ERDDAP > info > bcodmo_dataset_712453

Grid DAP Data	Sub- set	Table DAP Data	Make A Graph	W M S	Source Data Files	Acces- sible	Title	Sum- mary	FGDC, ISO, Metadata	Back- ground Info	RSS	E mail	Institution	Dataset ID
		data	graph		files	public	[Sea surface microlayer trace element concentrations] - Sea surface microlayer trace element concentrations from Florida Keys National Marine Sanctuary from 2014-2015 (Vibrio-dust deposition project) (Vibrio as a model microbe for opportunistic heterotrophic response to Saharan dust deposition events in marine waters)		F   I   M	background			BCO-DMO	bcodmo_dataset_712453

The Dataset's Variables and Attributes

Row Type	Variable Name	Attribute Name	Data Type	Value
attribute	NC_GLOBAL	access_formats	String	.htmlTable,.csv,.json,.mat,.nc,.tsv,.esriCsv,.geoJson
attribute	NC_GLOBAL	acquisition_description	String	Microlayer was sampled by a hollow quartz tube dipped vertically into the water column, then slowly pulled vertically out of the water and held over a funnel attached to a receiving bottle for the microlayer sample to drip off. This process was repeated until the desired volume of sample was collected. Corresponding water column samples were collected about 30 cm from the surface where a closed bottle was submerged underwater, opened, then closed again underwater to prevent mixing with the microlayer. Microlayer and water column samples were filtered within 1 hour after collection using 47 mm 0.2 um pore sized polycarbonate track-etched membrane filters by vacuum filtration. Dissolved trace elements were analyzed by a cation exchange column method described in Milne et al. (2010). Reactive particulate trace elements were leached from the filters using a weak acid (acetic acid) and reducing agent (hydroxylamine hydrochloride) solution described in Berger et al. (2008). Refractory particulate trace elements were digested using a microwave digestion technique described in Ebling and Landing (2015). All samples were analyzed on the Thermo Scientific Element 2 HR-ICP-MS.
attribute	NC_GLOBAL	awards_0_award_nid	String	553932
attribute	NC_GLOBAL	awards_0_award_number	String	OCE-1357423
attribute	NC_GLOBAL	awards_0_data_url	String	http://www.nsf.gov/awardsearch/showAward.do?AwardNumber=1357423
attribute	NC_GLOBAL	awards_0_funder_name	String	NSF Division of Ocean Sciences
attribute	NC_GLOBAL	awards_0_funding_acronym	String	NSF OCE
attribute	NC_GLOBAL	awards_0_funding_source_nid	String	355
attribute	NC_GLOBAL	awards_0_program_manager	String	Michael E. Sieracki
attribute	NC_GLOBAL	awards_0_program_manager_nid	String	50446
attribute	NC_GLOBAL	cdm_data_type	String	Other
attribute	NC_GLOBAL	comment	String	Sea Surface Microlayer: Trace Elements Collaborative Proposal: Vibrio as a model microbe for opportunistic heterotrophic response to Saharan dust deposition events in marine waters PI's: E. Lipp (UGA), W. Landing (FSU) E. Ottesen (UGA), M. Wetz (TAMU) Version 2017-08-2 sml=sea surface microlayer; uwc=0.3 m depth water column BDL = below detection limit sample_type: dissolved = passed through 0.2 µm pore sized filter; reactive_particulate = labile particulate matter retained on 0.2 µm pore sized filter; refractory_particulate = refractory particulate matter retained on 0.2 µm pore sized filter
attribute	NC_GLOBAL	Conventions	String	COARDS, CF-1.6, ACDD-1.3
attribute	NC_GLOBAL	creator_email	String	info at bco-dmo.org
attribute	NC_GLOBAL	creator_name	String	BCO-DMO
attribute	NC_GLOBAL	creator_type	String	institution
attribute	NC_GLOBAL	creator_url	String	https://www.bco-dmo.org/
attribute	NC_GLOBAL	data_source	String	extract_data_as_tsv version 2.3 19 Dec 2019
attribute	NC_GLOBAL	dataset_current_state	String	Final and no updates
attribute	NC_GLOBAL	date_created	String	2017-08-08T19:24:20Z
attribute	NC_GLOBAL	date_modified	String	2020-06-03T14:53:03Z
attribute	NC_GLOBAL	defaultDataQuery	String	&time<now
attribute	NC_GLOBAL	doi	String	10.26008/1912/bco-dmo.712453.1
attribute	NC_GLOBAL	Easternmost_Easting	double	-80.814262
attribute	NC_GLOBAL	geospatial_lat_max	double	24.825832
attribute	NC_GLOBAL	geospatial_lat_min	double	24.550933
attribute	NC_GLOBAL	geospatial_lat_units	String	degrees_north
attribute	NC_GLOBAL	geospatial_lon_max	double	-80.814262
attribute	NC_GLOBAL	geospatial_lon_min	double	-81.454334
attribute	NC_GLOBAL	geospatial_lon_units	String	degrees_east
attribute	NC_GLOBAL	infoUrl	String	https://www.bco-dmo.org/dataset/712453
attribute	NC_GLOBAL	institution	String	BCO-DMO
attribute	NC_GLOBAL	instruments_0_acronym	String	ICP Mass Spec
attribute	NC_GLOBAL	instruments_0_dataset_instrument_description	String	All samples were analyzed on the Thermo Scientific Element 2 HR-ICP-MS.
attribute	NC_GLOBAL	instruments_0_dataset_instrument_nid	String	712662
attribute	NC_GLOBAL	instruments_0_description	String	An ICP Mass Spec is an instrument that passes nebulized samples into an inductively-coupled gas plasma (8-10000 K) where they are atomized and ionized. Ions of specific mass-to-charge ratios are quantified in a quadrupole mass spectrometer.
attribute	NC_GLOBAL	instruments_0_instrument_external_identifier	String	https://vocab.nerc.ac.uk/collection/L05/current/LAB15/
attribute	NC_GLOBAL	instruments_0_instrument_name	String	Inductively Coupled Plasma Mass Spectrometer
attribute	NC_GLOBAL	instruments_0_instrument_nid	String	530
attribute	NC_GLOBAL	instruments_0_supplied_name	String	Thermo Scientific Element 2 HR-ICP-MS
attribute	NC_GLOBAL	keywords	String	bco, bco-dmo, biological, chemical, data, dataset, date, dmo, erddap, latitude, longitude, management, oceanography, office, preliminary, replicate, sample, sample_id, sample_type, sml, sml_uwc, time, type, uwc, v, year
attribute	NC_GLOBAL	license	String	https://www.bco-dmo.org/dataset/712453/license
attribute	NC_GLOBAL	metadata_source	String	https://www.bco-dmo.org/api/dataset/712453
attribute	NC_GLOBAL	Northernmost_Northing	double	24.825832
attribute	NC_GLOBAL	param_mapping	String	{'712453': {'latitude': 'flag - latitude', 'longitude': 'flag - longitude'}}
attribute	NC_GLOBAL	parameter_source	String	https://www.bco-dmo.org/mapserver/dataset/712453/parameters
attribute	NC_GLOBAL	people_0_affiliation	String	University of Georgia
attribute	NC_GLOBAL	people_0_affiliation_acronym	String	UGA
attribute	NC_GLOBAL	people_0_person_name	String	Erin K. Lipp
attribute	NC_GLOBAL	people_0_person_nid	String	553935
attribute	NC_GLOBAL	people_0_role	String	Principal Investigator
attribute	NC_GLOBAL	people_0_role_type	String	originator
attribute	NC_GLOBAL	people_1_affiliation	String	Florida State University
attribute	NC_GLOBAL	people_1_affiliation_acronym	String	FSU - EOAS
attribute	NC_GLOBAL	people_1_person_name	String	William M. Landing
attribute	NC_GLOBAL	people_1_person_nid	String	51302
attribute	NC_GLOBAL	people_1_role	String	Co-Principal Investigator
attribute	NC_GLOBAL	people_1_role_type	String	originator
attribute	NC_GLOBAL	people_2_affiliation	String	University of Georgia
attribute	NC_GLOBAL	people_2_affiliation_acronym	String	UGA
attribute	NC_GLOBAL	people_2_person_name	String	Elizabeth Ottesen
attribute	NC_GLOBAL	people_2_person_nid	String	553937
attribute	NC_GLOBAL	people_2_role	String	Co-Principal Investigator
attribute	NC_GLOBAL	people_2_role_type	String	originator
attribute	NC_GLOBAL	people_3_affiliation	String	Texas A&M University
attribute	NC_GLOBAL	people_3_affiliation_acronym	String	TAMU
attribute	NC_GLOBAL	people_3_person_name	String	Michael Wetz
attribute	NC_GLOBAL	people_3_person_nid	String	553945
attribute	NC_GLOBAL	people_3_role	String	Co-Principal Investigator
attribute	NC_GLOBAL	people_3_role_type	String	originator
attribute	NC_GLOBAL	people_4_affiliation	String	Florida State University
attribute	NC_GLOBAL	people_4_affiliation_acronym	String	FSU - EOAS
attribute	NC_GLOBAL	people_4_person_name	String	William M. Landing
attribute	NC_GLOBAL	people_4_person_nid	String	51302
attribute	NC_GLOBAL	people_4_role	String	Contact
attribute	NC_GLOBAL	people_4_role_type	String	related
attribute	NC_GLOBAL	people_5_affiliation	String	Woods Hole Oceanographic Institution
attribute	NC_GLOBAL	people_5_affiliation_acronym	String	WHOI BCO-DMO
attribute	NC_GLOBAL	people_5_person_name	String	Mathew Biddle
attribute	NC_GLOBAL	people_5_person_nid	String	708682
attribute	NC_GLOBAL	people_5_role	String	BCO-DMO Data Manager
attribute	NC_GLOBAL	people_5_role_type	String	related
attribute	NC_GLOBAL	project	String	Vibrio-dust deposition
attribute	NC_GLOBAL	projects_0_acronym	String	Vibrio-dust deposition
attribute	NC_GLOBAL	projects_0_description	String	Description from NSF award abstract: Dust and mineral aerosols are a significant source of micro and macronutrients to oligotrophic ocean surface waters. Evidence is growing that heterotrophic microbes may play key roles in processing deposited minerals and nutrients. Yet it is not known which components of dust stimulate the heterotrophic bacteria, which cellular mechanisms are responsible for the utilization of those components and how the activity of these bacteria affect the availability and utilization of dust-derived minerals and nutrients by marine autotrophs. Knowledge of these factors is key to understanding how dust deposition impacts carbon cycles and for predicting the response of tropical oceans to future changes in the frequency and intensity of dust deposition events. The objective of this project is to examine the specific effects of aeolian dust on heterotrophic microbes in a tropical marine system under controlled conditions. The central hypothesis is that in oligotrophic tropical systems numerically minor opportunistic bacteria are the first responders to influx of dust constituents and respond primarily by rapidly accessing soluble trace metals and limiting nutrients that are deposited with Saharan dust. The project will focus on two specific aims: 1) Quantify changes in community structure, composition and transcriptional activity among marine microbial populations upon exposure to dust, and 2) Identify key components in Saharan dust aerosols that stimulate or repress growth and/or activity in Vibrio, a model opportunistic marine heterotrophic group. The study will use a series of controlled experiments designed to identify and quantify heterotrophic microbial response to dust deposition events using both natural communities and model bacteria (Vibrio) through metagenomics, transcriptomics and atmospheric and marine biogeochemical techniques. This innovative approach will identify the most critical (reactive) components leached from dust aerosols on the microbial community as well as elucidate potential mechanisms of response. There is great interest in the biological response to dust aerosols given its potentially large influence on biogeochemical cycling, but there has been relatively little work that has addressed the mechanisms of response (especially among the heterotrophic microbial fraction) or identified the relative importance of specific constituents of dust aerosols. A detailed framework for microbial response (focusing on opportunistic heterotrophs) will facilitate efforts to link autotrophic and heterotrophic processing. This contribution is significant because it will provide one of the first end-to-end (chemistry to physiology to ecology) mechanistic pathways for marine biological response to desert dust aerosols.
attribute	NC_GLOBAL	projects_0_end_date	String	2017-03
attribute	NC_GLOBAL	projects_0_geolocation	String	Florida Keys, FL, USA
attribute	NC_GLOBAL	projects_0_name	String	Vibrio as a model microbe for opportunistic heterotrophic response to Saharan dust deposition events in marine waters
attribute	NC_GLOBAL	projects_0_project_nid	String	553933
attribute	NC_GLOBAL	projects_0_start_date	String	2014-04
attribute	NC_GLOBAL	publisher_name	String	Biological and Chemical Oceanographic Data Management Office (BCO-DMO)
attribute	NC_GLOBAL	publisher_type	String	institution
attribute	NC_GLOBAL	sourceUrl	String	(local files)
attribute	NC_GLOBAL	Southernmost_Northing	double	24.550933
attribute	NC_GLOBAL	standard_name_vocabulary	String	CF Standard Name Table v55
attribute	NC_GLOBAL	summary	String	This dataset contains trace element concentrations from 2014 and 2015 in the sea surface microlayer and underlying water column for in-situ sampling in the from Florida Keys National Marine Sanctuary.
attribute	NC_GLOBAL	title	String	[Sea surface microlayer trace element concentrations] - Sea surface microlayer trace element concentrations from Florida Keys National Marine Sanctuary from 2014-2015 (Vibrio-dust deposition project) (Vibrio as a model microbe for opportunistic heterotrophic response to Saharan dust deposition events in marine waters)
attribute	NC_GLOBAL	version	String	1
attribute	NC_GLOBAL	Westernmost_Easting	double	-81.454334
attribute	NC_GLOBAL	xml_source	String	osprey2erddap.update_xml() v1.5
variable	year		short
attribute	year	_FillValue	short	32767
attribute	year	actual_range	short	2014, 2015
attribute	year	bcodmo_name	String	year
attribute	year	description	String	four digit year when the data were collected
attribute	year	long_name	String	Year
attribute	year	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P01/current/YEARXXXX/
attribute	year	units	String	unitless
variable	sample_id		String
attribute	sample_id	bcodmo_name	String	sample
attribute	sample_id	description	String	identifier for the sample
attribute	sample_id	long_name	String	Sample Id
attribute	sample_id	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P02/current/ACYC/
attribute	sample_id	units	String	unitless
variable	sml_uwc		String
attribute	sml_uwc	bcodmo_name	String	unknown
attribute	sml_uwc	description	String	specific depth identifier (sml=surface microlayer; uwc=0.3m depth water column)
attribute	sml_uwc	long_name	String	Sml Uwc
attribute	sml_uwc	units	String	unitless
variable	sample_type		String
attribute	sample_type	bcodmo_name	String	sample_type
attribute	sample_type	description	String	type of sample collected (dissolved; reactive_particulate; refractory_particulate)
attribute	sample_type	long_name	String	Sample Type
attribute	sample_type	units	String	unitless
variable	replicate		String
attribute	replicate	bcodmo_name	String	replicate
attribute	replicate	description	String	identifier which specifies which replicate the sample is
attribute	replicate	long_name	String	Replicate
attribute	replicate	units	String	unitless
variable	date_time_UTC		String
attribute	date_time_UTC	bcodmo_name	String	date
attribute	date_time_UTC	description	String	date sample was collected in YYYY-MM-DDTHH:MM:SS.SS format
attribute	date_time_UTC	long_name	String	Date Time UTC
attribute	date_time_UTC	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P01/current/ADATAA01/
attribute	date_time_UTC	source_name	String	date_time_UTC
attribute	date_time_UTC	time_precision	String	1970-01-01T00:00:00Z
attribute	date_time_UTC	units	String	unitless
variable	latitude		double
attribute	latitude	_CoordinateAxisType	String	Lat
attribute	latitude	_FillValue	double	NaN
attribute	latitude	actual_range	double	24.550933, 24.825832
attribute	latitude	axis	String	Y
attribute	latitude	bcodmo_name	String	latitude
attribute	latitude	colorBarMaximum	double	90.0
attribute	latitude	colorBarMinimum	double	-90.0
attribute	latitude	description	String	latitude coordinate of observations; positive values are north
attribute	latitude	ioos_category	String	Location
attribute	latitude	long_name	String	Latitude
attribute	latitude	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P09/current/LATX/
attribute	latitude	standard_name	String	latitude
attribute	latitude	units	String	degrees_north
variable	longitude		double
attribute	longitude	_CoordinateAxisType	String	Lon
attribute	longitude	_FillValue	double	NaN
attribute	longitude	actual_range	double	-81.454334, -80.814262
attribute	longitude	axis	String	X
attribute	longitude	bcodmo_name	String	longitude
attribute	longitude	colorBarMaximum	double	180.0
attribute	longitude	colorBarMinimum	double	-180.0
attribute	longitude	description	String	longitude coordinate of observations; negative values are east
attribute	longitude	ioos_category	String	Location
attribute	longitude	long_name	String	Longitude
attribute	longitude	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P09/current/LONX/
attribute	longitude	standard_name	String	longitude
attribute	longitude	units	String	degrees_east
variable	Al		float
attribute	Al	_FillValue	float	NaN
attribute	Al	actual_range	float	0.049, 46.33
attribute	Al	bcodmo_name	String	trace_metal_conc
attribute	Al	description	String	concentration of aluminum
attribute	Al	long_name	String	Al
attribute	Al	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P03/current/C035/
attribute	Al	units	String	micrograms per liter (ug/L)
variable	Ti		String
attribute	Ti	bcodmo_name	String	trace_metal_conc
attribute	Ti	description	String	concentration of titanium
attribute	Ti	long_name	String	Ti
attribute	Ti	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P03/current/C035/
attribute	Ti	units	String	micrograms per liter (ug/L)
variable	V		String
attribute	V	bcodmo_name	String	trace_metal_conc
attribute	V	description	String	concentration of vanadium
attribute	V	long_name	String	V
attribute	V	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P03/current/C035/
attribute	V	units	String	micrograms per liter (ug/L)
variable	Mn		String
attribute	Mn	bcodmo_name	String	trace_metal_conc
attribute	Mn	description	String	concentration of manganese
attribute	Mn	long_name	String	MN
attribute	Mn	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P03/current/C035/
attribute	Mn	units	String	micrograms per liter (ug/L)
variable	Fe		float
attribute	Fe	_FillValue	float	NaN
attribute	Fe	actual_range	float	0.045, 18.92
attribute	Fe	bcodmo_name	String	trace_metal_conc
attribute	Fe	description	String	concentration of iron
attribute	Fe	long_name	String	Fe
attribute	Fe	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P03/current/C035/
attribute	Fe	units	String	micrograms per liter (ug/L)
variable	Ni		String
attribute	Ni	bcodmo_name	String	trace_metal_conc
attribute	Ni	description	String	concentration of nickel
attribute	Ni	long_name	String	Ni
attribute	Ni	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P03/current/C035/
attribute	Ni	units	String	micrograms per liter (ug/L)
variable	Cu		float
attribute	Cu	_FillValue	float	NaN
attribute	Cu	actual_range	float	0.002, 0.178
attribute	Cu	bcodmo_name	String	trace_metal_conc
attribute	Cu	description	String	concentration of copper
attribute	Cu	long_name	String	Cu
attribute	Cu	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P03/current/C035/
attribute	Cu	units	String	micrograms per liter (ug/L)
variable	Zn		String
attribute	Zn	bcodmo_name	String	trace_metal_conc
attribute	Zn	description	String	concentration of zinc
attribute	Zn	long_name	String	ZN
attribute	Zn	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P03/current/C035/
attribute	Zn	units	String	micrograms per liter (ug/L)
variable	Pb		String
attribute	Pb	bcodmo_name	String	trace_metal_conc
attribute	Pb	description	String	concentration of lead
attribute	Pb	long_name	String	PB
attribute	Pb	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P03/current/C035/
attribute	Pb	units	String	micrograms per liter (ug/L)

The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.