Accessing BCO-DMO data
log in    
Brought to you by BCO-DMO    

ERDDAP > info > bcodmo_dataset_709787

Title Sum-
Institution Dataset ID
     data   graph     files  public Cyprinodon variegatus offspring growth rate from 5 generation increasing temperature
experiments conducted on Atlantic wild caught specimens during 2014.
   ?     I   M   background (external link) RSS Subscribe BCO-DMO bcodmo_dataset_709787

The Dataset's Variables and Attributes

Row Type Variable Name Attribute Name Data Type Value
attribute NC_GLOBAL access_formats String .htmlTable,.csv,.json,.mat,.nc,.tsv
attribute NC_GLOBAL acquisition_description String We caught wild juvenile sheepshead minnows (Cyprinodon\u00a0variegatus) from
South Carolina (SC), Maryland (MD) and Connecticut (CT) in mid-August in 2014.
All fish were transferred to acclimation aquaria at 24 deg C at the NOAA
Fisheries Science Center, Santa Cruz, California. These temperatures represent
the range experienced by sheepshead minnows from SC,\u00a0MD\u00a0and CT
during a normal non-breeding season. Daily care followed standard protocols
(Cripe et al. 2009, Salinas and Munch 2012), including ad libitum feeding of
TetraMin flakes (Tetra Holding, Blacksburg, VA, USA). Salinity was maintained
at 20\u00a0ppt,\u00a0but was reduced to 10 ppt for two days prior to egg
collection. The photoperiod was 14L:10D. Each day we changed 10% of the total
volume of water.

For the experiments of thermal transgenerational plasticity, all eggs were
divided in half and transferred to either same temperature with parent or
different temperature with parent: for example, if we collected eggs from 26
deg C parents, then a half of eggs were at 26 deg C and another half of eggs
were at 32 deg C. Upon hatching we randomly selected up to four larvae from
each treatment group. We measured standard body length from photographs of the
fish obtained with a Canon 40D digital camera with Image J (Rasband 2016). At
the end of\u00a0experiment, we measured wet-mass, and\u00a0them\u00a0removed
and weighted the testes and gonad.
attribute NC_GLOBAL awards_0_award_nid String 564428
attribute NC_GLOBAL awards_0_award_number String OCE-1130483
attribute NC_GLOBAL awards_0_data_url String http://www.nsf.gov/awardsearch/showAward.do?AwardNumber=1130483 (external link)
attribute NC_GLOBAL awards_0_funder_name String NSF Division of Ocean Sciences
attribute NC_GLOBAL awards_0_funding_acronym String NSF OCE
attribute NC_GLOBAL awards_0_funding_source_nid String 355
attribute NC_GLOBAL awards_0_program_manager String David L. Garrison
attribute NC_GLOBAL awards_0_program_manager_nid String 50534
attribute NC_GLOBAL cdm_data_type String Other
attribute NC_GLOBAL comment String 5 Generation Temperature Experiment
M. Mangel, S. Munch, & S. Sogard, PIs
Version 25 July 2017
attribute NC_GLOBAL Conventions String COARDS, CF-1.6, ACDD-1.3
attribute NC_GLOBAL creator_email String info at bco-dmo.org
attribute NC_GLOBAL creator_name String BCO-DMO
attribute NC_GLOBAL creator_type String institution
attribute NC_GLOBAL creator_url String https://www.bco-dmo.org/ (external link)
attribute NC_GLOBAL data_source String extract_data_as_tsv version 2.3 19 Dec 2019
attribute NC_GLOBAL date_created String 2017-07-25T20:25:05Z
attribute NC_GLOBAL date_modified String 2020-02-06T20:50:38Z
attribute NC_GLOBAL defaultDataQuery String &time<now
attribute NC_GLOBAL doi String 10.1575/1912/bco-dmo.709787.1
attribute NC_GLOBAL infoUrl String https://www.bco-dmo.org/dataset/709787 (external link)
attribute NC_GLOBAL institution String BCO-DMO
attribute NC_GLOBAL instruments_0_acronym String camera
attribute NC_GLOBAL instruments_0_dataset_instrument_description String Photographs used to determine fish body length
attribute NC_GLOBAL instruments_0_dataset_instrument_nid String 709797
attribute NC_GLOBAL instruments_0_description String All types of photographic equipment including stills, video, film and digital systems.
attribute NC_GLOBAL instruments_0_instrument_external_identifier String https://vocab.nerc.ac.uk/collection/L05/current/311/ (external link)
attribute NC_GLOBAL instruments_0_instrument_name String Camera
attribute NC_GLOBAL instruments_0_instrument_nid String 520
attribute NC_GLOBAL instruments_0_supplied_name String Canon 40D digital camera with Image J
attribute NC_GLOBAL instruments_1_acronym String Salinity Sensor
attribute NC_GLOBAL instruments_1_dataset_instrument_description String Used to maintain salinity in aquaria
attribute NC_GLOBAL instruments_1_dataset_instrument_nid String 709799
attribute NC_GLOBAL instruments_1_description String Category of instrument that simultaneously measures electrical conductivity and temperature in the water column to provide temperature and salinity data.
attribute NC_GLOBAL instruments_1_instrument_external_identifier String https://vocab.nerc.ac.uk/collection/L05/current/350/ (external link)
attribute NC_GLOBAL instruments_1_instrument_name String Salinity Sensor
attribute NC_GLOBAL instruments_1_instrument_nid String 710
attribute NC_GLOBAL instruments_1_supplied_name String Salinity Sensor
attribute NC_GLOBAL instruments_2_acronym String Aquarium
attribute NC_GLOBAL instruments_2_dataset_instrument_description String Used to acclimate juvenile sheepshead minnows
attribute NC_GLOBAL instruments_2_dataset_instrument_nid String 709796
attribute NC_GLOBAL instruments_2_description String Aquarium - a vivarium consisting of at least one transparent side in which water-dwelling plants or animals are kept
attribute NC_GLOBAL instruments_2_instrument_name String Aquarium
attribute NC_GLOBAL instruments_2_instrument_nid String 711
attribute NC_GLOBAL instruments_2_supplied_name String Aquarium
attribute NC_GLOBAL instruments_3_acronym String Scale
attribute NC_GLOBAL instruments_3_dataset_instrument_description String Used to measure wet-mass, testes, and gonads.
attribute NC_GLOBAL instruments_3_dataset_instrument_nid String 709800
attribute NC_GLOBAL instruments_3_description String An instrument used to measure weight or mass.
attribute NC_GLOBAL instruments_3_instrument_external_identifier String https://vocab.nerc.ac.uk/collection/L05/current/LAB13/ (external link)
attribute NC_GLOBAL instruments_3_instrument_name String Scale
attribute NC_GLOBAL instruments_3_instrument_nid String 714
attribute NC_GLOBAL instruments_3_supplied_name String Scale
attribute NC_GLOBAL instruments_4_dataset_instrument_description String Used to measure water temperature and/or body temperature
attribute NC_GLOBAL instruments_4_dataset_instrument_nid String 709798
attribute NC_GLOBAL instruments_4_description String An instrument that measures temperature digitally.
attribute NC_GLOBAL instruments_4_instrument_name String digital thermometer
attribute NC_GLOBAL instruments_4_instrument_nid String 685040
attribute NC_GLOBAL instruments_4_supplied_name String Used to measure temperature
attribute NC_GLOBAL keywords String age, AgeMaturation, bco, bco-dmo, biological, chemical, data, dataset, day, dmo, erddap, F1_Temp, F2_Temp, F3_Temp, F4_Temp, F5_Temp, generation, GR_8WK, management, maturation, oceanography, office, P_Temp, preliminary, sex, T_Day, temperature, wk2
attribute NC_GLOBAL license String https://www.bco-dmo.org/dataset/709787/license (external link)
attribute NC_GLOBAL metadata_source String https://www.bco-dmo.org/api/dataset/709787 (external link)
attribute NC_GLOBAL param_mapping String {'709787': {}}
attribute NC_GLOBAL parameter_source String https://www.bco-dmo.org/mapserver/dataset/709787/parameters (external link)
attribute NC_GLOBAL people_0_affiliation String University of California-Santa Cruz
attribute NC_GLOBAL people_0_affiliation_acronym String UC Santa Cruz
attribute NC_GLOBAL people_0_person_name String Dr Marc Mangel
attribute NC_GLOBAL people_0_person_nid String 564431
attribute NC_GLOBAL people_0_role String Principal Investigator
attribute NC_GLOBAL people_0_role_type String originator
attribute NC_GLOBAL people_1_affiliation String National Oceanic and Atmospheric Administration
attribute NC_GLOBAL people_1_affiliation_acronym String NOAA
attribute NC_GLOBAL people_1_person_name String Dr Stephan Munch
attribute NC_GLOBAL people_1_person_nid String 564434
attribute NC_GLOBAL people_1_role String Co-Principal Investigator
attribute NC_GLOBAL people_1_role_type String originator
attribute NC_GLOBAL people_2_affiliation String National Oceanic and Atmospheric Administration
attribute NC_GLOBAL people_2_affiliation_acronym String NOAA
attribute NC_GLOBAL people_2_person_name String Susan Sogard
attribute NC_GLOBAL people_2_person_nid String 516020
attribute NC_GLOBAL people_2_role String Co-Principal Investigator
attribute NC_GLOBAL people_2_role_type String originator
attribute NC_GLOBAL people_3_affiliation String National Oceanic and Atmospheric Administration
attribute NC_GLOBAL people_3_affiliation_acronym String NOAA
attribute NC_GLOBAL people_3_person_name String Dr Stephan Munch
attribute NC_GLOBAL people_3_person_nid String 564434
attribute NC_GLOBAL people_3_role String Contact
attribute NC_GLOBAL people_3_role_type String related
attribute NC_GLOBAL people_4_affiliation String Woods Hole Oceanographic Institution
attribute NC_GLOBAL people_4_affiliation_acronym String WHOI BCO-DMO
attribute NC_GLOBAL people_4_person_name String Hannah Ake
attribute NC_GLOBAL people_4_person_nid String 650173
attribute NC_GLOBAL people_4_role String BCO-DMO Data Manager
attribute NC_GLOBAL people_4_role_type String related
attribute NC_GLOBAL project String ThermalTGP
attribute NC_GLOBAL projects_0_acronym String ThermalTGP
attribute NC_GLOBAL projects_0_description String Description from NSF award abstract:
Many marine species are currently undergoing significant range shifts and exceedingly rapid changes in phenotype driven, potentially, by warming, ocean acidification, and human-induced evolution. Dramatic shifts in body size and maturation have been observed in many marine fishes worldwide. There is considerable debate over whether these changes are the result of rapid evolution or physiological responses to changes in environmental variables. Attempts to address these issues typically assume that thermal physiology is fixed or slow to evolve. Transgenerational plasticity (TGP) occurs when the environment experienced by the parents directly translates, without any changes in DNA sequences, into significant changes in offspring. TGP in thermal performance provides a mechanism for a rapid response to climate change that has, to date, been demonstrated only in terrestrial plants. This project will provide the first test of thermal TGP in marine systems and will explore its implications for forecasting responses to human-induced evolution and climate change. First, the PIs will test for thermal TGP in four taxonomically distinct fishes. Then, using sheepshead minnows as a model, they will study the dependence of transgenerational responses on the predictability of the thermal environment and test whether disparate thermal environments select for different levels of TGP. With these data they will develop the first stochastic population model including TGP and use it to understand life history evolution and predict responses to climate change.
The existence of thermal TGP poses a serious challenge to the idea that changes in thermal physiology are slow to evolve and can safely be ignored in modeling population responses to climate change or harvest selection. By extension, virtually all field estimates of heritability and physiological measurements will need to be reconsidered in light of thermal TGP, as will conclusions regarding rapid evolution in shifting environments. The research team has made significant contributions to theoretical and empirical work on the evolutionary, behavioral, and physiological ecology of growth in many different species and environments. Together, the team has substantial prior experience in all aspects of the proposed research and has worked together successfully for many years.
attribute NC_GLOBAL projects_0_end_date String 2016-08
attribute NC_GLOBAL projects_0_geolocation String Nearshore waters of Florida, South Carolina, Maryland, & Connecticut
attribute NC_GLOBAL projects_0_name String Beyond maternal effects: Transgenerational plasticity in thermal performance
attribute NC_GLOBAL projects_0_project_nid String 564429
attribute NC_GLOBAL projects_0_start_date String 2011-09
attribute NC_GLOBAL publisher_name String Biological and Chemical Oceanographic Data Management Office (BCO-DMO)
attribute NC_GLOBAL publisher_type String institution
attribute NC_GLOBAL sourceUrl String (local files)
attribute NC_GLOBAL standard_name_vocabulary String CF Standard Name Table v55
attribute NC_GLOBAL summary String Cyprinodon variegatus offspring growth rate from 5 generation increasing temperature experiments conducted on Atlantic wild caught specimens during 2014.
attribute NC_GLOBAL title String Cyprinodon variegatus offspring growth rate from 5 generation increasing temperature experiments conducted on Atlantic wild caught specimens during 2014.
attribute NC_GLOBAL version String 1
attribute NC_GLOBAL xml_source String osprey2erddap.update_xml() v1.3
variable Generation   byte  
attribute Generation _FillValue byte 127
attribute Generation actual_range byte 1, 4
attribute Generation bcodmo_name String unknown
attribute Generation description String Number of generations
attribute Generation long_name String Generation
attribute Generation units String unitless
variable P_Temp   byte  
attribute P_Temp _FillValue byte 127
attribute P_Temp actual_range byte 24, 26
attribute P_Temp bcodmo_name String temperature
attribute P_Temp description String Parent temperature
attribute P_Temp long_name String P Temp
attribute P_Temp units String degree Celsius
variable F1_Temp   byte  
attribute F1_Temp _FillValue byte 127
attribute F1_Temp actual_range byte 24, 26
attribute F1_Temp bcodmo_name String temperature
attribute F1_Temp description String F1 temperature
attribute F1_Temp long_name String F1 Temp
attribute F1_Temp units String degree Celsius
variable F2_Temp   byte  
attribute F2_Temp _FillValue byte 127
attribute F2_Temp actual_range byte 24, 28
attribute F2_Temp bcodmo_name String temperature
attribute F2_Temp description String F2 temperature
attribute F2_Temp long_name String F2 Temp
attribute F2_Temp units String degree Celsius
variable F3_Temp   byte  
attribute F3_Temp _FillValue byte 127
attribute F3_Temp actual_range byte 24, 30
attribute F3_Temp bcodmo_name String temperature
attribute F3_Temp description String F3 temperature
attribute F3_Temp long_name String F3 Temp
attribute F3_Temp units String degree Celsius
variable F4_Temp   byte  
attribute F4_Temp _FillValue byte 127
attribute F4_Temp actual_range byte 26, 32
attribute F4_Temp bcodmo_name String temperature
attribute F4_Temp description String F4 temperature
attribute F4_Temp long_name String F4 Temp
attribute F4_Temp units String degree Celsius
variable F5_Temp   byte  
attribute F5_Temp _FillValue byte 127
attribute F5_Temp actual_range byte 26, 32
attribute F5_Temp bcodmo_name String temperature
attribute F5_Temp description String F5 temperature
attribute F5_Temp long_name String F5 Temp
attribute F5_Temp units String degree Celsius
variable T_Day   byte  
attribute T_Day _FillValue byte 127
attribute T_Day actual_range byte 7, 30
attribute T_Day bcodmo_name String day
attribute T_Day description String Date of parental exposure on new temperature (26 C or 32C)
attribute T_Day long_name String T Day
attribute T_Day nerc_identifier String https://vocab.nerc.ac.uk/collection/P01/current/DAYXXXXX/ (external link)
attribute T_Day units String unitless
variable Sex   byte  
attribute Sex _FillValue byte 127
attribute Sex actual_range byte 1, 2
attribute Sex bcodmo_name String sex
attribute Sex description String Code of Offspring sex; 1 - male; 2 - female
attribute Sex long_name String Sex
attribute Sex units String unitless
variable WK2   float  
attribute WK2 _FillValue float NaN
attribute WK2 actual_range float 0.028, 1.542
attribute WK2 bcodmo_name String fish_len
attribute WK2 description String Standard body length at week 2
attribute WK2 long_name String WK2
attribute WK2 units String centimeters
variable GR_8WK   float  
attribute GR_8WK _FillValue float NaN
attribute GR_8WK actual_range float 0.106, 0.452
attribute GR_8WK bcodmo_name String growth
attribute GR_8WK description String Mean growth rate
attribute GR_8WK long_name String GR 8 WK
attribute GR_8WK units String centimeters per week
variable AgeMaturation   byte  
attribute AgeMaturation _FillValue byte 127
attribute AgeMaturation actual_range byte 9, 10
attribute AgeMaturation bcodmo_name String age
attribute AgeMaturation description String Weeks it took to become mature
attribute AgeMaturation long_name String Age Maturation
attribute AgeMaturation units String count

The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.

ERDDAP, Version 2.02
Disclaimers | Privacy Policy | Contact