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     data   graph     files  public [zooplankton_taxonomy] - Zooplankton taxonomic data from MOCNESS and IONESS tows from VERTIGO
cruises KM0414, ZHNG09RR from the Hawaiian Islands HOT Site, NW SubArctic Pacific Ocean K2
Site, 2004-2005 (VERTIGO project) (VERtical Transport In the Global Ocean)
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The Dataset's Variables and Attributes

Row Type Variable Name Attribute Name Data Type Value
attribute NC_GLOBAL access_formats String .htmlTable,.csv,.json,.mat,.nc,.tsv,.esriCsv,.geoJson
attribute NC_GLOBAL acquisition_description String Methodology: [Methodology](\\"http://ocb.whoi.edu/VERTIGO/PI-NOTES/multi-ship_zooplankton.html\\") Change history: YYMMDD 080711: contributed by Joe Cope 090213: Cruise_ID \"K2\" changed to \"RR_K2\" for consistency with other VERTIGO data sets \"date\" column header changed to \"date_begin\" \"time\" column header changed to \"time_begin\" 090224: added to OCB database; Steve Gegg (sgegg@whoi.edu), BCO DMO
attribute NC_GLOBAL cdm_data_type String Other
attribute NC_GLOBAL comment String version: 24 February 2009
PI: Steinberg
Zooplankton data from MOCNESS and IONESS tows
attribute NC_GLOBAL Conventions String COARDS, CF-1.6, ACDD-1.3
attribute NC_GLOBAL creator_email String info at bco-dmo.org
attribute NC_GLOBAL creator_name String BCO-DMO
attribute NC_GLOBAL creator_type String institution
attribute NC_GLOBAL creator_url String https://www.bco-dmo.org/ (external link)
attribute NC_GLOBAL data_source String extract_data_as_tsv version 2.3 19 Dec 2019
attribute NC_GLOBAL date_created String 2010-06-16T20:40:39Z
attribute NC_GLOBAL date_modified String 2020-01-16T21:56:50Z
attribute NC_GLOBAL defaultDataQuery String &time<now
attribute NC_GLOBAL doi String 10.1575/1912/bco-dmo.3014.1
attribute NC_GLOBAL Easternmost_Easting double 161.33
attribute NC_GLOBAL geospatial_lat_max double 47.12
attribute NC_GLOBAL geospatial_lat_min double 22.73
attribute NC_GLOBAL geospatial_lat_units String degrees_north
attribute NC_GLOBAL geospatial_lon_max double 161.33
attribute NC_GLOBAL geospatial_lon_min double -158.04
attribute NC_GLOBAL geospatial_lon_units String degrees_east
attribute NC_GLOBAL geospatial_vertical_max double 1000.0
attribute NC_GLOBAL geospatial_vertical_min double 50.0
attribute NC_GLOBAL geospatial_vertical_positive String down
attribute NC_GLOBAL geospatial_vertical_units String m
attribute NC_GLOBAL infoUrl String https://www.bco-dmo.org/dataset/3014 (external link)
attribute NC_GLOBAL institution String BCO-DMO
attribute NC_GLOBAL instruments_0_acronym String MOCNESS
attribute NC_GLOBAL instruments_0_dataset_instrument_nid String 4798
attribute NC_GLOBAL instruments_0_description String The Multiple Opening/Closing Net and Environmental Sensing System or MOCNESS is a family of net systems based on the Tucker Trawl principle. There are currently 8 different sizes of MOCNESS in existence which are designed for capture of different size ranges of zooplankton and micro-nekton Each system is designated according to the size of the net mouth opening and in two cases, the number of nets it carries. The original MOCNESS (Wiebe et al, 1976) was a redesigned and improved version of a system described by Frost and McCrone (1974).(from MOCNESS manual) This designation is used when the specific type of MOCNESS (number and size of nets) was not specified by the contributing investigator.
attribute NC_GLOBAL instruments_0_instrument_external_identifier String https://vocab.nerc.ac.uk/collection/L22/current/NETT0097/ (external link)
attribute NC_GLOBAL instruments_0_instrument_name String MOCNESS
attribute NC_GLOBAL instruments_0_instrument_nid String 511
attribute NC_GLOBAL instruments_0_supplied_name String MOCNESS
attribute NC_GLOBAL instruments_1_acronym String IONESS
attribute NC_GLOBAL instruments_1_dataset_instrument_nid String 4799
attribute NC_GLOBAL instruments_1_description String The Intelligent Operative Net Sampling System (IONESS) is a sampling net system similar to a MOCNESS that is towed through the water column and can be controlled to open and close over specified depth intervals.
attribute NC_GLOBAL instruments_1_instrument_external_identifier String https://vocab.nerc.ac.uk/collection/L05/current/22/ (external link)
attribute NC_GLOBAL instruments_1_instrument_name String Intelligent Operative Net Sampling System
attribute NC_GLOBAL instruments_1_instrument_nid String 529
attribute NC_GLOBAL instruments_1_supplied_name String Intelligent Operative Net Sampling System
attribute NC_GLOBAL keywords String bco, bco-dmo, begin, biological, chemical, cruise, Cruise_ID, data, dataset, date, date_begin, dens, depth, depth_begin, depth_end, dmo, erddap, event, filt, latitude, longitude, management, oceanography, office, preliminary, tax, tax_dens, taxon, time, time_begin, vol, vol_filt
attribute NC_GLOBAL license String https://www.bco-dmo.org/dataset/3014/license (external link)
attribute NC_GLOBAL metadata_source String https://www.bco-dmo.org/api/dataset/3014 (external link)
attribute NC_GLOBAL Northernmost_Northing double 47.12
attribute NC_GLOBAL param_mapping String {'3014': {'lat': 'master - latitude', 'depth_begin': 'flag - depth', 'lon': 'master - longitude'}}
attribute NC_GLOBAL parameter_source String https://www.bco-dmo.org/mapserver/dataset/3014/parameters (external link)
attribute NC_GLOBAL people_0_affiliation String Virginia Institute of Marine Science
attribute NC_GLOBAL people_0_affiliation_acronym String VIMS
attribute NC_GLOBAL people_0_person_name String Deborah K. Steinberg
attribute NC_GLOBAL people_0_person_nid String 50855
attribute NC_GLOBAL people_0_role String Principal Investigator
attribute NC_GLOBAL people_0_role_type String originator
attribute NC_GLOBAL people_1_affiliation String Virginia Institute of Marine Science
attribute NC_GLOBAL people_1_affiliation_acronym String VIMS
attribute NC_GLOBAL people_1_person_name String Joe Cope
attribute NC_GLOBAL people_1_person_nid String 51023
attribute NC_GLOBAL people_1_role String Analyst
attribute NC_GLOBAL people_1_role_type String related
attribute NC_GLOBAL people_2_affiliation String Woods Hole Oceanographic Institution
attribute NC_GLOBAL people_2_affiliation_acronym String WHOI BCO-DMO
attribute NC_GLOBAL people_2_person_name String Cynthia L. Chandler
attribute NC_GLOBAL people_2_person_nid String 50637
attribute NC_GLOBAL people_2_role String BCO-DMO Data Manager
attribute NC_GLOBAL people_2_role_type String related
attribute NC_GLOBAL project String VERTIGO
attribute NC_GLOBAL projects_0_acronym String VERTIGO
attribute NC_GLOBAL projects_0_description String NSF Award Abstract:
In this study, researchers at the Woods Hole Oceanographic Institution, Virginia Institute of Marine Science, University of California - Santa Cruz, University of California - Santa Barbara, University of Tasmania, and NIWA-Australia will work collaboratively to answer a difficult question in marine biogeochemistry: What controls the efficiency of particle transport between the surface and deep ocean? More specifically, what is the fate of sinking particles leaving the upper ocean and what factors influence remineralization length scales for different sinking particle classes? Knowing the efficiency of particle transport is important for an accurate assessment of the ocean carbon sink. Globally, the magnitude and efficiency of the biological pump will in part modulate levels of atmospheric carbon dioxide.
The research team intends to test two basic hypotheses about remineralization control, namely: (1) particle source characteristics are the dominant control on the efficiency of particle transport; and/or that (2) mid-water processing, either by zooplankton or bacteria, controls transport efficiency. To do so, they will conduct process studies at sea focused on particle flux and composition changes in the upper 500-1000m of the ocean. The basic approach is to examine changes in particle composition and flux with depth within a given source region using a combination of approaches, many of which are new to the field. These include neutrally buoyant sediment traps, particle pumps, settling columns and respiration chambers, along with the development of new biological and geochemical tools for an integrated biogeochemical assessment of the biological pump. Two sites will be studied extensively on three-week process study cruises: the Hawaii Ocean Time-series site (HOT) and a new moored time-series site in the subarctic NW Pacific (Japanese site K2; 47oN 160oE). There are strong contrasts between these sites in rates of production, export, particle composition and expected remineralization length scales.
Evidence for variability in the flux vs. depth relationship of sinking particles is not in dispute, but the controls on particle transport efficiency through the twilight zone remain poorly understood. A lack of reliable flux and particle characterization data within the twilight zone has hampered our ability to make progress in this area, and no single approach is likely to resolve these issues. The proposed study will apply quantitative modeling to determine the net effects of the individual particle processes on the effective transport of carbon and other elements and to place the shipboard observations in the context of spatial and temporal variations in these processes
Besides the obvious contributions to the study of the oceanic and planetary carbon cycles, there are broader outcomes and impacts forthcoming from this project. Graduate and undergraduate students will be included in all aspects of the research, and the involvement of non-US PIs will encourage exchange of students and post-docs between labs in different countries. In addition, the component groups will continue to maintain science web sites designed for both public and scientific exchange where the broader and specific goals and outcomes of this work can be communicated.
Original PI-provided project description:
The main goal of VERTIGO is the investigation of the mechanisms that control the efficiency of particle transport through the mesopelagic portion of the water column.
Question: What controls the efficiency of particle transport between the surface and deep ocean? More specifically, what is the fate of sinking particles leaving the upper ocean and what factors influence remineralization length scales for different sinking particle classes? VERTIGO researchers have set out to test two basic hypotheses regarding remineralization control, namely:
1. particle source characteristics are the dominant control on the efficiency of particle transport; and/or that
2. mid-water processing, either by zooplankton or bacteria, controls transport efficiency.
To test their hypotheses, they will conduct process studies in the field focused on particle flux and composition changes in the upper 500-1000m of the ocean. The basic approach is to examine changes in particle composition and flux with depth within a given source region using a combination of approaches, many of which are new to the field. These include neutrally buoyant sediment traps, particle pumps, settling columns and respiration chambers, along with the development of new biological and geochemical tools for an integrated biogeochemical assessment of the biological pump. Three week process study cruises have been planned at two sites - the Hawaii Ocean Time-series site (HOT) and a new moored time-series site in the subarctic NW Pacific (Japanese site K2; 47oN 160oE) - where there are strong contrasts in rates of production, export, particle composition and expected remineralization length scales.
Evidence for variability in the flux vs. depth relationship of sinking particles is not in dispute but the controls on particle transport efficiency through the twilight zone remain poorly understood. A lack of reliable flux and particle characterization data within the twilight zone has hampered our ability to make progress in this area, and no single approach is likely to resolve these issues. The proposed study will apply quantitative modeling to determine the net effects of the individual particle processes on the effective transport of carbon and other elements, and to place the shipboard observations in the context of spatial and temporal variations in these processes. For rapid progress in this area, we have organized this effort as a group proposal taking advantage of expertise in the US and international community.
The efficiency of particle transport is important for an accurate assessment of the ocean C sink. Globally, the magnitude and efficiency of the biological pump will in part modulate levels of atmospheric CO2. We maintain that to understand present day ocean C sequestration and to evaluate potential strategies for enhancing sequestration, we need to assess possible changes in the efficiency of particle transport due to climate variability or via purposeful manipulations of C uptake, such as via iron fertilization.
VERTIGO Acknowledgments: (from K.O. Buesseler, et al / Deep-Sea Research II 55 (2008) 1522-1539) We thank the officers, crew and shore-based support teams for the R/V Kilo Moana (2004) and R/V Roger Revelle (2005). Funding for VERTIGO was provided primarily by research grants from the US National Science Foundation Programs in Chemical and Biological Oceanography (KOB, CHL, MWS, DKS, DAS). Additional US and non-US grants included: US Department of Energy, Office of Science, Biological and Environmental Research Program (JKBB); the Gordon and Betty Moore Foundation (DMK); the Australian Cooperative Research Centre program and Australian Antarctic Division (TWT); Chinese NSFC and MOST programs (NZJ); Research Foundation Flanders and Vrije Universiteit Brussel (FD, ME); JAMSTEC (MCH); New Zealand Public Good Science Foundation (PWB); and internal WHOI sources and a contribution from the John Aure and Cathryn Ann Hansen Buesseler Foundation (KOB). A number of individuals at sea and on shore, helped make the VERTIGO project a success, including: J. Andrews, C. Bertrand, R. Bidigare III, S. Bray, K. Casciotti, M. Charette, R. Condon, J. Cope, E. Fields, M. Gall, M. Gonneea, P. Henderson, T. Kobari, D. Kunz, S. Saitoh, S. Manganini, C. Moy, S. Okamoto, S. Pike, L. Robertson, D. Ruddick and Y. Zhang. Suggestions by three anonymous reviewers and help by the editor, R. Lampitt, are also greatly appreciated.
attribute NC_GLOBAL projects_0_end_date String 2007-07
attribute NC_GLOBAL projects_0_geolocation String HOT site and subarctic NW Pacific
attribute NC_GLOBAL projects_0_name String VERtical Transport In the Global Ocean
attribute NC_GLOBAL projects_0_project_nid String 2050
attribute NC_GLOBAL projects_0_project_website String https://cafethorium.whoi.edu/projects/vertigo/ (external link)
attribute NC_GLOBAL projects_0_start_date String 2003-07
attribute NC_GLOBAL publisher_name String Biological and Chemical Oceanographic Data Management Office (BCO-DMO)
attribute NC_GLOBAL publisher_type String institution
attribute NC_GLOBAL sourceUrl String (local files)
attribute NC_GLOBAL Southernmost_Northing double 22.73
attribute NC_GLOBAL standard_name_vocabulary String CF Standard Name Table v55
attribute NC_GLOBAL summary String Zooplankton taxonomic data from MOCNESS and IONESS tows from VERTIGO cruises KM0414, ZHNG09RR from the Hawaiian Islands HOT Site, NW SubArctic Pacific Ocean K2 Site, 2004-2005
attribute NC_GLOBAL title String [zooplankton_taxonomy] - Zooplankton taxonomic data from MOCNESS and IONESS tows from VERTIGO cruises KM0414, ZHNG09RR from the Hawaiian Islands HOT Site, NW SubArctic Pacific Ocean K2 Site, 2004-2005 (VERTIGO project) (VERtical Transport In the Global Ocean)
attribute NC_GLOBAL version String 1
attribute NC_GLOBAL Westernmost_Easting double -158.04
attribute NC_GLOBAL xml_source String osprey2erddap.update_xml() v1.3
variable Cruise_ID   String  
attribute Cruise_ID bcodmo_name String cruise_id
attribute Cruise_ID description String VERTIGO cruise name
attribute Cruise_ID long_name String Cruise ID
attribute Cruise_ID units String text
variable event   String  
attribute event bcodmo_name String event
attribute event description String unique sampling event
attribute event long_name String Event
attribute event nerc_identifier String https://vocab.nerc.ac.uk/collection/P01/current/EVTAGFL/ (external link)
attribute event units String dimensionless
variable date_begin   int  
attribute date_begin _FillValue int 2147483647
attribute date_begin actual_range int 20040624, 20050816
attribute date_begin bcodmo_name String date_begin
attribute date_begin description String date at start of tow (UTC) in the format YYYYMMDD
attribute date_begin long_name String Date Begin
attribute date_begin units String unitless
variable time_begin   String  
attribute time_begin bcodmo_name String time_begin
attribute time_begin description String time at start of tow (UTC) in the format HHMM
attribute time_begin long_name String Time Begin
attribute time_begin units String unitless
variable latitude   double  
attribute latitude _CoordinateAxisType String Lat
attribute latitude _FillValue double NaN
attribute latitude actual_range double 22.73, 47.12
attribute latitude axis String Y
attribute latitude bcodmo_name String latitude
attribute latitude colorBarMaximum double 90.0
attribute latitude colorBarMinimum double -90.0
attribute latitude description String latitude, negative denotes South
attribute latitude ioos_category String Location
attribute latitude long_name String Latitude
attribute latitude nerc_identifier String https://vocab.nerc.ac.uk/collection/P09/current/LATX/ (external link)
attribute latitude standard_name String latitude
attribute latitude units String degrees_north
variable longitude   double  
attribute longitude _CoordinateAxisType String Lon
attribute longitude _FillValue double NaN
attribute longitude actual_range double -158.04, 161.33
attribute longitude axis String X
attribute longitude bcodmo_name String longitude
attribute longitude colorBarMaximum double 180.0
attribute longitude colorBarMinimum double -180.0
attribute longitude description String longitude, negative denotes West
attribute longitude ioos_category String Location
attribute longitude long_name String Longitude
attribute longitude nerc_identifier String https://vocab.nerc.ac.uk/collection/P09/current/LONX/ (external link)
attribute longitude standard_name String longitude
attribute longitude units String degrees_east
variable depth_end   short  
attribute depth_end _FillValue short 32767
attribute depth_end actual_range short 0, 750
attribute depth_end bcodmo_name String depth_end
attribute depth_end colorBarMaximum double 8000.0
attribute depth_end colorBarMinimum double -8000.0
attribute depth_end colorBarPalette String TopographyDepth
attribute depth_end description String depth at end of tow
attribute depth_end long_name String Depth
attribute depth_end standard_name String depth
attribute depth_end units String meters
variable depth   double  
attribute depth _CoordinateAxisType String Height
attribute depth _CoordinateZisPositive String down
attribute depth _FillValue double NaN
attribute depth actual_range double 50.0, 1000.0
attribute depth axis String Z
attribute depth bcodmo_name String depth_begin
attribute depth colorBarMaximum double 8000.0
attribute depth colorBarMinimum double -8000.0
attribute depth colorBarPalette String TopographyDepth
attribute depth description String depth at start of tow
attribute depth ioos_category String Location
attribute depth long_name String Depth
attribute depth positive String down
attribute depth standard_name String depth
attribute depth units String m
variable vol_filt   float  
attribute vol_filt _FillValue float NaN
attribute vol_filt actual_range float 266.1, 2451.9
attribute vol_filt bcodmo_name String vol_filt
attribute vol_filt description String volume filtered by net
attribute vol_filt long_name String Vol Filt
attribute vol_filt units String meters^3
variable taxon   String  
attribute taxon bcodmo_name String taxon
attribute taxon description String major taxonomic grouping
attribute taxon long_name String Taxon
attribute taxon units String text
variable tax_dens   float  
attribute tax_dens _FillValue float NaN
attribute tax_dens actual_range float 0.0, 1149.71
attribute tax_dens bcodmo_name String abundance
attribute tax_dens description String taxon density
attribute tax_dens long_name String Tax Dens
attribute tax_dens nerc_identifier String https://vocab.nerc.ac.uk/collection/P03/current/B070/ (external link)
attribute tax_dens units String #/meters^3

The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.


 
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