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Grid DAP Data | Sub- set | Table DAP Data | Make A Graph | W M S | Source Data Files | Acces- sible | Title | Sum- mary | FGDC, ISO, Metadata | Back- ground Info | RSS | E | Institution | Dataset ID |
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data | graph | files | public | [Acropora cervicornis photosynthesis and respiration rates] - Acropora cervicornis photosynthesis and respiration rates under different pH and temperature treatments from experiments at Summerland Key, Florida in September of 2016 (CAREER: Applying phenotypic variability to identify resilient Acropora cervicornis genotypes in the Florida Keys) | I M | background | BCO-DMO | bcodmo_dataset_712366 |
Row Type | Variable Name | Attribute Name | Data Type | Value |
---|---|---|---|---|
attribute | NC_GLOBAL | access_formats | String | .htmlTable,.csv,.json,.mat,.nc,.tsv |
attribute | NC_GLOBAL | acquisition_description | String | Physiological Methods Photosynthesis, respiration, and calcification measurements were performed on each fragment using 300 mL temperature-controlled respirometry chambers filled with seawater from the treatment aquaria that was continuously stirred with a magnetic stir bar.\u00a0 The chambers were used to assess the rates of respiration (Rd) in the dark and rates of photosynthesis (Pn) and calcification in the light.\u00a0 Light was supplied by a series of blue and red LEDs with adjustable intensity (150 uMol quanta m-2 sec-1).\u00a0\u00a0 |
attribute | NC_GLOBAL | awards_0_award_nid | String | 642851 |
attribute | NC_GLOBAL | awards_0_award_number | String | OCE-1452538 |
attribute | NC_GLOBAL | awards_0_data_url | String | http://www.nsf.gov/awardsearch/showAward?AWD_ID=1452538&HistoricalAwards=false |
attribute | NC_GLOBAL | awards_0_funder_name | String | NSF Division of Ocean Sciences |
attribute | NC_GLOBAL | awards_0_funding_acronym | String | NSF OCE |
attribute | NC_GLOBAL | awards_0_funding_source_nid | String | 355 |
attribute | NC_GLOBAL | awards_0_program_manager | String | Michael E. Sieracki |
attribute | NC_GLOBAL | awards_0_program_manager_nid | String | 50446 |
attribute | NC_GLOBAL | cdm_data_type | String | Other |
attribute | NC_GLOBAL | comment | String | Acropora cervicornis photosynthesis and respiration PI: Erinn Muller data version: 2017-08-08 |
attribute | NC_GLOBAL | Conventions | String | COARDS, CF-1.6, ACDD-1.3 |
attribute | NC_GLOBAL | creator_email | String | info at bco-dmo.org |
attribute | NC_GLOBAL | creator_name | String | BCO-DMO |
attribute | NC_GLOBAL | creator_type | String | institution |
attribute | NC_GLOBAL | creator_url | String | https://www.bco-dmo.org/ |
attribute | NC_GLOBAL | data_source | String | extract_data_as_tsv version 2.3 19 Dec 2019 |
attribute | NC_GLOBAL | date_created | String | 2017-08-08T15:17:37Z |
attribute | NC_GLOBAL | date_modified | String | 2019-10-18T16:32:14Z |
attribute | NC_GLOBAL | defaultDataQuery | String | &time<now |
attribute | NC_GLOBAL | doi | String | 10.1575/1912/bco-dmo.712366.1 |
attribute | NC_GLOBAL | infoUrl | String | https://www.bco-dmo.org/dataset/712366 |
attribute | NC_GLOBAL | institution | String | BCO-DMO |
attribute | NC_GLOBAL | instruments_0_acronym | String | YSI ProPlus |
attribute | NC_GLOBAL | instruments_0_dataset_instrument_description | String | Temperature, salinity, and dissolved oxygen measured with YSI Pro 2030. |
attribute | NC_GLOBAL | instruments_0_dataset_instrument_nid | String | 716204 |
attribute | NC_GLOBAL | instruments_0_description | String | The YSI Professional Plus handheld multiparameter meter provides for the measurement of a variety of combinations for dissolved oxygen, conductivity, specific conductance, salinity, resistivity, total dissolved solids (TDS), pH, ORP, pH/ORP combination, ammonium (ammonia), nitrate, chloride and temperature. More information from the manufacturer. |
attribute | NC_GLOBAL | instruments_0_instrument_name | String | YSI Professional Plus Multi-Parameter Probe |
attribute | NC_GLOBAL | instruments_0_instrument_nid | String | 666 |
attribute | NC_GLOBAL | instruments_0_supplied_name | String | YSI Pro 2030 |
attribute | NC_GLOBAL | instruments_1_acronym | String | pH Sensor |
attribute | NC_GLOBAL | instruments_1_dataset_instrument_nid | String | 716207 |
attribute | NC_GLOBAL | instruments_1_description | String | General term for an instrument that measures the pH or how acidic or basic a solution is. |
attribute | NC_GLOBAL | instruments_1_instrument_name | String | pH Sensor |
attribute | NC_GLOBAL | instruments_1_instrument_nid | String | 674 |
attribute | NC_GLOBAL | instruments_1_supplied_name | String | Mettler Toledo SevenGo Pro |
attribute | NC_GLOBAL | instruments_2_dataset_instrument_nid | String | 712521 |
attribute | NC_GLOBAL | instruments_2_description | String | An optode or optrode is an optical sensor device that optically measures a specific substance usually with the aid of a chemical transducer. |
attribute | NC_GLOBAL | instruments_2_instrument_name | String | Optode |
attribute | NC_GLOBAL | instruments_2_instrument_nid | String | 727 |
attribute | NC_GLOBAL | instruments_2_supplied_name | String | optodes (Oxy-4, Presense, Germany) |
attribute | NC_GLOBAL | keywords | String | area, bco, bco-dmo, biological, chemical, dark, data, dataset, date, dmo, erddap, genotype, light, management, O2, O2_rate_dark, O2_rate_light, oceanography, office, oxygen, preliminary, rate, tank, temperature, time |
attribute | NC_GLOBAL | license | String | https://www.bco-dmo.org/dataset/712366/license |
attribute | NC_GLOBAL | metadata_source | String | https://www.bco-dmo.org/api/dataset/712366 |
attribute | NC_GLOBAL | param_mapping | String | {'712366': {}} |
attribute | NC_GLOBAL | parameter_source | String | https://www.bco-dmo.org/mapserver/dataset/712366/parameters |
attribute | NC_GLOBAL | people_0_affiliation | String | Mote Marine Laboratory |
attribute | NC_GLOBAL | people_0_affiliation_acronym | String | Mote |
attribute | NC_GLOBAL | people_0_person_name | String | Dr Erinn Muller |
attribute | NC_GLOBAL | people_0_person_nid | String | 642853 |
attribute | NC_GLOBAL | people_0_role | String | Principal Investigator |
attribute | NC_GLOBAL | people_0_role_type | String | originator |
attribute | NC_GLOBAL | people_1_affiliation | String | Woods Hole Oceanographic Institution |
attribute | NC_GLOBAL | people_1_affiliation_acronym | String | WHOI BCO-DMO |
attribute | NC_GLOBAL | people_1_person_name | String | Amber York |
attribute | NC_GLOBAL | people_1_person_nid | String | 643627 |
attribute | NC_GLOBAL | people_1_role | String | BCO-DMO Data Manager |
attribute | NC_GLOBAL | people_1_role_type | String | related |
attribute | NC_GLOBAL | project | String | Resilient Acerv |
attribute | NC_GLOBAL | projects_0_acronym | String | Resilient Acerv |
attribute | NC_GLOBAL | projects_0_description | String | ABSTRACT Caribbean staghorn coral was one of the most common corals within reefs of the Florida Keys several decades ago. Over the last 40 years disease, bleaching, overfishing and habitat degradation caused a 95% reduction of the population. Staghorn coral is now listed as threatened under the U.S. Endangered Species Act of 1973. Within the past few years, millions of dollars have been invested for the purpose of restoring the population of staghorn coral within Florida and the U.S. Virgin Islands. Significant effort has been placed on maintaining and propagating corals of known genotypes within coral nurseries for the purpose of outplanting. However, little is known about the individual genotypes that are currently being outplanted from nurseries onto coral reefs. Are the genotypes being used for outplanting resilient enough to survive the three major stressors affecting the population in the Florida Keys: disease, high water temperatures, and ocean acidification? The research within the present study will be the first step in answering this critically important question. The funded project will additionally develop a research-based afterschool program with K-12 students in the Florida Keys and U.S. Virgin Islands that emphasizes an inquiry-based curriculum, STEM research activities, and peer-to-peer mentoring. The information from the present study will help scientists predict the likelihood of species persistence within the lower Florida Keys under future climate-change and ocean-acidification scenarios. Results of this research will also help guide restoration efforts throughout Florida and the Caribbean, and lead to more informative, science-based restoration activities. Acropora cervicornis dominated shallow-water reefs within the Florida Keys for at least the last half a million years, but the population has recently declined due to multiple stressors. Understanding the current population level of resilience to three major threats - disease outbreaks, high water temperatures, and ocean acidification conditions - is critical for the preservation of this threatened species. Results from the present study will answer the primary research question: will representative genotypes from the lower Florida Keys provide enough phenotypic variation for this threatened species to survive in the future? The present proposal will couple controlled laboratory challenge experiments with field data and modeling applications, and collaborate with local educators to fulfill five objectives: 1) identify A. cervicornis genotypes resistant to disease, 2) identify A. cervicornis genotypes resilient to high water temperature and ocean acidification conditions, 3) quantify how high water temperature and ocean acidification conditions impact disease dynamics on A. cervicornis; 4) determine tradeoffs in life-history traits because of resilience factors; and 5) apply a trait-based model, which will predict genotypic structure of a population under different environmental scenarios. |
attribute | NC_GLOBAL | projects_0_end_date | String | 2020-05 |
attribute | NC_GLOBAL | projects_0_geolocation | String | Florida Keys, Summerland Key, FL 24.563595°, -81.278572° |
attribute | NC_GLOBAL | projects_0_name | String | CAREER: Applying phenotypic variability to identify resilient Acropora cervicornis genotypes in the Florida Keys |
attribute | NC_GLOBAL | projects_0_project_nid | String | 642850 |
attribute | NC_GLOBAL | projects_0_start_date | String | 2015-04 |
attribute | NC_GLOBAL | publisher_name | String | Biological and Chemical Oceanographic Data Management Office (BCO-DMO) |
attribute | NC_GLOBAL | publisher_type | String | institution |
attribute | NC_GLOBAL | sourceUrl | String | (local files) |
attribute | NC_GLOBAL | standard_name_vocabulary | String | CF Standard Name Table v55 |
attribute | NC_GLOBAL | summary | String | This dataset contains oxygen change rates under dark and light conditions from 12 Acropora cervicornis genotypes previously exposed to different pH and temperature treatments. The coral surface area during photosynthesis and respiration experiments is included. The experiments were conducted in tanks at Summerland Key, Florida (24.6616,-81.4538) between 2016-09-02 and 2016-09-10 with corals from a nursery located near Looe Key Reef (24.5636, -81.2786). |
attribute | NC_GLOBAL | title | String | [Acropora cervicornis photosynthesis and respiration rates] - Acropora cervicornis photosynthesis and respiration rates under different pH and temperature treatments from experiments at Summerland Key, Florida in September of 2016 (CAREER: Applying phenotypic variability to identify resilient Acropora cervicornis genotypes in the Florida Keys) |
attribute | NC_GLOBAL | version | String | 1 |
attribute | NC_GLOBAL | xml_source | String | osprey2erddap.update_xml() v1.3 |
variable | date | String | ||
attribute | date | bcodmo_name | String | date |
attribute | date | description | String | Day the measurement took place in format yyyy-mm-dd |
attribute | date | long_name | String | Date |
attribute | date | nerc_identifier | String | https://vocab.nerc.ac.uk/collection/P01/current/ADATAA01/ |
attribute | date | source_name | String | date |
attribute | date | time_precision | String | 1970-01-01 |
attribute | date | units | String | unitless |
variable | O2_rate_dark | float | ||
attribute | O2_rate_dark | _FillValue | float | NaN |
attribute | O2_rate_dark | actual_range | float | -24.049, -0.711 |
attribute | O2_rate_dark | bcodmo_name | String | O2_respir |
attribute | O2_rate_dark | description | String | Rate of change (slope) in oxygen levels as coral sat in the dark for 60 minutes |
attribute | O2_rate_dark | long_name | String | O2 Rate Dark |
attribute | O2_rate_dark | units | String | micromoles of oxygen per hour (umol/h) |
variable | O2_rate_light | float | ||
attribute | O2_rate_light | _FillValue | float | NaN |
attribute | O2_rate_light | actual_range | float | -4.486, 10.62 |
attribute | O2_rate_light | bcodmo_name | String | O2_respir |
attribute | O2_rate_light | description | String | Rate of change (slope) in oxygen levels as coral sat in light conditions for 60 minutes |
attribute | O2_rate_light | long_name | String | O2 Rate Light |
attribute | O2_rate_light | units | String | micromoles of oxygen per hour (umol/h) |
variable | genotype | byte | ||
attribute | genotype | _FillValue | byte | 127 |
attribute | genotype | actual_range | byte | 1, 63 |
attribute | genotype | bcodmo_name | String | sample_descrip |
attribute | genotype | description | String | Genotype number of the coral animal for each fragment |
attribute | genotype | long_name | String | Genotype |
attribute | genotype | units | String | unitless |
variable | tank | byte | ||
attribute | tank | _FillValue | byte | 127 |
attribute | tank | actual_range | byte | 1, 20 |
attribute | tank | bcodmo_name | String | tank |
attribute | tank | description | String | Tank number that held the particular coral fragment |
attribute | tank | long_name | String | Tank |
attribute | tank | units | String | unitless |
variable | temp | float | ||
attribute | temp | _FillValue | float | NaN |
attribute | temp | actual_range | float | 27.0, 31.5 |
attribute | temp | bcodmo_name | String | temperature |
attribute | temp | description | String | Treatment temperature level |
attribute | temp | long_name | String | Temperature |
attribute | temp | nerc_identifier | String | https://vocab.nerc.ac.uk/collection/P01/current/TEMPP901/ |
attribute | temp | units | String | Celsius |
variable | pH | String | ||
attribute | pH | bcodmo_name | String | pH |
attribute | pH | description | String | Treatment pH level; ambient = 8.1 pH; hCO2 = 7.7 pH |
attribute | pH | long_name | String | pH |
attribute | pH | nerc_identifier | String | https://vocab.nerc.ac.uk/collection/P01/current/PHXXZZXX/ |
attribute | pH | units | String | unitless |
variable | area | float | ||
attribute | area | _FillValue | float | NaN |
attribute | area | actual_range | float | 4.374, 19.644 |
attribute | area | bcodmo_name | String | surface_area |
attribute | area | description | String | Surface area of the coral |
attribute | area | long_name | String | Area |
attribute | area | units | String | centimeters squared (cm2) |
The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.