BCO-DMO ERDDAP
Accessing BCO-DMO data
log in    
Brought to you by BCO-DMO    

ERDDAP > info > bcodmo_dataset_682074

Grid
DAP
Data
Sub-
set
Table
DAP
Data
Make
A
Graph
W
M
S
Source
Data
Files
Acces-
sible
?
Title Sum-
mary
ISO,
Metadata
Back-
ground
Info
RSS E
mail
Institution Dataset ID
     data   graph     files  public Zooplankton densities collected from a seasonally hypoxic fjord on R/V Clifford A Barnes
cruises from 2012-2013 (Pelagic Hypoxia project)
   ?     I   M   background (external link) RSS Subscribe BCO-DMO bcodmo_dataset_682074

The Dataset's Variables and Attributes

Row Type Variable Name Attribute Name Data Type Value
attribute NC_GLOBAL access_formats String .htmlTable,.csv,.json,.mat,.nc,.tsv,.esriCsv,.geoJson,.odvTxt
attribute NC_GLOBAL acquisition_description String We conducted day/night paired zooplankton sampling in Hood Canal in June-
October, 2012 and 2013. Sampling stations included Dabob, Union, Hoodsport,
Duckabush, and Twanoh. A Hydrobios MultiNet (five-net capacity) was used to
collect depth-stratified and full water column samples. Net mouth area was
0.25 m2; 200- and 335-um mesh nets were used to sample different size
zooplankton. Nets were towed obliquely at 1-2.5 knots (slower tows for smaller
mesh size), with inner and outer flow meters to measure water volume sampled.
For the depth-stratified sampling, depth layers were based on the dissolved
oxygen profiles from CTD casts.

In the laboratory, zooplankton were quantitatively subsampled and
microscopically counted. All individuals were identified to species or larger
taxonomic grouping, and by life stages for some species, within each sample.
attribute NC_GLOBAL awards_0_award_nid String 557503
attribute NC_GLOBAL awards_0_award_number String OCE-1154648
attribute NC_GLOBAL awards_0_data_url String http://www.nsf.gov/awardsearch/showAward.do?AwardNumber=1154648 (external link)
attribute NC_GLOBAL awards_0_funder_name String NSF Division of Ocean Sciences
attribute NC_GLOBAL awards_0_funding_acronym String NSF OCE
attribute NC_GLOBAL awards_0_funding_source_nid String 355
attribute NC_GLOBAL awards_0_program_manager String David L. Garrison
attribute NC_GLOBAL awards_0_program_manager_nid String 50534
attribute NC_GLOBAL cdm_data_type String Other
attribute NC_GLOBAL comment String Zooplankton Densities
J. Keister et al.
Version 8 February 2017
attribute NC_GLOBAL Conventions String COARDS, CF-1.6, ACDD-1.3
attribute NC_GLOBAL creator_email String info at bco-dmo.org
attribute NC_GLOBAL creator_name String BCO-DMO
attribute NC_GLOBAL creator_type String institution
attribute NC_GLOBAL creator_url String https://www.bco-dmo.org/ (external link)
attribute NC_GLOBAL data_source String extract_data_as_tsv version 2.3 19 Dec 2019
attribute NC_GLOBAL date_created String 2017-02-11T00:19:13Z
attribute NC_GLOBAL date_modified String 2019-04-04T16:46:00Z
attribute NC_GLOBAL defaultDataQuery String &time<now
attribute NC_GLOBAL doi String 10.1575/1912/bco-dmo.682074.1
attribute NC_GLOBAL Easternmost_Easting double -122.807
attribute NC_GLOBAL geospatial_lat_max double 47.812
attribute NC_GLOBAL geospatial_lat_min double 47.371
attribute NC_GLOBAL geospatial_lat_units String degrees_north
attribute NC_GLOBAL geospatial_lon_max double -122.807
attribute NC_GLOBAL geospatial_lon_min double -123.125
attribute NC_GLOBAL geospatial_lon_units String degrees_east
attribute NC_GLOBAL infoUrl String https://www.bco-dmo.org/dataset/682074 (external link)
attribute NC_GLOBAL institution String BCO-DMO
attribute NC_GLOBAL instruments_0_acronym String SBE-43 DO
attribute NC_GLOBAL instruments_0_dataset_instrument_nid String 682096
attribute NC_GLOBAL instruments_0_description String The Sea-Bird SBE 43 dissolved oxygen sensor is a redesign of the Clark polarographic membrane type of dissolved oxygen sensors. more information from Sea-Bird Electronics
attribute NC_GLOBAL instruments_0_instrument_external_identifier String https://vocab.nerc.ac.uk/collection/L22/current/TOOL0036/ (external link)
attribute NC_GLOBAL instruments_0_instrument_name String Sea-Bird SBE 43 Dissolved Oxygen Sensor
attribute NC_GLOBAL instruments_0_instrument_nid String 552
attribute NC_GLOBAL instruments_0_supplied_name String SBE 43
attribute NC_GLOBAL instruments_1_acronym String MultiNet
attribute NC_GLOBAL instruments_1_dataset_instrument_description String Used to collect water column samples
attribute NC_GLOBAL instruments_1_dataset_instrument_nid String 682100
attribute NC_GLOBAL instruments_1_description String The MultiNet© Multiple Plankton Sampler is designed as a sampling system for horizontal and vertical collections in successive water layers. Equipped with 5 or 9 net bags, the MultiNet© can be delivered in 3 sizes (apertures) : Mini (0.125 m2), Midi (0.25 m2) and Maxi (0.5 m2). The system consists of a shipboard Deck Command Unit and a stainless steel frame to which 5 (or 9) net bags are attached by means of zippers to canvas. The net bags are opened and closed by means of an arrangement of levers that are triggered by a battery powered Motor Unit. The commands for actuation of the net bags are given via single or multi-conductor cable between the Underwater Unit and the Deck Command Unit. Although horizontal collections typically use a mesh size of 300 microns, mesh sizes from 100 to 500 may also be used. Vertical collections are also common. The shipboard Deck Command Unit displays all relevant system data, including the actual operating depth of the net system.
attribute NC_GLOBAL instruments_1_instrument_external_identifier String https://vocab.nerc.ac.uk/collection/L22/current/NETT0099/ (external link)
attribute NC_GLOBAL instruments_1_instrument_name String MultiNet
attribute NC_GLOBAL instruments_1_instrument_nid String 559
attribute NC_GLOBAL instruments_1_supplied_name String Hydrobios MultiNet (five-net capacity)
attribute NC_GLOBAL keywords String bco, bco-dmo, biological, chemical, code, data, dataset, date, day, day_night, density, depth, depth_max, depth_min, dmo, erddap, fwc, FWC_DS, history, iso, ISO_DateTime_UTC, latitude, life, life_history_stage, longitude, management, mesh, mesh_size, night, oceanography, office, preliminary, sample, sample_code, size, species, stage, start, station, time, time_start
attribute NC_GLOBAL license String https://www.bco-dmo.org/dataset/682074/license (external link)
attribute NC_GLOBAL metadata_source String https://www.bco-dmo.org/api/dataset/682074 (external link)
attribute NC_GLOBAL Northernmost_Northing double 47.812
attribute NC_GLOBAL param_mapping String {'682074': {'lat': 'master - latitude', 'lon': 'master - longitude', 'ISO_DateTime_UTC': 'flag - time'}}
attribute NC_GLOBAL parameter_source String https://www.bco-dmo.org/mapserver/dataset/682074/parameters (external link)
attribute NC_GLOBAL people_0_affiliation String University of Washington
attribute NC_GLOBAL people_0_affiliation_acronym String UW
attribute NC_GLOBAL people_0_person_name String Dr Julie E. Keister
attribute NC_GLOBAL people_0_person_nid String 51330
attribute NC_GLOBAL people_0_role String Principal Investigator
attribute NC_GLOBAL people_0_role_type String originator
attribute NC_GLOBAL people_1_affiliation String University of Washington
attribute NC_GLOBAL people_1_affiliation_acronym String UW
attribute NC_GLOBAL people_1_person_name String Dr Timothy Essington
attribute NC_GLOBAL people_1_person_nid String 557506
attribute NC_GLOBAL people_1_role String Co-Principal Investigator
attribute NC_GLOBAL people_1_role_type String originator
attribute NC_GLOBAL people_2_affiliation String University of Washington
attribute NC_GLOBAL people_2_affiliation_acronym String UW
attribute NC_GLOBAL people_2_person_name String Dr John K. Horne
attribute NC_GLOBAL people_2_person_nid String 557509
attribute NC_GLOBAL people_2_role String Co-Principal Investigator
attribute NC_GLOBAL people_2_role_type String originator
attribute NC_GLOBAL people_3_affiliation String Northwest Fisheries Science Center - Seattle
attribute NC_GLOBAL people_3_affiliation_acronym String NOAA NWFSC
attribute NC_GLOBAL people_3_person_name String Dr Sandra Parker-Stetter
attribute NC_GLOBAL people_3_person_nid String 557511
attribute NC_GLOBAL people_3_role String Co-Principal Investigator
attribute NC_GLOBAL people_3_role_type String originator
attribute NC_GLOBAL people_4_affiliation String University of Washington
attribute NC_GLOBAL people_4_affiliation_acronym String UW
attribute NC_GLOBAL people_4_person_name String Dr Julie E. Keister
attribute NC_GLOBAL people_4_person_nid String 51330
attribute NC_GLOBAL people_4_role String Contact
attribute NC_GLOBAL people_4_role_type String related
attribute NC_GLOBAL people_5_affiliation String Woods Hole Oceanographic Institution
attribute NC_GLOBAL people_5_affiliation_acronym String WHOI BCO-DMO
attribute NC_GLOBAL people_5_person_name String Hannah Ake
attribute NC_GLOBAL people_5_person_nid String 650173
attribute NC_GLOBAL people_5_role String BCO-DMO Data Manager
attribute NC_GLOBAL people_5_role_type String related
attribute NC_GLOBAL project String PelagicHypoxia
attribute NC_GLOBAL projects_0_acronym String PelagicHypoxia
attribute NC_GLOBAL projects_0_description String Description from NSF award abstract:
Low dissolved oxygen (hypoxia) is one of the most pronounced, pervasive, and significant disturbances in marine ecosystems. Yet, our understanding of the ecological impacts of hypoxia on pelagic food webs is incomplete because of our limited knowledge of how organism responses to hypoxia affect critical ecosystem processes. In pelagic food webs, distribution shifts of mesozooplankton and their predators may affect predator-prey overlap and dictate energy flow up food webs. Similarly, hypoxia may induce shifts in zooplankton community composition towards species that impede energy flow to planktivorous fish. However, compensatory responses by species and communities might negate these effects, maintaining trophic coupling and sustaining productivity of upper trophic level species. The PIs propose to answer the question "Does hypoxia affect energy flow from mesozooplankton to pelagic fish?" They approach this question with a nested framework of hypotheses that considers two sets of processes alternatively responsible for either changes or maintenance of pelagic ecosystem energy flows. They will conduct their study in the Hood Canal, WA. Unlike most hypoxia-impacted estuaries, hypoxic regions of Hood Canal are in close proximity to sites that are not affected. This makes it logistically easier to conduct a comparative study and reduces the number of potential confounding factors when comparing areas that are far apart.
Improved understanding of how hypoxia impacts marine ecosystems will benefit the practical application of ecosystem-based management (EBM) in coastal and estuarine ecosystems. Effective application of EBM requires that the impacts of human activities are well understood and that ecological effects can be tracked using indicators. This project will contribute to both of these needs. The PIs will share their findings on local and national levels with Federal, State, Tribal, and County biologists. To increase exposure of science to underrepresented groups, the PIs also will provide Native American youth with opportunities to participate in field collections and laboratory processing through summer internships. The PIs will collaborate with the NSF-funded Pacific Northwest Louis Stokes Alliance for Minority Participation and tribes from the Hood Canal region to recruit and mentor students for potential careers in marine science. This project will support several undergraduate researchers, two Ph.D. students, a post-doc, and two early-career scientists.
attribute NC_GLOBAL projects_0_end_date String 2016-05
attribute NC_GLOBAL projects_0_geolocation String Puget Sound, WA (47 N, 123 W)
attribute NC_GLOBAL projects_0_name String Consequences of hypoxia on food web linkages in a pelagic marine ecosystem
attribute NC_GLOBAL projects_0_project_nid String 557504
attribute NC_GLOBAL projects_0_start_date String 2012-06
attribute NC_GLOBAL publisher_name String Biological and Chemical Oceanographic Data Management Office (BCO-DMO)
attribute NC_GLOBAL publisher_type String institution
attribute NC_GLOBAL sourceUrl String (local files)
attribute NC_GLOBAL Southernmost_Northing double 47.371
attribute NC_GLOBAL standard_name_vocabulary String CF Standard Name Table v55
attribute NC_GLOBAL summary String Zooplankton densities collected from a seasonally hypoxic fjord on R/V Clifford A Barnes cruises from 2012-2013 (Pelagic Hypoxia project)
attribute NC_GLOBAL time_coverage_start String 2012-06-11T14:10:00Z
attribute NC_GLOBAL title String Zooplankton densities collected from a seasonally hypoxic fjord on R/V Clifford A Barnes cruises from 2012-2013 (Pelagic Hypoxia project)
attribute NC_GLOBAL version String 1
attribute NC_GLOBAL Westernmost_Easting double -123.125
attribute NC_GLOBAL xml_source String osprey2erddap.update_xml() v1.3
variable station   String  
attribute station bcodmo_name String station
attribute station description String Station code where sampling occurred; DB=Dabob; UN=Union; HP=Hoodsport; DU=Duckabush; TW=Twanoh.
attribute station long_name String Station
attribute station units String unitless
variable latitude   double  
attribute latitude _CoordinateAxisType String Lat
attribute latitude _FillValue double NaN
attribute latitude actual_range double 47.371, 47.812
attribute latitude axis String Y
attribute latitude bcodmo_name String latitude
attribute latitude colorBarMaximum double 90.0
attribute latitude colorBarMinimum double -90.0
attribute latitude description String Latitude; N is positive
attribute latitude ioos_category String Location
attribute latitude long_name String Latitude
attribute latitude nerc_identifier String https://vocab.nerc.ac.uk/collection/P09/current/LATX/ (external link)
attribute latitude standard_name String latitude
attribute latitude units String degrees_north
variable longitude   double  
attribute longitude _CoordinateAxisType String Lon
attribute longitude _FillValue double NaN
attribute longitude actual_range double -123.125, -122.807
attribute longitude axis String X
attribute longitude bcodmo_name String longitude
attribute longitude colorBarMaximum double 180.0
attribute longitude colorBarMinimum double -180.0
attribute longitude description String Longitude; S is positive
attribute longitude ioos_category String Location
attribute longitude long_name String Longitude
attribute longitude nerc_identifier String https://vocab.nerc.ac.uk/collection/P09/current/LONX/ (external link)
attribute longitude standard_name String longitude
attribute longitude units String degrees_east
variable day_night   String  
attribute day_night bcodmo_name String unknown
attribute day_night description String Indication of whether sampling occurred at day or night.
attribute day_night long_name String Day Night
attribute day_night units String unitless
variable species   String  
attribute species bcodmo_name String species
attribute species description String Species sampled
attribute species long_name String Species
attribute species units String unitless
variable date   int  
attribute date _FillValue int 2147483647
attribute date actual_range int 20120611, 20131003
attribute date bcodmo_name String date
attribute date description String Date sample was collected; Local time (PDT); YYYYMMDD
attribute date long_name String Date
attribute date nerc_identifier String https://vocab.nerc.ac.uk/collection/P01/current/ADATAA01/ (external link)
attribute date units String unitless
variable time_start   String  
attribute time_start bcodmo_name String time_start
attribute time_start description String Start time of sampling; HH:MM
attribute time_start long_name String Time Start
attribute time_start units String unitless
variable life_history_stage   String  
attribute life_history_stage bcodmo_name String stage
attribute life_history_stage description String Description of life history stage at which sample was found
attribute life_history_stage long_name String Life History Stage
attribute life_history_stage units String unitless
variable sample_code   String  
attribute sample_code bcodmo_name String sample
attribute sample_code description String PI issued sample ID; sampling date + Station + D (day ) or N (night) + Net code (e.g. m1) _mesh
attribute sample_code long_name String Sample Code
attribute sample_code nerc_identifier String https://vocab.nerc.ac.uk/collection/P02/current/ACYC/ (external link)
attribute sample_code units String unitless
variable mesh_size   short  
attribute mesh_size _FillValue short 32767
attribute mesh_size actual_range short 200, 335
attribute mesh_size bcodmo_name String filter_size
attribute mesh_size description String Size of mesh used in sampling.
attribute mesh_size long_name String Mesh Size
attribute mesh_size units String microns
variable depth_max   float  
attribute depth_max _FillValue float NaN
attribute depth_max actual_range float 5.0, 165.0
attribute depth_max bcodmo_name String depth_max
attribute depth_max colorBarMaximum double 8000.0
attribute depth_max colorBarMinimum double -8000.0
attribute depth_max colorBarPalette String TopographyDepth
attribute depth_max description String Maximum depth sampled.
attribute depth_max long_name String Depth
attribute depth_max standard_name String depth
attribute depth_max units String meters
variable depth_min   float  
attribute depth_min _FillValue float NaN
attribute depth_min actual_range float 0.0, 90.0
attribute depth_min bcodmo_name String depth_min
attribute depth_min colorBarMaximum double 8000.0
attribute depth_min colorBarMinimum double -8000.0
attribute depth_min colorBarPalette String TopographyDepth
attribute depth_min description String Minimum depth sampled.
attribute depth_min long_name String Depth
attribute depth_min standard_name String depth
attribute depth_min units String meters
variable FWC_DS   String  
attribute FWC_DS bcodmo_name String unknown
attribute FWC_DS description String Full whole column (FWC) sampling or depth-stratified (DS) sampling
attribute FWC_DS long_name String FWC DS
attribute FWC_DS units String unitless
variable density   double  
attribute density _FillValue double NaN
attribute density actual_range double 7.9732E-4, 14125.0
attribute density bcodmo_name String density
attribute density description String Density of species sampled
attribute density long_name String Density
attribute density units String count per meter cubed
variable time   double  
attribute time _CoordinateAxisType String Time
attribute time actual_range double 1.3394238E9, NaN
attribute time axis String T
attribute time bcodmo_name String ISO_DateTime_UTC
attribute time description String Date/Time (UTC) ISO formatted
attribute time ioos_category String Time
attribute time long_name String ISO Date Time UTC
attribute time nerc_identifier String https://vocab.nerc.ac.uk/collection/P01/current/DTUT8601/ (external link)
attribute time standard_name String time
attribute time time_origin String 01-JAN-1970 00:00:00
attribute time units String seconds since 1970-01-01T00:00:00Z

The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.


 
ERDDAP, Version 2.02
Disclaimers | Privacy Policy | Contact