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     data   graph     files  public [Ross Sea metaproteome peptide spectral counts] - Ross Sea metaproteome peptide spectral
counts searched against Phaeocystis strain transcriptome from net tows during RVIB Nathaniel
B. Palmer cruise NBP0601 in December of 2015 (Controls of Ross Sea Algal Community Structure)
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The Dataset's Variables and Attributes

Row Type Variable Name Attribute Name Data Type Value
attribute NC_GLOBAL cdm_data_type String Other
attribute NC_GLOBAL Conventions String COARDS, CF-1.6, ACDD-1.3
attribute NC_GLOBAL creator_email String info at bco-dmo.org
attribute NC_GLOBAL creator_name String BCO-DMO
attribute NC_GLOBAL creator_url String https://www.bco-dmo.org/ (external link)
attribute NC_GLOBAL doi String 10.26008/1912/bco-dmo.768259.2
attribute NC_GLOBAL Easternmost_Easting double 170.76
attribute NC_GLOBAL geospatial_lon_max double 170.76
attribute NC_GLOBAL geospatial_lon_min double 170.76
attribute NC_GLOBAL geospatial_lon_units String degrees_east
attribute NC_GLOBAL geospatial_vertical_max double 5.0
attribute NC_GLOBAL geospatial_vertical_min double 5.0
attribute NC_GLOBAL geospatial_vertical_positive String down
attribute NC_GLOBAL geospatial_vertical_units String m
attribute NC_GLOBAL infoUrl String https://www.bco-dmo.org/dataset/768259 (external link)
attribute NC_GLOBAL institution String BCO-DMO
attribute NC_GLOBAL license String The data may be used and redistributed for free but is not intended
for legal use, since it may contain inaccuracies. Neither the data
Contributor, ERD, NOAA, nor the United States Government, nor any
of their employees or contractors, makes any warranty, express or
implied, including warranties of merchantability and fitness for a
particular purpose, or assumes any legal liability for the accuracy,
completeness, or usefulness, of this information.
attribute NC_GLOBAL sourceUrl String (local files)
attribute NC_GLOBAL summary String A net tow metaproteome of a Phaeocystis antarctica bloom in the Ross Sea, mapped here to Phaeocystis metatranscriptomes analyzed by 2D LCMS, in units of peptide spectral counts.
attribute NC_GLOBAL time_coverage_end String 2005-12-29T11:58:00Z
attribute NC_GLOBAL time_coverage_start String 2005-12-29T11:58:00Z
attribute NC_GLOBAL title String [Ross Sea metaproteome peptide spectral counts] - Ross Sea metaproteome peptide spectral counts searched against Phaeocystis strain transcriptome from net tows during RVIB Nathaniel B. Palmer cruise NBP0601 in December of 2015 (Controls of Ross Sea Algal Community Structure)
attribute NC_GLOBAL Westernmost_Easting double 170.76
variable sample_id   String  
attribute sample_id long_name String Sample_id
attribute sample_id units String unitless
variable cruise_id   String  
attribute cruise_id long_name String Cruise_id
attribute cruise_id units String unitless
variable station_id   int  
attribute station_id actual_range int 137, 137
attribute station_id long_name String Station_id
attribute station_id units String unitless
variable latitude_dd   float  
attribute latitude_dd actual_range float -76.82, -76.82
attribute latitude_dd long_name String Latitude_dd
attribute latitude_dd units String degrees_north
variable longitude   float  
attribute longitude _CoordinateAxisType String Lon
attribute longitude actual_range float 170.76, 170.76
attribute longitude axis String X
attribute longitude ioos_category String Location
attribute longitude long_name String Longitude_dd
attribute longitude standard_name String longitude
attribute longitude units String degrees_east
variable depth   int  
attribute depth _CoordinateAxisType String Height
attribute depth _CoordinateZisPositive String down
attribute depth actual_range int 5, 5
attribute depth axis String Z
attribute depth ioos_category String Location
attribute depth long_name String Depth_m
attribute depth positive String down
attribute depth standard_name String depth
attribute depth units String m
variable date_local   String  
attribute date_local long_name String Date_local
attribute date_local units String unitless
variable time_local   String  
attribute time_local long_name String Time_local
attribute time_local units String unitless
variable minimum_filter_size_microns   int  
attribute minimum_filter_size_microns actual_range int 20, 20
attribute minimum_filter_size_microns long_name String Minimum_filter_size_microns
attribute minimum_filter_size_microns units String microns (um)
variable maximum_filter_size_microns   String  
attribute maximum_filter_size_microns long_name String Maximum_filter_size_microns
attribute maximum_filter_size_microns units String microns (um)
variable peptide_sequence   String  
attribute peptide_sequence long_name String Peptide_sequence
attribute peptide_sequence units String unitless
variable peptide_start_index   int  
attribute peptide_start_index actual_range int 0, 1458
attribute peptide_start_index long_name String Peptide_start_index
attribute peptide_start_index units String unitless
variable peptide_stop_index   int  
attribute peptide_stop_index actual_range int 0, 1474
attribute peptide_stop_index long_name String Peptide_stop_index
attribute peptide_stop_index units String unitless
variable protein_molecular_weight_kDa   float  
attribute protein_molecular_weight_kDa actual_range float 0.0, 163516.0
attribute protein_molecular_weight_kDa long_name String Protein_molecular_weight_kda
attribute protein_molecular_weight_kDa units String kilo-Daltons (kDa)
variable protein_id   String  
attribute protein_id long_name String Protein_id
attribute protein_id units String unitless
variable spectral_count_sum   int  
attribute spectral_count_sum actual_range int 0, 66
attribute spectral_count_sum long_name String Spectral_count_sum
attribute spectral_count_sum units String unitless
variable other_protein_ids   String  
attribute other_protein_ids long_name String Other_protein_ids
attribute other_protein_ids units String unitless
variable best_protein_id_probability   float  
attribute best_protein_id_probability actual_range float 0.945, 0.997
attribute best_protein_id_probability long_name String Best_protein_id_probability
attribute best_protein_id_probability units String unitless
variable best_sequest_DCn_score   float  
attribute best_sequest_DCn_score actual_range float 0.2, 0.96
attribute best_sequest_DCn_score long_name String Best_sequest_dcn_score
attribute best_sequest_DCn_score units String unitless
variable best_sequest_Xcorr_score   float  
attribute best_sequest_Xcorr_score actual_range float 2.5, 8.61
attribute best_sequest_Xcorr_score long_name String Best_sequest_xcorr_score
attribute best_sequest_Xcorr_score units String unitless
variable plus2H_spectra_count   int  
attribute plus2H_spectra_count actual_range int 0, 47
attribute plus2H_spectra_count long_name String Plus2h_spectra_count
attribute plus2H_spectra_count units String unitless
variable plus3H_spectra_count   int  
attribute plus3H_spectra_count actual_range int 0, 48
attribute plus3H_spectra_count long_name String Plus3h_spectra_count
attribute plus3H_spectra_count units String unitless
variable plus4H_spectra_count   int  
attribute plus4H_spectra_count actual_range int 0, 17
attribute plus4H_spectra_count long_name String Plus4h_spectra_count
attribute plus4H_spectra_count units String unitless
variable median_retention_time   String  
attribute median_retention_time long_name String Median_retention_time
attribute median_retention_time units String unitless
variable total_precursor_intensity   String  
attribute total_precursor_intensity long_name String Total_precursor_intensity
attribute total_precursor_intensity units String unitless
variable TIC   String  
attribute TIC long_name String Tic
attribute TIC units String unitless
variable absolute_units_fmol_L   float  
attribute absolute_units_fmol_L long_name String Absolute_units_fmol_l
attribute absolute_units_fmol_L units String femtomoles per liter (fmol/L)
variable time   double  
attribute time _CoordinateAxisType String Time
attribute time actual_range double 1.13585748E9, 1.13585748E9
attribute time axis String T
attribute time ioos_category String Time
attribute time long_name String Iso_datetime_utc
attribute time standard_name String time
attribute time time_origin String 01-JAN-1970 00:00:00
attribute time units String seconds since 1970-01-01T00:00:00Z

The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.


 
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