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Grid DAP Data | Sub- set | Table DAP Data | Make A Graph | W M S | Source Data Files | Acces- sible | Title | Sum- mary | FGDC, ISO, Metadata | Back- ground Info | RSS | E | Institution | Dataset ID |
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data | graph | files | public | [Pleurochrysis carterae 24 hour culture dynamics] - Pleurochrysis carterae diel culture dynamics analyzed at Bigelow Laboratory from 2013 (OA Copes Coccoliths project) (Effects of ocean acidification on Emiliania huxleyi and Calanus finmarchicus; insights into the oceanic alkalinity and biological carbon pumps) | I M | background | BCO-DMO | bcodmo_dataset_660194 |
Row Type | Variable Name | Attribute Name | Data Type | Value |
---|---|---|---|---|
attribute | NC_GLOBAL | access_formats | String | .htmlTable,.csv,.json,.mat,.nc,.tsv |
attribute | NC_GLOBAL | acquisition_description | String | Cultures:\u00a0Pleurochrysis\u00a0carterae\u00a0cultures were maintained in exponential growth phase under axenic conditions in semi-continuous batch culture using L1-Si media prepared on 0.2 um-filtered, UV-sterilized, autoclaved seawater.\u00a0 Cultures were acclimated to one of three\u00a0pCO2\u00a0treatments for > 9 generations before experiments were performed.\u00a0 Cultures were maintained in an incubator at 16.5 +/- 0.5 \u00a0degrees C and 470 umol photons/m-2/s\u00a0PAR on a 14-10 light-dark cycle where the lights turned on at 6 am and turned off at 8 pm. pCO2\u00a0Treatments: Carbonate chemistry was manipulated by bubbling cultures and prepared media with 500 mL/min\u00a0with 0.2 um-filtered 280, 380, or 750 ppm\u00a0pCO2\u00a0air.\u00a0 The\u00a0pCO2\u00a0levels of the treatment air were established using two mass flow controllers (Aalborg, Orangeburg, NY, USA) for each treatment to precisely mix in-house compressed air and pure CO2\u00a0(Maine Oxy, Auburn, ME, USA).\u00a0 The in-house compressed air was stripped of CO2\u00a0to less than 10 ppm CO2\u00a0using a Puregas VCD CO2\u00a0Adsorber (Puregas, LLC, Broomfield, CO, USA).\u00a0 The\u00a0pCO2\u00a0of the gas mixtures was stable to +/- 8 ppm.\u00a0\u00a0pCO2\u00a0values of the cultures may be different than the target levels due to biological activity. 24 h Culture Dynamics Monitoring:\u00a0 To understand the chemical and biological culture dynamics over a 24 h period, the investigators took measurements of one culture from each\u00a0pCO2\u00a0treatment every hour for 24 h.\u00a0 To reduce analytical costs, some parameters were not measured each hour (PIC, nutrients, total alkalinity).\u00a0 During the dark period, a red lamp was used to limit the light that might influence the cultures. \u00a0 pH Measurements:\u00a0 The pH of the cultures was measured using an OrionTM\u00a0ROSSTM\u00a0electrode connected to an Orion StarTM\u00a0A211 Benchtop pH meter (ThermoFisher Scientific, Waltham, MA, USA), calibrated with NBS buffers (EK Industries, Inc., Joliet, IL, USA) and corrected to the total scale using spectrophotometric pH measurements of culture samples.\u00a0 Spectrophotometric pH measurements of 0.2 um-filtered culture samples were made with 20 mM\u00a0m-Cresol purple sodium salt indicator dye (Alfa Aesar, Ward Hill, MA, USA) using a Hitachi U-3010 spectrophotometer (Hitachi High- Technologies, Clarksburg, MD, USA) equipped with a water circulated cell holder connected to a VWR 1160 water bath (VWR, Radnor, PA, USA) set at 16.5 degrees C, holding a 1 cm quartz cell.\u00a0 The method followed the procedure described by Clayton and Byrne (1993) and Dickson et al. (2007), using the refit equation of Liu et al. (2011), resulting in a resolution of +/-0.004 pH units. \u00a0 Temperature:\u00a0Temperature measurements were made with an OrionTM\u00a0ROSSTM\u00a0electrode connected to an Orion StarTM\u00a0A211 Benchtop pH meter (ThermoFisher Scientific, Waltham, MA, USA). Salinity:\u00a0 Salinity was measured using an Acorn SALT 6 handheld salinity meter (Oakton Instruments, Vernon Hills, IL, USA) with a resolution of +/- 0.1 ppt. in vivo Fluorescence:\u00a0 Fluoresence was measured using a Turner 10-AU fluorometer (Turner Designs, Sunnyvale, CA, USA). Cell density and cell diameter: Culture density and mean cell diameter were measured using a Moxi Z mini automated cell counter (ORFLO Technologies, Ketchum, ID, USA), which has a coefficient of variation of 4%. Particulate Inorganic Carbon:\u00a0 Bulk culture PIC analyses followed the technique of Fernandez et al. (1993): 10 mL culture samples were filtered onto 0.4 um polycarbonate filters and rinsed with potassium borate buffer with the pH adjusted to 8.0 to remove seawater calcium chloride.\u00a0 Filters were carefully moved to trace-metal free centrifuge tubes and digested with 5 mL of 5% nitric acid.\u00a0 The calcium concentration was measured using a Jobin Yvon Ultima C inductively coupled plasma-atomic emission spectrometer (ICP- AES, HORIBA, Ltd., Kyoto, Japan).\u00a0 Bulk culture PIC measurements were corrected to PIC/cell-1\u00a0using the corresponding cell density measurements. Nutrients (measured at University of California Santa Barbara):\u00a0 Culture samples were filtered to 0.2 um to remove all algal cells and coccoliths, and samples were frozen prior to analysis.\u00a0 Total N (nitrate + nitrite), nitrate, phosphate, and silicate were measured by Flow Injection Analysis at the University of California, Santa Barbara, Marine Science Institute\u2019s Analytical Lab using a QuikChem 8000 (Lachat Instruments, Loveland, CO, USA). Nutrients (measured by Bigelow Analytical Services):\u00a0 Culture samples were filtered to 0.2 um to remove all algal cells and coccoliths, and samples were frozen prior to analysis.\u00a0 Nitrate and phosphate were measured by Continuous Flow Analysis by Bigelow Analytical Services using a SEAL AutoAnalyzer 3 HR (SEAL Analytical Inc., Mequon, WI, USA). Total Alkalinity:\u00a0 Culture samples were filtered to 0.2 um to remove all algal cells and coccoliths.\u00a0 Total alkalinity was measured via titration with 0.01 N HCl using a Metrohm Titrando 888 controlled by Tiamo software (Metrohm, Riverview, FL, USA) to perform automated Gran titrations of 4 mL samples.\u00a0 Titrations were corrected to Certified Reference Materials (supplied by the laboratory of Andrew Dickson, Scripps Institution of Oceanography, La Jolla, CA, USA). |
attribute | NC_GLOBAL | awards_0_award_nid | String | 514411 |
attribute | NC_GLOBAL | awards_0_award_number | String | OCE-1220068 |
attribute | NC_GLOBAL | awards_0_data_url | String | http://nsf.gov/awardsearch/showAward?AWD_ID=1220068 |
attribute | NC_GLOBAL | awards_0_funder_name | String | NSF Division of Ocean Sciences |
attribute | NC_GLOBAL | awards_0_funding_acronym | String | NSF OCE |
attribute | NC_GLOBAL | awards_0_funding_source_nid | String | 355 |
attribute | NC_GLOBAL | awards_0_program_manager | String | David L. Garrison |
attribute | NC_GLOBAL | awards_0_program_manager_nid | String | 50534 |
attribute | NC_GLOBAL | cdm_data_type | String | Other |
attribute | NC_GLOBAL | comment | String | 24 Hour Culture Dynamics W. Balch and D. Fields, PIs Version 28 September 2016 |
attribute | NC_GLOBAL | Conventions | String | COARDS, CF-1.6, ACDD-1.3 |
attribute | NC_GLOBAL | creator_email | String | info at bco-dmo.org |
attribute | NC_GLOBAL | creator_name | String | BCO-DMO |
attribute | NC_GLOBAL | creator_type | String | institution |
attribute | NC_GLOBAL | creator_url | String | https://www.bco-dmo.org/ |
attribute | NC_GLOBAL | data_source | String | extract_data_as_tsv version 2.3 19 Dec 2019 |
attribute | NC_GLOBAL | date_created | String | 2016-09-29T19:04:44Z |
attribute | NC_GLOBAL | date_modified | String | 2019-06-11T15:43:42Z |
attribute | NC_GLOBAL | defaultDataQuery | String | &time<now |
attribute | NC_GLOBAL | doi | String | 10.1575/1912/bco-dmo.660194.1 |
attribute | NC_GLOBAL | infoUrl | String | https://www.bco-dmo.org/dataset/660194 |
attribute | NC_GLOBAL | institution | String | BCO-DMO |
attribute | NC_GLOBAL | instruments_0_acronym | String | Nutrient Autoanalyzer |
attribute | NC_GLOBAL | instruments_0_dataset_instrument_description | String | Continuous flow analysis performed by Bigelow Analytical Services (SEAL Analytical Inc., Mequon, WI, USA). |
attribute | NC_GLOBAL | instruments_0_dataset_instrument_nid | String | 663847 |
attribute | NC_GLOBAL | instruments_0_description | String | Nutrient Autoanalyzer is a generic term used when specific type, make and model were not specified. In general, a Nutrient Autoanalyzer is an automated flow-thru system for doing nutrient analysis (nitrate, ammonium, orthophosphate, and silicate) on seawater samples. |
attribute | NC_GLOBAL | instruments_0_instrument_external_identifier | String | https://vocab.nerc.ac.uk/collection/L05/current/LAB04/ |
attribute | NC_GLOBAL | instruments_0_instrument_name | String | Nutrient Autoanalyzer |
attribute | NC_GLOBAL | instruments_0_instrument_nid | String | 558 |
attribute | NC_GLOBAL | instruments_0_supplied_name | String | SEAL AutoAnalyzer 3 HR |
attribute | NC_GLOBAL | instruments_1_acronym | String | pH Sensor |
attribute | NC_GLOBAL | instruments_1_dataset_instrument_description | String | Orion ROSS electrode was connected to an Orion Star A211 Benchtop pH meter (ThermoFisher Scientific, Waltham, MA, USA) |
attribute | NC_GLOBAL | instruments_1_dataset_instrument_nid | String | 660206 |
attribute | NC_GLOBAL | instruments_1_description | String | General term for an instrument that measures the pH or how acidic or basic a solution is. |
attribute | NC_GLOBAL | instruments_1_instrument_name | String | pH Sensor |
attribute | NC_GLOBAL | instruments_1_instrument_nid | String | 674 |
attribute | NC_GLOBAL | instruments_1_supplied_name | String | Orion ROSS electrode |
attribute | NC_GLOBAL | instruments_2_acronym | String | Automatic titrator |
attribute | NC_GLOBAL | instruments_2_dataset_instrument_description | String | Automatic titrations controlled by Tiamo software (Metrohm, Riverview, FL, USA). |
attribute | NC_GLOBAL | instruments_2_dataset_instrument_nid | String | 660211 |
attribute | NC_GLOBAL | instruments_2_description | String | Instruments that incrementally add quantified aliquots of a reagent to a sample until the end-point of a chemical reaction is reached. |
attribute | NC_GLOBAL | instruments_2_instrument_external_identifier | String | https://vocab.nerc.ac.uk/collection/L05/current/LAB12/ |
attribute | NC_GLOBAL | instruments_2_instrument_name | String | Automatic titrator |
attribute | NC_GLOBAL | instruments_2_instrument_nid | String | 682 |
attribute | NC_GLOBAL | instruments_2_supplied_name | String | Metrohm Titrando 888 |
attribute | NC_GLOBAL | instruments_3_acronym | String | Spectrophotometer |
attribute | NC_GLOBAL | instruments_3_dataset_instrument_description | String | Spectrophotometric pH measurements were taken of culture samples |
attribute | NC_GLOBAL | instruments_3_dataset_instrument_nid | String | 660207 |
attribute | NC_GLOBAL | instruments_3_description | String | An instrument used to measure the relative absorption of electromagnetic radiation of different wavelengths in the near infra-red, visible and ultraviolet wavebands by samples. |
attribute | NC_GLOBAL | instruments_3_instrument_external_identifier | String | https://vocab.nerc.ac.uk/collection/L05/current/LAB20/ |
attribute | NC_GLOBAL | instruments_3_instrument_name | String | Spectrophotometer |
attribute | NC_GLOBAL | instruments_3_instrument_nid | String | 707 |
attribute | NC_GLOBAL | instruments_3_supplied_name | String | Hitachi U-3010 spectrophotometer |
attribute | NC_GLOBAL | instruments_4_acronym | String | Salinity Sensor |
attribute | NC_GLOBAL | instruments_4_dataset_instrument_description | String | Salinity measured using this instrument with a resolution of +/- 0.1 ppt (Oakton Instruments, Vernon Hills, IL, USA) |
attribute | NC_GLOBAL | instruments_4_dataset_instrument_nid | String | 660208 |
attribute | NC_GLOBAL | instruments_4_description | String | Category of instrument that simultaneously measures electrical conductivity and temperature in the water column to provide temperature and salinity data. |
attribute | NC_GLOBAL | instruments_4_instrument_external_identifier | String | https://vocab.nerc.ac.uk/collection/L05/current/350/ |
attribute | NC_GLOBAL | instruments_4_instrument_name | String | Salinity Sensor |
attribute | NC_GLOBAL | instruments_4_instrument_nid | String | 710 |
attribute | NC_GLOBAL | instruments_4_supplied_name | String | Acorn SALT 6 handheld salinity meter |
attribute | NC_GLOBAL | instruments_5_acronym | String | MFC |
attribute | NC_GLOBAL | instruments_5_dataset_instrument_description | String | Indicate and control set flow rates of gases. Manufactured in Orangeburg, NY USA. |
attribute | NC_GLOBAL | instruments_5_dataset_instrument_nid | String | 660203 |
attribute | NC_GLOBAL | instruments_5_description | String | Mass Flow Controller (MFC) - A device used to measure and control the flow of fluids and gases |
attribute | NC_GLOBAL | instruments_5_instrument_name | String | Mass Flow Controller |
attribute | NC_GLOBAL | instruments_5_instrument_nid | String | 712 |
attribute | NC_GLOBAL | instruments_5_supplied_name | String | Aalborg Mass Flow Controller |
attribute | NC_GLOBAL | instruments_6_acronym | String | ICP-OES |
attribute | NC_GLOBAL | instruments_6_dataset_instrument_description | String | Calcium concentration measured (ICP-AES, HORIBA, Ltd., Kyoto, Japan). |
attribute | NC_GLOBAL | instruments_6_dataset_instrument_nid | String | 660209 |
attribute | NC_GLOBAL | instruments_6_description | String | Also referred to as an Inductively coupled plasma atomic emission spectroscope (ICP-AES). These instruments pass nebulised samples into an inductively-coupled gas plasma (8-10000 K) where they are atomised and excited. The de-excitation optical emissions at characteristic wavelengths are spectroscopically analysed. It is often used in the detection of trace metals. |
attribute | NC_GLOBAL | instruments_6_instrument_name | String | Inductively Coupled Plasma Optical Emission Spectrometer |
attribute | NC_GLOBAL | instruments_6_instrument_nid | String | 639924 |
attribute | NC_GLOBAL | instruments_6_supplied_name | String | Jobin Yvon Ultima C |
attribute | NC_GLOBAL | instruments_7_acronym | String | CO2 Adsorber |
attribute | NC_GLOBAL | instruments_7_dataset_instrument_description | String | Instrument stripped compressed air of CO2 |
attribute | NC_GLOBAL | instruments_7_dataset_instrument_nid | String | 660204 |
attribute | NC_GLOBAL | instruments_7_description | String | CO2 Adsorber - an instrument designed to remove CO2 and moisture from compressed air. |
attribute | NC_GLOBAL | instruments_7_instrument_name | String | CO2 Adsorber |
attribute | NC_GLOBAL | instruments_7_instrument_nid | String | 651526 |
attribute | NC_GLOBAL | instruments_7_supplied_name | String | Puregas VCD CO2 Adsorber |
attribute | NC_GLOBAL | instruments_8_acronym | String | ACC |
attribute | NC_GLOBAL | instruments_8_dataset_instrument_description | String | Measures culture density |
attribute | NC_GLOBAL | instruments_8_dataset_instrument_nid | String | 660205 |
attribute | NC_GLOBAL | instruments_8_description | String | Automated Cell Counter (ACC) - a tool used for counting live and/or dead cells in a culture. It can also be used to size particles. |
attribute | NC_GLOBAL | instruments_8_instrument_name | String | Automated Cell Counter |
attribute | NC_GLOBAL | instruments_8_instrument_nid | String | 651528 |
attribute | NC_GLOBAL | instruments_8_supplied_name | String | Moxi Z Automated Cell Counter |
attribute | NC_GLOBAL | keywords | String | approx, approx_time, bco, bco-dmo, biological, calcite, carbon, carbon dioxide, carbonate, cell, cell_density, chemical, chemistry, co2, co3, concentration, cper, data, dataset, date, density, diameter, dic, dioxide, dmo, earth, Earth Science > Oceans > Ocean Chemistry > Nitrate, Earth Science > Oceans > Ocean Chemistry > pH, Earth Science > Oceans > Ocean Chemistry > Phosphate, Earth Science > Oceans > Salinity/Density > Salinity, elapsed, elapsed_time, erddap, fluorescence, fluorescencePerCellDensity, hco3, inVivo_fluorescence, iso, light, management, mass, mass_concentration_of_phosphate_in_sea_water, mean, mean_cellDiameter, mean_SiO4, mole, mole_concentration_of_nitrate_in_sea_water, n02, nitrate, no3, NO3_Bigelow, NO3_NO2, NO3_UCSB, ocean, oceanography, oceans, office, omega, omega_calcite, pCO2, pCO2_treatment, per, phosphate, pic, PIC_pgCPerCell, PIC_ugCPerL, po4, PO4_Bigelow, PO4_UCSB, practical, preliminary, reported, salinity, scale, science, sea, sea_water_ph_reported_on_total_scale, sea_water_practical_salinity, seawater, SiO4, temperature, time, time2, total, treatment, vivo, water |
attribute | NC_GLOBAL | keywords_vocabulary | String | GCMD Science Keywords |
attribute | NC_GLOBAL | license | String | https://www.bco-dmo.org/dataset/660194/license |
attribute | NC_GLOBAL | metadata_source | String | https://www.bco-dmo.org/api/dataset/660194 |
attribute | NC_GLOBAL | param_mapping | String | {'660194': {'ISO_DateTime_UTC': 'flag - time'}} |
attribute | NC_GLOBAL | parameter_source | String | https://www.bco-dmo.org/mapserver/dataset/660194/parameters |
attribute | NC_GLOBAL | people_0_affiliation | String | Bigelow Laboratory for Ocean Sciences |
attribute | NC_GLOBAL | people_0_person_name | String | William M. Balch |
attribute | NC_GLOBAL | people_0_person_nid | String | 50650 |
attribute | NC_GLOBAL | people_0_role | String | Principal Investigator |
attribute | NC_GLOBAL | people_0_role_type | String | originator |
attribute | NC_GLOBAL | people_1_affiliation | String | Bigelow Laboratory for Ocean Sciences |
attribute | NC_GLOBAL | people_1_person_name | String | David Fields |
attribute | NC_GLOBAL | people_1_person_nid | String | 51141 |
attribute | NC_GLOBAL | people_1_role | String | Co-Principal Investigator |
attribute | NC_GLOBAL | people_1_role_type | String | originator |
attribute | NC_GLOBAL | people_2_affiliation | String | Bigelow Laboratory for Ocean Sciences |
attribute | NC_GLOBAL | people_2_person_name | String | William M. Balch |
attribute | NC_GLOBAL | people_2_person_nid | String | 50650 |
attribute | NC_GLOBAL | people_2_role | String | Contact |
attribute | NC_GLOBAL | people_2_role_type | String | related |
attribute | NC_GLOBAL | people_3_affiliation | String | Bigelow Laboratory for Ocean Sciences |
attribute | NC_GLOBAL | people_3_person_name | String | Meredith White |
attribute | NC_GLOBAL | people_3_person_nid | String | 514420 |
attribute | NC_GLOBAL | people_3_role | String | Contact |
attribute | NC_GLOBAL | people_3_role_type | String | related |
attribute | NC_GLOBAL | people_4_affiliation | String | Woods Hole Oceanographic Institution |
attribute | NC_GLOBAL | people_4_affiliation_acronym | String | WHOI BCO-DMO |
attribute | NC_GLOBAL | people_4_person_name | String | Hannah Ake |
attribute | NC_GLOBAL | people_4_person_nid | String | 650173 |
attribute | NC_GLOBAL | people_4_role | String | BCO-DMO Data Manager |
attribute | NC_GLOBAL | people_4_role_type | String | related |
attribute | NC_GLOBAL | project | String | OA_Copes_Coccoliths |
attribute | NC_GLOBAL | projects_0_acronym | String | OA_Copes_Coccoliths |
attribute | NC_GLOBAL | projects_0_description | String | (Extracted from the NSF award abstract) Ocean acidification is one of the most pressing marine science issues of our time, with potential biological impacts spanning all marine phyla and potential societal impacts affecting man's relationship to the sea. Rising levels of atmospheric pCO2 are increasing the acidity of the world oceans. It is generally held that average surface ocean pH has already declined by 0.1 pH units relative to the pre-industrial level (Orr et al., 2005), and is projected to decrease 0.3 to 0.46 units by the end of this century, depending on CO2 emission scenarios (Caldeira and Wickett, 2005). The overall goal of this research is to parameterize how changes in pCO2 levels could alter the biological and alkalinity pumps of the world ocean. Specifically, the direct and indirect effects of ocean acidification will be examined within a simple, controlled predator/prey system containing a single prey phytoplankton species (the coccolithophore, Emiliania huxleyi) and a single predator (the oceanic metazoan grazer, Calanus finmarchicus). The experiments are designed to elucidate both direct effects (i.e. effects of ocean acidification on the individual organisms only) and interactive effects (i.e. effects on the combined predator/prey system). Interactive experiments with phytoplankton prey and zooplankton predator are a critical starting point for predicting the overall impact of ocean acidification in marine ecosystems. To meet these goals, a state-of-the-art facility will be constructed with growth chambers that are calibrated and have highly-controlled pH and alkalinity levels. The strength of this approach lies in meticulous calibration and redundant measurements that will be made to ensure that conditions within the chambers are well described and tightly monitored for DIC levels. Growth and calcification rates in coccolithophores and the developmental rates, morphological and behavioral effects on copepods will be measured. The PIC and POC in the algae and the excreted fecal pellets will be monitored for changes in the PIC/POC ratio, a key parameter for modeling feedback mechanisms for rising pCO2 levels. In addition, 14C experiments are planned to measure calcification rates in coccolithophores and dissolution rates as a result of grazing. These key experiments will verify closure in the mass balance of PIC, allowing the determination of actual dissolution rates of PIC within the guts of copepod grazers. |
attribute | NC_GLOBAL | projects_0_end_date | String | 2015-07 |
attribute | NC_GLOBAL | projects_0_geolocation | String | Laboratory experiments; East Boothbay, Maine |
attribute | NC_GLOBAL | projects_0_name | String | Effects of ocean acidification on Emiliania huxleyi and Calanus finmarchicus; insights into the oceanic alkalinity and biological carbon pumps |
attribute | NC_GLOBAL | projects_0_project_nid | String | 514415 |
attribute | NC_GLOBAL | projects_0_start_date | String | 2012-08 |
attribute | NC_GLOBAL | publisher_name | String | Biological and Chemical Oceanographic Data Management Office (BCO-DMO) |
attribute | NC_GLOBAL | publisher_type | String | institution |
attribute | NC_GLOBAL | sourceUrl | String | (local files) |
attribute | NC_GLOBAL | standard_name_vocabulary | String | CF Standard Name Table v55 |
attribute | NC_GLOBAL | summary | String | Pleurochrysis carterae diel culture dynamics analyzed at Bigelow Laboratory from 2013 (OA Copes Coccoliths project) |
attribute | NC_GLOBAL | time_coverage_end | String | 2013-07-18T10:23:00Z |
attribute | NC_GLOBAL | time_coverage_start | String | 2013-07-17T09:05:00Z |
attribute | NC_GLOBAL | title | String | [Pleurochrysis carterae 24 hour culture dynamics] - Pleurochrysis carterae diel culture dynamics analyzed at Bigelow Laboratory from 2013 (OA Copes Coccoliths project) (Effects of ocean acidification on Emiliania huxleyi and Calanus finmarchicus; insights into the oceanic alkalinity and biological carbon pumps) |
attribute | NC_GLOBAL | version | String | 1 |
attribute | NC_GLOBAL | xml_source | String | osprey2erddap.update_xml() v1.3 |
variable | pCO2_treatment | short | ||
attribute | pCO2_treatment | _FillValue | short | 32767 |
attribute | pCO2_treatment | actual_range | short | 280, 750 |
attribute | pCO2_treatment | bcodmo_name | String | treatment |
attribute | pCO2_treatment | description | String | The independent variable; one of three pCO2 levels (280 ppm, 380 ppm, or 750 ppm). These treatment levels are nominal values as they represent the target pCO2 for each treatment. Within each pCO2 treatment there are 14 days worth of culture measurements for the algal cultures. Measurements of the media (without algae) were made on days 0 and 14. Only chemical measurements were made on the media not biological measurements. |
attribute | pCO2_treatment | long_name | String | P CO2 Treatment |
attribute | pCO2_treatment | units | String | parts per million (ppm) |
variable | approx_time | String | ||
attribute | approx_time | bcodmo_name | String | time |
attribute | approx_time | description | String | The approximate time of the given measurement; HH:MM |
attribute | approx_time | long_name | String | Approx Time |
attribute | approx_time | nerc_identifier | String | https://vocab.nerc.ac.uk/collection/P01/current/AHMSAA01/ |
attribute | approx_time | units | String | unitless |
variable | elapsed_time | byte | ||
attribute | elapsed_time | _FillValue | byte | 127 |
attribute | elapsed_time | actual_range | byte | 0, 25 |
attribute | elapsed_time | bcodmo_name | String | time_elapsed |
attribute | elapsed_time | description | String | The time elapsed since the beginning of the 24 h monitoring. |
attribute | elapsed_time | long_name | String | Elapsed Time |
attribute | elapsed_time | nerc_identifier | String | https://vocab.nerc.ac.uk/collection/P01/current/ELTMZZZZ/ |
attribute | elapsed_time | units | String | hours |
variable | date | String | ||
attribute | date | bcodmo_name | String | date |
attribute | date | description | String | The date the measurement was taken; YYYY/mm/dd |
attribute | date | long_name | String | Date |
attribute | date | nerc_identifier | String | https://vocab.nerc.ac.uk/collection/P01/current/ADATAA01/ |
attribute | date | time_precision | String | 1970-01-01 |
attribute | date | units | String | unitless |
variable | time2 | String | ||
attribute | time2 | bcodmo_name | String | time |
attribute | time2 | description | String | The actual time that the measurements for that timepoint began; HH:MM |
attribute | time2 | long_name | String | Time |
attribute | time2 | nerc_identifier | String | https://vocab.nerc.ac.uk/collection/P01/current/AHMSAA01/ |
attribute | time2 | units | String | unitless |
variable | light | String | ||
attribute | light | bcodmo_name | String | unknown |
attribute | light | description | String | Indicates whether the lights in the incubator were turned on or off. When the lights were on the intensity was 470 umol photons/m-2/s PAR. When the lights were off the intensity was 0 umol photons/m-2/s PAR and the investigators used a red light when in the incubator to take samples. |
attribute | light | long_name | String | Light |
attribute | light | units | String | unitless |
variable | pH | float | ||
attribute | pH | _FillValue | float | NaN |
attribute | pH | actual_range | float | 7.683, 8.424 |
attribute | pH | bcodmo_name | String | pH |
attribute | pH | colorBarMaximum | double | 9.0 |
attribute | pH | colorBarMinimum | double | 7.0 |
attribute | pH | description | String | pH measured on the total scale. |
attribute | pH | long_name | String | Sea Water Ph Reported On Total Scale |
attribute | pH | nerc_identifier | String | https://vocab.nerc.ac.uk/collection/P01/current/PHXXZZXX/ |
attribute | pH | units | String | pH |
variable | temperature | float | ||
attribute | temperature | _FillValue | float | NaN |
attribute | temperature | actual_range | float | 15.9, 17.0 |
attribute | temperature | bcodmo_name | String | temperature |
attribute | temperature | description | String | Temperature |
attribute | temperature | long_name | String | Temperature |
attribute | temperature | units | String | celsius |
variable | salinity | float | ||
attribute | salinity | _FillValue | float | NaN |
attribute | salinity | actual_range | float | 32.1, 32.6 |
attribute | salinity | bcodmo_name | String | sal |
attribute | salinity | colorBarMaximum | double | 37.0 |
attribute | salinity | colorBarMinimum | double | 32.0 |
attribute | salinity | description | String | Salinity |
attribute | salinity | long_name | String | Sea Water Practical Salinity |
attribute | salinity | nerc_identifier | String | https://vocab.nerc.ac.uk/collection/P01/current/PSALST01/ |
attribute | salinity | units | String | practical salinity units (PSU) |
variable | inVivo_fluorescence | float | ||
attribute | inVivo_fluorescence | _FillValue | float | NaN |
attribute | inVivo_fluorescence | actual_range | float | 2.76, 7.21 |
attribute | inVivo_fluorescence | bcodmo_name | String | fluorescence |
attribute | inVivo_fluorescence | description | String | fluorescence to indicate relative chlorophyll-a concentration. |
attribute | inVivo_fluorescence | long_name | String | In Vivo Fluorescence |
attribute | inVivo_fluorescence | nerc_identifier | String | https://vocab.nerc.ac.uk/collection/P01/current/CPHLPM01/ |
attribute | inVivo_fluorescence | units | String | relative fluorescence units |
variable | cell_density | int | ||
attribute | cell_density | _FillValue | int | 2147483647 |
attribute | cell_density | actual_range | int | 31000, 88600 |
attribute | cell_density | bcodmo_name | String | cell_concentration |
attribute | cell_density | description | String | cell density of the culture as measured by the Moxi Z Automated Cell Counter. |
attribute | cell_density | long_name | String | Cell Density |
attribute | cell_density | units | String | cells/mL |
variable | mean_cellDiameter | float | ||
attribute | mean_cellDiameter | _FillValue | float | NaN |
attribute | mean_cellDiameter | actual_range | float | 8.871, 11.045 |
attribute | mean_cellDiameter | bcodmo_name | String | unknown |
attribute | mean_cellDiameter | description | String | mean cell diameter as measured by the Moxi Z Automated Cell Counter. |
attribute | mean_cellDiameter | long_name | String | Mean Cell Diameter |
attribute | mean_cellDiameter | units | String | microns (um) |
variable | fluorescencePerCellDensity | float | ||
attribute | fluorescencePerCellDensity | _FillValue | float | NaN |
attribute | fluorescencePerCellDensity | actual_range | float | 7.0E-5, 1.2E-4 |
attribute | fluorescencePerCellDensity | bcodmo_name | String | fluorescence |
attribute | fluorescencePerCellDensity | description | String | Fluorescence divided by cell density to give an estimate of fluorescence per cell. |
attribute | fluorescencePerCellDensity | long_name | String | Fluorescence Per Cell Density |
attribute | fluorescencePerCellDensity | nerc_identifier | String | https://vocab.nerc.ac.uk/collection/P01/current/CPHLPM01/ |
attribute | fluorescencePerCellDensity | units | String | fluorescence/cell/mL |
variable | PIC_ugCPerL | float | ||
attribute | PIC_ugCPerL | _FillValue | float | NaN |
attribute | PIC_ugCPerL | actual_range | float | 373.42, 860.91 |
attribute | PIC_ugCPerL | bcodmo_name | String | PIC |
attribute | PIC_ugCPerL | description | String | Particulate inorganic carbon concentration |
attribute | PIC_ugCPerL | long_name | String | PIC Ug CPer L |
attribute | PIC_ugCPerL | units | String | ugC/L |
variable | PIC_pgCPerCell | float | ||
attribute | PIC_pgCPerCell | _FillValue | float | NaN |
attribute | PIC_pgCPerCell | actual_range | float | 6.49, 21.54 |
attribute | PIC_pgCPerCell | bcodmo_name | String | PIC |
attribute | PIC_pgCPerCell | description | String | Particulate inorganic carbon concentration with unit conversion to pg/mL-1 and divided by the cell density to give pg C per cell. |
attribute | PIC_pgCPerCell | long_name | String | PIC Pg CPer Cell |
attribute | PIC_pgCPerCell | units | String | pgC/cell |
variable | NO3_NO2 | float | ||
attribute | NO3_NO2 | _FillValue | float | NaN |
attribute | NO3_NO2 | actual_range | float | 576.55, 879.48 |
attribute | NO3_NO2 | bcodmo_name | String | NO3_NO2 |
attribute | NO3_NO2 | colorBarMaximum | double | 50.0 |
attribute | NO3_NO2 | colorBarMinimum | double | 0.0 |
attribute | NO3_NO2 | description | String | Nitrate + Nitrite concentration measured at the University of California Santa Barbara. |
attribute | NO3_NO2 | long_name | String | Mole Concentration Of Nitrate In Sea Water |
attribute | NO3_NO2 | units | String | umol/kg |
variable | NO3_UCSB | float | ||
attribute | NO3_UCSB | _FillValue | float | NaN |
attribute | NO3_UCSB | actual_range | float | 614.87, 867.84 |
attribute | NO3_UCSB | bcodmo_name | String | NO3 |
attribute | NO3_UCSB | colorBarMaximum | double | 50.0 |
attribute | NO3_UCSB | colorBarMinimum | double | 0.0 |
attribute | NO3_UCSB | description | String | Nitrate concentration, measured at the University of California Santa Barbara |
attribute | NO3_UCSB | long_name | String | Mole Concentration Of Nitrate In Sea Water |
attribute | NO3_UCSB | nerc_identifier | String | https://vocab.nerc.ac.uk/collection/P01/current/NTRAIGGS/ |
attribute | NO3_UCSB | units | String | umol/kg |
variable | NO3_Bigelow | float | ||
attribute | NO3_Bigelow | _FillValue | float | NaN |
attribute | NO3_Bigelow | actual_range | float | 633.38, 866.12 |
attribute | NO3_Bigelow | bcodmo_name | String | NO3 |
attribute | NO3_Bigelow | colorBarMaximum | double | 50.0 |
attribute | NO3_Bigelow | colorBarMinimum | double | 0.0 |
attribute | NO3_Bigelow | description | String | Nitrate concentration, measured by Bigelow Analytical Services |
attribute | NO3_Bigelow | long_name | String | Mole Concentration Of Nitrate In Sea Water |
attribute | NO3_Bigelow | nerc_identifier | String | https://vocab.nerc.ac.uk/collection/P01/current/NTRAIGGS/ |
attribute | NO3_Bigelow | units | String | umol/kg |
variable | PO4_UCSB | float | ||
attribute | PO4_UCSB | _FillValue | float | NaN |
attribute | PO4_UCSB | actual_range | float | 17.1, 32.47 |
attribute | PO4_UCSB | bcodmo_name | String | PO4 |
attribute | PO4_UCSB | description | String | Phosphate concentration measured at the University of California Santa Barbara |
attribute | PO4_UCSB | long_name | String | Mass Concentration Of Phosphate In Sea Water |
attribute | PO4_UCSB | units | String | umol/kg |
variable | PO4_Bigelow | float | ||
attribute | PO4_Bigelow | _FillValue | float | NaN |
attribute | PO4_Bigelow | actual_range | float | 21.57, 32.73 |
attribute | PO4_Bigelow | bcodmo_name | String | PO4 |
attribute | PO4_Bigelow | description | String | Phosphate concentration measured by Bigelow Analytical Services |
attribute | PO4_Bigelow | long_name | String | Mass Concentration Of Phosphate In Sea Water |
attribute | PO4_Bigelow | units | String | umol/kg |
variable | SiO4 | float | ||
attribute | SiO4 | _FillValue | float | NaN |
attribute | SiO4 | actual_range | float | 10.93, 24.0 |
attribute | SiO4 | bcodmo_name | String | SiO4 |
attribute | SiO4 | description | String | Silicate concentration measured at the University of California Santa Barbara |
attribute | SiO4 | long_name | String | Si O4 |
attribute | SiO4 | nerc_identifier | String | https://vocab.nerc.ac.uk/collection/P01/current/SLCAAAZX/ |
attribute | SiO4 | units | String | umol/kg |
variable | mean_SiO4 | float | ||
attribute | mean_SiO4 | _FillValue | float | NaN |
attribute | mean_SiO4 | actual_range | float | 12.33, 21.59 |
attribute | mean_SiO4 | bcodmo_name | String | SiO4 |
attribute | mean_SiO4 | description | String | Silicate concentration estimated as the average of the values from the first and last timepoint. Biologically there should be no change in silicate concentration because coccolithophores do not take up silicate. However silicate values are needed to calculate the carbonate chemistry parameters in CO2sys so the average was used for timepoints when carbonate chemistry values were calculated. |
attribute | mean_SiO4 | long_name | String | Mean Si O4 |
attribute | mean_SiO4 | nerc_identifier | String | https://vocab.nerc.ac.uk/collection/P01/current/SLCAAAZX/ |
attribute | mean_SiO4 | units | String | umol/kg |
variable | TA | float | ||
attribute | TA | _FillValue | float | NaN |
attribute | TA | actual_range | float | 2050.8, 2174.9 |
attribute | TA | bcodmo_name | String | TALK |
attribute | TA | description | String | Total alkalinity |
attribute | TA | long_name | String | TA |
attribute | TA | nerc_identifier | String | https://vocab.nerc.ac.uk/collection/P01/current/MDMAP014/ |
attribute | TA | units | String | ueq/kg |
variable | DIC | float | ||
attribute | DIC | _FillValue | float | NaN |
attribute | DIC | actual_range | float | 1751.9, 2006.8 |
attribute | DIC | bcodmo_name | String | DIC |
attribute | DIC | description | String | Dissolved inorganic carbon concentration calculated using CO2sys |
attribute | DIC | long_name | String | DIC |
attribute | DIC | units | String | umol/kg |
variable | pCO2 | float | ||
attribute | pCO2 | _FillValue | float | NaN |
attribute | pCO2 | actual_range | float | 201.9, 928.1 |
attribute | pCO2 | bcodmo_name | String | pCO2 |
attribute | pCO2 | description | String | Partial pressure of carbon dioxide in the water calculated using CO2sys. This calculated value more accurately represents the pCO2 of the culture than the nominal treatment value, which represents the pCO2 of the air bubbled into the culture. |
attribute | pCO2 | long_name | String | P CO2 |
attribute | pCO2 | nerc_identifier | String | https://vocab.nerc.ac.uk/collection/P01/current/PCO2C101/ |
attribute | pCO2 | units | String | uatm |
variable | HCO3 | float | ||
attribute | HCO3 | _FillValue | float | NaN |
attribute | HCO3 | actual_range | float | 1555.6, 1895.9 |
attribute | HCO3 | bcodmo_name | String | bicarbonate |
attribute | HCO3 | description | String | Bicarbonate concentration calculated using CO2sys |
attribute | HCO3 | long_name | String | HCO3 |
attribute | HCO3 | units | String | umol/kg |
variable | CO3 | float | ||
attribute | CO3 | _FillValue | float | NaN |
attribute | CO3 | actual_range | float | 68.2, 215.5 |
attribute | CO3 | bcodmo_name | String | carbonate |
attribute | CO3 | description | String | Carbonate concentration calculated using CO2sys |
attribute | CO3 | long_name | String | CO3 |
attribute | CO3 | units | String | umol/kg |
variable | CO2 | float | ||
attribute | CO2 | _FillValue | float | NaN |
attribute | CO2 | actual_range | float | 7.3, 33.6 |
attribute | CO2 | bcodmo_name | String | pCO2 |
attribute | CO2 | description | String | Carbon dioxide concentration calculated using CO2sys |
attribute | CO2 | long_name | String | CO2 |
attribute | CO2 | nerc_identifier | String | https://vocab.nerc.ac.uk/collection/P01/current/PCO2C101/ |
attribute | CO2 | units | String | umol/kg |
variable | omega_calcite | float | ||
attribute | omega_calcite | _FillValue | float | NaN |
attribute | omega_calcite | actual_range | float | 1.66, 5.24 |
attribute | omega_calcite | bcodmo_name | String | Calcite Saturation State |
attribute | omega_calcite | description | String | Saturation state of calcium carbonate with respect to calcite calculated using CO2sys |
attribute | omega_calcite | long_name | String | Omega Calcite |
attribute | omega_calcite | units | String | unitless |
variable | time | double | ||
attribute | time | _CoordinateAxisType | String | Time |
attribute | time | actual_range | double | 1.3740519E9, 1.37414298E9 |
attribute | time | axis | String | T |
attribute | time | bcodmo_name | String | ISO_DateTime_UTC |
attribute | time | description | String | Date/Time (UTC) ISO formatted; YYYY/mm/dd;HH:MM:SS |
attribute | time | ioos_category | String | Time |
attribute | time | long_name | String | ISO Date Time UTC |
attribute | time | nerc_identifier | String | https://vocab.nerc.ac.uk/collection/P01/current/DTUT8601/ |
attribute | time | source_name | String | ISO_DateTime_UTC |
attribute | time | standard_name | String | time |
attribute | time | time_origin | String | 01-JAN-1970 00:00:00 |
attribute | time | time_precision | String | 1970-01-01T00:00:00Z |
attribute | time | units | String | seconds since 1970-01-01T00:00:00Z |
The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.