bcodmo_dataset_768259_v2

Name: [Ross Sea metaproteome peptide spectral counts] - Ross Sea metaproteome peptide spectral counts searched against Phaeocystis strain transcriptome from net tows during RVIB Nathaniel B. Palmer cruise NBP0601 in December of 2015 (Controls of Ross Sea Algal Community Structure)
Creator: BCO-DMO
License: The data may be used and redistributed for free but is not intended for legal use, since it may contain inaccuracies. Neither the data Contributor, ERD, NOAA, nor the United States Government, nor any of their employees or contractors, makes any warranty, express or implied, including warranties of merchantability and fitness for a particular purpose, or assumes any legal liability for the accuracy, completeness, or usefulness, of this information.

Grid DAP Data	Sub- set	Table DAP Data	Make A Graph	W M S	Source Data Files	Acces- sible	Title	Sum- mary	FGDC, ISO, Metadata	Back- ground Info	RSS	E mail	Institution	Dataset ID
		data	graph		files	public	[Ross Sea metaproteome peptide spectral counts] - Ross Sea metaproteome peptide spectral counts searched against Phaeocystis strain transcriptome from net tows during RVIB Nathaniel B. Palmer cruise NBP0601 in December of 2015 (Controls of Ross Sea Algal Community Structure)		M	background			BCO-DMO	bcodmo_dataset_768259_v2

The Dataset's Variables and Attributes

Row Type	Variable Name	Attribute Name	Data Type	Value
attribute	NC_GLOBAL	cdm_data_type	String	Other
attribute	NC_GLOBAL	Conventions	String	COARDS, CF-1.6, ACDD-1.3
attribute	NC_GLOBAL	creator_email	String	info at bco-dmo.org
attribute	NC_GLOBAL	creator_name	String	BCO-DMO
attribute	NC_GLOBAL	creator_url	String	https://www.bco-dmo.org/
attribute	NC_GLOBAL	doi	String	10.26008/1912/bco-dmo.768259.2
attribute	NC_GLOBAL	Easternmost_Easting	double	170.76
attribute	NC_GLOBAL	geospatial_lon_max	double	170.76
attribute	NC_GLOBAL	geospatial_lon_min	double	170.76
attribute	NC_GLOBAL	geospatial_lon_units	String	degrees_east
attribute	NC_GLOBAL	geospatial_vertical_max	double	5.0
attribute	NC_GLOBAL	geospatial_vertical_min	double	5.0
attribute	NC_GLOBAL	geospatial_vertical_positive	String	down
attribute	NC_GLOBAL	geospatial_vertical_units	String	m
attribute	NC_GLOBAL	infoUrl	String	https://www.bco-dmo.org/dataset/768259
attribute	NC_GLOBAL	institution	String	BCO-DMO
attribute	NC_GLOBAL	license	String	The data may be used and redistributed for free but is not intended for legal use, since it may contain inaccuracies. Neither the data Contributor, ERD, NOAA, nor the United States Government, nor any of their employees or contractors, makes any warranty, express or implied, including warranties of merchantability and fitness for a particular purpose, or assumes any legal liability for the accuracy, completeness, or usefulness, of this information.
attribute	NC_GLOBAL	sourceUrl	String	(local files)
attribute	NC_GLOBAL	summary	String	A net tow metaproteome of a Phaeocystis antarctica bloom in the Ross Sea, mapped here to Phaeocystis metatranscriptomes analyzed by 2D LCMS, in units of peptide spectral counts.
attribute	NC_GLOBAL	time_coverage_end	String	2005-12-29T11:58:00Z
attribute	NC_GLOBAL	time_coverage_start	String	2005-12-29T11:58:00Z
attribute	NC_GLOBAL	title	String	[Ross Sea metaproteome peptide spectral counts] - Ross Sea metaproteome peptide spectral counts searched against Phaeocystis strain transcriptome from net tows during RVIB Nathaniel B. Palmer cruise NBP0601 in December of 2015 (Controls of Ross Sea Algal Community Structure)
attribute	NC_GLOBAL	Westernmost_Easting	double	170.76
variable	sample_id		String
attribute	sample_id	long_name	String	Sample_id
attribute	sample_id	units	String	unitless
variable	cruise_id		String
attribute	cruise_id	long_name	String	Cruise_id
attribute	cruise_id	units	String	unitless
variable	station_id		int
attribute	station_id	actual_range	int	137, 137
attribute	station_id	long_name	String	Station_id
attribute	station_id	units	String	unitless
variable	latitude_dd		float
attribute	latitude_dd	actual_range	float	-76.82, -76.82
attribute	latitude_dd	long_name	String	Latitude_dd
attribute	latitude_dd	units	String	degrees_north
variable	longitude		float
attribute	longitude	_CoordinateAxisType	String	Lon
attribute	longitude	actual_range	float	170.76, 170.76
attribute	longitude	axis	String	X
attribute	longitude	ioos_category	String	Location
attribute	longitude	long_name	String	Longitude_dd
attribute	longitude	standard_name	String	longitude
attribute	longitude	units	String	degrees_east
variable	depth		int
attribute	depth	_CoordinateAxisType	String	Height
attribute	depth	_CoordinateZisPositive	String	down
attribute	depth	actual_range	int	5, 5
attribute	depth	axis	String	Z
attribute	depth	ioos_category	String	Location
attribute	depth	long_name	String	Depth_m
attribute	depth	positive	String	down
attribute	depth	standard_name	String	depth
attribute	depth	units	String	m
variable	date_local		String
attribute	date_local	long_name	String	Date_local
attribute	date_local	units	String	unitless
variable	time_local		String
attribute	time_local	long_name	String	Time_local
attribute	time_local	units	String	unitless
variable	minimum_filter_size_microns		int
attribute	minimum_filter_size_microns	actual_range	int	20, 20
attribute	minimum_filter_size_microns	long_name	String	Minimum_filter_size_microns
attribute	minimum_filter_size_microns	units	String	microns (um)
variable	maximum_filter_size_microns		String
attribute	maximum_filter_size_microns	long_name	String	Maximum_filter_size_microns
attribute	maximum_filter_size_microns	units	String	microns (um)
variable	peptide_sequence		String
attribute	peptide_sequence	long_name	String	Peptide_sequence
attribute	peptide_sequence	units	String	unitless
variable	peptide_start_index		int
attribute	peptide_start_index	actual_range	int	0, 1458
attribute	peptide_start_index	long_name	String	Peptide_start_index
attribute	peptide_start_index	units	String	unitless
variable	peptide_stop_index		int
attribute	peptide_stop_index	actual_range	int	0, 1474
attribute	peptide_stop_index	long_name	String	Peptide_stop_index
attribute	peptide_stop_index	units	String	unitless
variable	protein_molecular_weight_kDa		float
attribute	protein_molecular_weight_kDa	actual_range	float	0.0, 163516.0
attribute	protein_molecular_weight_kDa	long_name	String	Protein_molecular_weight_kda
attribute	protein_molecular_weight_kDa	units	String	kilo-Daltons (kDa)
variable	protein_id		String
attribute	protein_id	long_name	String	Protein_id
attribute	protein_id	units	String	unitless
variable	spectral_count_sum		int
attribute	spectral_count_sum	actual_range	int	0, 66
attribute	spectral_count_sum	long_name	String	Spectral_count_sum
attribute	spectral_count_sum	units	String	unitless
variable	other_protein_ids		String
attribute	other_protein_ids	long_name	String	Other_protein_ids
attribute	other_protein_ids	units	String	unitless
variable	best_protein_id_probability		float
attribute	best_protein_id_probability	actual_range	float	0.945, 0.997
attribute	best_protein_id_probability	long_name	String	Best_protein_id_probability
attribute	best_protein_id_probability	units	String	unitless
variable	best_sequest_DCn_score		float
attribute	best_sequest_DCn_score	actual_range	float	0.2, 0.96
attribute	best_sequest_DCn_score	long_name	String	Best_sequest_dcn_score
attribute	best_sequest_DCn_score	units	String	unitless
variable	best_sequest_Xcorr_score		float
attribute	best_sequest_Xcorr_score	actual_range	float	2.5, 8.61
attribute	best_sequest_Xcorr_score	long_name	String	Best_sequest_xcorr_score
attribute	best_sequest_Xcorr_score	units	String	unitless
variable	plus2H_spectra_count		int
attribute	plus2H_spectra_count	actual_range	int	0, 47
attribute	plus2H_spectra_count	long_name	String	Plus2h_spectra_count
attribute	plus2H_spectra_count	units	String	unitless
variable	plus3H_spectra_count		int
attribute	plus3H_spectra_count	actual_range	int	0, 48
attribute	plus3H_spectra_count	long_name	String	Plus3h_spectra_count
attribute	plus3H_spectra_count	units	String	unitless
variable	plus4H_spectra_count		int
attribute	plus4H_spectra_count	actual_range	int	0, 17
attribute	plus4H_spectra_count	long_name	String	Plus4h_spectra_count
attribute	plus4H_spectra_count	units	String	unitless
variable	median_retention_time		String
attribute	median_retention_time	long_name	String	Median_retention_time
attribute	median_retention_time	units	String	unitless
variable	total_precursor_intensity		String
attribute	total_precursor_intensity	long_name	String	Total_precursor_intensity
attribute	total_precursor_intensity	units	String	unitless
variable	TIC		String
attribute	TIC	long_name	String	Tic
attribute	TIC	units	String	unitless
variable	absolute_units_fmol_L		float
attribute	absolute_units_fmol_L	long_name	String	Absolute_units_fmol_l
attribute	absolute_units_fmol_L	units	String	femtomoles per liter (fmol/L)
variable	time		double
attribute	time	_CoordinateAxisType	String	Time
attribute	time	actual_range	double	1.13585748E9, 1.13585748E9
attribute	time	axis	String	T
attribute	time	ioos_category	String	Time
attribute	time	long_name	String	Iso_datetime_utc
attribute	time	standard_name	String	time
attribute	time	time_origin	String	01-JAN-1970 00:00:00
attribute	time	units	String	seconds since 1970-01-01T00:00:00Z

The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.