ERDDAP > info > bcodmo_dataset_756376

Grid DAP Data	Sub- set	Table DAP Data	Make A Graph	W M S	Source Data Files	Acces- sible	Title	Sum- mary	FGDC, ISO, Metadata	Back- ground Info	RSS	E mail	Institution	Dataset ID
		data	graph		files	public	[CTD 2016] - Environmental data from CTD during the Fall 2016 ESP deployment in Monterey Bay, CA (Bacterial Taxa that Control Sulfur Flux from the Ocean to the Atmosphere)		I   M	background			BCO-DMO	bcodmo_dataset_756376

The Dataset's Variables and Attributes

Row Type	Variable Name	Attribute Name	Data Type	Value
attribute	NC_GLOBAL	access_formats	String	.htmlTable,.csv,.json,.mat,.nc,.tsv
attribute	NC_GLOBAL	acquisition_description	String	The CTD was moored next to the Environmental Sample Processor (ESP) and sampled seawater ~ every 2.5 minutes while the ESP was filtering seawater. The ESP was located\u00a0near Station M0 (36.835 N, 121.901W).
attribute	NC_GLOBAL	awards_0_award_nid	String	541254
attribute	NC_GLOBAL	awards_0_award_number	String	OCE-1342694
attribute	NC_GLOBAL	awards_0_data_url	String	http://www.nsf.gov/awardsearch/showAward.do?AwardNumber=1342694
attribute	NC_GLOBAL	awards_0_funder_name	String	NSF Division of Ocean Sciences
attribute	NC_GLOBAL	awards_0_funding_acronym	String	NSF OCE
attribute	NC_GLOBAL	awards_0_funding_source_nid	String	355
attribute	NC_GLOBAL	awards_0_program_manager	String	David L. Garrison
attribute	NC_GLOBAL	awards_0_program_manager_nid	String	50534
attribute	NC_GLOBAL	cdm_data_type	String	Other
attribute	NC_GLOBAL	comment	String	CTD Data from 2016 ESP Deployment in Monterey Bay, CA PI: Mary Ann Moran (University of Georgia) Version date: 20-Feb-2019
attribute	NC_GLOBAL	Conventions	String	COARDS, CF-1.6, ACDD-1.3
attribute	NC_GLOBAL	creator_email	String	info at bco-dmo.org
attribute	NC_GLOBAL	creator_name	String	BCO-DMO
attribute	NC_GLOBAL	creator_type	String	institution
attribute	NC_GLOBAL	creator_url	String	https://www.bco-dmo.org/
attribute	NC_GLOBAL	data_source	String	extract_data_as_tsv version 2.3 19 Dec 2019
attribute	NC_GLOBAL	date_created	String	2019-02-20T18:29:11Z
attribute	NC_GLOBAL	date_modified	String	2019-04-17T17:33:10Z
attribute	NC_GLOBAL	defaultDataQuery	String	&time<now
attribute	NC_GLOBAL	doi	String	10.1575/1912/bco-dmo.756376.1
attribute	NC_GLOBAL	geospatial_vertical_max	double	7.876
attribute	NC_GLOBAL	geospatial_vertical_min	double	3.952
attribute	NC_GLOBAL	geospatial_vertical_positive	String	down
attribute	NC_GLOBAL	geospatial_vertical_units	String	m
attribute	NC_GLOBAL	infoUrl	String	https://www.bco-dmo.org/dataset/756376
attribute	NC_GLOBAL	institution	String	BCO-DMO
attribute	NC_GLOBAL	instruments_0_acronym	String	CTD SEACAT
attribute	NC_GLOBAL	instruments_0_dataset_instrument_nid	String	756379
attribute	NC_GLOBAL	instruments_0_description	String	The CTD SEACAT recorder is an instrument package manufactured by Sea-Bird Electronics. The first Sea-Bird SEACAT Recorder was the original SBE 16 SEACAT developed in 1987. There are several model numbers including the SBE 16plus (SEACAT C-T Recorder (P optional))and the SBE 19 (SBE 19plus SEACAT Profiler measures conductivity, temperature, and pressure (depth)). More information from Sea-Bird Electronics.
attribute	NC_GLOBAL	instruments_0_instrument_external_identifier	String	https://vocab.nerc.ac.uk/collection/L05/current/350/
attribute	NC_GLOBAL	instruments_0_instrument_name	String	CTD Sea-Bird SEACAT
attribute	NC_GLOBAL	instruments_0_instrument_nid	String	479
attribute	NC_GLOBAL	instruments_0_supplied_name	String	SBE 16plus CTD
attribute	NC_GLOBAL	instruments_1_acronym	String	Fluorometer
attribute	NC_GLOBAL	instruments_1_dataset_instrument_nid	String	756380
attribute	NC_GLOBAL	instruments_1_description	String	A fluorometer or fluorimeter is a device used to measure parameters of fluorescence: its intensity and wavelength distribution of emission spectrum after excitation by a certain spectrum of light. The instrument is designed to measure the amount of stimulated electromagnetic radiation produced by pulses of electromagnetic radiation emitted into a water sample or in situ.
attribute	NC_GLOBAL	instruments_1_instrument_external_identifier	String	https://vocab.nerc.ac.uk/collection/L05/current/113/
attribute	NC_GLOBAL	instruments_1_instrument_name	String	Fluorometer
attribute	NC_GLOBAL	instruments_1_instrument_nid	String	484
attribute	NC_GLOBAL	instruments_1_supplied_name	String	Turner Cyclops 7 fluorometer
attribute	NC_GLOBAL	keywords	String	bco, bco-dmo, biological, chemical, chemistry, chlorophyll, concentration, concentration_of_chlorophyll_in_sea_water, data, dataset, date, datetime, density, depth, Dissolved_Oxygen, dmo, earth, Earth Science > Oceans > Ocean Chemistry > Chlorophyll, Earth Science > Oceans > Ocean Chemistry > Oxygen, Earth Science > Oceans > Salinity/Density > Salinity, erddap, fraction, iso, light, Light_Transmission, local, management, metagenome, Metagenome_Sample_Name, metatranscriptome, Metatranscriptome_Sample_Name, name, O2, ocean, oceanography, oceans, office, oxygen, practical, preliminary, ribosomal, Ribosomal_16S_iTag_Sample_Name, Ribosomal_18S_iTag_Sample_Name, salinity, sample, science, sea, sea_water_practical_salinity, seawater, tag, temperature, time, transmission, volume, volume_fraction_of_oxygen_in_sea_water, water
attribute	NC_GLOBAL	keywords_vocabulary	String	GCMD Science Keywords
attribute	NC_GLOBAL	license	String	https://www.bco-dmo.org/dataset/756376/license
attribute	NC_GLOBAL	metadata_source	String	https://www.bco-dmo.org/api/dataset/756376
attribute	NC_GLOBAL	param_mapping	String	{'756376': {'Depth': 'master - depth', 'ISO_DateTime_Local': 'flag - time'}}
attribute	NC_GLOBAL	parameter_source	String	https://www.bco-dmo.org/mapserver/dataset/756376/parameters
attribute	NC_GLOBAL	people_0_affiliation	String	University of Georgia
attribute	NC_GLOBAL	people_0_affiliation_acronym	String	UGA
attribute	NC_GLOBAL	people_0_person_name	String	Mary Ann Moran
attribute	NC_GLOBAL	people_0_person_nid	String	51592
attribute	NC_GLOBAL	people_0_role	String	Principal Investigator
attribute	NC_GLOBAL	people_0_role_type	String	originator
attribute	NC_GLOBAL	people_1_affiliation	String	Woods Hole Oceanographic Institution
attribute	NC_GLOBAL	people_1_affiliation_acronym	String	WHOI BCO-DMO
attribute	NC_GLOBAL	people_1_person_name	String	Shannon Rauch
attribute	NC_GLOBAL	people_1_person_nid	String	51498
attribute	NC_GLOBAL	people_1_role	String	BCO-DMO Data Manager
attribute	NC_GLOBAL	people_1_role_type	String	related
attribute	NC_GLOBAL	project	String	OceanSulfurFluxBact
attribute	NC_GLOBAL	projects_0_acronym	String	OceanSulfurFluxBact
attribute	NC_GLOBAL	projects_0_description	String	Surface ocean bacterioplankton preside over a divergence point in the marine sulfur cycle where the fate of dimethylsulfoniopropionate (DMSP) is determined. While it is well recognized that this juncture influences the fate of sulfur in the ocean and atmosphere, its regulation by bacterioplankton is not yet understood. Based on recent findings in biogeochemistry, bacterial physiology, bacterial genetics, and ocean instrumentation, the microbial oceanography community is poised to make major advances in knowledge of this control point. This research project is ascertaining how the major taxa of bacterial DMSP degraders in seawater regulate DMSP transformations, and addresses the implications of bacterial functional, genetic, and taxonomic diversity for global sulfur cycling. The project is founded on the globally important function of bacterial transformation of the ubiquitous organic sulfur compound DMSP in ocean surface waters. Recent genetic discoveries have identified key genes in the two major DMSP degradation pathways, and the stage is now set to identify the factors that regulate gene expression to favor one or the other pathway during DMSP processing. The taxonomy of the bacteria mediating DMSP cycling has been deduced from genomic and metagenomic sequencing surveys to include four major groups of surface ocean bacterioplankton. How regulation of DMSP degradation differs among these groups and maps to phylogeny in co-occurring members is key information for understanding the marine sulfur cycle and predicting its function in a changing ocean. Using model organism studies, microcosm experiments (at Dauphin Island Sea Lab, AL), and time-series field studies with an autonomous sample collection instrument (at Monterey Bay, CA), this project is taking a taxon-specific approach to decipher the regulation of bacterial DMSP degradation. This research addresses fundamental questions of how the diversity of microbial life influences the geochemical environment of the oceans and atmosphere, linking the genetic basis of metabolic potential to taxonomic diversity. The project is training graduate students and post-doctoral scholars in microbial biodiversity and providing research opportunities and mentoring for undergraduate students. An outreach program is enhance understanding of the role and diversity of marine microorganisms in global elemental cycles among high school students. Advanced Placement Biology students are participating in marine microbial research that covers key learning goals in the AP Biology curriculum. Two high school students are selected each year for summer research internships in PI laboratories.
attribute	NC_GLOBAL	projects_0_end_date	String	2018-12
attribute	NC_GLOBAL	projects_0_name	String	Bacterial Taxa that Control Sulfur Flux from the Ocean to the Atmosphere
attribute	NC_GLOBAL	projects_0_project_nid	String	541255
attribute	NC_GLOBAL	projects_0_start_date	String	2014-01
attribute	NC_GLOBAL	publisher_name	String	Biological and Chemical Oceanographic Data Management Office (BCO-DMO)
attribute	NC_GLOBAL	publisher_type	String	institution
attribute	NC_GLOBAL	sourceUrl	String	(local files)
attribute	NC_GLOBAL	standard_name_vocabulary	String	CF Standard Name Table v55
attribute	NC_GLOBAL	summary	String	Environmental data from CTD during the Fall 2016 ESP deployment in Monterey Bay, CA. The CTD was moored next to the Environmental Sample Processor (ESP) and sampled seawater ~ every 2.5 minutes while the ESP was filtering seawater. The ESP was located near Station M0 (36.835 N, 121.901W).
attribute	NC_GLOBAL	time_coverage_end	String	2016-11-16T11:06:00Z
attribute	NC_GLOBAL	time_coverage_start	String	2016-09-26T12:12:53Z
attribute	NC_GLOBAL	title	String	[CTD 2016] - Environmental data from CTD during the Fall 2016 ESP deployment in Monterey Bay, CA (Bacterial Taxa that Control Sulfur Flux from the Ocean to the Atmosphere)
attribute	NC_GLOBAL	version	String	1
attribute	NC_GLOBAL	xml_source	String	osprey2erddap.update_xml() v1.3
variable	Datetime		String
attribute	Datetime	bcodmo_name	String	date
attribute	Datetime	description	String	Date, time, and time zone
attribute	Datetime	long_name	String	Datetime
attribute	Datetime	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P01/current/ADATAA01/
attribute	Datetime	units	String	unitless
variable	time		double
attribute	time	_CoordinateAxisType	String	Time
attribute	time	actual_range	double	1.474891973E9, 1.47929436E9
attribute	time	axis	String	T
attribute	time	bcodmo_name	String	ISO_DateTime_Local
attribute	time	description	String	Date and time (local) formatted to ISO8601 standard
attribute	time	ioos_category	String	Time
attribute	time	long_name	String	ISO Date Time Local
attribute	time	source_name	String	ISO_DateTime_Local
attribute	time	standard_name	String	time
attribute	time	time_origin	String	01-JAN-1970 00:00:00
attribute	time	time_precision	String	1970-01-01T00:00:00Z
attribute	time	units	String	seconds since 1970-01-01T00:00:00Z
variable	Temperature		float
attribute	Temperature	_FillValue	float	NaN
attribute	Temperature	actual_range	float	13.113, 15.85
attribute	Temperature	bcodmo_name	String	temperature
attribute	Temperature	description	String	Water temperature
attribute	Temperature	long_name	String	Temperature
attribute	Temperature	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P01/current/TEMPP901/
attribute	Temperature	units	String	degrees Celsius
variable	Salinity		float
attribute	Salinity	_FillValue	float	NaN
attribute	Salinity	actual_range	float	33.271, 33.577
attribute	Salinity	bcodmo_name	String	sal
attribute	Salinity	colorBarMaximum	double	37.0
attribute	Salinity	colorBarMinimum	double	32.0
attribute	Salinity	description	String	Water salinity
attribute	Salinity	long_name	String	Sea Water Practical Salinity
attribute	Salinity	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P01/current/PSALST01/
attribute	Salinity	units	String	psu
variable	depth		double
attribute	depth	_CoordinateAxisType	String	Height
attribute	depth	_CoordinateZisPositive	String	down
attribute	depth	_FillValue	double	NaN
attribute	depth	actual_range	double	3.952, 7.876
attribute	depth	axis	String	Z
attribute	depth	bcodmo_name	String	depth
attribute	depth	colorBarMaximum	double	8000.0
attribute	depth	colorBarMinimum	double	-8000.0
attribute	depth	colorBarPalette	String	TopographyDepth
attribute	depth	description	String	Sampling depth
attribute	depth	ioos_category	String	Location
attribute	depth	long_name	String	Depth
attribute	depth	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P09/current/DEPH/
attribute	depth	positive	String	down
attribute	depth	standard_name	String	depth
attribute	depth	units	String	m
variable	Dissolved_Oxygen		float
attribute	Dissolved_Oxygen	_FillValue	float	NaN
attribute	Dissolved_Oxygen	actual_range	float	5.22, 9.7
attribute	Dissolved_Oxygen	bcodmo_name	String	dissolved Oxygen
attribute	Dissolved_Oxygen	colorBarMaximum	double	1.0
attribute	Dissolved_Oxygen	colorBarMinimum	double	0.0
attribute	Dissolved_Oxygen	description	String	Dissolved oxygen concentration
attribute	Dissolved_Oxygen	long_name	String	Volume Fraction Of Oxygen In Sea Water
attribute	Dissolved_Oxygen	units	String	millilters per liter (ml/L)
variable	Chlorophyll		float
attribute	Chlorophyll	_FillValue	float	NaN
attribute	Chlorophyll	actual_range	float	4.68, 38.05
attribute	Chlorophyll	bcodmo_name	String	chlorophyll a
attribute	Chlorophyll	colorBarMaximum	double	30.0
attribute	Chlorophyll	colorBarMinimum	double	0.03
attribute	Chlorophyll	colorBarScale	String	Log
attribute	Chlorophyll	description	String	Chlorophyll a
attribute	Chlorophyll	long_name	String	Concentration Of Chlorophyll In Sea Water
attribute	Chlorophyll	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P01/current/CPHLHPP1/
attribute	Chlorophyll	units	String	micrograms per liter (ug/L)
variable	Light_Transmission		float
attribute	Light_Transmission	_FillValue	float	NaN
attribute	Light_Transmission	actual_range	float	1.47, 91.53
attribute	Light_Transmission	bcodmo_name	String	transmission
attribute	Light_Transmission	description	String	Percent light transmission
attribute	Light_Transmission	long_name	String	Light Transmission
attribute	Light_Transmission	units	String	unitless (percent)
variable	Metagenome_Sample_Name		String
attribute	Metagenome_Sample_Name	bcodmo_name	String	sample
attribute	Metagenome_Sample_Name	description	String	Metagenome Sample Name
attribute	Metagenome_Sample_Name	long_name	String	Metagenome Sample Name
attribute	Metagenome_Sample_Name	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P02/current/ACYC/
attribute	Metagenome_Sample_Name	units	String	unitless
variable	Metatranscriptome_Sample_Name		String
attribute	Metatranscriptome_Sample_Name	bcodmo_name	String	sample
attribute	Metatranscriptome_Sample_Name	description	String	Metatranscriptome Sample Name
attribute	Metatranscriptome_Sample_Name	long_name	String	Metatranscriptome Sample Name
attribute	Metatranscriptome_Sample_Name	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P02/current/ACYC/
attribute	Metatranscriptome_Sample_Name	units	String	unitless
variable	Ribosomal_16S_iTag_Sample_Name		String
attribute	Ribosomal_16S_iTag_Sample_Name	bcodmo_name	String	sample
attribute	Ribosomal_16S_iTag_Sample_Name	description	String	16S Ribosomal iTag Sample Name
attribute	Ribosomal_16S_iTag_Sample_Name	long_name	String	Ribosomal 16 S I Tag Sample Name
attribute	Ribosomal_16S_iTag_Sample_Name	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P02/current/ACYC/
attribute	Ribosomal_16S_iTag_Sample_Name	units	String	unitless
variable	Ribosomal_18S_iTag_Sample_Name		String
attribute	Ribosomal_18S_iTag_Sample_Name	bcodmo_name	String	sample
attribute	Ribosomal_18S_iTag_Sample_Name	description	String	18S Ribosomal iTag Sample Name
attribute	Ribosomal_18S_iTag_Sample_Name	long_name	String	Ribosomal 18 S I Tag Sample Name
attribute	Ribosomal_18S_iTag_Sample_Name	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P02/current/ACYC/
attribute	Ribosomal_18S_iTag_Sample_Name	units	String	unitless

The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.