ERDDAP > info > bcodmo_dataset_3684

Grid DAP Data	Sub- set	Table DAP Data	Make A Graph	W M S	Source Data Files	Acces- sible	Title	Sum- mary	FGDC, ISO, Metadata	Back- ground Info	RSS	E mail	Institution	Dataset ID
	set	data	graph		files	public	[Event logs: MCR10-1 and MCR11-1] - Scientific sampling event logs from two cruises/trips at the Richard B Gump Research Station at Moorea LTER in 2010 and 2011 (MCR LTER and Coral DOM projects) (Moorea Coral Reef Long-Term Ecological Research site)		F   I   M	background			BCO-DMO	bcodmo_dataset_3684

The Dataset's Variables and Attributes

Row Type	Variable Name	Attribute Name	Data Type	Value
attribute	NC_GLOBAL	access_formats	String	.htmlTable,.csv,.json,.mat,.nc,.tsv,.esriCsv,.geoJson,.odvTxt
attribute	NC_GLOBAL	acquisition_description	String	In 2010, various boats, including the following, were used to sample from the research station: Gump Safe boat, boats 609, 509, and 389. 2011 Experiments (codes in parenthesese correspond to 'project_code' column): Benthic Tent Incubations (TentI - TentV) - 48h Duration; Continuous: Oxygen, pH, Temp, Salinity; Daily: DOC, FCM, DNA, start-end POM. Niskin in situ incubations (NBE) - 24h Duration; Start-End DOC, FCM, DNA, DO... Release-Remineralization (RR) - 24h Exudation, 48h Remineralization (with and without Sand, Light and Dark): DOC, DO, FCM, DNA. Coral Damage (Sprout Soup) - 24h Exudation, 7 day incubation (daily water change + exudate spike). Big Pillow Experiments (BPE) - 24h Exudation, 48h incubation (metagenomic filtration at 48h, maintain for later DOC timepoints and FCM. Flow and Flux Surveys (FF) Porewater Sampling (PW) SandBag (SB) - Sand, Autoclaved Sand, incubated in offshore water in ~5L bags (unfiltered). 2011 Methodology: FCM - 1.5ml sample, 90 uL PFA (8% or 32% stocks). DOC - collected through 47mm combusted GF/F into acid-leached 60ml HDPE or combusted EPA. nutrients - collected through 47mm combusted GF/F into triple-rinsed HDPE scint vials. DNA - 500+ mL whole water collected onto Sterivex. Oxygen (NBE T0) - After sampling DOC, FCM, additional offsh. water to fill, optode measure, close with spill. Oxygen (NBE TF) - Before other samples, open niskin to laminar flow into BOD bottle, overfill 2X, DO meas. POC (NBE) - 500-1000 mL collected through 25mm combusted GF/F. POC (FF) - 4L collected through 25mm combusted GF/F. Chlorohpyll (FF) - 1L collected through 25mm combusted GF/F. Fluorescein - 60ml initial line flush, then 10ml syringe sampled emptied 15ml falcon frozen -20.
attribute	NC_GLOBAL	awards_0_award_nid	String	54988
attribute	NC_GLOBAL	awards_0_award_number	String	OCE-0927411
attribute	NC_GLOBAL	awards_0_data_url	String	http://www.nsf.gov/awardsearch/showAward.do?AwardNumber=0927411
attribute	NC_GLOBAL	awards_0_funder_name	String	NSF Division of Ocean Sciences
attribute	NC_GLOBAL	awards_0_funding_acronym	String	NSF OCE
attribute	NC_GLOBAL	awards_0_funding_source_nid	String	355
attribute	NC_GLOBAL	awards_0_program_manager	String	David L. Garrison
attribute	NC_GLOBAL	awards_0_program_manager_nid	String	50534
attribute	NC_GLOBAL	cdm_data_type	String	Other
attribute	NC_GLOBAL	comment	String	Event Log Project: Coral DOM Chief Sci: Craig Carlson (UC Santa Barbara, MSI) Co-Chief Sci & Contact: Craig Nelson (UC Santa Barbara, MSI) Version History: Dataset updated: 02 January 2013 Original data: 31 July 2012 NOTE: lat_lab & lon_lab given for shore site (Richard B Gump Research Stn.); coordinates for events will be added as more data are submitted by PI.
attribute	NC_GLOBAL	Conventions	String	COARDS, CF-1.6, ACDD-1.3
attribute	NC_GLOBAL	creator_email	String	info at bco-dmo.org
attribute	NC_GLOBAL	creator_name	String	BCO-DMO
attribute	NC_GLOBAL	creator_type	String	institution
attribute	NC_GLOBAL	creator_url	String	https://www.bco-dmo.org/
attribute	NC_GLOBAL	data_source	String	extract_data_as_tsv version 2.3 19 Dec 2019
attribute	NC_GLOBAL	date_created	String	2012-07-31T14:06:10Z
attribute	NC_GLOBAL	date_modified	String	2019-08-29T12:47:29Z
attribute	NC_GLOBAL	defaultDataQuery	String	&time<now
attribute	NC_GLOBAL	doi	String	10.1575/1912/bco-dmo.3684.2
attribute	NC_GLOBAL	Easternmost_Easting	double	-149.826
attribute	NC_GLOBAL	geospatial_lat_max	double	-17.4907
attribute	NC_GLOBAL	geospatial_lat_min	double	-17.4907
attribute	NC_GLOBAL	geospatial_lat_units	String	degrees_north
attribute	NC_GLOBAL	geospatial_lon_max	double	-149.826
attribute	NC_GLOBAL	geospatial_lon_min	double	-149.826
attribute	NC_GLOBAL	geospatial_lon_units	String	degrees_east
attribute	NC_GLOBAL	infoUrl	String	https://www.bco-dmo.org/dataset/3684
attribute	NC_GLOBAL	institution	String	BCO-DMO
attribute	NC_GLOBAL	keywords	String	activity, bco, bco-dmo, biological, chemical, code, comment, cruiseid, data, dataset, date, date_local, desig, dmo, end, erddap, event, iso, latitude, local, longitude, management, oceanography, office, preliminary, project, project_code, sample, sample_desig, site, site_ID, start, time, time_end_local, time_start_local, year
attribute	NC_GLOBAL	license	String	https://www.bco-dmo.org/dataset/3684/license
attribute	NC_GLOBAL	metadata_source	String	https://www.bco-dmo.org/api/dataset/3684
attribute	NC_GLOBAL	Northernmost_Northing	double	-17.4907
attribute	NC_GLOBAL	param_mapping	String	{'3684': {'lon_lab': 'flag - longitude', 'ISO_DateTime_start_UTC': 'flag - time', 'lat_lab': 'flag - latitude'}}
attribute	NC_GLOBAL	parameter_source	String	https://www.bco-dmo.org/mapserver/dataset/3684/parameters
attribute	NC_GLOBAL	people_0_affiliation	String	University of California-Santa Barbara
attribute	NC_GLOBAL	people_0_affiliation_acronym	String	UCSB-MSI
attribute	NC_GLOBAL	people_0_person_name	String	Craig Carlson
attribute	NC_GLOBAL	people_0_person_nid	String	50575
attribute	NC_GLOBAL	people_0_role	String	Chief Scientist
attribute	NC_GLOBAL	people_0_role_type	String	originator
attribute	NC_GLOBAL	people_1_affiliation	String	University of Hawaii at Manoa
attribute	NC_GLOBAL	people_1_affiliation_acronym	String	SOEST
attribute	NC_GLOBAL	people_1_person_name	String	Craig E. Nelson
attribute	NC_GLOBAL	people_1_person_nid	String	51538
attribute	NC_GLOBAL	people_1_role	String	Co-Chief Scientist
attribute	NC_GLOBAL	people_1_role_type	String	originator
attribute	NC_GLOBAL	people_2_affiliation	String	University of Hawaii at Manoa
attribute	NC_GLOBAL	people_2_affiliation_acronym	String	SOEST
attribute	NC_GLOBAL	people_2_person_name	String	Craig E. Nelson
attribute	NC_GLOBAL	people_2_person_nid	String	51538
attribute	NC_GLOBAL	people_2_role	String	Contact
attribute	NC_GLOBAL	people_2_role_type	String	related
attribute	NC_GLOBAL	people_3_affiliation	String	Woods Hole Oceanographic Institution
attribute	NC_GLOBAL	people_3_affiliation_acronym	String	WHOI BCO-DMO
attribute	NC_GLOBAL	people_3_person_name	String	Shannon Rauch
attribute	NC_GLOBAL	people_3_person_nid	String	51498
attribute	NC_GLOBAL	people_3_role	String	BCO-DMO Data Manager
attribute	NC_GLOBAL	people_3_role_type	String	related
attribute	NC_GLOBAL	project	String	MCR LTER,Coral DOM
attribute	NC_GLOBAL	projects_0_acronym	String	MCR LTER
attribute	NC_GLOBAL	projects_0_description	String	From http://www.lternet.edu/sites/mcr/ and http://mcr.lternet.edu/: The Moorea Coral Reef LTER site encompasses the coral reef complex that surrounds the island of Moorea, French Polynesia (17°30'S, 149°50'W). Moorea is a small, triangular volcanic island 20 km west of Tahiti in the Society Islands of French Polynesia. An offshore barrier reef forms a system of shallow (mean depth ~ 5-7 m), narrow (~0.8-1.5 km wide) lagoons around the 60 km perimeter of Moorea. All major coral reef types (e.g., fringing reef, lagoon patch reefs, back reef, barrier reef and fore reef) are present and accessible by small boat. The MCR LTER was established in 2004 by the US National Science Foundation (NSF) and is a partnership between the University of California Santa Barbara and California State University, Northridge. MCR researchers include marine scientists from the UC Santa Barbara, CSU Northridge, UC Davis, UC Santa Cruz, UC San Diego, CSU San Marcos, Duke University and the University of Hawaii. Field operations are conducted from the UC Berkeley Richard B. Gump South Pacific Research Station on the island of Moorea, French Polynesia. MCR LTER Data: The Moorea Coral Reef (MCR) LTER data are managed by and available directly from the MCR project data site URL shown above.  The datasets listed below were collected at or near the MCR LTER sampling locations, and funded by NSF OCE as ancillary projects related to the MCR LTER core research themes. The following publications and data resulted from this project: 2012 Edmunds PJ. Effect of pCO2 on the growth, respiration, and photophysiology of massive Porites spp. in Moorea, French Polynesia. Marine Biology 159: 2149-2160. doi:10.1594/PANGAEA.820375Porites growth_respiration_photophysDownload complete data for this publication (Excel file)
attribute	NC_GLOBAL	projects_0_geolocation	String	Island of Moorea, French Polynesia
attribute	NC_GLOBAL	projects_0_name	String	Moorea Coral Reef Long-Term Ecological Research site
attribute	NC_GLOBAL	projects_0_project_nid	String	2222
attribute	NC_GLOBAL	projects_0_project_website	String	http://mcr.lternet.edu/
attribute	NC_GLOBAL	projects_0_start_date	String	2004-09
attribute	NC_GLOBAL	projects_1_acronym	String	Coral DOM
attribute	NC_GLOBAL	projects_1_description	String	This project is part of the ETBC (Emerging Topics in Biogeochemical Cycles) program. From NSF award proposal: The proposed research will investigate the coupling between primary producers and the utilization of dissolved organic matter (DOM) by marine heterotrophic microbes on coral reefs. Previous metagenomic studies of the microbial communities associated with near-pristine and degraded coral reefs demonstrated a shift from a microbial food web similar to the open ocean (Prochlorococcus spp. and SAR11-like bacteria) to a community dominated by "super-heterotrophs", most closely related to known pathogens like E. coli, Staphylococcus spp., Streptococcus spp., Enterobacter spp. and Vibrio spp. This shift is associated with a decline in coral cover and an increase in coral disease prevalence. Our previous research has also shown that dissolved organic carbon (DOC) concentrations are lower on coral reef platforms compared to measurements of offshore waters (60-80 µM). On degraded reefs, we have observed DOC measurements as low as 30 - 40 µM, a value similar to concentrations observed in the deep Pacific Ocean. The observation of low DOC measurements on degraded reefs is decoupled from the high abundance of macroalgae, which one might expect would raise levels of DOC through the release of photosynthate into the water column. The data generated from the proposed research are key to understanding the microbial, chemical, and ecological dynamics on today’s coral reefs. The proposed research plan will consist of five inter-related objectives that will use a combination of field surveys, molecular characterization (microbes and DOM) and experimental approaches to assess the overall hypothesis. We propose to use a combination of archived samples from previous reef expeditions as well as conduct two field visits to reefs in French Polynesia (Moorea) and the Line Islands (Kiritimati) for focused sampling and experimentation. The biogeochemistry, local physical oceanography, and detailed reef ecology has been well characterized and continues to be monitored as part of the MCR-LTER program at Moorea. This environmental context will be useful in interpreting our experimental and field results at Moorea. We will also compare two field sites, Moorea and Kiritimati to ensure that our results are not specific to one region.
attribute	NC_GLOBAL	projects_1_end_date	String	2013-10
attribute	NC_GLOBAL	projects_1_geolocation	String	Moorea, French Polynesia
attribute	NC_GLOBAL	projects_1_name	String	The coupling between DOM, algae, and microbes on coral reef platforms
attribute	NC_GLOBAL	projects_1_project_nid	String	2223
attribute	NC_GLOBAL	projects_1_start_date	String	2009-11
attribute	NC_GLOBAL	publisher_name	String	Biological and Chemical Oceanographic Data Management Office (BCO-DMO)
attribute	NC_GLOBAL	publisher_type	String	institution
attribute	NC_GLOBAL	sourceUrl	String	(local files)
attribute	NC_GLOBAL	Southernmost_Northing	double	-17.4907
attribute	NC_GLOBAL	standard_name_vocabulary	String	CF Standard Name Table v55
attribute	NC_GLOBAL	subsetVariables	String	latitude,longitude
attribute	NC_GLOBAL	summary	String	Scientific sampling event logs recorded during the MCR10-1 cruise/trip (the Coral DOM 2010 Research Campaign) and the MCR11-1 cruise/trip (the Coral DOM 2011 Research Campaign) at the Richard B Gump Research Station at the Moorea Coral Reef LTER site.
attribute	NC_GLOBAL	time_coverage_end	String	2011-09-20T13:00:00Z
attribute	NC_GLOBAL	time_coverage_start	String	2010-09-05T19:30:00Z
attribute	NC_GLOBAL	title	String	[Event logs: MCR10-1 and MCR11-1] - Scientific sampling event logs from two cruises/trips at the Richard B Gump Research Station at Moorea LTER in 2010 and 2011 (MCR LTER and Coral DOM projects) (Moorea Coral Reef Long-Term Ecological Research site)
attribute	NC_GLOBAL	version	String	2
attribute	NC_GLOBAL	Westernmost_Easting	double	-149.826
attribute	NC_GLOBAL	xml_source	String	osprey2erddap.update_xml() v1.3
variable	cruiseid		String
attribute	cruiseid	bcodmo_name	String	cruiseid
attribute	cruiseid	description	String	Name of the research campaign/cruise/deployment.
attribute	cruiseid	long_name	String	Cruiseid
attribute	cruiseid	units	String	dimensionless
variable	year		short
attribute	year	_FillValue	short	32767
attribute	year	actual_range	short	2010, 2011
attribute	year	bcodmo_name	String	year
attribute	year	description	String	4-digit year in YYYY format.
attribute	year	long_name	String	Year
attribute	year	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P01/current/YEARXXXX/
attribute	year	units	String	unitless
variable	latitude		double
attribute	latitude	_CoordinateAxisType	String	Lat
attribute	latitude	_FillValue	double	NaN
attribute	latitude	actual_range	double	-17.4907, -17.4907
attribute	latitude	axis	String	Y
attribute	latitude	bcodmo_name	String	latitude
attribute	latitude	colorBarMaximum	double	90.0
attribute	latitude	colorBarMinimum	double	-90.0
attribute	latitude	description	String	Latitude of the research station; negative indicates south.
attribute	latitude	ioos_category	String	Location
attribute	latitude	long_name	String	Latitude
attribute	latitude	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P09/current/LATX/
attribute	latitude	source_name	String	lat_lab
attribute	latitude	standard_name	String	latitude
attribute	latitude	units	String	degrees_north
variable	longitude		double
attribute	longitude	_CoordinateAxisType	String	Lon
attribute	longitude	_FillValue	double	NaN
attribute	longitude	actual_range	double	-149.826, -149.826
attribute	longitude	axis	String	X
attribute	longitude	bcodmo_name	String	longitude
attribute	longitude	colorBarMaximum	double	180.0
attribute	longitude	colorBarMinimum	double	-180.0
attribute	longitude	description	String	Longitude of the research station; negative indicates west.
attribute	longitude	ioos_category	String	Location
attribute	longitude	long_name	String	Longitude
attribute	longitude	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P09/current/LONX/
attribute	longitude	source_name	String	lon_lab
attribute	longitude	standard_name	String	longitude
attribute	longitude	units	String	degrees_east
variable	event		String
attribute	event	bcodmo_name	String	event
attribute	event	description	String	Unique event ID number.
attribute	event	long_name	String	Event
attribute	event	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P01/current/EVTAGFL/
attribute	event	units	String	dimensionless
variable	project_code		String
attribute	project_code	bcodmo_name	String	unknown
attribute	project_code	description	String	Code that identifies the project/experiment. (2011 data only). Codes: TentI - TentVI = Benthic Tube Incubations; RR = Release-Remineralization; SS = Coral Damage (Sprout Soup); NBE = Niskin in situ Incubations; FF = Flow and Flux Surveys; PW = Porewater Sampling; SB = SandBag; BPE = Big Pillow Experiments.
attribute	project_code	long_name	String	Project Code
attribute	project_code	units	String	dimensionless
variable	site_ID		String
attribute	site_ID	bcodmo_name	String	Site_ID
attribute	site_ID	description	String	Area of operation.
attribute	site_ID	long_name	String	Site ID
attribute	site_ID	units	String	dimensionless
variable	activity		String
attribute	activity	bcodmo_name	String	activity_and_comments
attribute	activity	description	String	Type of sampling activity or experiment.
attribute	activity	long_name	String	Activity
attribute	activity	units	String	dimensionless
variable	sample_desig		String
attribute	sample_desig	bcodmo_name	String	sample_descrip
attribute	sample_desig	description	String	Sample number designator. (2010 data only.)
attribute	sample_desig	long_name	String	Sample Desig
attribute	sample_desig	units	String	dimensionless
variable	date_local		String
attribute	date_local	bcodmo_name	String	date_local
attribute	date_local	description	String	Date in local time.
attribute	date_local	long_name	String	Date Local
attribute	date_local	units	String	mm/dd/yy
variable	time_start_local		String
attribute	time_start_local	bcodmo_name	String	time_start_local
attribute	time_start_local	description	String	Time at start of event; local to French Polynesia (Papeete Tahiti; UTC/GMT -10 hours; Time Zone Code TAHT).
attribute	time_start_local	long_name	String	Time Start Local
attribute	time_start_local	units	String	HHMM
variable	time_end_local		String
attribute	time_end_local	bcodmo_name	String	time_local
attribute	time_end_local	description	String	Time at end of event; local to French Polynesia (Papeete Tahiti; UTC/GMT -10 hours; Time Zone Code TAHT). (2011 data only.)
attribute	time_end_local	long_name	String	Time End Local
attribute	time_end_local	units	String	HHMM
variable	time		double
attribute	time	_CoordinateAxisType	String	Time
attribute	time	actual_range	double	1.283715E9, 1.3165236E9
attribute	time	axis	String	T
attribute	time	bcodmo_name	String	ISO_DateTime_UTC
attribute	time	description	String	Date and time (UTC) formatted to ISO8601 standard. T indicates start of time string; Z indicates UTC.
attribute	time	ioos_category	String	Time
attribute	time	long_name	String	ISO Date Time Start UTC
attribute	time	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P01/current/DTUT8601/
attribute	time	source_name	String	ISO_DateTime_start_UTC
attribute	time	standard_name	String	time
attribute	time	time_origin	String	01-JAN-1970 00:00:00
attribute	time	time_precision	String	1970-01-01T00:00:00Z
attribute	time	units	String	seconds since 1970-01-01T00:00:00Z
variable	si		String
attribute	si	bcodmo_name	String	recorder
attribute	si	description	String	Initials of scientific investigator.
attribute	si	long_name	String	Si
attribute	si	units	String	dimensionless
variable	comment		String
attribute	comment	bcodmo_name	String	comment
attribute	comment	description	String	Description of samples collected and other free-text comments about the event.
attribute	comment	long_name	String	Comment
attribute	comment	units	String	dimensionless

The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.