ERDDAP > info > bcodmo_dataset_738212

Grid DAP Data	Sub- set	Table DAP Data	Make A Graph	W M S	Source Data Files	Acces- sible	Title	Sum- mary	FGDC, ISO, Metadata	Back- ground Info	RSS	E mail	Institution	Dataset ID
		data	graph		files	public	[Symbiodinium genotype responses to temperature] - Traits of three Symbiodinium genotypes measured at ambient and elevated temperatures (RUI: Collaborative Research: Genetic variation as a driver of host and symbiont response to increased temperature on coral reefs)		I   M	background			BCO-DMO	bcodmo_dataset_738212

The Dataset's Variables and Attributes

Row Type	Variable Name	Attribute Name	Data Type	Value
attribute	NC_GLOBAL	access_formats	String	.htmlTable,.csv,.json,.mat,.nc,.tsv
attribute	NC_GLOBAL	acquisition_description	String	Replicates of each Symbiodinium genotype were grown in ambient (26 degrees) and elevated (30 degrees) temperatures, after which were measured physiological parameters, including the number of cells, quantum yield, variable fluorescence, and chlorophyll content.
attribute	NC_GLOBAL	awards_0_award_nid	String	632537
attribute	NC_GLOBAL	awards_0_award_number	String	OCE-1559105
attribute	NC_GLOBAL	awards_0_data_url	String	https://www.nsf.gov/awardsearch/showAward?AWD_ID=1559105
attribute	NC_GLOBAL	awards_0_funder_name	String	NSF Division of Ocean Sciences
attribute	NC_GLOBAL	awards_0_funding_acronym	String	NSF OCE
attribute	NC_GLOBAL	awards_0_funding_source_nid	String	355
attribute	NC_GLOBAL	awards_0_program_manager	String	David L. Garrison
attribute	NC_GLOBAL	awards_0_program_manager_nid	String	50534
attribute	NC_GLOBAL	cdm_data_type	String	Other
attribute	NC_GLOBAL	comment	String	Genotype Responses to Temperature Traits of three genotypes measured at ambient and elevated temperatures PI: C. terHorst (CSU-Northridge), M.A. Coffroth (SUNY-Buffalo) version: 2018-05-23
attribute	NC_GLOBAL	Conventions	String	COARDS, CF-1.6, ACDD-1.3
attribute	NC_GLOBAL	creator_email	String	info at bco-dmo.org
attribute	NC_GLOBAL	creator_name	String	BCO-DMO
attribute	NC_GLOBAL	creator_type	String	institution
attribute	NC_GLOBAL	creator_url	String	https://www.bco-dmo.org/
attribute	NC_GLOBAL	data_source	String	extract_data_as_tsv version 2.3 19 Dec 2019
attribute	NC_GLOBAL	date_created	String	2018-06-06T20:27:39Z
attribute	NC_GLOBAL	date_modified	String	2019-10-02T20:59:43Z
attribute	NC_GLOBAL	defaultDataQuery	String	&time<now
attribute	NC_GLOBAL	doi	String	10.1575/1912/bco-dmo.738212.1
attribute	NC_GLOBAL	infoUrl	String	https://www.bco-dmo.org/dataset/738212
attribute	NC_GLOBAL	institution	String	BCO-DMO
attribute	NC_GLOBAL	instruments_0_acronym	String	Fluorometer
attribute	NC_GLOBAL	instruments_0_dataset_instrument_nid	String	738246
attribute	NC_GLOBAL	instruments_0_description	String	A fluorometer or fluorimeter is a device used to measure parameters of fluorescence: its intensity and wavelength distribution of emission spectrum after excitation by a certain spectrum of light. The instrument is designed to measure the amount of stimulated electromagnetic radiation produced by pulses of electromagnetic radiation emitted into a water sample or in situ.
attribute	NC_GLOBAL	instruments_0_instrument_external_identifier	String	https://vocab.nerc.ac.uk/collection/L05/current/113/
attribute	NC_GLOBAL	instruments_0_instrument_name	String	Fluorometer
attribute	NC_GLOBAL	instruments_0_instrument_nid	String	484
attribute	NC_GLOBAL	instruments_0_supplied_name	String	Trilogy Laboratory Fluorometer
attribute	NC_GLOBAL	keywords	String	bco, bco-dmo, biological, cells, chemical, chemistry, Chla, chlapercell, chlorophyll, chlorophyll-a, concentration, concentration_of_chlorophyll_in_sea_water, data, dataset, dmo, earth, Earth Science > Oceans > Ocean Chemistry > Chlorophyll, erddap, genotype, management, number, NumberCells, ocean, oceanography, oceans, office, preliminary, replicate, science, sea, seawater, Temp, temperature, vfl, water
attribute	NC_GLOBAL	keywords_vocabulary	String	GCMD Science Keywords
attribute	NC_GLOBAL	license	String	https://www.bco-dmo.org/dataset/738212/license
attribute	NC_GLOBAL	metadata_source	String	https://www.bco-dmo.org/api/dataset/738212
attribute	NC_GLOBAL	param_mapping	String	{'738212': {}}
attribute	NC_GLOBAL	parameter_source	String	https://www.bco-dmo.org/mapserver/dataset/738212/parameters
attribute	NC_GLOBAL	people_0_affiliation	String	California State University Northridge
attribute	NC_GLOBAL	people_0_affiliation_acronym	String	CSU-Northridge
attribute	NC_GLOBAL	people_0_person_name	String	Casey terHorst
attribute	NC_GLOBAL	people_0_person_nid	String	632541
attribute	NC_GLOBAL	people_0_role	String	Principal Investigator
attribute	NC_GLOBAL	people_0_role_type	String	originator
attribute	NC_GLOBAL	people_1_affiliation	String	State University of New York at Buffalo
attribute	NC_GLOBAL	people_1_affiliation_acronym	String	SUNY Buffalo
attribute	NC_GLOBAL	people_1_person_name	String	Mary Alice Coffroth
attribute	NC_GLOBAL	people_1_person_nid	String	472488
attribute	NC_GLOBAL	people_1_role	String	Co-Principal Investigator
attribute	NC_GLOBAL	people_1_role_type	String	originator
attribute	NC_GLOBAL	people_2_affiliation	String	Woods Hole Oceanographic Institution
attribute	NC_GLOBAL	people_2_affiliation_acronym	String	WHOI BCO-DMO
attribute	NC_GLOBAL	people_2_person_name	String	Nancy Copley
attribute	NC_GLOBAL	people_2_person_nid	String	50396
attribute	NC_GLOBAL	people_2_role	String	BCO-DMO Data Manager
attribute	NC_GLOBAL	people_2_role_type	String	related
attribute	NC_GLOBAL	project	String	Host Symbiont Temp Response
attribute	NC_GLOBAL	projects_0_acronym	String	Host Symbiont Temp Response
attribute	NC_GLOBAL	projects_0_description	String	Description from NSF award abstract: On coral reefs, mutualisms with single celled algae (Symbiodinium) and reef species literally and figuratively form the foundation of reef ecosystems. Coral reefs are among the most threatened ecosystems under a changing climate and are rapidly declining due to increasing levels of environmental stress, namely increased temperatures. Climate change is resulting in even warmer ocean temperatures that threaten associations between Symbiodinium and their hosts. In this project the investigators examine the genetic diversity of Symbiodinium and the potential for this important species to evolve in response to temperature. The project will also address whether the ecological and evolutionary dynamics of the Symbiodinium population affect the performance of their host. If so, this suggests that the evolution of microscopic organisms with short generation times could confer adaptation to longer-lived host species on ecologically and economically vital coral reefs. Given that diversity is already being lost on many reefs, considering how evolutionary changes in Symbiodinium will affect reef species is crucial for predicting the responses of reefs to future climate change. This project provides training for two graduate students and several undergraduates at a Hispanic-serving institution. This work includes outreach to the students and the general public through the Aquarium of Niagara, local K-12 schools, and web-based education modules. The effects of evolution on contemporary ecological processes are at the forefront of research in evolutionary ecology. This project will answer the call for experiments elucidating the effects of genetic variation in Symbiodinium performance and the effect on the response of the holobiont (host and symbiont) to increased temperature. These experiments examine the effects of temperature through both ecological and evolutionary mechanisms and will determine the relative importance of adaptation and acclimatization in replicated experimental populations. The investigators will examine how genetic variation within a species (Symbiodinium antillogorgium) affects symbiont performance in culture and in the host and how this affects the response of the holobiont to increased temperature. Further, the project examines whether holobiont response to increased temperature associated with climate change depends on particular GxG host-symbiont combinations. Moreover, the investigators will examine the effects of symbiont history on mutualist hosts, which have been largely ignored in eco-evolutionary studies. These experiments provide a first step in predicting whether invertebrate hosts on coral reefs will respond to global change via adaptation of their symbionts.
attribute	NC_GLOBAL	projects_0_end_date	String	2020-03
attribute	NC_GLOBAL	projects_0_geolocation	String	Florida Keys, Caribbean
attribute	NC_GLOBAL	projects_0_name	String	RUI: Collaborative Research: Genetic variation as a driver of host and symbiont response to increased temperature on coral reefs
attribute	NC_GLOBAL	projects_0_project_nid	String	632538
attribute	NC_GLOBAL	projects_0_start_date	String	2016-04
attribute	NC_GLOBAL	publisher_name	String	Biological and Chemical Oceanographic Data Management Office (BCO-DMO)
attribute	NC_GLOBAL	publisher_type	String	institution
attribute	NC_GLOBAL	sourceUrl	String	(local files)
attribute	NC_GLOBAL	standard_name_vocabulary	String	CF Standard Name Table v55
attribute	NC_GLOBAL	summary	String	Traits of three genotypes measured at ambient and elevated temperatures. Replicates of each Symbiodinium genotype were grown in ambient (26 degrees) and elevated (30 degrees) temperatures, after which were measured physiological parameters, including the number of cells, quantum yield, variable fluorescence, and chlorophyll content.
attribute	NC_GLOBAL	title	String	[Symbiodinium genotype responses to temperature] - Traits of three Symbiodinium genotypes measured at ambient and elevated temperatures (RUI: Collaborative Research: Genetic variation as a driver of host and symbiont response to increased temperature on coral reefs)
attribute	NC_GLOBAL	version	String	1
attribute	NC_GLOBAL	xml_source	String	osprey2erddap.update_xml() v1.3
variable	Genotype		String
attribute	Genotype	bcodmo_name	String	sample
attribute	Genotype	description	String	Genetic idenetifier
attribute	Genotype	long_name	String	Genotype
attribute	Genotype	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P02/current/ACYC/
attribute	Genotype	units	String	unitless
variable	Temp		byte
attribute	Temp	_FillValue	byte	127
attribute	Temp	actual_range	byte	26, 30
attribute	Temp	bcodmo_name	String	temperature
attribute	Temp	description	String	Temperature
attribute	Temp	long_name	String	Temperature
attribute	Temp	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P01/current/TEMPP901/
attribute	Temp	units	String	degrees Celsius
variable	Replicate		String
attribute	Replicate	bcodmo_name	String	replicate
attribute	Replicate	description	String	Replicate identifier, designated as 'a' through 'e'.
attribute	Replicate	long_name	String	Replicate
attribute	Replicate	units	String	unitless
variable	NumberCells		int
attribute	NumberCells	_FillValue	int	2147483647
attribute	NumberCells	actual_range	int	2949167, 10500000
attribute	NumberCells	bcodmo_name	String	cell_concentration
attribute	NumberCells	colorBarMaximum	double	100.0
attribute	NumberCells	colorBarMinimum	double	0.0
attribute	NumberCells	description	String	Number of cells per mL
attribute	NumberCells	long_name	String	Number Cells
attribute	NumberCells	units	String	number cells/milliliter (#/mL)
variable	QY		float
attribute	QY	_FillValue	float	NaN
attribute	QY	actual_range	float	0.17, 0.435
attribute	QY	bcodmo_name	String	Fv2Fm
attribute	QY	description	String	Quantum Yield
attribute	QY	long_name	String	QY
attribute	QY	units	String	unitless ratio
variable	Vfl		float
attribute	Vfl	_FillValue	float	NaN
attribute	Vfl	actual_range	float	10123.5, 20346.25
attribute	Vfl	bcodmo_name	String	Fv2Fm
attribute	Vfl	description	String	Variable Fluorescence
attribute	Vfl	long_name	String	VFL
attribute	Vfl	units	String	unitless
variable	Chla		double
attribute	Chla	_FillValue	double	NaN
attribute	Chla	actual_range	double	762620.5, 5026724.0
attribute	Chla	bcodmo_name	String	chlorophyll a
attribute	Chla	colorBarMaximum	double	30.0
attribute	Chla	colorBarMinimum	double	0.03
attribute	Chla	colorBarScale	String	Log
attribute	Chla	description	String	Total Chlorophyll per sample
attribute	Chla	long_name	String	Concentration Of Chlorophyll In Sea Water
attribute	Chla	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P01/current/CPHLHPP1/
attribute	Chla	units	String	Relative Fluorescence Units
variable	Chlapercell		double
attribute	Chlapercell	_FillValue	double	NaN
attribute	Chlapercell	actual_range	double	0.099170416, 0.806857785
attribute	Chlapercell	bcodmo_name	String	chlorophyll a
attribute	Chlapercell	description	String	Chlorophyll per cell
attribute	Chlapercell	long_name	String	Chlapercell
attribute	Chlapercell	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P01/current/CPHLHPP1/
attribute	Chlapercell	units	String	Relative Fluorescence Units

The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.