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Grid DAP Data | Sub- set | Table DAP Data | Make A Graph | W M S | Source Data Files | Acces- sible | Title | Sum- mary | FGDC, ISO, Metadata | Back- ground Info | RSS | E | Institution | Dataset ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
data | graph | files | public | [cruise track AE1103] - Cruise track from R/V Atlantic Explorer AE1103 in the BATS site from March 2011 (Ocean Microbial Observatory project) (Transitions in the Surface Layer and the Role of Vertically Stratified Microbial Communities in the Carbon Cycle - An Oceanic Microbial Observatory) | F I M | background | BCO-DMO | bcodmo_dataset_543658 |
Row Type | Variable Name | Attribute Name | Data Type | Value |
---|---|---|---|---|
attribute | NC_GLOBAL | access_formats | String | .htmlTable,.csv,.json,.mat,.nc,.tsv,.esriCsv,.geoJson,.odvTxt |
attribute | NC_GLOBAL | acquisition_description | String | Control point navigation was obtained from the R2R catalog: [https://www.rvdata.us/search/cruise/AE1103](\\"https://www.rvdata.us/search/cruise/AE1103\\") |
attribute | NC_GLOBAL | awards_0_award_nid | String | 514363 |
attribute | NC_GLOBAL | awards_0_award_number | String | OCE-0802004 |
attribute | NC_GLOBAL | awards_0_data_url | String | http://www.nsf.gov/awardsearch/showAward?AWD_ID=0802004 |
attribute | NC_GLOBAL | awards_0_funder_name | String | NSF Division of Ocean Sciences |
attribute | NC_GLOBAL | awards_0_funding_acronym | String | NSF OCE |
attribute | NC_GLOBAL | awards_0_funding_source_nid | String | 355 |
attribute | NC_GLOBAL | awards_0_program_manager | String | David L. Garrison |
attribute | NC_GLOBAL | awards_0_program_manager_nid | String | 50534 |
attribute | NC_GLOBAL | cdm_data_type | String | Other |
attribute | NC_GLOBAL | comment | String | Cruise track for deployment AE1103 Project: Ocean Microbial Observatory PIs: Carlson (UCSB) and Giovanonni (OSU) version 20141222 |
attribute | NC_GLOBAL | Conventions | String | COARDS, CF-1.6, ACDD-1.3 |
attribute | NC_GLOBAL | creator_email | String | info at bco-dmo.org |
attribute | NC_GLOBAL | creator_name | String | BCO-DMO |
attribute | NC_GLOBAL | creator_type | String | institution |
attribute | NC_GLOBAL | creator_url | String | https://www.bco-dmo.org/ |
attribute | NC_GLOBAL | data_source | String | extract_data_as_tsv version 2.3 19 Dec 2019 |
attribute | NC_GLOBAL | date_created | String | 2014-12-22T20:38:47Z |
attribute | NC_GLOBAL | date_modified | String | 2019-09-04T14:49:25Z |
attribute | NC_GLOBAL | defaultDataQuery | String | &time<now |
attribute | NC_GLOBAL | doi | String | 10.1575/1912/bco-dmo.543658.1 |
attribute | NC_GLOBAL | Easternmost_Easting | double | 32.394645 |
attribute | NC_GLOBAL | geospatial_lat_max | double | -64.46946 |
attribute | NC_GLOBAL | geospatial_lat_min | double | -64.693767 |
attribute | NC_GLOBAL | geospatial_lat_units | String | degrees_north |
attribute | NC_GLOBAL | geospatial_lon_max | double | 32.394645 |
attribute | NC_GLOBAL | geospatial_lon_min | double | 32.148585 |
attribute | NC_GLOBAL | geospatial_lon_units | String | degrees_east |
attribute | NC_GLOBAL | infoUrl | String | https://www.bco-dmo.org/dataset/543658 |
attribute | NC_GLOBAL | institution | String | BCO-DMO |
attribute | NC_GLOBAL | instruments_0_acronym | String | GPS |
attribute | NC_GLOBAL | instruments_0_dataset_instrument_nid | String | 543663 |
attribute | NC_GLOBAL | instruments_0_description | String | The Global Positioning System (GPS) is a U.S. space-based radionavigation system that provides reliable positioning, navigation, and timing services to civilian users on a continuous worldwide basis. The U.S. Air Force develops, maintains, and operates the space and control segments of the NAVSTAR GPS transmitter system. Ships use a variety of receivers (e.g. Trimble and Ashtech) to interpret the GPS signal and determine accurate latitude and longitude. |
attribute | NC_GLOBAL | instruments_0_instrument_external_identifier | String | https://vocab.nerc.ac.uk/collection/L05/current/POS03/ |
attribute | NC_GLOBAL | instruments_0_instrument_name | String | Global Positioning System Receiver |
attribute | NC_GLOBAL | instruments_0_instrument_nid | String | 560 |
attribute | NC_GLOBAL | instruments_0_supplied_name | String | GPS |
attribute | NC_GLOBAL | keywords | String | bco, bco-dmo, biological, chemical, data, dataset, date, dmo, erddap, iso, latitude, longitude, management, oceanography, office, preliminary, time |
attribute | NC_GLOBAL | license | String | https://www.bco-dmo.org/dataset/543658/license |
attribute | NC_GLOBAL | metadata_source | String | https://www.bco-dmo.org/api/dataset/543658 |
attribute | NC_GLOBAL | Northernmost_Northing | double | -64.46946 |
attribute | NC_GLOBAL | param_mapping | String | {'543658': {'lat': 'master - latitude', 'lon': 'master - longitude', 'ISO_DateTime_UTC': 'master - time'}} |
attribute | NC_GLOBAL | parameter_source | String | https://www.bco-dmo.org/mapserver/dataset/543658/parameters |
attribute | NC_GLOBAL | people_0_affiliation | String | University of California-Santa Barbara |
attribute | NC_GLOBAL | people_0_affiliation_acronym | String | UCSB-MSI |
attribute | NC_GLOBAL | people_0_person_name | String | Craig Carlson |
attribute | NC_GLOBAL | people_0_person_nid | String | 50575 |
attribute | NC_GLOBAL | people_0_role | String | Lead Principal Investigator |
attribute | NC_GLOBAL | people_0_role_type | String | originator |
attribute | NC_GLOBAL | people_1_affiliation | String | Woods Hole Oceanographic Institution |
attribute | NC_GLOBAL | people_1_affiliation_acronym | String | WHOI BCO-DMO |
attribute | NC_GLOBAL | people_1_person_name | String | Nancy Copley |
attribute | NC_GLOBAL | people_1_person_nid | String | 50396 |
attribute | NC_GLOBAL | people_1_role | String | BCO-DMO Data Manager |
attribute | NC_GLOBAL | people_1_role_type | String | related |
attribute | NC_GLOBAL | project | String | Ocean Microbial Observatory |
attribute | NC_GLOBAL | projects_0_acronym | String | Ocean Microbial Observatory |
attribute | NC_GLOBAL | projects_0_description | String | (Adapted from the NSF award abstract) The premise of this project is that stratified bacterioplankton clades engage in specialized biogeochemical activities that can be identified by integrated oceanographic and microbiological approaches. Specifically, the objective of this project is to assess if the mesopelagic microbial community rely on diagenetically altered organic matter and subcellular fragments that are produced by microbial processes in the euphotic zone and delivered into the upper mesopelagic by sinking or mixing. In past efforts this microbial observatory had greater success cultivating members of the euphotic zone microbial community, and revealed an unanticipated growth requirement for reduced sulfur compounds in alphaproteobacteria of the SAR11 clade. Genomic information showed that intense competition for substrates imposes trade-offs on bacterioplankton - there are regions of N dimensional nutrient space where specialists win. We postulate that specific growth requirements may explain some the regular spatial and temporal patterns that have been observed in upper mesopelagic bacterioplankton communities, and the difficulties of culturing some of these organisms. The specific objectives of this project are: 1) to produce 13C and 15N labeled subcellular (e.g., soluble, cell wall, and membrane) and DOM fractions from photosynthetic plankton cultures and use stable isotope probing to identify specific clades in the surface and upper mesopelagic microbial community that assimilate fractions of varying composition and lability. 2) to use fluorescence in situ hybridization approaches to monitor temporal and spatial variability of specific microbial populations identified from the SIP and HTC experiments. To increase resolution we will use CARD-FISH protocols. 3) to measure the proteomes of bacterioplankton communities to identify highly translated genes in the surface layer and upper mesopelagic, and community responses to seasonal nutrient limitation. 4) and, to cultivate these organisms via high throughput culturing (HTC) by pursuing the hypothesis that they require specific nutrient factors and/or diagenetically altered organic substrates. Complete genome sequences from key organisms will be sought and used as queries to study patterns of natural variation in genes and populations that have been associated with biogeochemically important functions. |
attribute | NC_GLOBAL | projects_0_end_date | String | 2014-07 |
attribute | NC_GLOBAL | projects_0_geolocation | String | Bermuda Atlantic Time-Series study site |
attribute | NC_GLOBAL | projects_0_name | String | Transitions in the Surface Layer and the Role of Vertically Stratified Microbial Communities in the Carbon Cycle - An Oceanic Microbial Observatory |
attribute | NC_GLOBAL | projects_0_project_nid | String | 514365 |
attribute | NC_GLOBAL | projects_0_project_website | String | http://www.bios.edu/research/projects/oceanic-microbial-observatory/ |
attribute | NC_GLOBAL | projects_0_start_date | String | 2008-08 |
attribute | NC_GLOBAL | publisher_name | String | Biological and Chemical Oceanographic Data Management Office (BCO-DMO) |
attribute | NC_GLOBAL | publisher_type | String | institution |
attribute | NC_GLOBAL | sourceUrl | String | (local files) |
attribute | NC_GLOBAL | Southernmost_Northing | double | -64.693767 |
attribute | NC_GLOBAL | standard_name_vocabulary | String | CF Standard Name Table v55 |
attribute | NC_GLOBAL | summary | String | Cruise track from R/V Atlantic Explorer AE1103 in the BATS site from March 2011. |
attribute | NC_GLOBAL | time_coverage_end | String | 2011-03-10T15:00:02.00Z |
attribute | NC_GLOBAL | time_coverage_start | String | 2011-03-09T16:04:02.00Z |
attribute | NC_GLOBAL | title | String | [cruise track AE1103] - Cruise track from R/V Atlantic Explorer AE1103 in the BATS site from March 2011 (Ocean Microbial Observatory project) (Transitions in the Surface Layer and the Role of Vertically Stratified Microbial Communities in the Carbon Cycle - An Oceanic Microbial Observatory) |
attribute | NC_GLOBAL | version | String | 1 |
attribute | NC_GLOBAL | Westernmost_Easting | double | 32.148585 |
attribute | NC_GLOBAL | xml_source | String | osprey2erddap.update_xml() v1.3 |
variable | time | double | ||
attribute | time | _CoordinateAxisType | String | Time |
attribute | time | actual_range | double | 1.299686642E9, 1.299769202E9 |
attribute | time | axis | String | T |
attribute | time | bcodmo_name | String | ISO_DateTime_UTC |
attribute | time | description | String | Date/Time (UTC) ISO formatted. This standard is based on ISO 8601:2004(E). |
attribute | time | ioos_category | String | Time |
attribute | time | long_name | String | ISO Date Time UTC |
attribute | time | nerc_identifier | String | https://vocab.nerc.ac.uk/collection/P01/current/DTUT8601/ |
attribute | time | source_name | String | ISO_DateTime_UTC |
attribute | time | standard_name | String | time |
attribute | time | time_origin | String | 01-JAN-1970 00:00:00 |
attribute | time | time_precision | String | 1970-01-01T00:00:00.00Z |
attribute | time | units | String | seconds since 1970-01-01T00:00:00Z |
variable | latitude | double | ||
attribute | latitude | _CoordinateAxisType | String | Lat |
attribute | latitude | _FillValue | double | NaN |
attribute | latitude | actual_range | double | -64.693767, -64.46946 |
attribute | latitude | axis | String | Y |
attribute | latitude | bcodmo_name | String | latitude |
attribute | latitude | colorBarMaximum | double | 90.0 |
attribute | latitude | colorBarMinimum | double | -90.0 |
attribute | latitude | description | String | Latitude component of geographic position; north is positive. |
attribute | latitude | ioos_category | String | Location |
attribute | latitude | long_name | String | Latitude |
attribute | latitude | nerc_identifier | String | https://vocab.nerc.ac.uk/collection/P09/current/LATX/ |
attribute | latitude | standard_name | String | latitude |
attribute | latitude | units | String | degrees_north |
variable | longitude | double | ||
attribute | longitude | _CoordinateAxisType | String | Lon |
attribute | longitude | _FillValue | double | NaN |
attribute | longitude | actual_range | double | 32.148585, 32.394645 |
attribute | longitude | axis | String | X |
attribute | longitude | bcodmo_name | String | longitude |
attribute | longitude | colorBarMaximum | double | 180.0 |
attribute | longitude | colorBarMinimum | double | -180.0 |
attribute | longitude | description | String | Longitude component of geographic position; east is positive. |
attribute | longitude | ioos_category | String | Location |
attribute | longitude | long_name | String | Longitude |
attribute | longitude | nerc_identifier | String | https://vocab.nerc.ac.uk/collection/P09/current/LONX/ |
attribute | longitude | standard_name | String | longitude |
attribute | longitude | units | String | degrees_east |
The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.