ERDDAP > info > bcodmo_dataset_712388

Grid DAP Data	Sub- set	Table DAP Data	Make A Graph	W M S	Source Data Files	Acces- sible	Title	Sum- mary	FGDC, ISO, Metadata	Back- ground Info	RSS	E mail	Institution	Dataset ID
		data	graph		files	public	[Imaging Pulse Amplitude Modulator Fluorometer Data 2016] - Imaging pulse amplitude modulator fluorometer data collected during Acropora cervicornis experiments at Summerland Key, Florida from July to September of 2016 (CAREER: Applying phenotypic variability to identify resilient Acropora cervicornis genotypes in the Florida Keys)		I   M	background			BCO-DMO	bcodmo_dataset_712388

The Dataset's Variables and Attributes

Row Type	Variable Name	Attribute Name	Data Type	Value
attribute	NC_GLOBAL	access_formats	String	.htmlTable,.csv,.json,.mat,.nc,.tsv
attribute	NC_GLOBAL	acquisition_description	String	Corals from different treatment scenarios were IPAMed every other week for the duration of the two-month long experiment. All fragments were subjected to a light curve where the initial pulse represents the max Yield after dark acclimation and the subsequent electron transport rate (ETR) values are recorded after the corals were exposed to increasing light intensities over time.\u00a0
attribute	NC_GLOBAL	awards_0_award_nid	String	642851
attribute	NC_GLOBAL	awards_0_award_number	String	OCE-1452538
attribute	NC_GLOBAL	awards_0_data_url	String	http://www.nsf.gov/awardsearch/showAward?AWD_ID=1452538&HistoricalAwards=false
attribute	NC_GLOBAL	awards_0_funder_name	String	NSF Division of Ocean Sciences
attribute	NC_GLOBAL	awards_0_funding_acronym	String	NSF OCE
attribute	NC_GLOBAL	awards_0_funding_source_nid	String	355
attribute	NC_GLOBAL	awards_0_program_manager	String	Michael E. Sieracki
attribute	NC_GLOBAL	awards_0_program_manager_nid	String	50446
attribute	NC_GLOBAL	cdm_data_type	String	Other
attribute	NC_GLOBAL	comment	String	Imaging Pulse Amplitude Modulator Fluorometer data PI: Erinn Muller data version: 2017-08-08
attribute	NC_GLOBAL	Conventions	String	COARDS, CF-1.6, ACDD-1.3
attribute	NC_GLOBAL	creator_email	String	info at bco-dmo.org
attribute	NC_GLOBAL	creator_name	String	BCO-DMO
attribute	NC_GLOBAL	creator_type	String	institution
attribute	NC_GLOBAL	creator_url	String	https://www.bco-dmo.org/
attribute	NC_GLOBAL	data_source	String	extract_data_as_tsv version 2.3 19 Dec 2019
attribute	NC_GLOBAL	date_created	String	2017-08-08T15:47:44Z
attribute	NC_GLOBAL	date_modified	String	2019-10-18T16:31:56Z
attribute	NC_GLOBAL	defaultDataQuery	String	&time<now
attribute	NC_GLOBAL	doi	String	10.1575/1912/bco-dmo.712388.1
attribute	NC_GLOBAL	infoUrl	String	https://www.bco-dmo.org/dataset/712388
attribute	NC_GLOBAL	institution	String	BCO-DMO
attribute	NC_GLOBAL	instruments_0_acronym	String	Fluorometer
attribute	NC_GLOBAL	instruments_0_dataset_instrument_nid	String	716201
attribute	NC_GLOBAL	instruments_0_description	String	A fluorometer or fluorimeter is a device used to measure parameters of fluorescence: its intensity and wavelength distribution of emission spectrum after excitation by a certain spectrum of light. The instrument is designed to measure the amount of stimulated electromagnetic radiation produced by pulses of electromagnetic radiation emitted into a water sample or in situ.
attribute	NC_GLOBAL	instruments_0_instrument_external_identifier	String	https://vocab.nerc.ac.uk/collection/L05/current/113/
attribute	NC_GLOBAL	instruments_0_instrument_name	String	Fluorometer
attribute	NC_GLOBAL	instruments_0_instrument_nid	String	484
attribute	NC_GLOBAL	instruments_0_supplied_name	String	IPAM MAXI/L Fluorometer with the IMAG-K6 camera
attribute	NC_GLOBAL	keywords	String	alpha, available, bco, bco-dmo, biological, chemical, data, dataset, date, dmo, erddap, etr, genotype, management, mETR, mPAR, mYield, oceanography, office, par, photosynthetically, preliminary, radiation, tank, time, yield
attribute	NC_GLOBAL	license	String	https://www.bco-dmo.org/dataset/712388/license
attribute	NC_GLOBAL	metadata_source	String	https://www.bco-dmo.org/api/dataset/712388
attribute	NC_GLOBAL	param_mapping	String	{'712388': {}}
attribute	NC_GLOBAL	parameter_source	String	https://www.bco-dmo.org/mapserver/dataset/712388/parameters
attribute	NC_GLOBAL	people_0_affiliation	String	Mote Marine Laboratory
attribute	NC_GLOBAL	people_0_affiliation_acronym	String	Mote
attribute	NC_GLOBAL	people_0_person_name	String	Dr Erinn Muller
attribute	NC_GLOBAL	people_0_person_nid	String	642853
attribute	NC_GLOBAL	people_0_role	String	Principal Investigator
attribute	NC_GLOBAL	people_0_role_type	String	originator
attribute	NC_GLOBAL	people_1_affiliation	String	Woods Hole Oceanographic Institution
attribute	NC_GLOBAL	people_1_affiliation_acronym	String	WHOI BCO-DMO
attribute	NC_GLOBAL	people_1_person_name	String	Amber York
attribute	NC_GLOBAL	people_1_person_nid	String	643627
attribute	NC_GLOBAL	people_1_role	String	BCO-DMO Data Manager
attribute	NC_GLOBAL	people_1_role_type	String	related
attribute	NC_GLOBAL	project	String	Resilient Acerv
attribute	NC_GLOBAL	projects_0_acronym	String	Resilient Acerv
attribute	NC_GLOBAL	projects_0_description	String	ABSTRACT Caribbean staghorn coral was one of the most common corals within reefs of the Florida Keys several decades ago. Over the last 40 years disease, bleaching, overfishing and habitat degradation caused a 95% reduction of the population. Staghorn coral is now listed as threatened under the U.S. Endangered Species Act of 1973. Within the past few years, millions of dollars have been invested for the purpose of restoring the population of staghorn coral within Florida and the U.S. Virgin Islands. Significant effort has been placed on maintaining and propagating corals of known genotypes within coral nurseries for the purpose of outplanting. However, little is known about the individual genotypes that are currently being outplanted from nurseries onto coral reefs. Are the genotypes being used for outplanting resilient enough to survive the three major stressors affecting the population in the Florida Keys: disease, high water temperatures, and ocean acidification? The research within the present study will be the first step in answering this critically important question. The funded project will additionally develop a research-based afterschool program with K-12 students in the Florida Keys and U.S. Virgin Islands that emphasizes an inquiry-based curriculum, STEM research activities, and peer-to-peer mentoring. The information from the present study will help scientists predict the likelihood of species persistence within the lower Florida Keys under future climate-change and ocean-acidification scenarios. Results of this research will also help guide restoration efforts throughout Florida and the Caribbean, and lead to more informative, science-based restoration activities. Acropora cervicornis dominated shallow-water reefs within the Florida Keys for at least the last half a million years, but the population has recently declined due to multiple stressors. Understanding the current population level of resilience to three major threats - disease outbreaks, high water temperatures, and ocean acidification conditions - is critical for the preservation of this threatened species. Results from the present study will answer the primary research question: will representative genotypes from the lower Florida Keys provide enough phenotypic variation for this threatened species to survive in the future? The present proposal will couple controlled laboratory challenge experiments with field data and modeling applications, and collaborate with local educators to fulfill five objectives: 1) identify A. cervicornis genotypes resistant to disease, 2) identify A. cervicornis genotypes resilient to high water temperature and ocean acidification conditions, 3) quantify how high water temperature and ocean acidification conditions impact disease dynamics on A. cervicornis; 4) determine tradeoffs in life-history traits because of resilience factors; and 5) apply a trait-based model, which will predict genotypic structure of a population under different environmental scenarios.
attribute	NC_GLOBAL	projects_0_end_date	String	2020-05
attribute	NC_GLOBAL	projects_0_geolocation	String	Florida Keys, Summerland Key, FL 24.563595°, -81.278572°
attribute	NC_GLOBAL	projects_0_name	String	CAREER: Applying phenotypic variability to identify resilient Acropora cervicornis genotypes in the Florida Keys
attribute	NC_GLOBAL	projects_0_project_nid	String	642850
attribute	NC_GLOBAL	projects_0_start_date	String	2015-04
attribute	NC_GLOBAL	publisher_name	String	Biological and Chemical Oceanographic Data Management Office (BCO-DMO)
attribute	NC_GLOBAL	publisher_type	String	institution
attribute	NC_GLOBAL	sourceUrl	String	(local files)
attribute	NC_GLOBAL	standard_name_vocabulary	String	CF Standard Name Table v55
attribute	NC_GLOBAL	summary	String	This dataset contains Imaging Pulse Amplitude Modulator (IPAM) Fluorometer data collected during various Acropora cervicornis treatment experiments. The data include photosynthetic maximum yield (mY), maximum electron transport rate (mETR), the irradiance at which maximum ETR is reached (mPAR), and the initial slope of the ETR curve (alpha). The experiments were conducted in tanks at Summerland Key, Florida (24.6616,-81.4538) between 2016-07-12 and 2016-09-09 with corals from a nursery located near Looe Key Reef (24.5636, -81.2786).
attribute	NC_GLOBAL	title	String	[Imaging Pulse Amplitude Modulator Fluorometer Data 2016] - Imaging pulse amplitude modulator fluorometer data collected during Acropora cervicornis experiments at Summerland Key, Florida from July to September of 2016 (CAREER: Applying phenotypic variability to identify resilient Acropora cervicornis genotypes in the Florida Keys)
attribute	NC_GLOBAL	version	String	1
attribute	NC_GLOBAL	xml_source	String	osprey2erddap.update_xml() v1.3
variable	Date		String
attribute	Date	bcodmo_name	String	date
attribute	Date	description	String	Day the measurement took place in format yyyy-mm-dd
attribute	Date	long_name	String	Date
attribute	Date	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P01/current/ADATAA01/
attribute	Date	source_name	String	Date
attribute	Date	time_precision	String	1970-01-01
attribute	Date	units	String	unitless
variable	Genotype		byte
attribute	Genotype	_FillValue	byte	127
attribute	Genotype	actual_range	byte	1, 67
attribute	Genotype	bcodmo_name	String	sample_descrip
attribute	Genotype	description	String	Genotype number of the coral animal for each fragment
attribute	Genotype	long_name	String	Genotype
attribute	Genotype	units	String	unitless
variable	Tank		byte
attribute	Tank	_FillValue	byte	127
attribute	Tank	actual_range	byte	1, 20
attribute	Tank	bcodmo_name	String	tank
attribute	Tank	description	String	Tank number that held the particular coral fragment
attribute	Tank	long_name	String	Tank
attribute	Tank	units	String	unitless
variable	mYield		float
attribute	mYield	_FillValue	float	NaN
attribute	mYield	actual_range	float	0.409, 0.714
attribute	mYield	bcodmo_name	String	photosynthesis
attribute	mYield	description	String	Photosynthetic yield after dark acclimation
attribute	mYield	long_name	String	M Yield
attribute	mYield	units	String	unitless but represents the proportion of electrons being used for photosynthesis; potential values range from 0 - 1
variable	mETR		float
attribute	mETR	_FillValue	float	NaN
attribute	mETR	actual_range	float	3.4, 32.7
attribute	mETR	bcodmo_name	String	unknown
attribute	mETR	description	String	Maximum level of electron transport rate
attribute	mETR	long_name	String	M ETR
attribute	mETR	units	String	micromoles of electrons per meter per second (umol electrons/m/s)
variable	mPAR		short
attribute	mPAR	_FillValue	short	32767
attribute	mPAR	actual_range	short	55, 530
attribute	mPAR	bcodmo_name	String	PAR
attribute	mPAR	description	String	Level of photosynthetically active radiation (PAR) at maximum electron transfer rate (ETR)
attribute	mPAR	long_name	String	M PAR
attribute	mPAR	units	String	micromoles of photons per meter per second (umol photons/m/s)
variable	alpha		float
attribute	alpha	_FillValue	float	NaN
attribute	alpha	actual_range	float	0.037, 0.164
attribute	alpha	bcodmo_name	String	alpha
attribute	alpha	description	String	Slope of the electron transport rate (ETR); units represent the change in ETR over increasing values of PAR
attribute	alpha	long_name	String	Alpha
attribute	alpha	units	String	micromoles of electrons per meter per second (umol electrons/m/s)

The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.