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     data   graph     files  public Environmental data from CTD during the Fall 2016 ESP deployment in Monterey Bay, CA    ?     I   M   background (external link) RSS BCO-DMO bcodmo_dataset_756376

The Dataset's Variables and Attributes

Row Type Variable Name Attribute Name Data Type Value
attribute NC_GLOBAL access_formats String .htmlTable,.csv,.json,.mat,.nc,.tsv
attribute NC_GLOBAL acquisition_description String The CTD was moored next to the Environmental Sample Processor (ESP) and
sampled seawater ~ every 2.5 minutes while the ESP was filtering seawater. The
ESP was located\u00a0near Station M0 (36.835 N, 121.901W).
attribute NC_GLOBAL awards_0_award_nid String 541254
attribute NC_GLOBAL awards_0_award_number String OCE-1342694
attribute NC_GLOBAL awards_0_data_url String http://www.nsf.gov/awardsearch/showAward.do?AwardNumber=1342694 (external link)
attribute NC_GLOBAL awards_0_funder_name String NSF Division of Ocean Sciences
attribute NC_GLOBAL awards_0_funding_acronym String NSF OCE
attribute NC_GLOBAL awards_0_funding_source_nid String 355
attribute NC_GLOBAL awards_0_program_manager String Dr David L. Garrison
attribute NC_GLOBAL awards_0_program_manager_nid String 50534
attribute NC_GLOBAL cdm_data_type String Other
attribute NC_GLOBAL comment String CTD Data from 2016 ESP Deployment
in Monterey Bay, CA
PI: Mary Ann Moran (University of Georgia)
Version date: 20-Feb-2019
attribute NC_GLOBAL Conventions String COARDS, CF-1.6, ACDD-1.3
attribute NC_GLOBAL creator_email String info at bco-dmo.org
attribute NC_GLOBAL creator_name String BCO-DMO
attribute NC_GLOBAL creator_type String institution
attribute NC_GLOBAL creator_url String https://www.bco-dmo.org/ (external link)
attribute NC_GLOBAL data_source String extract_data_as_tsv.pl v1.0
attribute NC_GLOBAL date_created String 2019-02-20T18:29:11Z
attribute NC_GLOBAL date_modified String 2019-04-17T17:33:10Z
attribute NC_GLOBAL defaultDataQuery String &time
attribute NC_GLOBAL doi String 10.1575/1912/bco-dmo.756376.1
attribute NC_GLOBAL geospatial_vertical_max double 7.876
attribute NC_GLOBAL geospatial_vertical_min double 3.952
attribute NC_GLOBAL geospatial_vertical_positive String down
attribute NC_GLOBAL geospatial_vertical_units String m
attribute NC_GLOBAL infoUrl String https://www.bco-dmo.org/dataset/756376 (external link)
attribute NC_GLOBAL institution String BCO-DMO
attribute NC_GLOBAL instruments_0_acronym String CTD SEACAT
attribute NC_GLOBAL instruments_0_dataset_instrument_nid String 756379
attribute NC_GLOBAL instruments_0_description String The CTD SEACAT recorder is an instrument package manufactured by Sea-Bird Electronics. The first Sea-Bird SEACAT Recorder was the original SBE 16 SEACAT developed in 1987. There are several model numbers including the SBE 16plus (SEACAT C-T Recorder (P optional))and the SBE 19 (SBE 19plus SEACAT Profiler measures conductivity, temperature, and pressure (depth)). More information from Sea-Bird Electronics.
attribute NC_GLOBAL instruments_0_instrument_external_identifier String https://vocab.nerc.ac.uk/collection/L05/current/350/ (external link)
attribute NC_GLOBAL instruments_0_instrument_name String CTD Sea-Bird SEACAT
attribute NC_GLOBAL instruments_0_instrument_nid String 479
attribute NC_GLOBAL instruments_0_supplied_name String SBE 16plus CTD
attribute NC_GLOBAL instruments_1_acronym String Fluorometer
attribute NC_GLOBAL instruments_1_dataset_instrument_nid String 756380
attribute NC_GLOBAL instruments_1_description String A fluorometer or fluorimeter is a device used to measure parameters of fluorescence: its intensity and wavelength distribution of emission spectrum after excitation by a certain spectrum of light. The instrument is designed to measure the amount of stimulated electromagnetic radiation produced by pulses of electromagnetic radiation emitted into a water sample or in situ.
attribute NC_GLOBAL instruments_1_instrument_external_identifier String https://vocab.nerc.ac.uk/collection/L05/current/113/ (external link)
attribute NC_GLOBAL instruments_1_instrument_name String Fluorometer
attribute NC_GLOBAL instruments_1_instrument_nid String 484
attribute NC_GLOBAL instruments_1_supplied_name String Turner Cyclops 7 fluorometer
attribute NC_GLOBAL keywords String bco, bco-dmo, biological, chemical, chemistry, chlorophyll, color, concentration, concentration_of_chlorophyll_in_sea_water, data, dataset, date, datetime, density, depth, dissolved, dissolved o2, Dissolved_Oxygen, dmo, earth, Earth Science > Oceans > Ocean Chemistry > Chlorophyll, Earth Science > Oceans > Ocean Chemistry > Oxygen, Earth Science > Oceans > Salinity/Density > Salinity, erddap, fraction, iso, light, Light_Transmission, local, management, metagenome, Metagenome_Sample_Name, metatranscriptome, Metatranscriptome_Sample_Name, name, O2, ocean, ocean color, oceanography, oceans, office, optical, optical properties, oxygen, practical, preliminary, properties, ribosomal, Ribosomal_16S_iTag_Sample_Name, Ribosomal_18S_iTag_Sample_Name, salinity, sample, science, sea, sea_water_practical_salinity, seawater, tag, temperature, time, transmission, volume, volume_fraction_of_oxygen_in_sea_water, water
attribute NC_GLOBAL keywords_vocabulary String GCMD Science Keywords
attribute NC_GLOBAL license String The data may be used and redistributed for free but is not intended
for legal use, since it may contain inaccuracies. Neither the data
Contributor, ERD, NOAA, nor the United States Government, nor any
of their employees or contractors, makes any warranty, express or
implied, including warranties of merchantability and fitness for a
particular purpose, or assumes any legal liability for the accuracy,
completeness, or usefulness, of this information.
attribute NC_GLOBAL metadata_source String https://www.bco-dmo.org/api/dataset/756376 (external link)
attribute NC_GLOBAL param_mapping String {'756376': {'Depth': 'master - depth'}}
attribute NC_GLOBAL parameter_source String https://www.bco-dmo.org/mapserver/dataset/756376/parameters (external link)
attribute NC_GLOBAL people_0_affiliation String University of Georgia
attribute NC_GLOBAL people_0_affiliation_acronym String UGA
attribute NC_GLOBAL people_0_person_name String Mary Ann Moran
attribute NC_GLOBAL people_0_person_nid String 51592
attribute NC_GLOBAL people_0_role String Principal Investigator
attribute NC_GLOBAL people_0_role_type String originator
attribute NC_GLOBAL people_1_affiliation String Woods Hole Oceanographic Institution
attribute NC_GLOBAL people_1_affiliation_acronym String WHOI BCO-DMO
attribute NC_GLOBAL people_1_person_name String Shannon Rauch
attribute NC_GLOBAL people_1_person_nid String 51498
attribute NC_GLOBAL people_1_role String BCO-DMO Data Manager
attribute NC_GLOBAL people_1_role_type String related
attribute NC_GLOBAL project String Bacterial Taxa that Control Sulfur Flux from the Ocean to the Atmosphere
attribute NC_GLOBAL projects_0_acronym String OceanSulfurFluxBact
attribute NC_GLOBAL projects_0_description String Surface ocean bacterioplankton preside over a divergence point in the marine sulfur cycle where the fate of dimethylsulfoniopropionate (DMSP) is determined. While it is well recognized that this juncture influences the fate of sulfur in the ocean and atmosphere, its regulation by bacterioplankton is not yet understood. Based on recent findings in biogeochemistry, bacterial physiology, bacterial genetics, and ocean instrumentation, the microbial oceanography community is poised to make major advances in knowledge of this control point. This research project is ascertaining how the major taxa of bacterial DMSP degraders in seawater regulate DMSP transformations, and addresses the implications of bacterial functional, genetic, and taxonomic diversity for global sulfur cycling.
The project is founded on the globally important function of bacterial transformation of the ubiquitous organic sulfur compound DMSP in ocean surface waters. Recent genetic discoveries have identified key genes in the two major DMSP degradation pathways, and the stage is now set to identify the factors that regulate gene expression to favor one or the other pathway during DMSP processing. The taxonomy of the bacteria mediating DMSP cycling has been deduced from genomic and metagenomic sequencing surveys to include four major groups of surface ocean bacterioplankton. How regulation of DMSP degradation differs among these groups and maps to phylogeny in co-occurring members is key information for understanding the marine sulfur cycle and predicting its function in a changing ocean. Using model organism studies, microcosm experiments (at Dauphin Island Sea Lab, AL), and time-series field studies with an autonomous sample collection instrument (at Monterey Bay, CA), this project is taking a taxon-specific approach to decipher the regulation of bacterial DMSP degradation.
This research addresses fundamental questions of how the diversity of microbial life influences the geochemical environment of the oceans and atmosphere, linking the genetic basis of metabolic potential to taxonomic diversity. The project is training graduate students and post-doctoral scholars in microbial biodiversity and providing research opportunities and mentoring for undergraduate students. An outreach program is enhance understanding of the role and diversity of marine microorganisms in global elemental cycles among high school students. Advanced Placement Biology students are participating in marine microbial research that covers key learning goals in the AP Biology curriculum. Two high school students are selected each year for summer research internships in PI laboratories.
attribute NC_GLOBAL projects_0_end_date String 2018-12
attribute NC_GLOBAL projects_0_name String Bacterial Taxa that Control Sulfur Flux from the Ocean to the Atmosphere
attribute NC_GLOBAL projects_0_project_nid String 541255
attribute NC_GLOBAL projects_0_start_date String 2014-01
attribute NC_GLOBAL publisher_name String Shannon Rauch
attribute NC_GLOBAL publisher_role String BCO-DMO Data Manager(s)
attribute NC_GLOBAL sourceUrl String (local files)
attribute NC_GLOBAL standard_name_vocabulary String CF Standard Name Table v29
attribute NC_GLOBAL summary String Environmental data from CTD during the Fall 2016 ESP deployment in Monterey Bay, CA. The CTD was moored next to the Environmental Sample Processor (ESP) and sampled seawater ~ every 2.5 minutes while the ESP was filtering seawater. The ESP was located near Station M0 (36.835 N, 121.901W).
attribute NC_GLOBAL title String Environmental data from CTD during the Fall 2016 ESP deployment in Monterey Bay, CA
attribute NC_GLOBAL version String 1
attribute NC_GLOBAL xml_source String osprey2erddap.update_xml() v1.0-alpha
variable Datetime   String  
attribute Datetime description String Date, time, and time zone
attribute Datetime ioos_category String Time
attribute Datetime long_name String Datetime
attribute Datetime units String unitless
variable ISO_DateTime_Local   String  
attribute ISO_DateTime_Local description String Date and time (local) formatted to ISO8601 standard
attribute ISO_DateTime_Local ioos_category String Time
attribute ISO_DateTime_Local long_name String ISO Date Time Local
attribute ISO_DateTime_Local source_name String ISO_DateTime_Local
attribute ISO_DateTime_Local units String unitless
variable Temperature   float  
attribute Temperature _FillValue float NaN
attribute Temperature actual_range float 13.113, 15.85
attribute Temperature description String Water temperature
attribute Temperature ioos_category String Temperature
attribute Temperature long_name String Temperature
attribute Temperature units String degrees Celsius
variable Salinity   float  
attribute Salinity _FillValue float NaN
attribute Salinity actual_range float 33.271, 33.577
attribute Salinity colorBarMaximum double 37.0
attribute Salinity colorBarMinimum double 32.0
attribute Salinity description String Water salinity
attribute Salinity ioos_category String Salinity
attribute Salinity long_name String Sea Water Practical Salinity
attribute Salinity units String psu
variable depth   double  
attribute depth _CoordinateAxisType String Height
attribute depth _CoordinateZisPositive String down
attribute depth _FillValue double NaN
attribute depth actual_range double 3.952, 7.876
attribute depth axis String Z
attribute depth colorBarMaximum double 8000.0
attribute depth colorBarMinimum double -8000.0
attribute depth colorBarPalette String TopographyDepth
attribute depth description String Sampling depth
attribute depth ioos_category String Location
attribute depth long_name String Depth
attribute depth positive String down
attribute depth standard_name String depth
attribute depth units String m
variable Dissolved_Oxygen   float  
attribute Dissolved_Oxygen _FillValue float NaN
attribute Dissolved_Oxygen actual_range float 5.22, 9.7
attribute Dissolved_Oxygen colorBarMaximum double 1.0
attribute Dissolved_Oxygen colorBarMinimum double 0.0
attribute Dissolved_Oxygen description String Dissolved oxygen concentration
attribute Dissolved_Oxygen ioos_category String Dissolved O2
attribute Dissolved_Oxygen long_name String Volume Fraction Of Oxygen In Sea Water
attribute Dissolved_Oxygen units String millilters per liter (ml/L)
variable Chlorophyll   float  
attribute Chlorophyll _FillValue float NaN
attribute Chlorophyll actual_range float 4.68, 38.05
attribute Chlorophyll colorBarMaximum double 30.0
attribute Chlorophyll colorBarMinimum double 0.03
attribute Chlorophyll colorBarScale String Log
attribute Chlorophyll description String Chlorophyll a
attribute Chlorophyll ioos_category String Ocean Color
attribute Chlorophyll long_name String Concentration Of Chlorophyll In Sea Water
attribute Chlorophyll units String micrograms per liter (ug/L)
variable Light_Transmission   float  
attribute Light_Transmission _FillValue float NaN
attribute Light_Transmission actual_range float 1.47, 91.53
attribute Light_Transmission description String Percent light transmission
attribute Light_Transmission ioos_category String Optical Properties
attribute Light_Transmission long_name String Light Transmission
attribute Light_Transmission units String unitless (percent)
variable Metagenome_Sample_Name   String  
attribute Metagenome_Sample_Name description String Metagenome Sample Name
attribute Metagenome_Sample_Name ioos_category String Unknown
attribute Metagenome_Sample_Name long_name String Metagenome Sample Name
attribute Metagenome_Sample_Name units String unitless
variable Metatranscriptome_Sample_Name   String  
attribute Metatranscriptome_Sample_Name description String Metatranscriptome Sample Name
attribute Metatranscriptome_Sample_Name ioos_category String Unknown
attribute Metatranscriptome_Sample_Name long_name String Metatranscriptome Sample Name
attribute Metatranscriptome_Sample_Name units String unitless
variable Ribosomal_16S_iTag_Sample_Name   String  
attribute Ribosomal_16S_iTag_Sample_Name description String 16S Ribosomal iTag Sample Name
attribute Ribosomal_16S_iTag_Sample_Name ioos_category String Unknown
attribute Ribosomal_16S_iTag_Sample_Name long_name String Ribosomal 16 S I Tag Sample Name
attribute Ribosomal_16S_iTag_Sample_Name units String unitless
variable Ribosomal_18S_iTag_Sample_Name   String  
attribute Ribosomal_18S_iTag_Sample_Name description String 18S Ribosomal iTag Sample Name
attribute Ribosomal_18S_iTag_Sample_Name ioos_category String Unknown
attribute Ribosomal_18S_iTag_Sample_Name long_name String Ribosomal 18 S I Tag Sample Name
attribute Ribosomal_18S_iTag_Sample_Name units String unitless

The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.


 
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