depth_f (Depth, feet (ft))
camera (unitless)
lat (degrees_north)
longitude (Long, degrees_east)
Organism_Identification (unitless)
Taxonomic_name (unitless)
Species_note (unitless)
individual_num (unitless)
size_mm (millimeters (mm))
size_mm_note (unitless)


[Abiotic data] - Physical environmental data from Little Lagoon, Alabama collected from 2012-2013. (Groundwater Discharge, Benthic Coupling and Microalgal Community Structure in a Shallow Coastal Lagoon)

Summary:
Physical environmental data from Little Lagoon, Alabama collected from 2012-2013.

cdm_data_type = Other
VARIABLES:
Year (unitless)
Date (unitless)
avg_sediment_chla (Concentration Of Chlorophyll In Sea Water, miligrams per m-2)
avg_sediment_chla_SE (Concentration Of Chlorophyll In Sea Water, miligrams per m-2)
avg_waterColumn_chla (Concentration Of Chlorophyll In Sea Water, ug L-1)
avg_waterColumn_chla_SE (Concentration Of Chlorophyll In Sea Water, ug L-1)
avg_temperature (Celsius)
avg_temperature_SE (Celsius)
avg_salinity (Sea Water Practical Salinity, PSU)
avg_salinity_SE (Sea Water Practical Salinity, PSU)
avg_waterColumn_Nox (Avg Water Column Nox, micromoles)
avg_waterColumn_Nox_SE (Avg Water Column Nox SE, micromoles)
avg_waterColumn_NH4 (Mole Concentration Of Ammonium In Sea Water, micromoles)
avg_waterColumn_NH4_SE (Mole Concentration Of Ammonium In Sea Water, micromoles)
avg_waterColumn_PO4 (Mass Concentration Of Phosphate In Sea Water, micromoles)
avg_waterColumn_PO4_SE (Mass Concentration Of Phosphate In Sea Water, micromoles)
Mouth_Temperature (Celsius)
East_Temperature (Celsius)
West_Temperature (Celsius)
Mouth_Salinity (Sea Water Practical Salinity, PSU)
East_Salinity (Sea Water Practical Salinity, PSU)
West_Salinity (Sea Water Practical Salinity, PSU)
Mouth_sediment_chla (Concentration Of Chlorophyll In Sea Water, miligrams per m-2)
Mouth_sediment_chla_SE (Concentration Of Chlorophyll In Sea Water, miligrams per m-3)
East_sediment_chla (Concentration Of Chlorophyll In Sea Water, miligrams per m-2)
East_sediment_chla_SE (Concentration Of Chlorophyll In Sea Water, miligrams per m-3)
West_sediment_chla (Concentration Of Chlorophyll In Sea Water, miligrams per m-2)
... (19 more variables)


[ABLE Subsurface 2016-18] - Subsurface data from ABLE deployments in the upwelling region of the west coast of northern California from 2016-2018 (Collaborative Research: Field test of larval behavior on transport and connectivity in an upwelling regime)

Summary:
Subsurface instrument data for each ABLE unit during each deployment, including environmental data records and logs of instrument actions such as pump strokes for changing buoyancy. ABLE instruments were deployed in the upwelling region of the west coast of northern California from 2016-2018.

cdm_data_type = Other
VARIABLES:
Deployment (unitless)
name (unitless)
Migration_model (unitless)
Migration_depth_1 (meters)
Migration_depth_2 (meters)
CUMSECS (seconds)
time (Date UTC, seconds since 1970-01-01T00:00:00Z)
Date_Local (unitless)
depth (m)
Target_Z (meters)
Z_Bot (meters)
Temp (Temperature, degrees Celsius)
PAR (Downwelling Photosynthetic Photon Radiance In Sea Water, moles per square meter per second (mol m?2 s?1))
Salin (practical salinity units)
Ang_VelX (Ang Vel X, ?)
Ang_VelY (Ang Vel Y, ?)
Ang_VelZ (Ang Vel Z, ?)
Pump_plus (unitless)
Pump_minus (unitless)
Gnd_switch_count (unitless)
fix_interval (hours)
aspe (meters per second (m/s))
xspe (meters per second (m/s))
spe (meters per second (m/s))
dir (degrees)
QA_flag (unitless)


[ABLE Surface 2016-18] - Surface data from ABLE deployments in the upwelling region of the west coast of northern California from 2016-2018 (Collaborative Research: Field test of larval behavior on transport and connectivity in an upwelling regime)

Summary:
Surface data from ABLE deployments in the upwelling region of the west coast of northern California from 2016-2018: GPS position locations for each ABLE unit during each deployment and other spatial data, as well as common fields describing the ABLE unit, deployment, and other identifiers for that data subset.

cdm_data_type = Other
VARIABLES:
Deployment (unitless)
name (unitless)
Migration_model (unitless)
depth (Migration Depth 1, m)
Migration_depth_2 (meters)
Fix_secs (seconds)
time (Date UTC, seconds since 1970-01-01T00:00:00Z)
Date_Local (unitless)
latitude (degrees_north)
longitude (degrees_east)
DOP (unitless)
Temp (Temperature, degrees Celsius)
PAR (Downwelling Photosynthetic Photon Radiance In Sea Water, moles per square meter per second (mol m?2 s?1))
Salin (practical salinity units)
Batt_V (volts)
Report_no (unitless)
fix_interval (hours)
aspe (meters per second (m/s))
xspe (meters per second (m/s))
spe (meters per second (m/s))
dir (degrees)
elapsed_time (hours)
d_pos_norm (meters per hour (m/h))
d_drop_norm (meters per hour (m/h))
... (8 more variables)


[ABLE] - Autonomous Behaving Lagrangian Explorer (ABLE) output for 5 taxonomic groups examined from the R/V Cape Horn in the upwelling region of the west coast of California, USA in August 2015 (Collaborative Research: Field test of larval behavior on transport and connectivity in an upwelling regime)

Summary:
Autonomous Behaving Lagrangian Explorer (ABLE) output for 5 taxonomic groups (Cyprid, Melibe, Pluteus, Pteropod, and Velella) from the R/V Cape Horn in the upwelling region of the west coast of California, USA in August 2015.

cdm_data_type = Other
VARIABLES:
taxon (unitless)
cumulative_secs (seconds)
date_utc (unitless)
time_utc (unitless)
Z (meters (m))
Z_flag (unitless)
target_Z (meters (m))
Z_bot (meters (m))
temp (Temperature, degrees Centigrade (C))
temp_flag (unitless)
PAR (Downwelling Photosynthetic Photon Radiance In Sea Water, moles per square meter per second (mol m-2 s-1))
PAR_flag (unitless)
sal (practical salinity scale (PSU))
sal_flag (unitless)
ang_vel_X (unitless (raw counts from the gyro))
ang_vel_Y (unitless (raw counts from the gyro))
ang_vel_Z (unitless (raw counts from the gyro))
pump_down (unitless)
pump_up (unitless)
latitude (degrees_north)
longitude (degrees_east)
DOP (unitless)
batt_V (volts)
time (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)


[Abyssal megafauna capture records] - Capture records of abyssal megafauna captured using submersibles and ROVs at Station ALOHA off Hawaii and Station M off California from 2019 to 2020 (Collaborative Research: Assessing the relative importance of small vs large particles as sources of nutrition to abyssal communities)

Summary:
This dataset includes the capture records for the abyssal megafauna captured as part of this food web project. Megafauna were captured using submersibles and ROVs at Station ALOHA off Hawaii and Station M off California from 2019 to 2020. These animals were captured as representatives of their abyssal food webs for an isotopic investigation of their original particulate nutritional sources (different sized particles). Each organism was identified, measured, most weighed using a motion compensated scale, and frozen for later drying and isotope analysis. For larger organisms such as holothurians or fishes, samples of tissues were taken and often the whole animal was preserved for later confirmation of taxonomic identification.

cdm_data_type = Other
VARIABLES:
Cruise_number (unitless)
sample_code (unitless)
Sample (unitless)
Station (unitless)
Station_Latitude (degrees_north)
longitude (Station_longitude, degrees_east)
local_date (unitless)
Type_of_organism (unitless)
species (unitless)
number (unitless)
Total_Length_cm (centimeters (cm))
Standard_Length_cm (centimeters (cm))
PreAnal_Fin_Length_cm (centimeters (cm))
Carapace_Length_mm (millimeters (mm))
Mass_g (grams (g))
sex (unitless)
Tissue_fin_clip (unitless)
Tissue_whole_body (unitless)
Tissue_white_muscle (unitless)
Tissue_gut_removed (unitless)
... (9 more variables)


[Acanthaster behavioral observation data] - Behavioral observation data of tagged and untagged Acanthaster in Viti Levu, Fiji from 2010-2012 (Killer Seaweeds: Allelopathy against Fijian Corals)

Summary:
Behavioral observation data of tagged and untagged Acanthaster in Viti Levu, Fiji from 2010-2012

cdm_data_type = Other
VARIABLES:
acanthaster_ID (unitless)
tagging_status (unitless)
righting_time_trial1 (seconds)
righting_time_trial2 (seconds)
righting_time_trial3 (seconds)
mean_righting_time (seconds)
righting_trial_date (unitless)
date_coral_offered (unitless)
coral_eaten (unitless)
date_coral_eaten (unitless)


[Acanthaster movement distance and direction] - Movement distance and direction data of tagged Acanthaster in Viti Levu, Fiji from 2010-2012. (Killer Seaweeds: Allelopathy against Fijian Corals)

Summary:
Movement distance and direction data of tagged Acanthaster in Viti Levu, Fiji from 2010-2012.

cdm_data_type = Other
VARIABLES:
village (unitless)
border (unitless)
acanthaster_origin (unitless)
acanthaster_ID (unitless)
consecutive_days (days)
total_displacement (meters)
mean_displacement (meters)
initial_movement_angle (degrees)
initial_movement_direction (unitless)
final_movement_angle (degrees)
final_movement_direction (unitless)


[Acanthaster tagging locations] - GPS location coordinates of Acanthaster individuals used in a tagging study in Viti Levu, Fiji from 2010-2012 (Killer Seaweeds: Allelopathy against Fijian Corals)

Summary:
GPS location coordinates of Acanthaster individuals used in a tagging study in Viti Levu, Fiji from 2010-2012

cdm_data_type = Other
VARIABLES:
village (unitless)
border (unitless)
acanthaster_ID (unitless)
date (unitless)
latitude (degrees_north)
longitude (degrees_east)


[accessory transects] - Summed coral cover along the four accessory transects in St. John from 1989 to 2017 (RUI-LTREB Renewal: Three decades of coral reef community dynamics in St. John, USVI: 2014-2019)

Summary:
These files contain data that support an analysis of the effects of two major hurricanes on coral reefs that have been extensively studied for more than three decades. Major tropical storms are destructive phenomena with large effects on the community dynamics of multiple biomes. On coral reefs, their impacts have been described for decades, leading to the expectation that future storms should have effects similar to those recorded in the past. This expectation relies on the assumption that storm intensities will remain unchanged, and the impacted coral reef communities are similar to those of the recent past; neither assumption is correct. These data support a study quantifying the effects of two category five hurricanes on the reefs of St. John, US Virgin Islands, where 31 y of time-series analyses reveal chronic coral mortality, increasing macroalgal abundance, and five major hurricanes that caused acute coral mortality. Contextualized by these trends, the effects of the most recent storms, Hurricanes Irma and Maria (September 2017), on coral cover were modest. While mean absolute coral cover declined 1\u20134% depending on site, these effects were not statistically discernable. Following decades of increasing abundance of macroalgae, this functional group responded to the  recent hurricanes with large increases in abundance on both absolute and relative scales. Decades of chronic mortality have changed the coral assemblages of St. John to create degraded communities that are resistant to severe storms.

cdm_data_type = Other
VARIABLES:
Transect_num (unitless)
Quadrat_num (unitless)
Coral_1989 (percent)
Coral_1995 (percent)
Coral_1996 (percent)
Coral_Jul_17 (percent)
Coral_Nov_17 (percent)


[Acropora cervicornis bleaching sequences] - Sequences from the coral Acropora cervicornis determined before and after bleaching at the Mote Marine Laboratory in August and September 2015 (Collaborative Research: Tracking the interacting roles of the environment, host genotype, and a novel Rickettsiales in coral disease susceptibility)

Summary:
This dataset contains information about sequences of coral the Acropora cervicornis collected from host colonies (genets) at the Mote Marine Laboratory in situ coral nursery in Looe Key, Lower Florida Keys, USA in August and September of 2015. The sequence data can be found in the National Center for Biotechnology Information (NCBI) Sequence Read Archive (SRA) database under accession number SRP267474 with the associated BioProject PRJNA639601.

cdm_data_type = Other
VARIABLES:
bioproject_accession (unitless)
sample_name (unitless)
SRA_run_ID (unitless)
SRA_study_ID (unitless)
SRA_title (unitless)
library_strategy (unitless)
library_source (unitless)
library_selection (unitless)
library_layout (unitless)
platform (unitless)
instrument_model (unitless)
design (unitless)
filetype (unitless)
filename (unitless)
filetype2 (unitless)
filename2 (unitless)
site (unitless)
collection_date (unitless)
lat (degrees_north)
longitude (degrees_east)
Host_organism (unitless)
genotype (unitless)
bleach_status (unitless)


[Acropora cervicornis buoyant weight 2016] - Acropora cervicornis growth rates under different pH and temperature treatments from experiments at Summerland Key, Florida in September of 2016 (CAREER: Applying phenotypic variability to identify resilient Acropora cervicornis genotypes in the Florida Keys)

Summary:
This dataset contains Acropora cervicornis buoyant weight measurements from different pH and temperature treatments. The experiments were conducted in tanks at Summerland Key, Florida (24.6616,-81.4538) with corals from a nursery located near Looe Key Reef (24.5636, -81.2786).  Experiments were conducted from July to September of 2016.

cdm_data_type = Other
VARIABLES:
tank (unitless)
pH (unitless)
Temp (Temperature, Celsius)
genotype (unitless)
July_mass (grams)
August_mass (Wind Speed Of Gust, grams)
September_mass (grams)


[Acropora cervicornis calcification rates] - Acropora cervicornis growth rates under different pH and temperature treatments from experiments at Summerland Key, Florida in September of 2016 (CAREER: Applying phenotypic variability to identify resilient Acropora cervicornis genotypes in the Florida Keys)

Summary:
This dataset contains Acropora cervicornis calcification data from experiments conducted in tanks at Summerland Key, Florida (24.6616,-81.4538) between 2016-09-02 and 2016-09-10 with corals from a nursery located near Looe Key Reef (24.5636, -81.2786).

cdm_data_type = Other
VARIABLES:
pH (unitless)
Temp (Temperature, Celsius)
Tank (unitless)
Chamber (unitless)
Genotype (unitless)
Cycle (unitless)
Calcification (micromoles of calcium carbonate per centimeter squred per hour (CaCO3/cm2/h))
Date (unitless)


[Acropora cervicornis photosynthesis and respiration rates] - Acropora cervicornis photosynthesis and respiration rates under different pH and temperature treatments from experiments at Summerland Key, Florida in September of 2016 (CAREER: Applying phenotypic variability to identify resilient Acropora cervicornis genotypes in the Florida Keys)

Summary:
This dataset contains oxygen change rates under dark and light conditions from 12 Acropora cervicornis genotypes previously exposed to different pH and temperature treatments. The coral surface area during photosynthesis and respiration experiments is included.  The experiments were conducted in tanks at Summerland Key, Florida (24.6616,-81.4538) between 2016-09-02 and 2016-09-10 with corals from a nursery located near Looe Key Reef (24.5636, -81.2786).

cdm_data_type = Other
VARIABLES:
date (unitless)
O2_rate_dark (micromoles of oxygen per hour (umol/h))
O2_rate_light (micromoles of oxygen per hour (umol/h))
genotype (unitless)
tank (unitless)
temp (Temperature, Celsius)
pH (unitless)
area (centimeters squared (cm2))


[Acropora cervicornis white band exposure experiment survival outcomes] - Acropora cervicornis genomic/trancriptomic sequence accessions with associated data on tank exposure to white band disease and survival outcomes with corals collected from Florida, USA and Bocas del Toro, Panama in 2021 (Multi-omic bases of coral disease resistance)

Summary:
Genomic data was collected from 96 Acropora cervicornis samples, 48 of which were collected from the Coral restoration foundation nursery in Florida in June 2021 and the other 48 were collected from Bocas del Toro Panama in November 2021. All samples were sequenced using illumina short read sequencing to create whole genome sequencing profiles of the DNA with one of the Florida samples, the K2 genotype, being sequenced using additional Nanopore long reads to assemble and annotate an A. cervicornis genome. All genotypes were used in a disease exposure assay to assess individual genotype disease resistance with a further, 16 colonies from Florida being sequenced at two timepoints across disease exposed and healthy colonies (total 48 sequences) using RNAseq to identify patterns in differential gene expression based on disease resistance.

This dataset includes sample metadata, treatment information, and disease state for corals in the exposure experiment. Sample metadata and accession identifiers for sequences at The National Center for Biotechnology Information (NCBI) are included as a supplemental file.

cdm_data_type = Other
VARIABLES:
Tank (untiless)
Treatment (untiless)
Location (untiless)
Genotype (untiless)
Day_1_AM (untiless)
Day_1_PM (untiless)
Day_2_AM (untiless)
Day_2_PM (untiless)
Day_3_AM (untiless)
Day_3_PM (untiless)
Day_4_AM (untiless)
Day_4_PM (untiless)
Day_5_AM (untiless)
Day_5_PM (untiless)
Day_6_AM (untiless)
Day_6_PM (untiless)
Day_7_AM (untiless)


[Adaptation in fishing communities VTR 1997-2014] - Changes in groundfish fishing communities in the northeast US from 1997-2014 as captured in the vessel trip report (VTR) data collected by the National Oceanic and Atmospheric Administration National Marine Fisheries Service (NOAA-NMFS-NEFSC) (Adaptations of fish and fishing communities to rapid climate change)

Summary:
This dataset describes changes in groundfish fishing communities in the northeast US from 1997-2014 as captured in the vessel trip report (VTR) data collected by the National Oceanic and Atmospheric Administration National Marine Fisheries Service Northeast Fisheries Science Center (NOAA-NMFS-NEFSC).

cdm_data_type = Other
VARIABLES:
community (unitless)
size (unitless)
km_shift (kilometers (km))
still_extant (unitless)
last_year (unitless)
sw_mean (unitless)
species_percent (unitless)


[ADCP FidalgoBay - July 2017] - Time series of horizontal and vertical current profiles collected from an upward-facing acoustic Doppler current profiler (ADCP) in Fidalgo Bay, WA during July 2017 (RUI: Will climate change cause 'lazy larvae'? Effects of climate stressors on larval behavior and dispersal)

Summary:
This dataset is a time series of horizontal and vertical current profiles collected from an upward-facing acoustic Doppler current profiler in Fidalgo Bay, WA during July 2017. These data were published in the following Masters Thesis: McIntyre, Brooke A., \Vertical Distribution of Olympia oyster (Ostrea lurida) larvae in Fidalgo Bay, WA\ (2018). WWU Graduate School Collection. 694. https://cedar.wwu.edu/wwuet/694

cdm_data_type = Other
VARIABLES:
latitude (degrees_north)
longitude (degrees_east)
time (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)
month (unitless)
day (unitless)
year (unitless)
time_PT (unitless)
pitch (degrees)
roll (degrees)
temp_c (degrees Celsius)
u_1 (meters/second)
u_1_3 (meters/second)
u_1_6 (meters/second)
u_1_9 (meters/second)
u_2_2 (meters/second)
u_2_5 (meters/second)
u_2_8 (meters/second)
u_3_1 (meters/second)
u_3_4 (meters/second)
u_3_7 (meters/second)
u_4 (meters/second)
u_4_3 (meters/second)
u_4_6 (meters/second)
... (62 more variables)


[ADCP Lake Michigan 2018] - Velocity observations from a mooring at Station AT55 in Lake Michigan from 2018-04-05 to 2018-04-20 (Collaborative Research: Regulation of plankton and nutrient dynamics by hydrodynamics and profundal filter feeders)

Summary:
A fixed mooring was established to measure water column velocities in Lake Michigan near Milwaukee, WI, during 2018 from April 5 \u2013 April 20, 2018 at a 55m depth site.  The mooring involved a large tripod, upon which two ADCPs (Nortek Aquadopp HR profiler and Nortek Signature 500) were mounted to measure water column velocities between 13cm and 5087cm above the bed.

cdm_data_type = Other
VARIABLES:
HAB_cm (centimeters (cm))
HAB_m (meters (m))
latitude (degrees_north)
longitude (degrees_east)
component (unitless)
filename (unitless)
time (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)
vel (meters per second (m/s))


[ADCP_5minute] - Five minute ADCP data from ARSV Laurence M. Gould and RVIB Nathaniel B. Palmer cruises to the Southern Ocean from 2001-2003 as part of the Southern Ocean GLOBEC project. (U.S. GLOBEC Southern Ocean)

Summary:
Five minute ADCP data from ARSV Laurence M. Gould and RVIB Nathaniel B. Palmer cruises to the Southern Ocean from 2001-2003 as part of the Southern Ocean GLOBEC project.

cdm_data_type = Other
VARIABLES:
cruiseid
year_start (unitless)
month_start (MM)
day_start (dd)
time_start (HHmm.m)
year_end (unitless)
month_end (MM)
day_end (dd)
time_end (HHmm.m)
yrday0_utc (YYY.Y)
latitude (degrees_north)
longitude (degrees_east)
depth (m)
u_m (m/sec)
v_m (m/sec)


[ADCP_hourly] - Hourly ADCP data from ARSV Laurence M. Gould and RVIB Nathaniel B. Palmer cruises to the Southern Ocean from 2001-2003 as part of the Southern Ocean GLOBEC project. (U.S. GLOBEC Southern Ocean)

Summary:
Hourly ADCP data from ARSV Laurence M. Gould and RVIB Nathaniel B. Palmer cruises to the Southern Ocean from 2001-2003 as part of the Southern Ocean GLOBEC project.

cdm_data_type = Other
VARIABLES:
cruiseid
year_start (unitless)
month_start (mm)
day_start (dd)
time_start (HHmm.m)
year_end (unitless)
month_end (mm)
day_end (dd)
time_end (HHmm.m)
yrday0_utc (YYY.Y)
latitude (degrees_north)
longitude (degrees_east)
depth (m)
u_m (m/sec)
v_m (m/sec)


[ADCP_Weicker] - Current velocities from ADCP from an R/V Lowell Weicker cruise in Fisher's Island Sound (NY/CT) in May 2012 (Diversity and dynamics of planktonic ciliates - what can next-generation sequencing technologies tell us?)

Summary:
This dataset contains northward and eastward components of current velocity measured by Acoustic Doppler Current Profiler (ADCP). Velocity components are given at every 0.5 meter depth.

cdm_data_type = Other
VARIABLES:
month_local (unitless)
day_local (unitless)
year (unitless)
sta (unitless)
cast (unitless)
time_start_local (HHMM.mm)
latitude (degrees_north)
longitude (degrees_east)
ISO_DateTime_Local (ISO Date Time Local, unitless)
time_diff (hours)
depth (m)
u_m (m/s)
v_m (m/s)


[Adult black sea bass winter survival and lipid dynamics: Laboratory-mesocosm experiment] - Adult Black Sea Bass (Centropristis striata) winter survival and lipid accumulation under varying diet and temperature conditions from a laboratory mesocosm experiment (Oct 2022 to Apr 2023) with individuals collected in Long Island Sound (Collaborative research: The genomic underpinnings of local adaptation despite gene flow along a coastal environmental cline)

Summary:
This dataset contains measurements from a laboratory mesocosm experiment (Oct 2022 to Apr 2023) with adult Black Sea Bass (Centropristis striata) collected in Long Island Sound.  Fish in this experiment were collected concurrently with fish sampled for a related wild-caught dataset (see 'Related Datasets' section).

Study description:

We experimentally examined overwintering potential of adult Black Sea Bass (Centropristis striata), an ecologically and economically important fish that seasonally migrates from offshore overwintering grounds to coastal feeding and nursery areas. We collected adults from Long Island Sound in September 2022 and reared them in a laboratory-mesocosm experiment under a contemporary seasonal temperature profile for Long Island Sound (LIS; October 2022 – April 2023) to assess their potential to survive and accumulate lipids throughout the winter. We also fed experimental adults two diet items (blue mussels and Atlantic herring), which are commonly found in Long Island Sound.

In addition, we sampled fish from the same reef in LIS at the start (October) and end (April) of the experiment to identify lipid dynamics in wild fish that migrate offshore (see "Related Datasets" section for wild fish data). Experimental C. striata growth throughout the winter was negligible with high mortality (> 50% observed).

While survivors fed herring had higher tissue lipid contents, mortality was 2x higher than for fish fed mussels. In contrast, to the experimental fish, wild-captured fish in the spring had higher gonadosmatic indices than that for survivors across both diet treatments, which was most similar to fall-captured fish. While some fish survived throughout the winter, current winter bottom temperatures still preclude a year-round C. striata presence within Long Island Sound. Overwintering inshore is still disadvantageous compared to seasonally migrating due to surviving experimental fish having lower gonadosomatic indices, suggesting that the offshore overwintering period is a time to build energy reserves. However, as coastal waters continue to warm, changing conditions could lead populations to become year-round residents of Long Island Sound, thus increasing C. striata abundance.

cdm_data_type = Other
VARIABLES:
Species (unitless)
... (44 more variables)


[Adult black sea bass winter survival and lipid dynamics: Wild fish] - Adult Black Sea Bass (Centropristis striata) winter survival and lipid accumulation in wild-caught fish in Long Island Sound in Sept of 2022 to Apr of 2023 (Collaborative research: The genomic underpinnings of local adaptation despite gene flow along a coastal environmental cline)

Summary:
This dataset contains adult Black Sea Bass (Centropristis striata) winter survival and lipid accumulation in wild-caught fish in Long Island Sound (September 2022 to April 2023). This dataset includes data from fish collected concurrently with those used in a related mesocosm experiment (run Oct 2022 to Apr 2023), with fish collected at the same reef (see 'Related Datasets' section).

Study description:

We experimentally examined overwintering potential of adult Black Sea Bass (Centropristis striata), an ecologically and economically important fish that seasonally migrates from offshore overwintering grounds to coastal feeding and nursery areas. We collected adults from Long Island Sound in September 2022 and reared them in a laboratory-mesocosm experiment under a contemporary seasonal temperature profile for Long Island Sound (LIS; October 2022 – April 2023) to assess their potential to survive and accumulate lipids throughout the winter. We also fed experimental adults two diet items (blue mussels and Atlantic herring), which are commonly found in Long Island Sound.

In addition, we sampled fish from the same reef in LIS at the start (October) and end (April) of the experiment to identify lipid dynamics in wild fish that migrate offshore. Experimental C. striata growth throughout the winter was negligible with high mortality (> 50% observed).

While survivors fed herring had higher tissue lipid contents, mortality was 2x higher than for fish fed mussels. In contrast, to the experimental fish, wild-captured fish in the spring had higher gonadosmatic indices than that for survivors across both diet treatments, which was most similar to fall-captured fish. While some fish survived throughout the winter, current winter bottom temperatures still preclude a year-round C. striata presence within Long Island Sound. Overwintering inshore is still disadvantageous compared to seasonally migrating due to surviving experimental fish having lower gonadosomatic indices, suggesting that the offshore overwintering period is a time to build energy reserves. However, as coastal waters continue to warm, changing conditions could lead populations to become year-round residents of Long Island Sound, thus increasing C. striata abundance.

cdm_data_type = Other
VARIABLES:
Species (unitless)
... (34 more variables)


[AE1620 bottles: Biogeochemical and Microbial data] - Nutrient concentrations and microbial counts from Niskin bottle collections on R/V Atlantic Explorer A1620 in the Bermuda Atlantic Time-series Study site from Sept 2016 (Dissolved Organic Carbon Cycling by SAR11 Marine Bacteria)

Summary:
Nutrient concentrations and microbial counts from Niskin bottle collections on R/V Atlantic Explorer A1620 in the Bermuda Atlantic Time-series Study site from Sept 2016.

cdm_data_type = Other
VARIABLES:
sample_id (unitless)
Cruise (unitless)
Cast (unitless)
Niskin (unitless)
date (unitless)
date_decyr (unitless)
time_UTC (unitless)
latitude (degrees_north)
longitude (degrees_east)
depth (m)
Temp (Temperature, degrees celsius)
CTD_S (pratical salinity units (PSU))
Pressure (decibars)
Sigma_theta (Sea Water Sigma Theta, kilogram/meter^3)
Conductivity (Sea Water Electrical Conductivity, Siemens per meter)
Fluor (milligram per Liter)
Par (Downwelling Photosynthetic Photon Radiance In Sea Water, micro-Einsteins/meter^2/second (uE/m^2/sec))
O2 (millimole per kilogram)
beam_trans_CStarTr0 (Beam Trans CStar Tr0, unitless)
NO3_NO2 (Mole Concentration Of Nitrate In Sea Water, millimole per Liter)
NO3_NO2_QF (Mole Concentration Of Nitrate In Sea Water, unitless)
PO4 (Mass Concentration Of Phosphate In Sea Water, millimole per Liter)
PO4_QF (Mass Concentration Of Phosphate In Sea Water, unitless)
POC_mg_L (milligram per Liter)
POC_mmol_L (millimole per Liter)
POC_QF (unitless)
... (11 more variables)


[AE1703 bottles: Biogeochemical and Microbial data] - Nutrient concentrations and microbial counts from Niskin bottle collections on R/V Atlantic Explorer A1703 in the Bermuda Atlantic Time-series Study site from Mar/April 2016 (Dissolved Organic Carbon Cycling by SAR11 Marine Bacteria)

Summary:
Nutrient concentrations and microbial counts from Niskin bottle collections on R/V Atlantic Explorer A1703 in the Bermuda Atlantic Time-series Study site from Mar/April 2016.

cdm_data_type = Other
VARIABLES:
sample_id (unitless)
Cruise (unitless)
Cast (unitless)
Niskin (unitless)
date (unitless)
date_decyr (unitless)
time_UTC (unitless)
latitude (degrees_north)
longitude (degrees_east)
depth (m)
Temp (Temperature, degrees celsius)
CTD_S (pratical salinity units (PSU))
Pressure (decibars)
Sigma_theta (Sea Water Sigma Theta, kilogram/meter^3)
Conductivity (Sea Water Electrical Conductivity, Siemens per meter)
Fluor (milligram per Liter)
Par (Downwelling Photosynthetic Photon Radiance In Sea Water, micro-Einsteins/meter^2/second (uE/m^2/sec))
O2 (millimole per kilogram)
beam_trans_CStarTr0 (Beam Trans CStar Tr0, unitless)
NO3_NO2 (Mole Concentration Of Nitrate In Sea Water, millimole per Liter)
NO3_NO2_QF (Mole Concentration Of Nitrate In Sea Water, unitless)
PO4 (Mass Concentration Of Phosphate In Sea Water, millimole per Liter)
PO4_QF (Mass Concentration Of Phosphate In Sea Water, unitless)
NH4 (Mole Concentration Of Ammonium In Sea Water, millimole per liter)
NH4_QF (Mole Concentration Of Ammonium In Sea Water, unitless)
POC_mg_L (milligram per Liter)
... (13 more variables)


[AE1812 Alkaline phosphatase] - Alkaline phosphatase activities for in situ and incubation samples from RV/Atlantic Explorer cruise AE1812 cruise transect from Bermuda to Rhode Island in May 2018. (Collaborative Research: Defining the biogeochemical drivers of diatom physiological ecology in the North Atlantic)

Summary:
This dataset reports alkaline phosphatase activities (APA) for 3 incubation runs and 33 in situ samples collected on RV/Atlantic Explorer cruise AE1812 in May 2018. The samples were collected between Bermuda and Rhode Island.

cdm_data_type = Other
VARIABLES:
incubation (unitless)
sample (unitless)
station (unitless)
cast (unitless)
date_harvest (unitless)
APA_nmolP_hr_liter (APA Nmol P Hr Liter, nanomol Phosphate/hour/liter [nmol P/h/L])
APA_nmolP_hr_ug_chla (APA Nmol P Hr Ug Chla, nanomol Phosphate/hour/microgram chlorophyll-a [nmol P/h/µg Chl a])
latitude (degrees_north)
longitude (degrees_east)


[AE1812 Redox data] - Redox data from RV/Atlantic Explorer AE1812 in the northwest Atlantic, May 2018 (Collaborative Research: Defining the biogeochemical drivers of diatom physiological ecology in the North Atlantic)

Summary:
This dataset includes redox data from RV/Atlantic Explorer AE1812 in the northwest Atlantic, May 2018.

cdm_data_type = Other
VARIABLES:
Station (unitless)
CTD_Cast (unitless)
Sample_type (unitless)
depth (m)
P33_PO4_incorp_PIII_rate (counts per minutes per liter per hour (cpm/(L h)))
P33_PO4_uptake (counts per minutes per liter per hour (cpm/(L h)))
P33_PO4_incorp_PIII_pcent (Mass Concentration Of Phosphate In Sea Water, percentage (%))


[AE1812 Water column phosphate data] - Water column phosphate data from RV/Atlantic Explorer AE1812, May 2018 (Collaborative Research: Defining the biogeochemical drivers of diatom physiological ecology in the North Atlantic)

Summary:
This dataset includes water column phosphate data from RV/Atlantic Explorer AE1812, May 2018.

cdm_data_type = Other
VARIABLES:
CTD_Cast (unitless)
Station (unitless)
time (seconds since 1970-01-01T00:00:00Z)
latitude (degrees_north)
longitude (degrees_east)
depth (m)
MAGIC_SRP (nmol per liter)
TPP (nmol per liter)


[AE1910 CTD Bottles] - Bottle data from R/V Atlantic Explorer cruise AE1910 during May 2019 (Collaborative Research: Diel physiological rhythms in a tropical oceanic copepod)

Summary:
Bottle data from R/V Atlantic Explorer cruise AE1910 during May 2019.

cdm_data_type = Other
VARIABLES:
cast (unitless)
latitude (degrees_north)
longitude (degrees_east)
Bottle (unitless)
Year (unitless)
Month (unitless)
Day (unitless)
Hours (unitless)
Minutes (unitless)
Seconds (unitless)
depth (Dep SM Avg, m)
DepSM_stdev (Dep SM Stdev, meters (m))
AltM_avg (Alt M Avg, meters (m))
AltM_stdev (Alt M Stdev, meters (m))
CStarTr0_avg (CStar Tr0 Avg, percent?)
CStarTr0_stdev (CStar Tr0 Stdev, percent?)
C0S_m_avg (C0 S M Avg, siemens per meter (S/m))
C0S_m_stdev (C0 S M Stdev, siemens per meter (S/m))
FlC_avg (Fl C Avg, micrograms per liter (ug/L))
FlC_stdev (Fl C Stdev, micrograms per liter (ug/L))
Sbeox0_avg (micromoles per kilogram (umol/kg))
Sbeox0_stdev (micromoles per kilogram (umol/kg))
Par_avg (?)
Par_stdev (?)
PrDE_avg (Pr DE Avg, psi)
PrDE_stdev (Pr DE Stdev, psi)
Sal00_avg (PSU)
... (8 more variables)


[AE1910 CTD Profiles] - CTD profiles from R/V Atlantic Explorer cruise AE1910 during May 2019 (Collaborative Research: Diel physiological rhythms in a tropical oceanic copepod)

Summary:
CTD profiles from R/V Atlantic Explorer cruise AE1910 during May 2019.

cdm_data_type = Other
VARIABLES:
cast (unitless)
latitude (degrees_north)
longitude (degrees_east)
time (ISO Date Time UTC Start, seconds since 1970-01-01T00:00:00Z)
depth (Dep SM, m)
AltM (Alt M, meters (m))
CStarTr0 (CStar Tr0, unitless (percent))
C0S_m (C0 S M, siemens per meter (S/m))
FlC (FL C, micrograms per liter (ug/L))
Sbeox0 (micromoles per kilogram (umol/kg))
PAR (Downwelling Photosynthetic Photon Radiance In Sea Water, ?)
PrDE (Pr DE, psi)
Sal00 (PSU)
T090C (T090 C, ITS-90, degrees C)
Sigma_e00 (kilograms per cubic meter (kg/m^3))
Flag (unitless)


[AE1910 MOCNESS Continuous] - Continuous MOCNESS data files from R/V Atlantic Explorer cruise AE1910 during May 2019 (Collaborative Research: Diel physiological rhythms in a tropical oceanic copepod)

Summary:
Continuous MOCNESS data files from R/V Atlantic Explorer cruise AE1910 during May 2019.

cdm_data_type = Other
VARIABLES:
tow (unitless)
date_start (unitless)
time_start (unitless)
time (ISO Date Time UTC Start, seconds since 1970-01-01T00:00:00Z)
cruise (unitless)
depth (Dep SM, m)
prDE (Pr DE, psi)
latitude (degrees_north)
longitude (degrees_east)
timeM (Time M, minutes)
flag (unitless)


[AE1910 MOCNESS Nets] - MOCNESS net data from R/V Atlantic Explorer cruise AE1910 during May 2019 (Collaborative Research: Diel physiological rhythms in a tropical oceanic copepod)

Summary:
MOCNESS net data from R/V Atlantic Explorer cruise AE1910 during May 2019.

cdm_data_type = Other
VARIABLES:
tow (unitless)
date_start (unitless)
time_start (unitless)
time (ISO Date Time UTC Start, seconds since 1970-01-01T00:00:00Z)
cruise (unitless)
Date (unitless)
time2 (Time, unitless)
TC (Temperature Correction, unitless)
FC (counts)
VOL (unitless)
Pres (Pressure, millibars (mb))
Angle (degrees)


[AE1913 Clio pigments] - Pigment concentration data from AUV Clio dives conducted during R/V Atlantic Explorer cruise AE1913 in the Sargasso Sea in June of 2019 (Collaborative Research: Direct Characterization of Adaptive Nutrient Stress Responses in the Sargasso Sea using Protein Biomarkers and a Biogeochemical AUV)

Summary:
Pigment concentration data from R/V Atlantic Explorer cruise AE1913 (June 2019) in which seawater was collected across a 1,050 km section in the western North Atlantic.

cdm_data_type = Other
VARIABLES:
SampleName (unitless)
latitude (degrees_north)
longitude (degrees_east)
depth (m)
pigment_abbr (unitless)
pigment_conc (nanograms per kilogram (ng/kg))


[AE1913 CTD data] - CTD profiles from R/V Atlantic Explorer cruise AE1913 in the Sargasso Sea in June of 2019 (Collaborative Research: Direct Characterization of Adaptive Nutrient Stress Responses in the Sargasso Sea using Protein Biomarkers and a Biogeochemical AUV)

Summary:
Oceanographic samples were collected onboard the R/V Atlantic Explorer between June 16th - 28th 2019, along a transect beginning at the Bermuda Atlantic Time-series Station (BATS) in the Sargasso Sea and terminating in northeast US continental shelf waters. The R/V Atlantic Explorer CTD provided physicochemical contextualization (temperature, oxygen, fluorescence, turbidity) and was deployed at all stations except the last one, St. 9, due to time restrictions.

cdm_data_type = Other
VARIABLES:
Cast (unitless)
time (Nmea_datetime_utc, seconds since 1970-01-01T00:00:00Z)
latitude (degrees_north)
longitude (degrees_east)
depth (m)
c1mS_cm (milliSiemens per centimeter (mS/cm))
c0mS_cm (milliSiemens per centimeter (mS/cm))
t090C (degrees Celsius (deg C))
prDM (Digiquartz (db))
sbeox0Mm_L (micromoles per liter (umol/l))
flC (Micrograms per liter (ug/l))
CStarTr0 (Percent (%))
sal00 (Practical Salinity Units (PSU))
flag (unitless)


[AE1913 Macronutrients, dissolved and particulate trace metals] - Macronutrients and dissolved and particulate trace metals collected from the R/V Atlantic Explorer cruise AE1913 in the Sargasso Sea in June of 2019 (Collaborative Research: Direct Characterization of Adaptive Nutrient Stress Responses in the Sargasso Sea using Protein Biomarkers and a Biogeochemical AUV)

Summary:
This data includes macronutrients and dissolved and particulate trace metals collected from the AE1913 expedition on the R/V Atlantic Explorer in June 2019. Seawater was collected with a trace metal rosette and filtered through a 0.2 um filter. Filtrate was used for nutrients and dissolved trace metals, and the filter was saved for the particulate metal analysis at select sites. Instruments used were a Alpkem Rapid Flow Analyzer, Technicon AutoAnalyzer II, and iCAP Q inductively coupled plasma mass spectrometer (ICP-MS). The goal of this analysis was to explore the relationship between trace metal/macronutrient availability and microbial metabolism across a section of the North Atlantic Ocean. This data was collected by Mak Saito and Natalie Cohen.

cdm_data_type = Other
VARIABLES:
Station (unitless)
Latitude (degrees_north)
longitude (degrees_east)
depth (m)
time (Datetime_deploy, seconds since 1970-01-01T00:00:00Z)
DateTime_recover (seconds since 1970-01-01T00:00:00Z)
dFe (nanomolar (nM))
dFeFlag (unitless)
dZn (nanomolar (nM))
dZnFlag (unitless)
dCd (nanomolar (nM))
dCdFlag (unitless)
dNi (nanomolar (nM))
dNiFlag (unitless)
dCu (nanomolar (nM))
dCuFlag (unitless)
dMn (nanomolar (nM))
dMnFlag (unitless)
PO4 (micromolar (uM))
NO2_NO3 (micromolar (uM))
... (9 more variables)


[AE1913 Protein Spectral Counts] - Scaffold-derived metaproteomic exclusive and total spectral counts associated with proteins from samples taken during R/V Atlantic Explorer cruise AE1913 from the Sargasso Sea to Northeast US shelf waters in June of 2019 (Collaborative Research: Direct Characterization of Adaptive Nutrient Stress Responses in the Sargasso Sea using Protein Biomarkers and a Biogeochemical AUV)

Summary:
These are the Scaffold-derived metaproteomic exclusive and total spectral counts associated with proteins.  Samples were taken during R/V Atlantic Explorer cruise AE1913 in Subtropical North Atlantic, beginning at the Bermuda Atlantic Time-series Station (BATS) of the Sargasso Sea  and ending in coastal Northeast US shelf waters in June of 2019.

cdm_data_type = Other
VARIABLES:
row_id (unitless)
protein_id (unitless)
kegg_id (unitless)
enzyme_comm_id (unitless)
protein_name (unitless)
pfams_id (unitless)
supergroup (unitless)
classification (unitless)
sample_id (unitless)
spectral_count (unitless)
cruise_id (unitless)
station_id (unitless)
depth (Depth_m, m)
minimum_filter_size_microns (microns (um))
maximum_filter_size_microns (microns (um))
date_y_m_d (unitless)
latitude (Latitude_dd, degrees_north)
longitude (Longitude_dd, degrees_east)


[AE1913 R2R ELOG] - Amended Rolling Deck to Repository (R2R) event log (ELOG) taken on the R/V Atlantic Explorer cruise AE1913 in the Sargasso Sea in June of 2019 (Collaborative Research: Direct Characterization of Adaptive Nutrient Stress Responses in the Sargasso Sea using Protein Biomarkers and a Biogeochemical AUV)

Summary:
The Electronic Logger (ELOG) tracked all deployments on the AE1913 cruise, including CTD, McLane pump, trace metal rosette, and AUV Clio deployment/recoveries, flow-through seawater sampling, sediment trap and plankton nets. Corresponding CTD files from each deployment are recorded in the "comments" column.

R/V Atlantic Explorer cruise AE1913 was conducted between June 16th - 28th, 2019 in the Sargasso Sea, beginning at Bermuda Atlantic Time-series Station (BATS) and ending in the northeast shelf of Woods Hole Oceanographic Institution (WHOI).

cdm_data_type = Other
VARIABLES:
Message_ID (unitless)
Date (unitless)
Event (unitless)
R2R_Event (unitless)
Instrument (unitless)
Action (unitless)
Transect (unitless)
Station (unitless)
Cast (unitless)
latitude (degrees_north)
longitude (degrees_east)
depth (Seafloor, m)
Author (unitless)
Comment (unitless)
Cruise (unitless)
dateTimeUTC (unitless)
GPS_Time (unitless)
dateTime8601 (unitless)
Revisions (unitless)


[AE1918 CTD Profiles] - Processed CTD (1 m binned) data from R/V Atlantic Explorer cruise AE1918 during July 2019 (Collaborative Research: Diel physiological rhythms in a tropical oceanic copepod)

Summary:
AE1918 was a cruise of opportunity on which two oceanographic sampling activities were conducted: a CTD cast and a MOCNESS net tow. These are the processed, binned CTD data.

cdm_data_type = Other
VARIABLES:
depth (Dep SM, m)
t090C (T090 C, degrees Celsius)
t190C (T190 C, degrees Celsius)
sal00 (PSU)
sal11 (PSU)
sigma_e00 (kilograms per cubic meter (kg/m^3))
sigma_e11 (kilograms per cubic meter (kg/m^3))
flC (FL C, micrograms per liter (ug/l))
flECO_AFL (Fl ECO AFL, milligrams per cubic meter (mg/m^3))
sbox0Mm_Kg (Sbox0 Mm Kg, micromoles per kilogram (umol/kg))
sbox1Mm_Kg (Sbox1 Mm Kg, micromoles per kilogram (umol/kg))
par (Downwelling Photosynthetic Photon Radiance In Sea Water, assumed to be umol (photons) m-2 s-1 (from manufacturer's data))
flag (unitless)


[AE1918 MOCNESS Continuous] - Continuous MOCNESS data files from R/V Atlantic Explorer cruise AE1918 during July 2019 (Collaborative Research: Diel physiological rhythms in a tropical oceanic copepod)

Summary:
AE1918 was a cruise of opportunity on which two oceanographic sampling activities were conducted: a CTD cast and a MOCNESS net tow. These are the continuous underway data from the MOCNESS tow.

cdm_data_type = Other
VARIABLES:
tow (unitless)
date_start (unitless)
time_start (unitless)
time (ISO Date Time UTC Start, seconds since 1970-01-01T00:00:00Z)
cruise (unitless)
time2 (Time, unitless)
pres (Pressure, decibars (dbar))
temp (Temperature, degrees Celsius)
theta (kilograms per cubic meter (Kg m-3))
sal (PSU)
sigma (kilograms per cubic meter (Kg m-3))
angle (degrees)
flow (counts)
hzvel (meters per second (m s-1))
vtvel (meters per second (m s-1))
vol (cubmic meters (m3))
net (unitless)
latitude (degrees_north)
longitude (degrees_east)
GPSTIME (unitless)
depth (CTDDEPTH, m)


[AE1918 MOCNESS Nets] - MOCNESS net data from R/V Atlantic Explorer cruise AE1918 in July 2019 (Collaborative Research: Diel physiological rhythms in a tropical oceanic copepod)

Summary:
AE1918 was a cruise of opportunity on which two oceanographic sampling activities were conducted: a CTD cast and a MOCNESS net tow. These are the net data from the MOCNESS tow.

cdm_data_type = Other
VARIABLES:
tow (unitless)
date_start (unitless)
time_start (unitless)
time (ISO Date Time UTC Start, seconds since 1970-01-01T00:00:00Z)
cruise (unitless)
Date (unitless)
time2 (Time, unitless)
TC (Temperature Correction, unitless)
FC (counts)
NewVol (New Vol, cubic meters (m^3))
Pres (Pressure, decibars (dbar))
Temp (Temperature, degrees Celsius)
Cond (PSU)
Salinity (Sea Water Practical Salinity, PSU)
Angle (degrees)


[Aerosol REE and Th-232 data from northern Gulf of Alaska region] - Concentrations of the rare earth elements (REE) and Thorium-232 (232Th) from the northern Gulf of Alaska region (Inferring trace element inputs to North Pacific surface waters from Alaskan and Asian dust)

Summary:
Concentrations of the rare earth elements (REE) and Thorium-232 (232Th) are presented for filtered air (dust) samples collected from the northern Gulf of Alaska region, including from Middleton Island (AK)(59.4214 N, 146.3493 W) and the Copper River delta  (60.4324 N, 145.0954 W). Size-fractionated samples were collected in November 2019, using a Tisch Volumetric Flow Controlled (VFC) high volume sampler (Tisch Environmental, TE-5170V- BL) outfitted with a Cascade impactor. The six size fractions collected ranged from <0.49 micrometers (um) to >7.2 um in diameter. This sampler technology is discussed in greater detail in Morton et al, 2013. Samples were filtered with acid-washed Whatman 41 (W41) cellulose fiber filters. Additional bulk dust samples were collected in October 2012, using a  Thermo Partisol Plus 2025 using Teflon filters. Samples were fully digested using concentrated nitric and hydrofluoric acids, following the approach of Morton et al, 2013. Samples were analyzed using a Thermofisher iCAP inductively coupled plasma mass spectrometer (ICP-MS) in KED mode, with He as a collision cell gas, adapted from the approach of Trommetter et al (2020). Concentrations were determined from standard curves using a REE ICP-MS standard from High-Purity Standards (that also contained 232Th). Three internal standards (Ge, In, and Bi) were added to both samples and standards, to correct for short-term variability in the instrument response and to evaluate stability of mass response during the ICP-MS run. Concentration estimates for the REE and 232Th were blank-corrected using full-process blanks that included filters deployed during times when there was no known dust deposition. Most of the full-process blank concentrations were 100 times or more smaller than the concentrations of our lowest standard (with the exception of Ce, the concentration of which was ~seven times smaller than our lowest standard. This means that our blank concentrations were very low but also not quantified extremely accurately. Our best estimates are that the full-process blanks, including filters, ranged from 0.02 picograms per square centimeter (pg cm-2) for Eu, Tb, and Ho, to 2 pg cm-2 for Ce. These blank concentrations were in all cases 40 times or more smaller than our lowest REE sample concentration for the <0.49 um size fraction with the smallest amount of dust, and ~3 orders of magnitude smaller than the signal of the largest samples. The REE data are also presented in a double-normalized format that first normalizes to concentrations of Post Archean Australian Shale and then normalizes to the mean REE concentration. The normalization approach is slightly modified from that of Serno et al, 2014.

cdm_data_type = Other
VARIABLES:
sample_description (unitless)
... (20 more variables)


[Algal Ash-Free Dry Weight - Cerro Mundo 2] - Nearshore Shallow Subtidal Macroalgal Preburn, Postburn and Ash-Free Dry Weight Data from October 2022 (Galapagos 2021 project) (Temperature Regulation of Top-Down Control in a Pacific Upwelling System)

Summary:
Increased standing macroalgal biomass in upwelling zones is generally assumed to be the result of higher nutrient flux due to upwelled waters, However, other factors can strongly impact macroalgal communities. For example, herbivory and temperature, via their effects on primary producers and the metabolic demands of consumers, can also influence macroalgal biomass and productivity, respectively.  Although there is a fair number of studies looking at the interactive effects of herbivores and nutrients in both tropical and temperate regions, there is a lack of studies looking at these effects in tropical or subtropical upwelling regions. The purpose of this study was to measure the effects that herbivores, temperature, and nutrient availability have on standing macroalgal biomass. We manipulated nutrient availability and herbivory in six field experiments during contrasting productivity and thermal regimes (cool-upwelling and warm, non-upwelling season) on a subtidal nearshore rocky reef.

Here, we present the macroalgal biomass raw data (Preburn, Postburn, and Ash-Free Dry Weight) collected in the nearshore shallow subtidal during an October 2022 field experiment.

cdm_data_type = Other
VARIABLES:
Cage (unitless)
Treatment (unitless)
N (unitless)
Algae_Type (unitless)
Foil_cup_weight_g (grams)
Sample_and_foil_cup_weight_g (grams)
Preburn_weight_calculation_g (grams)
Ceramic_cup_weight_g (grams)
Sample_and_ceramic_cup_weight_g (grams)
Postburn_weight_calculation_g (grams)
AFDW_Preburn_minus_Postburn_weight_calculation_g (grams)


[algal classes] - ChemTax based chl-a of algal groups from R/V Atlantic Explorer cruises AE1102, AE1118, AE1206, AE1219 in the Sargasso Sea, Bermuda Atlantic Time-Series Station (BATS) from 2011-2012 (Trophic BATS project) (Plankton Community Composition and Trophic Interactions as Modifiers of Carbon Export in the Sargasso Sea 	)

Summary:
ChemTax based chl-a of algal groups are reported from four cruises in the Sargasso Sea during 2011 and 2012.

cdm_data_type = Other
VARIABLES:
cruise_id (dimensionless)
date_gmt (unitless)
cast (dimensionless)
time_gmt (HHMM)
latitude (degrees_north)
longitude (degrees_east)
time (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)
depth (m)
sample (dimensionless)
size_fraction (micrometers)
cyanobacteria (micrograms of Chl-a per liter)
prasinophytes (micrograms of Chl-a per liter)
cryptophytes (micrograms of Chl-a per liter)
diatoms (micrograms of Chl-a per liter)
pelagophytes (micrograms of Chl-a per liter)
haptophytes (micrograms of Chl-a per liter)
dinoflagellates (micrograms of Chl-a per liter)


[Algal treatments] - Treatment description and growth parameters for Thalassiosira weissflogii generating d13C-AA, collected on R/V Meteor M77 in the Peruvian ocean margin from November to December 2008. (The Use of Nitrogen Isotopes of Amino Acids To Understand Marine Sedimentary 15N Records)

Summary:
Treatment description and growth parameters for Thalassiosira weissflogii generating d13C-AA, collected on R/V Meteor M77 in the Peruvian ocean margin from November to December 2008.

cdm_data_type = Other
VARIABLES:
ID (unitless)
Treatment (unitless)
Temp (Temperature, celsius)
Light (umol/square meter/second)
Light_cycle (D/L (h))
Salinity (Sea Water Practical Salinity, PSU)
pH_init (P H Init, pH)
pH_term (P H Term, pH)


[Alkalinity and dissolved inorganic carbon (DIC) from water samples collected at coral reefs in the equatorial central Pacific in 1973, 2012, 2015, and 2018] - Alkalinity and dissolved inorganic carbon (DIC) from sea water samples collected at coral reefs from equatorial central Pacific in 1973, 2012, 2015, and 2018 (The Biophysics of Coral Reef Resilience:  hydrodynamic and ecological drivers of coral survival under extreme heat)

Summary:
This dataset includes total alkalinity (TA) and dissolved inorganic carbon (DIC), along with water temperature and salinity, to characterize the carbonate chemistry in the vicinity of 5 coral reef islands in the equatorial central Pacific. Discrete water samples were collected from June  7 – 18, 2012 and from September 5 – 26, 2015 at Kanton (2.8°S, 171.7°W), Enderbury (3.1°S, 171.1°W), Rawaki (3.7°S, 170.7°W) and Nikumaroro (4.7°S, 174.5°W), and from May 5 – 23, 2018 at Kanton, Rawaki, Nikumaroro, and Orona (4.5°S, 172.2°W) and at several open ocean sites. Some of the 2012 and 2015 water samples were also analyzed for nitrate, ammonium, phosphate and silicate concentrations.
Also included in this dataset are TA, pH, DIC, salinity, and water temperature from samples collected from November 27 to December 4, 1973 at Kanton Island by Smith, S. V., and P. L. Jokiel (1978).

cdm_data_type = Other
VARIABLES:
time (Datetime_utc, seconds since 1970-01-01T00:00:00Z)
Datetime_local (unitless)
latitude (Lat_n, degrees_north)
longitude (Lon_e, degrees_east)
Site_description (unitless)
depth (m)
Temperature (degrees Celsius)
Salinity (practical salinity unit, psu)
TA (micromoles/kilogram)
DIC (micromoles/kilogram)
Nitrate (micromoles/liter)
Ammonium (micromoles/liter)
Ammonium_flag (dimensionless)
Phosphate (micromoles/liter)
Silicate (micromoles/liter)
pH (unitless)


[All taxa colonization counts] - Counts of colonists collected from colonization plates at the East Pacific Rise (EPR) deep-sea vents (1998-2017) (Effects of Disturbance and Larval Supply on Communities at Hydrothermal Vents)

Summary:
This dataset includes numbers of individuals of each species on each colonization surface. Gastropods only are presented, as they were identified definitively to species level. These data are published in Mullineaux et al (2012).

cdm_data_type = Other
VARIABLES:
Sieve_subsamples (unitless)
latitude (degrees_north)
longitude (degrees_east)
ID (unitless)
Site (unitless)
Zone (unitless)
cruise_id (unitless)
date_recovered (unitless)
Subsamples (unitless)
Temperature (degrees Celsius)
Bathymargarites_symplector (unitless)
Clypeosectus_delectus (unitless)
Ctenopelta_porifera (unitless)
Cyathermia_naticoides (unitless)
Eulepetopsis_vitrea (unitless)
Gorgoleptis_maybe_patulus (unitless)
Gorgoleptis_spiralis (unitless)
Gorgoleptis_emarginatus (unitless)
Lepetodrilus_cristatus (unitless)
Lepetodrilus_elevatus (unitless)
Lepetodrilus_ovalis (unitless)
Lepetodrilus_pustulosus (unitless)
Lepetodrilus_tevnianus (unitless)
Neomphalus_fretterae (unitless)
Pachydermia_laevis (unitless)
... (6 more variables)


[all_species_seen] - All the species seen during broad-scale cruises from the US-GLOBEC Georges Bank Program (U.S. GLOBEC Georges Bank)

Summary:
All the species seen during broad-scale cruises from the US-GLOBEC Georges Bank Program, 1993-1999.

cdm_data_type = Other
VARIABLES:
taxon_code
taxon


[allADCP] - ADCP 600 and 150 KHz 5 minute and 1 hour averages; along track and shallow and deep sites; from R/V Seward Johnson SJ9506 and SJ9508 cruises?in the Gulf of Maine and Georges Bankareas during 1995 (GB project) (U.S. GLOBEC Georges Bank)

Summary:
ADCP 600 and 150 KHz 5 minute and 1 hour averages; along track and shallow and deep sites; from R/V Seward Johnson SJ9506 and SJ9508 cruises?in the Gulf of Maine and Georges Bankareas during 1995 (GB project)

cdm_data_type = Other
VARIABLES:
cruiseid
beam (unknown)
frequency
site
bin
year
yrday_gmt (GMT)
latitude (degrees_north)
longitude (degrees_east)
press (decibars)
u (centimeters/second)
v (centimeters/second)


[Allometric scaling of calcification for Mytilus californianus] - Allometric scaling of calcification data for Mytilus californianus from 2021-2022 (OA decoupling project) (Invertebrate calcification and behavior in seawater of decoupled carbonate chemistry)

Summary:
Calcification rates of mussels spanning a range of sizes. These data were used to determine a biomass scaling function for the main incubation dataset (Incubation data for Mytilus californianus calcification).

cdm_data_type = Other
VARIABLES:
species (unitless)
AphiaID (unitless)
LSID (unitless)
date_local (unitless)
start_time_local (unitless)
ISO_Start_DateTime_UTC (unitless)
duration (hours (h))
salinity (PSU)
temperature (degrees Celcius (c))
calcification (umol hr^-1 g^-0.71592)
tissue_mass (grams (g))
shell_mass (grams (g))
wet_mass (grams (g))
TA (umol kg-1)
ph (unitless)
do (umol kg-1)
ci (umol kg-1)
incubation_water_mass (kilograms (kg))
byssal_threads (threads hr-1)
delta_ta (umol kg-1)
delta_nh3 (umol kg-1)


[alongtrack New Horizon 2000] - Shipboard sensor data from along the ship track of R/V New Horizon cruises NH0005and NH0007 in the Northeast Pacific in 2000 as part of the U.S. GLOBEC program (NEP project) (U.S. GLOBEC Northeast Pacific)

Summary:
Shipboard sensor data from along the ship track of R/V New Horizon cruises NH0005and NH0007 in the Northeast Pacific in 2000 as part of the U.S. GLOBEC program.

cdm_data_type = Other
VARIABLES:
cruiseid (dimensionless)
ship (dimensionless)
year (4-digit year)
yrday_utc (yearday)
yrday_local (yearday)
latitude (degrees_north)
longitude (degrees_east)
temp_ss (degrees Centigrade)
temp_ss_sec (degrees Centigrade)
cond (mmhos/cm)
sal_ss (psu)
fluor (volts)
temp_air (degrees Centigrade)
humidity (%)
press_bar (millibars)
radiation_s (W/m2)
radiation_l (W/m2)
wind_east_c (Eastward Wind, meters/second)
wind_north_c (Northward Wind, meters/second)
month_gmt (dimensionless)
day_gmt (dimensionless)
time_gmt (hours and minutes)
time (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)


[alongtrack SJ9505] - Ship sensor data collected along the track during R/V Seward Johnson cruise SJ9505 in the Gulf of Maine and Georges Bank in 1995 as part of the U.S. GLOBEC program (GB project) (U.S. GLOBEC Georges Bank)

Summary:
Ship sensor data collected along the track during R/V Seward Johnson cruise SJ9505 in the Gulf of Maine and Georges Bank in 1995 as part of the U.S. GLOBEC program (GB project)

cdm_data_type = Other
VARIABLES:
cruiseid
year
ship
yrday0_gmt (dec. yearday)
latitude (degrees_north)
longitude (degrees_east)
temp_air (degrees C)
temp_ss5 (degrees C)
sal (PSU)
flvolt (volts)
wind_vel_u (m/sec)
wind_vel_v (m/sec)
par_v
press_bar (unknown)
wind_spd (m/sec)
wind_dir (Wind From Direction, degrees)
month_gmt (unitless)
day_gmt (unitless)
time_gmt (unitless)
time (ISO Date Time, seconds since 1970-01-01T00:00:00Z)


[alongtrack] - Alongtrack data collected continuously by the ship's underway acquisition system from ARSV Laurence M. Gould cruise LMG1110 in the Southern Ocean in 2011 (Population ecology of Salpa thompsoni based on molecular indicators)

Summary:
This alongtrack data set consists of a single file produced for each day of
the LMG1110 cruise, from 11/2/2011 to 12/1/2011.\u00a0 Data were obtained
primarily by applying calibrations to raw data and decimating to whole point
intervals.\u00a0 However, several fields are derived measurements from more
than a single raw input.\u00a0

IEDA has published a DOI for another version of this dataset: 'Underway
Hydrographic, Weather and Ship-state Data (JGOFS) from Laurence M. Gould
expedition LMG1110 (2011)'\u00a0[10.1594/IEDA/318148](\\http://www.marine-
geo.org/tools/search/Files.php?tab=datacitation&data_set_uid=18148\\)

cdm_data_type = Other
VARIABLES:
yrday (integer)
month_gmt (mm)
day_gmt (dd)
date (dd/mm/yy)
year (unitless)
time_gmt (decimal hours)
latitude (degrees_north)
longitude (degrees_east)
sog (Speed Over Ground, knots)
gps_hdop (-)
head (Degrees(azimuth))
cog (Course Over Ground, Degrees(azimuth))
PAR_mast (uE/m2/sec)
temp_ss (degrees C)
sal_ss (PSU)
depth_w (Depth, m)
wind_speed (meters/sec)
wind_dir (Wind From Direction, degrees(azimuth))
... (6 more variables)


[alongtrack] - Alongtrack data from ship's Data Acquisition System (DAS) from R/V Thomas G. Thompson cruise TN277 in the Eastern North Pacific Ocean in 2012 (POWOW project) (Seasonal and decadal changes in temperature drive Prochlorococcus ecotype distribution patterns)

Summary:
Alongtrack data from ship's Data Acquisition System (DAS) from R/V Thomas G. Thompson cruise TN277 in the Eastern North Pacific Ocean in 2012. Data were collected along the cruise track from the ship's IMET sensors, thermosalinograph, Knudesn, and GPS.

cdm_data_type = Other
VARIABLES:
yrday (unitless)
month_gmt (mm (01 to 12))
day_gmt (dd (01 to 31))
year (unitless)
time_gmt (HH:MM:SS)
date_gmt (unitless)
latitude (degrees_north)
longitude (degrees_east)
temp (Temperature, degrees Celsius)
cond (Seimens/meter)
sal (PSU)
depth_w (Depth, meters)
chl_raw (volts)
light_trans_v (volts)
PAR (Photosynthetically Available Radiation, uE/m^2/sec)
radiation_s (watts/square meter)
temp_air (degrees Celsius)
press_bar (millibars)
wind_speed (knots)
wind_dir (degrees)
wind_speed_r (knots)
wind_dir_r (degrees)
wind_speed_avg (knots)
wind_dir_avg (degrees)
sound_vel (meters/second)
... (9 more variables)


[alongtrack] - Data collected daily along the ship track in JGOFS format from ARSV Laurence M. Gould and RVIB Nathaniel B. Palmer cruises to the Southern Ocean from 2001-2003 as part of the Southern Ocean GLOBEC project. (U.S. GLOBEC Southern Ocean)

Summary:
Data collected daily along the ship track in JGOFS format from ARSV Laurence M. Gould and RVIB Nathaniel B. Palmer cruises to the Southern Ocean from 2001-2003 as part of the Southern Ocean GLOBEC project

cdm_data_type = Other
VARIABLES:
cruiseid
year (unitless)
date_gmt (unitless)
yrday_gmt
time_gmt (decimal hours)
latitude (degrees_north)
longitude (degrees_east)
sog (Speed Over Ground, knots)
gps_hdop (-)
head (Degrees(azimuth))
cmg (Degrees(azimuth))
PAR (Downwelling Photosynthetic Photon Radiance In Sea Water, uE/m2/sec)
temp_ss (degrees C)
cond_ss (siemens/meter)
sal_ss (dimensionless)
depth_w (Depth, meters)
wind_speed_c (Wind Speed, meters/sec)
wind_dir_c (Wind From Direction, degrees(azimuth))
temp_air (degrees C)
humidity (percent)
press_bar (milliBars)
flvolt (volts)
radiation_l (watts/meters2)
radiation_s (watts/meters2)
time (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)


[alongtrack] - Positions along the ship's track of NOAA Ship Ronald H. Brown cruise RHB0603 in the Sargasso Sea and Southeast North Atlantic Ocean in 2006 as part of the Census of Marine Life (CMarZ_2004-2010 project) (Census of Marine Zooplankton-2004-2010)

Summary:
Positions along the ship's track of NOAA Ship Ronald H. Brown cruise RHB0603 in the Sargasso Sea and Southeast North Atlantic Ocean in 2006 as part of the Census of Marine Life project.

cdm_data_type = Other
VARIABLES:
cruiseid (unitless)
year_start (unitless)
yrday_gmt (decimal day)
month_gmt
day_gmt
year
time_gmt (HHmm.m)
latitude (degrees_north)
longitude (degrees_east)
cog (Course Over Ground, true degrees)
sog (Speed Over Ground, knots (nautical miles per hour))
depth_w (Depth, meters)


[alongtrack] - Ship data collected along the track during AlbatrossIV broadscale cruises to the Gulf of Maine and Georges Bank in the U.S. GLOBEC Georges Bank project from 1995-1999 (GB project) (U.S. GLOBEC Georges Bank)

Summary:
Ship data collected along the track during AlbatrossIV broadscale cruises to the Gulf of Maine and Georges Bank in the U.S. GLOBEC Georges Bank project from 1995-1999 (GB project)

cdm_data_type = Other
VARIABLES:
year
ship
cruiseid
yrday1_local (decimal yearday)
latitude (degrees_north)
longitude (degrees_east)
temp_air (degrees C)
temp_ss5 (degrees C)
sal (PPT)
flvolt (volts(uncalibrated))
wind_vel_u (knots)
wind_vel_v (knots)