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Grid DAP Data | Sub- set | Table DAP Data | Make A Graph | W M S | Source Data Files | Acces- sible | Title | Sum- mary | FGDC, ISO, Metadata | Back- ground Info | RSS | E | Institution | Dataset ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
set | data | graph | files | public | [ADCP_Weicker] - Current velocities from ADCP from an R/V Lowell Weicker cruise in Fisher's Island Sound (NY/CT) in May 2012 (Diversity and dynamics of planktonic ciliates - what can next-generation sequencing technologies tell us?) | F I M | background | BCO-DMO | bcodmo_dataset_3713 |
Row Type | Variable Name | Attribute Name | Data Type | Value |
---|---|---|---|---|
attribute | NC_GLOBAL | access_formats | String | .htmlTable,.csv,.json,.mat,.nc,.tsv,.esriCsv,.geoJson |
attribute | NC_GLOBAL | acquisition_description | String | Current velocities were collected at 5 stations by ADCP aboard a one-day cruise in Fisher's Island Sound on R/V Lowell Weicker. |
attribute | NC_GLOBAL | awards_0_award_nid | String | 54721 |
attribute | NC_GLOBAL | awards_0_award_number | String | OCE-1129734 |
attribute | NC_GLOBAL | awards_0_data_url | String | http://www.nsf.gov/awardsearch/showAward.do?AwardNumber=1129734 |
attribute | NC_GLOBAL | awards_0_funder_name | String | NSF Division of Ocean Sciences |
attribute | NC_GLOBAL | awards_0_funding_acronym | String | NSF OCE |
attribute | NC_GLOBAL | awards_0_funding_source_nid | String | 355 |
attribute | NC_GLOBAL | awards_0_program_manager | String | David L. Garrison |
attribute | NC_GLOBAL | awards_0_program_manager_nid | String | 50534 |
attribute | NC_GLOBAL | awards_1_award_nid | String | 54820 |
attribute | NC_GLOBAL | awards_1_award_number | String | OCE-1130033 |
attribute | NC_GLOBAL | awards_1_data_url | String | http://www.nsf.gov/awardsearch/showAward.do?AwardNumber=1130033 |
attribute | NC_GLOBAL | awards_1_funder_name | String | NSF Division of Ocean Sciences |
attribute | NC_GLOBAL | awards_1_funding_acronym | String | NSF OCE |
attribute | NC_GLOBAL | awards_1_funding_source_nid | String | 355 |
attribute | NC_GLOBAL | awards_1_program_manager | String | David L. Garrison |
attribute | NC_GLOBAL | awards_1_program_manager_nid | String | 50534 |
attribute | NC_GLOBAL | cdm_data_type | String | Other |
attribute | NC_GLOBAL | comment | String | Current Velocities measured with Acoustic Doppler Current Profiler R/V Lowell Weicker - 30 May 2012 PI: George B. McManus (UConn) Co-PI: Laura A. Katz (Smith College) Version: 06 Sept 2012 |
attribute | NC_GLOBAL | Conventions | String | COARDS, CF-1.6, ACDD-1.3 |
attribute | NC_GLOBAL | creator_email | String | info at bco-dmo.org |
attribute | NC_GLOBAL | creator_name | String | BCO-DMO |
attribute | NC_GLOBAL | creator_type | String | institution |
attribute | NC_GLOBAL | creator_url | String | https://www.bco-dmo.org/ |
attribute | NC_GLOBAL | data_source | String | extract_data_as_tsv version 2.3 19 Dec 2019 |
attribute | NC_GLOBAL | date_created | String | 2012-09-06T17:20:34Z |
attribute | NC_GLOBAL | date_modified | String | 2018-12-07T18:00:01Z |
attribute | NC_GLOBAL | defaultDataQuery | String | &time<now |
attribute | NC_GLOBAL | doi | String | 10.1575/1912/bco-dmo.3713.1 |
attribute | NC_GLOBAL | Easternmost_Easting | double | -71.93639 |
attribute | NC_GLOBAL | geospatial_lat_max | double | 41.3061 |
attribute | NC_GLOBAL | geospatial_lat_min | double | 41.29669 |
attribute | NC_GLOBAL | geospatial_lat_units | String | degrees_north |
attribute | NC_GLOBAL | geospatial_lon_max | double | -71.93639 |
attribute | NC_GLOBAL | geospatial_lon_min | double | -71.99368 |
attribute | NC_GLOBAL | geospatial_lon_units | String | degrees_east |
attribute | NC_GLOBAL | geospatial_vertical_max | double | 25.0 |
attribute | NC_GLOBAL | geospatial_vertical_min | double | 1.5 |
attribute | NC_GLOBAL | geospatial_vertical_positive | String | down |
attribute | NC_GLOBAL | geospatial_vertical_units | String | m |
attribute | NC_GLOBAL | infoUrl | String | https://www.bco-dmo.org/dataset/3713 |
attribute | NC_GLOBAL | institution | String | BCO-DMO |
attribute | NC_GLOBAL | instruments_0_acronym | String | ADCP |
attribute | NC_GLOBAL | instruments_0_dataset_instrument_nid | String | 5765 |
attribute | NC_GLOBAL | instruments_0_description | String | The ADCP measures water currents with sound, using a principle of sound waves called the Doppler effect. A sound wave has a higher frequency, or pitch, when it moves to you than when it moves away. You hear the Doppler effect in action when a car speeds past with a characteristic building of sound that fades when the car passes. The ADCP works by transmitting "pings" of sound at a constant frequency into the water. (The pings are so highly pitched that humans and even dolphins can't hear them.) As the sound waves travel, they ricochet off particles suspended in the moving water, and reflect back to the instrument. Due to the Doppler effect, sound waves bounced back from a particle moving away from the profiler have a slightly lowered frequency when they return. Particles moving toward the instrument send back higher frequency waves. The difference in frequency between the waves the profiler sends out and the waves it receives is called the Doppler shift. The instrument uses this shift to calculate how fast the particle and the water around it are moving. Sound waves that hit particles far from the profiler take longer to come back than waves that strike close by. By measuring the time it takes for the waves to bounce back and the Doppler shift, the profiler can measure current speed at many different depths with each series of pings. (More from WHOI instruments listing). |
attribute | NC_GLOBAL | instruments_0_instrument_external_identifier | String | https://vocab.nerc.ac.uk/collection/L05/current/115/ |
attribute | NC_GLOBAL | instruments_0_instrument_name | String | Acoustic Doppler Current Profiler |
attribute | NC_GLOBAL | instruments_0_instrument_nid | String | 405 |
attribute | NC_GLOBAL | instruments_0_supplied_name | String | Acoustic Doppler Current Profiler |
attribute | NC_GLOBAL | keywords | String | bco, bco-dmo, biological, cast, chemical, data, dataset, date, day, day_local, depth, diff, dmo, erddap, iso, latitude, local, longitude, management, month, month_local, oceanography, office, preliminary, sta, start, time, time_diff, time_start_local, u, u_m, v, v_m, year |
attribute | NC_GLOBAL | license | String | https://www.bco-dmo.org/dataset/3713/license |
attribute | NC_GLOBAL | metadata_source | String | https://www.bco-dmo.org/api/dataset/3713 |
attribute | NC_GLOBAL | Northernmost_Northing | double | 41.3061 |
attribute | NC_GLOBAL | param_mapping | String | {'3713': {'depth': 'flag - depth', 'lon_start': 'flag - longitude', 'lat_start': 'flag - latitude'}} |
attribute | NC_GLOBAL | parameter_source | String | https://www.bco-dmo.org/mapserver/dataset/3713/parameters |
attribute | NC_GLOBAL | people_0_affiliation | String | University of Connecticut |
attribute | NC_GLOBAL | people_0_affiliation_acronym | String | UConn - Avery Point |
attribute | NC_GLOBAL | people_0_person_name | String | George B. McManus |
attribute | NC_GLOBAL | people_0_person_nid | String | 51375 |
attribute | NC_GLOBAL | people_0_role | String | Principal Investigator |
attribute | NC_GLOBAL | people_0_role_type | String | originator |
attribute | NC_GLOBAL | people_1_affiliation | String | Smith College |
attribute | NC_GLOBAL | people_1_person_name | String | Laura A. Katz |
attribute | NC_GLOBAL | people_1_person_nid | String | 51376 |
attribute | NC_GLOBAL | people_1_role | String | Co-Principal Investigator |
attribute | NC_GLOBAL | people_1_role_type | String | originator |
attribute | NC_GLOBAL | people_2_affiliation | String | University of Connecticut |
attribute | NC_GLOBAL | people_2_affiliation_acronym | String | UConn - Avery Point |
attribute | NC_GLOBAL | people_2_person_name | String | George B. McManus |
attribute | NC_GLOBAL | people_2_person_nid | String | 51375 |
attribute | NC_GLOBAL | people_2_role | String | Contact |
attribute | NC_GLOBAL | people_2_role_type | String | related |
attribute | NC_GLOBAL | people_3_affiliation | String | Woods Hole Oceanographic Institution |
attribute | NC_GLOBAL | people_3_affiliation_acronym | String | WHOI BCO-DMO |
attribute | NC_GLOBAL | people_3_person_name | String | Shannon Rauch |
attribute | NC_GLOBAL | people_3_person_nid | String | 51498 |
attribute | NC_GLOBAL | people_3_role | String | BCO-DMO Data Manager |
attribute | NC_GLOBAL | people_3_role_type | String | related |
attribute | NC_GLOBAL | project | String | CiliateSequencing |
attribute | NC_GLOBAL | projects_0_acronym | String | CiliateSequencing |
attribute | NC_GLOBAL | projects_0_description | String | The Ocean's biomass and diversity are predominantly microbial, yet this aspect of diversity remains underexplored. Efforts in recent years have begun to document microbial diversity in marine systems, and to elucidate the processes that structure assemblages across space and time. This project focuses on two important sister clades of microbial eukaryotes, the oligotrich and choreotrich ciliates. These organisms comprise a major component of planktonic food webs as they graze on phytoplankton, and are in turn eaten by zooplankton and larval fish. Earlier molecular work on ciliate diversity relied on light microscopy, construction of clone libraries and Sanger sequencing. This revealed a high degree of cryptic diversity (similar species that are genetically distinct), which is surprising, given the long-held idea that all microbes are globally distributed and that few species exist, at least as compared to animals and plants. This past work also showed that ciliate assemblages contain a few highly abundant forms and many rare ones, consistent with the concept of a "rare biosphere". However, these methods are limited by high costs of both labor and materials, so that efforts to sample any local assemblage comprehensively usually resulted in undersaturation (repeated sampling continued to uncover new species). Next generation approaches are needed to truly assess the depths of biodiversity in planktonic ciliates. This project brings together investigators with strengths in ecology, taxonomy and oceanography (PI McManus) and in molecular evolution, systematics and bioinformatics (PI Katz). Pyrosequencing will be used to sample the oligotrich and choreotrich ciliates ’to exhaustion’ in coastal environments. Denaturing gradient gel electrophoresis (DGGE), a technique that generates a fingerprint of the diversity in a sample, will be used to pre-select samples for pyrosequencing based on where strong gradients are observed in the composition of assemblages in relation to environmental factors (density fronts, thermolclines, etc.). Using these approaches, combined with the informatics pipeline already in place, this project will address three specific objectives: Objective 1. Determine the spatial scale of variability in ciliate diversity by measuring how ciliate assemblages change over meter, kilometer, 100 km, and basin scales. Objective 2. Assess the contributions of different size classes of ciliates to overall assemblage diversity. Objective 3. Experimentally evaluate factors that control the temporal shift of individual species from rarity to commonness in a natural assemblage, and vice versa. Note: See the related collaborative project, "Patterns of diversity in planktonic ciliates: spatio-temporal scales and community assembly in the coastal ocean", funded by awards OCE-1435515 and OCE-1436003. |
attribute | NC_GLOBAL | projects_0_end_date | String | 2015-08 |
attribute | NC_GLOBAL | projects_0_geolocation | String | NW Atlantic Continental Shelf |
attribute | NC_GLOBAL | projects_0_name | String | Diversity and dynamics of planktonic ciliates - what can next-generation sequencing technologies tell us? |
attribute | NC_GLOBAL | projects_0_project_nid | String | 2164 |
attribute | NC_GLOBAL | projects_0_project_website | String | http://microzooplankton.uconn.edu |
attribute | NC_GLOBAL | projects_0_start_date | String | 2012-07 |
attribute | NC_GLOBAL | publisher_name | String | Biological and Chemical Oceanographic Data Management Office (BCO-DMO) |
attribute | NC_GLOBAL | publisher_type | String | institution |
attribute | NC_GLOBAL | sourceUrl | String | (local files) |
attribute | NC_GLOBAL | Southernmost_Northing | double | 41.29669 |
attribute | NC_GLOBAL | standard_name_vocabulary | String | CF Standard Name Table v55 |
attribute | NC_GLOBAL | subsetVariables | String | month_local,day_local,year,time_diff |
attribute | NC_GLOBAL | summary | String | This dataset contains northward and eastward components of current velocity measured by Acoustic Doppler Current Profiler (ADCP). Velocity components are given at every 0.5 meter depth. |
attribute | NC_GLOBAL | title | String | [ADCP_Weicker] - Current velocities from ADCP from an R/V Lowell Weicker cruise in Fisher's Island Sound (NY/CT) in May 2012 (Diversity and dynamics of planktonic ciliates - what can next-generation sequencing technologies tell us?) |
attribute | NC_GLOBAL | version | String | 1 |
attribute | NC_GLOBAL | Westernmost_Easting | double | -71.99368 |
attribute | NC_GLOBAL | xml_source | String | osprey2erddap.update_xml() v1.3 |
variable | month_local | String | ||
attribute | month_local | bcodmo_name | String | month_local |
attribute | month_local | description | String | Two-digit month, local time (e.g. 05 = May) |
attribute | month_local | long_name | String | Month Local |
attribute | month_local | units | String | unitless |
variable | day_local | byte | ||
attribute | day_local | _FillValue | byte | 127 |
attribute | day_local | actual_range | byte | 30, 30 |
attribute | day_local | bcodmo_name | String | day_local |
attribute | day_local | description | String | 2-digit day of month, local time |
attribute | day_local | long_name | String | Day Local |
attribute | day_local | units | String | unitless |
variable | year | short | ||
attribute | year | _FillValue | short | 32767 |
attribute | year | actual_range | short | 2012, 2012 |
attribute | year | bcodmo_name | String | year |
attribute | year | description | String | 4-digit year, local time |
attribute | year | long_name | String | Year |
attribute | year | nerc_identifier | String | https://vocab.nerc.ac.uk/collection/P01/current/YEARXXXX/ |
attribute | year | units | String | unitless |
variable | sta | byte | ||
attribute | sta | _FillValue | byte | 127 |
attribute | sta | actual_range | byte | 1, 5 |
attribute | sta | bcodmo_name | String | sta |
attribute | sta | description | String | Station ID number. |
attribute | sta | long_name | String | Sta |
attribute | sta | units | String | unitless |
variable | cast | byte | ||
attribute | cast | _FillValue | byte | 127 |
attribute | cast | actual_range | byte | 0, 4 |
attribute | cast | bcodmo_name | String | cast |
attribute | cast | description | String | Cast number. |
attribute | cast | long_name | String | Cast |
attribute | cast | units | String | unitless |
variable | time_start_local | String | ||
attribute | time_start_local | bcodmo_name | String | time_start_local |
attribute | time_start_local | description | String | Local time at start of the measurements. |
attribute | time_start_local | long_name | String | Time Start Local |
attribute | time_start_local | units | String | HHMM.mm |
variable | latitude | double | ||
attribute | latitude | _CoordinateAxisType | String | Lat |
attribute | latitude | _FillValue | double | NaN |
attribute | latitude | actual_range | double | 41.29669, 41.3061 |
attribute | latitude | axis | String | Y |
attribute | latitude | bcodmo_name | String | lat_start |
attribute | latitude | colorBarMaximum | double | 90.0 |
attribute | latitude | colorBarMinimum | double | -90.0 |
attribute | latitude | description | String | Latitude at start of measurement. North = positive. |
attribute | latitude | ioos_category | String | Location |
attribute | latitude | long_name | String | Latitude |
attribute | latitude | nerc_identifier | String | https://vocab.nerc.ac.uk/collection/P09/current/LATX/ |
attribute | latitude | source_name | String | lat_start |
attribute | latitude | standard_name | String | latitude |
attribute | latitude | units | String | degrees_north |
variable | longitude | double | ||
attribute | longitude | _CoordinateAxisType | String | Lon |
attribute | longitude | _FillValue | double | NaN |
attribute | longitude | actual_range | double | -71.99368, -71.93639 |
attribute | longitude | axis | String | X |
attribute | longitude | bcodmo_name | String | lon_start |
attribute | longitude | colorBarMaximum | double | 180.0 |
attribute | longitude | colorBarMinimum | double | -180.0 |
attribute | longitude | description | String | Longitude at start of measurement. West = negative. |
attribute | longitude | ioos_category | String | Location |
attribute | longitude | long_name | String | Longitude |
attribute | longitude | nerc_identifier | String | https://vocab.nerc.ac.uk/collection/P09/current/LONX/ |
attribute | longitude | source_name | String | lon_start |
attribute | longitude | standard_name | String | longitude |
attribute | longitude | units | String | degrees_east |
variable | ISO_DateTime_Local | String | ||
attribute | ISO_DateTime_Local | bcodmo_name | String | ISO_DateTime_Local |
attribute | ISO_DateTime_Local | description | String | Date and time formatted to ISO8601 standard (local time). See time_diff for time zone info. Format: yyyy-MM-dd'T'HH:mm:ss'Z' |
attribute | ISO_DateTime_Local | long_name | String | ISO Date Time Local |
attribute | ISO_DateTime_Local | source_name | String | ISO_DateTime_Local |
attribute | ISO_DateTime_Local | time_precision | String | 1970-01-01T00:00:00Z |
attribute | ISO_DateTime_Local | units | String | unitless |
variable | time_diff | byte | ||
attribute | time_diff | _FillValue | byte | 127 |
attribute | time_diff | actual_range | byte | 4, 4 |
attribute | time_diff | bcodmo_name | String | time_offset |
attribute | time_diff | colorBarMaximum | double | 10.0 |
attribute | time_diff | colorBarMinimum | double | -10.0 |
attribute | time_diff | description | String | The number of hours added to local time to convert to GMT. |
attribute | time_diff | long_name | String | Time Diff |
attribute | time_diff | units | String | hours |
variable | depth | double | ||
attribute | depth | _CoordinateAxisType | String | Height |
attribute | depth | _CoordinateZisPositive | String | down |
attribute | depth | _FillValue | double | NaN |
attribute | depth | actual_range | double | 1.5, 25.0 |
attribute | depth | axis | String | Z |
attribute | depth | bcodmo_name | String | depth |
attribute | depth | colorBarMaximum | double | 8000.0 |
attribute | depth | colorBarMinimum | double | -8000.0 |
attribute | depth | colorBarPalette | String | TopographyDepth |
attribute | depth | description | String | Depth, in meters. Velocity components are given at every 0.5 meter. |
attribute | depth | ioos_category | String | Location |
attribute | depth | long_name | String | Depth |
attribute | depth | nerc_identifier | String | https://vocab.nerc.ac.uk/collection/P09/current/DEPH/ |
attribute | depth | positive | String | down |
attribute | depth | standard_name | String | depth |
attribute | depth | units | String | m |
variable | u_m | float | ||
attribute | u_m | _FillValue | float | NaN |
attribute | u_m | actual_range | float | -0.2936, 0.5865 |
attribute | u_m | bcodmo_name | String | u_m |
attribute | u_m | description | String | Eastward component of current velocity, in meters per second. Eastward flow is positive. |
attribute | u_m | long_name | String | U M |
attribute | u_m | nerc_identifier | String | https://vocab.nerc.ac.uk/collection/P01/current/LCEWZZ01/ |
attribute | u_m | units | String | m/s |
variable | v_m | float | ||
attribute | v_m | _FillValue | float | NaN |
attribute | v_m | actual_range | float | -0.1182, 0.2457 |
attribute | v_m | bcodmo_name | String | v_m |
attribute | v_m | description | String | Northward component of current velocity, in meters per second. Northward flow is positive. |
attribute | v_m | long_name | String | V M |
attribute | v_m | nerc_identifier | String | https://vocab.nerc.ac.uk/collection/P01/current/LCNSZZ01/ |
attribute | v_m | units | String | m/s |
The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.