ERDDAP > info > bcodmo_dataset_748064

Grid DAP Data	Sub- set	Table DAP Data	Make A Graph	W M S	Source Data Files	Acces- sible	Title	Sum- mary	FGDC, ISO, Metadata	Back- ground Info	RSS	E mail	Institution	Dataset ID
		data	graph		files	public	[OTU table for 18S rRNA gene tag sequences from DNA and RNA] - Operational taxonomic unit (OTU) table for 18S rRNA gene tag sequences from DNA and RNA from samples collected in coastal California in 2013 and 2014 (Protistan, prokaryotic, and viral processes at the San Pedro Ocean Time-series)		I   M	background			BCO-DMO	bcodmo_dataset_748064

The Dataset's Variables and Attributes

Row Type	Variable Name	Attribute Name	Data Type	Value
attribute	NC_GLOBAL	access_formats	String	.htmlTable,.csv,.json,.mat,.nc,.tsv
attribute	NC_GLOBAL	acquisition_description	String	These data were published in Hu et al., 2016. This dataset is a raw output\u00a0operational taxonomic unit (OTU) table generated by processing and clustering raw 18S rRNA gene tag sequences from DNA and RNA. The numbers in each column represent the number of sequences from that sample belonging to a given OTU (row), with the last column listing the taxonomic ID assigned to each OTU.\u00a0The raw sequence data can be found in the NCBI SRA database under accession number\u00a0[SRP070577](\\"https://www.ncbi.nlm.nih.gov/sra/SRP070577\\")\u00a0with the associated\u00a0BioProject\u00a0[PRJNA311248](\\"https://www.ncbi.nlm.nih.gov//bioproject/PRJNA311248\\").\u00a0 Metadata for these sequences can be found in the dataset: \u201d18S rRNA gene tag sequences from DNA and RNA\": [https://www.bco- dmo.org/dataset/745527](\\"https://www.bco-dmo.org/dataset/745527\\") Nucleotide bases with a Q score lower than 20 for the last 30 bp of each sequence were trimmed. Paired-end sequences were merged using FLASh (Magoc and Salzberg 2011) with a minimum of 10 bp and maximum of 150 bp overlap between each sequence pair. Sequences shorter than 350 bp, longer than 460 bp, or which had an average quality score lower than 25 were discarded using QIIME v1.8 (Caporaso et al. 2010). Chimeric sequences were identified and removed, by either de novo or reference-based chimera checking (identify chimeric seqs.py in QIIME, intersection method).\u00a0 The code release v2 associated with this version of the dataset can be downloaded as a .zip file from the Supplemental\u00a0Documents section of this page. Future code updates will be accessible from the GitHub repository\u00a0[https://github.com/shu251/V4_tagsequencing_18Sdiversity_q1](\\"https://github.com/shu251/V4_tagsequencing_18Sdiversity_q1\\").
attribute	NC_GLOBAL	awards_0_award_nid	String	743048
attribute	NC_GLOBAL	awards_0_award_number	String	OCE-1737409
attribute	NC_GLOBAL	awards_0_data_url	String	http://www.nsf.gov/awardsearch/showAward.do?AwardNumber=1737409
attribute	NC_GLOBAL	awards_0_funder_name	String	NSF Division of Ocean Sciences
attribute	NC_GLOBAL	awards_0_funding_acronym	String	NSF OCE
attribute	NC_GLOBAL	awards_0_funding_source_nid	String	355
attribute	NC_GLOBAL	awards_0_program_manager	String	David L. Garrison
attribute	NC_GLOBAL	awards_0_program_manager_nid	String	50534
attribute	NC_GLOBAL	cdm_data_type	String	Other
attribute	NC_GLOBAL	comment	String	OTU table PI: David Caron Data Version 1: 2019-07-24
attribute	NC_GLOBAL	Conventions	String	COARDS, CF-1.6, ACDD-1.3
attribute	NC_GLOBAL	creator_email	String	info at bco-dmo.org
attribute	NC_GLOBAL	creator_name	String	BCO-DMO
attribute	NC_GLOBAL	creator_type	String	institution
attribute	NC_GLOBAL	creator_url	String	https://www.bco-dmo.org/
attribute	NC_GLOBAL	data_source	String	extract_data_as_tsv version 2.3 19 Dec 2019
attribute	NC_GLOBAL	dataset_current_state	String	Final and no updates
attribute	NC_GLOBAL	date_created	String	2018-10-15T19:00:09Z
attribute	NC_GLOBAL	date_modified	String	2020-03-06T17:42:26Z
attribute	NC_GLOBAL	defaultDataQuery	String	&time<now
attribute	NC_GLOBAL	doi	String	10.26008/1912/bco-dmo.748064.1
attribute	NC_GLOBAL	infoUrl	String	https://www.bco-dmo.org/dataset/748064
attribute	NC_GLOBAL	institution	String	BCO-DMO
attribute	NC_GLOBAL	instruments_0_acronym	String	Niskin bottle
attribute	NC_GLOBAL	instruments_0_dataset_instrument_nid	String	748072
attribute	NC_GLOBAL	instruments_0_description	String	A Niskin bottle (a next generation water sampler based on the Nansen bottle) is a cylindrical, non-metallic water collection device with stoppers at both ends. The bottles can be attached individually on a hydrowire or deployed in 12, 24, or 36 bottle Rosette systems mounted on a frame and combined with a CTD. Niskin bottles are used to collect discrete water samples for a range of measurements including pigments, nutrients, plankton, etc.
attribute	NC_GLOBAL	instruments_0_instrument_external_identifier	String	https://vocab.nerc.ac.uk/collection/L22/current/TOOL0412/
attribute	NC_GLOBAL	instruments_0_instrument_name	String	Niskin bottle
attribute	NC_GLOBAL	instruments_0_instrument_nid	String	413
attribute	NC_GLOBAL	instruments_1_acronym	String	CTD SBE 911plus
attribute	NC_GLOBAL	instruments_1_dataset_instrument_nid	String	748073
attribute	NC_GLOBAL	instruments_1_description	String	The Sea-Bird SBE 911plus is a type of CTD instrument package for continuous measurement of conductivity, temperature and pressure. The SBE 911plus includes the SBE 9plus Underwater Unit and the SBE 11plus Deck Unit (for real-time readout using conductive wire) for deployment from a vessel. The combination of the SBE 9plus and SBE 11plus is called a SBE 911plus. The SBE 9plus uses Sea-Bird's standard modular temperature and conductivity sensors (SBE 3plus and SBE 4). The SBE 9plus CTD can be configured with up to eight auxiliary sensors to measure other parameters including dissolved oxygen, pH, turbidity, fluorescence, light (PAR), light transmission, etc.). more information from Sea-Bird Electronics
attribute	NC_GLOBAL	instruments_1_instrument_external_identifier	String	https://vocab.nerc.ac.uk/collection/L22/current/TOOL0058/
attribute	NC_GLOBAL	instruments_1_instrument_name	String	CTD Sea-Bird SBE 911plus
attribute	NC_GLOBAL	instruments_1_instrument_nid	String	591
attribute	NC_GLOBAL	instruments_2_acronym	String	Automated Sequencer
attribute	NC_GLOBAL	instruments_2_dataset_instrument_nid	String	748071
attribute	NC_GLOBAL	instruments_2_description	String	General term for a laboratory instrument used for deciphering the order of bases in a strand of DNA. Sanger sequencers detect fluorescence from different dyes that are used to identify the A, C, G, and T extension reactions. Contemporary or Pyrosequencer methods are based on detecting the activity of DNA polymerase (a DNA synthesizing enzyme) with another chemoluminescent enzyme. Essentially, the method allows sequencing of a single strand of DNA by synthesizing the complementary strand along it, one base pair at a time, and detecting which base was actually added at each step.
attribute	NC_GLOBAL	instruments_2_instrument_name	String	Automated DNA Sequencer
attribute	NC_GLOBAL	instruments_2_instrument_nid	String	649
attribute	NC_GLOBAL	instruments_2_supplied_name	String	Illumina MiSeq
attribute	NC_GLOBAL	keywords	String	150m, 890m, April_150m_cDNA, April_150m_DNA, April_5m_cDNA, April_5m_DNA, April_890m_cDNA, April_890m_DNA, April_CAT_cDNA, April_CAT_DNA, April_DCM_cDNA, April_DCM_DNA, April_POLA_cDNA, April_POLA_DNA, bco, bco-dmo, biological, cat, chemical, data, dataset, dcm, dmo, dna, erddap, Jan_150m_cDNA, Jan_150m_DNA, Jan_5m_cDNA, Jan_5m_DNA, Jan_890m_cDNA, Jan_890m_DNA, Jan_CAT_cDNA, Jan_CAT_DNA, Jan_DCM_cDNA, Jan_DCM_DNA, Jan_POLA_cDNA, Jan_POLA_DNA, July_150m_cDNA, July_150m_DNA, July_5m_cDNA, July_5m_DNA, July_890m_cDNA, July_890m_DNA, July_CAT_cDNA, July_CAT_DNA, July_DCM_cDNA, July_DCM_DNA, July_POLA_cDNA, July_POLA_DNA, management, oceanography, Oct_150m_cDNA, Oct_150m_DNA, Oct_5m_cDNA, Oct_5m_DNA, Oct_890m_cDNA, Oct_890m_DNA, Oct_CAT_cDNA, Oct_CAT_DNA, Oct_DCM_cDNA, Oct_DCM_DNA, Oct_POLA_cDNA, Oct_POLA_DNA, office, otu, OTU_ID, pola, preliminary, taxonomy
attribute	NC_GLOBAL	license	String	https://www.bco-dmo.org/dataset/748064/license
attribute	NC_GLOBAL	metadata_source	String	https://www.bco-dmo.org/api/dataset/748064
attribute	NC_GLOBAL	param_mapping	String	{'748064': {}}
attribute	NC_GLOBAL	parameter_source	String	https://www.bco-dmo.org/mapserver/dataset/748064/parameters
attribute	NC_GLOBAL	people_0_affiliation	String	University of Southern California
attribute	NC_GLOBAL	people_0_affiliation_acronym	String	USC
attribute	NC_GLOBAL	people_0_person_name	String	David Caron
attribute	NC_GLOBAL	people_0_person_nid	String	50524
attribute	NC_GLOBAL	people_0_role	String	Principal Investigator
attribute	NC_GLOBAL	people_0_role_type	String	originator
attribute	NC_GLOBAL	people_1_affiliation	String	University of Southern California
attribute	NC_GLOBAL	people_1_affiliation_acronym	String	USC
attribute	NC_GLOBAL	people_1_person_name	String	Sarah K. Hu
attribute	NC_GLOBAL	people_1_person_nid	String	745520
attribute	NC_GLOBAL	people_1_role	String	Co-Principal Investigator
attribute	NC_GLOBAL	people_1_role_type	String	originator
attribute	NC_GLOBAL	people_2_affiliation	String	University of Southern California
attribute	NC_GLOBAL	people_2_affiliation_acronym	String	USC
attribute	NC_GLOBAL	people_2_person_name	String	Sarah K. Hu
attribute	NC_GLOBAL	people_2_person_nid	String	745520
attribute	NC_GLOBAL	people_2_role	String	Contact
attribute	NC_GLOBAL	people_2_role_type	String	related
attribute	NC_GLOBAL	people_3_affiliation	String	Woods Hole Oceanographic Institution
attribute	NC_GLOBAL	people_3_affiliation_acronym	String	WHOI BCO-DMO
attribute	NC_GLOBAL	people_3_person_name	String	Amber D. York
attribute	NC_GLOBAL	people_3_person_nid	String	643627
attribute	NC_GLOBAL	people_3_role	String	BCO-DMO Data Manager
attribute	NC_GLOBAL	people_3_role_type	String	related
attribute	NC_GLOBAL	project	String	SPOT
attribute	NC_GLOBAL	projects_0_acronym	String	SPOT
attribute	NC_GLOBAL	projects_0_description	String	Planktonic marine microbial communities consist of a diverse collection of bacteria, archaea, viruses, protists (phytoplankton and protozoa) and small animals (metazoan). Collectively, these species are responsible for virtually all marine pelagic primary production where they form the basis of food webs and carry out a large fraction of respiratory processes. Microbial interactions include the traditional role of predation, but recent research recognizes the importance of parasitism, symbiosis and viral infection. Characterizing the response of pelagic microbial communities and processes to environmental influences is fundamental to understanding and modeling carbon flow and energy utilization in the ocean, but very few studies have attempted to study all of these assemblages in the same study. This project is comprised of long-term (monthly) and short-term (daily) sampling at the San Pedro Ocean Time-series (SPOT) site. Analysis of the resulting datasets investigates co-occurrence patterns of microbial taxa (e.g. protist-virus and protist-prokaryote interactions, both positive and negative) indicating which species consistently co-occur and potentially interact, followed by examination gene expression to help define the underlying mechanisms. This study augments 20 years of baseline studies of microbial abundance, diversity, rates at the site, and will enable detection of low-frequency changes in composition and potential ecological interactions among microbes, and their responses to changing environmental forcing factors. These responses have important consequences for higher trophic levels and ocean-atmosphere feedbacks. The broader impacts of this project include training graduate and undergraduate students, providing local high school student with summer lab experiences, and PI presentations at local K-12 schools, museums, aquaria and informal learning centers in the region. Additionally, the PIs advise at the local, county and state level regarding coastal marine water quality. This research project is unique in that it is a holistic study (including all microbes from viruses to small metazoa) of microbial species diversity and ecological activities, carried out at the SPOT site off the coast of southern California. In studying all microbes simultaneously, this work aims to identify important ecological interactions among microbial species, and identify the basis(es) for those interactions. This research involves (1) extensive analyses of prokaryote (archaean and bacterial) and eukaryote (protistan and micro-metazoan) diversity via the sequencing of marker genes, (2) studies of whole-community gene expression by eukaryotes and prokaryotes in order to identify key functional characteristics of microorganismal groups and the detection of active viral infections, and (3) metagenomic analysis of viruses and bacteria to aid interpretation of transcriptomic analyses using genome-encoded information. The project includes exploratory metatranscriptomic analysis of poorly-understood aphotic and hypoxic-zone protists, to examine their stratification, functions and hypothesized prokaryotic symbioses.
attribute	NC_GLOBAL	projects_0_end_date	String	2021-07
attribute	NC_GLOBAL	projects_0_geolocation	String	San Pedro Channel off the coast of Los Angeles
attribute	NC_GLOBAL	projects_0_name	String	Protistan, prokaryotic, and viral processes at the San Pedro Ocean Time-series
attribute	NC_GLOBAL	projects_0_project_nid	String	743049
attribute	NC_GLOBAL	projects_0_start_date	String	2017-08
attribute	NC_GLOBAL	publisher_name	String	Biological and Chemical Oceanographic Data Management Office (BCO-DMO)
attribute	NC_GLOBAL	publisher_type	String	institution
attribute	NC_GLOBAL	sourceUrl	String	(local files)
attribute	NC_GLOBAL	standard_name_vocabulary	String	CF Standard Name Table v55
attribute	NC_GLOBAL	summary	String	This dataset is a raw output operational taxonomic unit (OTU) table generated by processing and clustering raw 18S rRNA gene tag sequences from extracted DNA and RNA. Columns represent samples, including month sampled, material (either extracted RNA or DNA), and depth (in meters); thus values in each column represent the number of sequences in that sample that belong to a given OTU (OTUs by row). Each row represents a single OTU. The last column lists the taxonomic identifier assigned to each OTU. The raw sequence data can be found in the NCBI SRA database under accession number SRP070577 with the associated BioProject PRJNA311248.
attribute	NC_GLOBAL	title	String	[OTU table for 18S rRNA gene tag sequences from DNA and RNA] - Operational taxonomic unit (OTU) table for 18S rRNA gene tag sequences from DNA and RNA from samples collected in coastal California in 2013 and 2014 (Protistan, prokaryotic, and viral processes at the San Pedro Ocean Time-series)
attribute	NC_GLOBAL	version	String	1
attribute	NC_GLOBAL	xml_source	String	osprey2erddap.update_xml() v1.5
variable	OTU_ID		String
attribute	OTU_ID	bcodmo_name	String	taxon_code
attribute	OTU_ID	description	String	Taxonomic designations called Operational Taxonomic Units
attribute	OTU_ID	long_name	String	OTU ID
attribute	OTU_ID	units	String	unitless
variable	April_150m_DNA		short
attribute	April_150m_DNA	_FillValue	short	32767
attribute	April_150m_DNA	actual_range	short	0, 21841
attribute	April_150m_DNA	bcodmo_name	String	sequence
attribute	April_150m_DNA	description	String	DNA sequences from April at 150m depth at SPOT
attribute	April_150m_DNA	long_name	String	April 150m DNA
attribute	April_150m_DNA	units	String	unitless
variable	July_DCM_DNA		short
attribute	July_DCM_DNA	_FillValue	short	32767
attribute	July_DCM_DNA	actual_range	short	0, 15305
attribute	July_DCM_DNA	bcodmo_name	String	sequence
attribute	July_DCM_DNA	description	String	DNA sequences from July at the DCM at SPOT
attribute	July_DCM_DNA	long_name	String	July DCM DNA
attribute	July_DCM_DNA	units	String	unitless
variable	April_890m_DNA		short
attribute	April_890m_DNA	_FillValue	short	32767
attribute	April_890m_DNA	actual_range	short	0, 5012
attribute	April_890m_DNA	bcodmo_name	String	sequence
attribute	April_890m_DNA	description	String	DNA sequences from April at 890m depth at SPOT
attribute	April_890m_DNA	long_name	String	April 890m DNA
attribute	April_890m_DNA	units	String	unitless
variable	Oct_DCM_DNA		short
attribute	Oct_DCM_DNA	_FillValue	short	32767
attribute	Oct_DCM_DNA	actual_range	short	0, 6150
attribute	Oct_DCM_DNA	bcodmo_name	String	sequence
attribute	Oct_DCM_DNA	description	String	DNA sequences from Oct at the DCM at SPOT
attribute	Oct_DCM_DNA	long_name	String	Oct DCM DNA
attribute	Oct_DCM_DNA	units	String	unitless
variable	Oct_150m_DNA		int
attribute	Oct_150m_DNA	_FillValue	int	2147483647
attribute	Oct_150m_DNA	actual_range	int	0, 48601
attribute	Oct_150m_DNA	bcodmo_name	String	sequence
attribute	Oct_150m_DNA	description	String	DNA sequences from Oct at 150m depth at SPOT
attribute	Oct_150m_DNA	long_name	String	Oct 150m DNA
attribute	Oct_150m_DNA	units	String	unitless
variable	July_150m_DNA		short
attribute	July_150m_DNA	_FillValue	short	32767
attribute	July_150m_DNA	actual_range	short	0, 20621
attribute	July_150m_DNA	bcodmo_name	String	sequence
attribute	July_150m_DNA	description	String	DNA sequences from July at 150m depth at SPOT
attribute	July_150m_DNA	long_name	String	July 150m DNA
attribute	July_150m_DNA	units	String	unitless
variable	April_150m_cDNA		short
attribute	April_150m_cDNA	_FillValue	short	32767
attribute	April_150m_cDNA	actual_range	short	0, 6822
attribute	April_150m_cDNA	bcodmo_name	String	sequence
attribute	April_150m_cDNA	description	String	RNA(cDNA) sequences from April at 150m depth at SPOT
attribute	April_150m_cDNA	long_name	String	April 150m C DNA
attribute	April_150m_cDNA	units	String	unitless
variable	July_150m_cDNA		short
attribute	July_150m_cDNA	_FillValue	short	32767
attribute	July_150m_cDNA	actual_range	short	0, 12261
attribute	July_150m_cDNA	bcodmo_name	String	sequence
attribute	July_150m_cDNA	description	String	RNA(cDNA) sequences from July at 150m depth at SPOT
attribute	July_150m_cDNA	long_name	String	July 150m C DNA
attribute	July_150m_cDNA	units	String	unitless
variable	Jan_DCM_DNA		short
attribute	Jan_DCM_DNA	_FillValue	short	32767
attribute	Jan_DCM_DNA	actual_range	short	0, 11057
attribute	Jan_DCM_DNA	bcodmo_name	String	sequence
attribute	Jan_DCM_DNA	description	String	DNA sequences from Jan at the DCM at SPOT
attribute	Jan_DCM_DNA	long_name	String	Jan DCM DNA
attribute	Jan_DCM_DNA	units	String	unitless
variable	Jan_150m_DNA		short
attribute	Jan_150m_DNA	_FillValue	short	32767
attribute	Jan_150m_DNA	actual_range	short	0, 11928
attribute	Jan_150m_DNA	bcodmo_name	String	sequence
attribute	Jan_150m_DNA	description	String	DNA sequences from Jan at 150m depth at SPOT
attribute	Jan_150m_DNA	long_name	String	Jan 150m DNA
attribute	Jan_150m_DNA	units	String	unitless
variable	April_CAT_DNA		short
attribute	April_CAT_DNA	_FillValue	short	32767
attribute	April_CAT_DNA	actual_range	short	0, 14271
attribute	April_CAT_DNA	bcodmo_name	String	sequence
attribute	April_CAT_DNA	description	String	DNA sequences from April at the surface at Catalina Island
attribute	April_CAT_DNA	long_name	String	April CAT DNA
attribute	April_CAT_DNA	units	String	unitless
variable	April_5m_DNA		int
attribute	April_5m_DNA	_FillValue	int	2147483647
attribute	April_5m_DNA	actual_range	int	0, 44276
attribute	April_5m_DNA	bcodmo_name	String	sequence
attribute	April_5m_DNA	description	String	DNA sequences from April at 5m depth at SPOT
attribute	April_5m_DNA	long_name	String	April 5m DNA
attribute	April_5m_DNA	units	String	unitless
variable	July_POLA_DNA		short
attribute	July_POLA_DNA	_FillValue	short	32767
attribute	July_POLA_DNA	actual_range	short	0, 10078
attribute	July_POLA_DNA	bcodmo_name	String	sequence
attribute	July_POLA_DNA	description	String	DNA sequences from July at the surface at the Port of Los Angeles
attribute	July_POLA_DNA	long_name	String	July POLA DNA
attribute	July_POLA_DNA	units	String	unitless
variable	July_CAT_DNA		int
attribute	July_CAT_DNA	_FillValue	int	2147483647
attribute	July_CAT_DNA	actual_range	int	0, 41668
attribute	July_CAT_DNA	bcodmo_name	String	sequence
attribute	July_CAT_DNA	description	String	DNA sequences from July at the surface at Catalina Island
attribute	July_CAT_DNA	long_name	String	July CAT DNA
attribute	July_CAT_DNA	units	String	unitless
variable	July_5m_DNA		int
attribute	July_5m_DNA	_FillValue	int	2147483647
attribute	July_5m_DNA	actual_range	int	0, 54326
attribute	July_5m_DNA	bcodmo_name	String	sequence
attribute	July_5m_DNA	description	String	DNA sequences from July at 5m depth at SPOT
attribute	July_5m_DNA	long_name	String	July 5m DNA
attribute	July_5m_DNA	units	String	unitless
variable	April_5m_cDNA		int
attribute	April_5m_cDNA	_FillValue	int	2147483647
attribute	April_5m_cDNA	actual_range	int	0, 41114
attribute	April_5m_cDNA	bcodmo_name	String	sequence
attribute	April_5m_cDNA	description	String	RNA(cDNA) sequences from April at 5m depth at SPOT
attribute	April_5m_cDNA	long_name	String	April 5m C DNA
attribute	April_5m_cDNA	units	String	unitless
variable	July_CAT_cDNA		short
attribute	July_CAT_cDNA	_FillValue	short	32767
attribute	July_CAT_cDNA	actual_range	short	0, 8890
attribute	July_CAT_cDNA	bcodmo_name	String	sequence
attribute	July_CAT_cDNA	description	String	RNA(cDNA) sequences from July at the surface at Catalina Island
attribute	July_CAT_cDNA	long_name	String	July CAT C DNA
attribute	July_CAT_cDNA	units	String	unitless
variable	July_5m_cDNA		int
attribute	July_5m_cDNA	_FillValue	int	2147483647
attribute	July_5m_cDNA	actual_range	int	0, 34962
attribute	July_5m_cDNA	bcodmo_name	String	sequence
attribute	July_5m_cDNA	description	String	RNA(cDNA) sequences from July at 5m depth at SPOT
attribute	July_5m_cDNA	long_name	String	July 5m C DNA
attribute	July_5m_cDNA	units	String	unitless
variable	Oct_CAT_DNA		short
attribute	Oct_CAT_DNA	_FillValue	short	32767
attribute	Oct_CAT_DNA	actual_range	short	0, 9237
attribute	Oct_CAT_DNA	bcodmo_name	String	sequence
attribute	Oct_CAT_DNA	description	String	DNA sequences from Oct at the surface at Catalina Island
attribute	Oct_CAT_DNA	long_name	String	Oct CAT DNA
attribute	Oct_CAT_DNA	units	String	unitless
variable	April_CAT_cDNA		short
attribute	April_CAT_cDNA	_FillValue	short	32767
attribute	April_CAT_cDNA	actual_range	short	0, 4027
attribute	April_CAT_cDNA	bcodmo_name	String	sequence
attribute	April_CAT_cDNA	description	String	RNA(cDNA) sequences from April at the surface at Catalina Island
attribute	April_CAT_cDNA	long_name	String	April CAT C DNA
attribute	April_CAT_cDNA	units	String	unitless
variable	Oct_POLA_DNA		short
attribute	Oct_POLA_DNA	_FillValue	short	32767
attribute	Oct_POLA_DNA	actual_range	short	0, 7870
attribute	Oct_POLA_DNA	bcodmo_name	String	sequence
attribute	Oct_POLA_DNA	description	String	DNA sequences from Oct at the surface at the Port of Los Angeles
attribute	Oct_POLA_DNA	long_name	String	Oct POLA DNA
attribute	Oct_POLA_DNA	units	String	unitless
variable	Oct_5m_DNA		short
attribute	Oct_5m_DNA	_FillValue	short	32767
attribute	Oct_5m_DNA	actual_range	short	0, 21238
attribute	Oct_5m_DNA	bcodmo_name	String	sequence
attribute	Oct_5m_DNA	description	String	DNA sequences from Oct at 5m depth at SPOT
attribute	Oct_5m_DNA	long_name	String	Oct 5m DNA
attribute	Oct_5m_DNA	units	String	unitless
variable	Oct_CAT_cDNA		short
attribute	Oct_CAT_cDNA	_FillValue	short	32767
attribute	Oct_CAT_cDNA	actual_range	short	0, 13068
attribute	Oct_CAT_cDNA	bcodmo_name	String	sequence
attribute	Oct_CAT_cDNA	description	String	RNA(cDNA) sequences from Oct at the surface at Catalina Island
attribute	Oct_CAT_cDNA	long_name	String	Oct CAT C DNA
attribute	Oct_CAT_cDNA	units	String	unitless
variable	Oct_5m_cDNA		short
attribute	Oct_5m_cDNA	_FillValue	short	32767
attribute	Oct_5m_cDNA	actual_range	short	0, 13778
attribute	Oct_5m_cDNA	bcodmo_name	String	sequence
attribute	Oct_5m_cDNA	description	String	RNA(cDNA) sequences from Oct at 5m depth at SPOT
attribute	Oct_5m_cDNA	long_name	String	Oct 5m C DNA
attribute	Oct_5m_cDNA	units	String	unitless
variable	Jan_CAT_DNA		short
attribute	Jan_CAT_DNA	_FillValue	short	32767
attribute	Jan_CAT_DNA	actual_range	short	0, 4128
attribute	Jan_CAT_DNA	bcodmo_name	String	sequence
attribute	Jan_CAT_DNA	description	String	DNA sequences from Jan at the surface at Catalina Island
attribute	Jan_CAT_DNA	long_name	String	Jan CAT DNA
attribute	Jan_CAT_DNA	units	String	unitless
variable	Jan_5m_DNA		int
attribute	Jan_5m_DNA	_FillValue	int	2147483647
attribute	Jan_5m_DNA	actual_range	int	0, 85900
attribute	Jan_5m_DNA	bcodmo_name	String	sequence
attribute	Jan_5m_DNA	description	String	DNA sequences from Jan at 5m depth at SPOT
attribute	Jan_5m_DNA	long_name	String	Jan 5m DNA
attribute	Jan_5m_DNA	units	String	unitless
variable	Jan_POLA_DNA		short
attribute	Jan_POLA_DNA	_FillValue	short	32767
attribute	Jan_POLA_DNA	actual_range	short	0, 11517
attribute	Jan_POLA_DNA	bcodmo_name	String	sequence
attribute	Jan_POLA_DNA	description	String	DNA sequences from Jan at the surface at the Port of Los Angeles
attribute	Jan_POLA_DNA	long_name	String	Jan POLA DNA
attribute	Jan_POLA_DNA	units	String	unitless
variable	Jan_5m_cDNA		short
attribute	Jan_5m_cDNA	_FillValue	short	32767
attribute	Jan_5m_cDNA	actual_range	short	0, 9762
attribute	Jan_5m_cDNA	bcodmo_name	String	sequence
attribute	Jan_5m_cDNA	description	String	RNA(cDNA) sequences from Jan at 5m depth at SPOT
attribute	Jan_5m_cDNA	long_name	String	Jan 5m C DNA
attribute	Jan_5m_cDNA	units	String	unitless
variable	April_DCM_DNA		short
attribute	April_DCM_DNA	_FillValue	short	32767
attribute	April_DCM_DNA	actual_range	short	0, 6241
attribute	April_DCM_DNA	bcodmo_name	String	sequence
attribute	April_DCM_DNA	description	String	DNA sequences from April at the DCM at SPOT
attribute	April_DCM_DNA	long_name	String	April DCM DNA
attribute	April_DCM_DNA	units	String	unitless
variable	Jan_CAT_cDNA		short
attribute	Jan_CAT_cDNA	_FillValue	short	32767
attribute	Jan_CAT_cDNA	actual_range	short	0, 4167
attribute	Jan_CAT_cDNA	bcodmo_name	String	sequence
attribute	Jan_CAT_cDNA	description	String	RNA(cDNA) sequences from Jan at the surface at Catalina Island
attribute	Jan_CAT_cDNA	long_name	String	Jan CAT C DNA
attribute	Jan_CAT_cDNA	units	String	unitless
variable	July_DCM_cDNA		short
attribute	July_DCM_cDNA	_FillValue	short	32767
attribute	July_DCM_cDNA	actual_range	short	0, 4126
attribute	July_DCM_cDNA	bcodmo_name	String	sequence
attribute	July_DCM_cDNA	description	String	RNA(cDNA) sequences from July at the DCM at SPOT
attribute	July_DCM_cDNA	long_name	String	July DCM C DNA
attribute	July_DCM_cDNA	units	String	unitless
variable	April_DCM_cDNA		int
attribute	April_DCM_cDNA	_FillValue	int	2147483647
attribute	April_DCM_cDNA	actual_range	int	0, 36115
attribute	April_DCM_cDNA	bcodmo_name	String	sequence
attribute	April_DCM_cDNA	description	String	RNA(cDNA) sequences from April at the DCM at SPOT
attribute	April_DCM_cDNA	long_name	String	April DCM C DNA
attribute	April_DCM_cDNA	units	String	unitless
variable	Oct_150m_cDNA		short
attribute	Oct_150m_cDNA	_FillValue	short	32767
attribute	Oct_150m_cDNA	actual_range	short	0, 17818
attribute	Oct_150m_cDNA	bcodmo_name	String	sequence
attribute	Oct_150m_cDNA	description	String	RNA(cDNA) sequences from Oct at 150m depth at SPOT
attribute	Oct_150m_cDNA	long_name	String	Oct 150m C DNA
attribute	Oct_150m_cDNA	units	String	unitless
variable	Jan_DCM_cDNA		short
attribute	Jan_DCM_cDNA	_FillValue	short	32767
attribute	Jan_DCM_cDNA	actual_range	short	0, 12655
attribute	Jan_DCM_cDNA	bcodmo_name	String	sequence
attribute	Jan_DCM_cDNA	description	String	RNA(cDNA) sequences from Jan at the DCM at SPOT
attribute	Jan_DCM_cDNA	long_name	String	Jan DCM C DNA
attribute	Jan_DCM_cDNA	units	String	unitless
variable	Jan_150m_cDNA		short
attribute	Jan_150m_cDNA	_FillValue	short	32767
attribute	Jan_150m_cDNA	actual_range	short	0, 5363
attribute	Jan_150m_cDNA	bcodmo_name	String	sequence
attribute	Jan_150m_cDNA	description	String	RNA(cDNA) sequences from Jan at 150m depth at SPOT
attribute	Jan_150m_cDNA	long_name	String	Jan 150m C DNA
attribute	Jan_150m_cDNA	units	String	unitless
variable	April_POLA_cDNA		short
attribute	April_POLA_cDNA	_FillValue	short	32767
attribute	April_POLA_cDNA	actual_range	short	0, 8474
attribute	April_POLA_cDNA	bcodmo_name	String	sequence
attribute	April_POLA_cDNA	description	String	RNA(cDNA) sequences from April at the surface at the Port of Los Angeles
attribute	April_POLA_cDNA	long_name	String	April POLA C DNA
attribute	April_POLA_cDNA	units	String	unitless
variable	July_POLA_cDNA		short
attribute	July_POLA_cDNA	_FillValue	short	32767
attribute	July_POLA_cDNA	actual_range	short	0, 1747
attribute	July_POLA_cDNA	bcodmo_name	String	sequence
attribute	July_POLA_cDNA	description	String	RNA(cDNA) sequences from July at the surface at the Port of Los Angeles
attribute	July_POLA_cDNA	long_name	String	July POLA C DNA
attribute	July_POLA_cDNA	units	String	unitless
variable	April_POLA_DNA		int
attribute	April_POLA_DNA	_FillValue	int	2147483647
attribute	April_POLA_DNA	actual_range	int	0, 34225
attribute	April_POLA_DNA	bcodmo_name	String	sequence
attribute	April_POLA_DNA	description	String	DNA sequences from April at the surface at the Port of Los Angeles
attribute	April_POLA_DNA	long_name	String	April POLA DNA
attribute	April_POLA_DNA	units	String	unitless
variable	Oct_POLA_cDNA		short
attribute	Oct_POLA_cDNA	_FillValue	short	32767
attribute	Oct_POLA_cDNA	actual_range	short	0, 4979
attribute	Oct_POLA_cDNA	bcodmo_name	String	sequence
attribute	Oct_POLA_cDNA	description	String	RNA(cDNA) sequences from Oct at the surface at the Port of Los Angeles
attribute	Oct_POLA_cDNA	long_name	String	Oct POLA C DNA
attribute	Oct_POLA_cDNA	units	String	unitless
variable	Jan_POLA_cDNA		short
attribute	Jan_POLA_cDNA	_FillValue	short	32767
attribute	Jan_POLA_cDNA	actual_range	short	0, 5356
attribute	Jan_POLA_cDNA	bcodmo_name	String	sequence
attribute	Jan_POLA_cDNA	description	String	RNA(cDNA) sequences from Jan at the surface at the Port of Los Angeles
attribute	Jan_POLA_cDNA	long_name	String	Jan POLA C DNA
attribute	Jan_POLA_cDNA	units	String	unitless
variable	July_890m_DNA		int
attribute	July_890m_DNA	_FillValue	int	2147483647
attribute	July_890m_DNA	actual_range	int	0, 36900
attribute	July_890m_DNA	bcodmo_name	String	sequence
attribute	July_890m_DNA	description	String	DNA sequences from July at 890m depth at SPOT
attribute	July_890m_DNA	long_name	String	July 890m DNA
attribute	July_890m_DNA	units	String	unitless
variable	July_890m_cDNA		short
attribute	July_890m_cDNA	_FillValue	short	32767
attribute	July_890m_cDNA	actual_range	short	0, 7020
attribute	July_890m_cDNA	bcodmo_name	String	sequence
attribute	July_890m_cDNA	description	String	RNA(cDNA) sequences from July at 890m depth at SPOT
attribute	July_890m_cDNA	long_name	String	July 890m C DNA
attribute	July_890m_cDNA	units	String	unitless
variable	Oct_DCM_cDNA		short
attribute	Oct_DCM_cDNA	_FillValue	short	32767
attribute	Oct_DCM_cDNA	actual_range	short	0, 22639
attribute	Oct_DCM_cDNA	bcodmo_name	String	sequence
attribute	Oct_DCM_cDNA	description	String	RNA(cDNA) sequences from Oct at the DCM at SPOT
attribute	Oct_DCM_cDNA	long_name	String	Oct DCM C DNA
attribute	Oct_DCM_cDNA	units	String	unitless
variable	Jan_890m_DNA		short
attribute	Jan_890m_DNA	_FillValue	short	32767
attribute	Jan_890m_DNA	actual_range	short	0, 12034
attribute	Jan_890m_DNA	bcodmo_name	String	sequence
attribute	Jan_890m_DNA	description	String	DNA sequences from Jan at 890m depth at SPOT
attribute	Jan_890m_DNA	long_name	String	Jan 890m DNA
attribute	Jan_890m_DNA	units	String	unitless
variable	Jan_890m_cDNA		int
attribute	Jan_890m_cDNA	_FillValue	int	2147483647
attribute	Jan_890m_cDNA	actual_range	int	0, 39471
attribute	Jan_890m_cDNA	bcodmo_name	String	sequence
attribute	Jan_890m_cDNA	description	String	RNA(cDNA) sequences from Jan at 890m depth at SPOT
attribute	Jan_890m_cDNA	long_name	String	Jan 890m C DNA
attribute	Jan_890m_cDNA	units	String	unitless
variable	Oct_890m_DNA		short
attribute	Oct_890m_DNA	_FillValue	short	32767
attribute	Oct_890m_DNA	actual_range	short	0, 32081
attribute	Oct_890m_DNA	bcodmo_name	String	sequence
attribute	Oct_890m_DNA	description	String	DNA sequences from Oct at 890m depth at SPOT
attribute	Oct_890m_DNA	long_name	String	Oct 890m DNA
attribute	Oct_890m_DNA	units	String	unitless
variable	Oct_890m_cDNA		int
attribute	Oct_890m_cDNA	_FillValue	int	2147483647
attribute	Oct_890m_cDNA	actual_range	int	0, 37061
attribute	Oct_890m_cDNA	bcodmo_name	String	sequence
attribute	Oct_890m_cDNA	description	String	RNA(cDNA) sequences from Oct at 890m depth at SPOT
attribute	Oct_890m_cDNA	long_name	String	Oct 890m C DNA
attribute	Oct_890m_cDNA	units	String	unitless
variable	April_890m_cDNA		short
attribute	April_890m_cDNA	_FillValue	short	32767
attribute	April_890m_cDNA	actual_range	short	0, 3950
attribute	April_890m_cDNA	bcodmo_name	String	sequence
attribute	April_890m_cDNA	description	String	RNA(cDNA) sequences from April at 890m depth at SPOT
attribute	April_890m_cDNA	long_name	String	April 890m C DNA
attribute	April_890m_cDNA	units	String	unitless
variable	taxonomy		String
attribute	taxonomy	bcodmo_name	String	taxon
attribute	taxonomy	description	String	Full taxonomic description from SILVA v111 database
attribute	taxonomy	long_name	String	Taxonomy
attribute	taxonomy	units	String	unitless

The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.