ERDDAP > info > bcodmo_dataset_778703

Grid DAP Data	Sub- set	Table DAP Data	Make A Graph	W M S	Source Data Files	Acces- sible	Title	Sum- mary	ISO, Metadata	Back- ground Info	RSS	E mail	Institution	Dataset ID
	set	data	graph		files	public	Modeling bio-energetics for South Pacific Gyre marine sediment at site U1370		I   M	background			BCO-DMO	bcodmo_dataset_778703

The Dataset's Variables and Attributes

Row Type	Variable Name	Attribute Name	Data Type	Value
attribute	NC_GLOBAL	access_formats	String	.htmlTable,.csv,.json,.mat,.nc,.tsv,.esriCsv,.geoJson
attribute	NC_GLOBAL	acquisition_description	String	""
attribute	NC_GLOBAL	awards_0_award_nid	String	554980
attribute	NC_GLOBAL	awards_0_award_number	String	OCE-0939564
attribute	NC_GLOBAL	awards_0_data_url	String	http://www.nsf.gov/awardsearch/showAward?AWD_ID=0939564
attribute	NC_GLOBAL	awards_0_funder_name	String	NSF Division of Ocean Sciences
attribute	NC_GLOBAL	awards_0_funding_acronym	String	NSF OCE
attribute	NC_GLOBAL	awards_0_funding_source_nid	String	355
attribute	NC_GLOBAL	awards_0_program_manager	String	David L. Garrison
attribute	NC_GLOBAL	awards_0_program_manager_nid	String	50534
attribute	NC_GLOBAL	cdm_data_type	String	Other
attribute	NC_GLOBAL	comment	String	Calculation of bio-energetics for South Pacific Gyre marine sediment (site U1370) PI: James Bradley Version: 2019-10-04
attribute	NC_GLOBAL	Conventions	String	COARDS, CF-1.6, ACDD-1.3
attribute	NC_GLOBAL	creator_email	String	info at bco-dmo.org
attribute	NC_GLOBAL	creator_name	String	BCO-DMO
attribute	NC_GLOBAL	creator_type	String	institution
attribute	NC_GLOBAL	creator_url	String	https://www.bco-dmo.org/
attribute	NC_GLOBAL	data_source	String	extract_data_as_tsv version 2.3 19 Dec 2019
attribute	NC_GLOBAL	date_created	String	2019-10-04T16:31:39Z
attribute	NC_GLOBAL	date_modified	String	2019-12-20T14:19:13Z
attribute	NC_GLOBAL	defaultDataQuery	String	&time<now
attribute	NC_GLOBAL	doi	String	10.1575/1912/bco-dmo.778703.1
attribute	NC_GLOBAL	Easternmost_Easting	double	-153.1
attribute	NC_GLOBAL	geospatial_lat_max	double	-41.85
attribute	NC_GLOBAL	geospatial_lat_min	double	-41.85
attribute	NC_GLOBAL	geospatial_lat_units	String	degrees_north
attribute	NC_GLOBAL	geospatial_lon_max	double	-153.1
attribute	NC_GLOBAL	geospatial_lon_min	double	-153.1
attribute	NC_GLOBAL	geospatial_lon_units	String	degrees_east
attribute	NC_GLOBAL	infoUrl	String	https://www.bco-dmo.org/dataset/778703
attribute	NC_GLOBAL	institution	String	BCO-DMO
attribute	NC_GLOBAL	keywords	String	acetate, Acetate_Power_POC_plus_O2, age, alkane, bco, bco-dmo, biological, biomass, cell, chemical, data, dataset, death, degradation, depth, Depth_below_SWI, dmo, erddap, iii, kerogen, large, Large_cell_size_Necromass_C_mass, large_size_power_from_necromass_plus_O2, latitude, lipid, Lipid_n_alkane_Power_POC_plus_O2, longitude, management, mass, medium, Medium_cell_size_Necromass_C_mass, medium_size_power_from_necromass_plus_O2, necromass, Necromass_produced, O2, oceanography, office, oxygen, plus, poc, POC_degradation_rate, porosity, power, Power_H2_plus_O2, preliminary, produced, rate, size, small, Small_cell_size_Necromass_C_mass, small_size_power_from_necromass_plus_O2, specific, Specific_death_rate, toc, type, Type_III_IV_kerogen_Power_POC_plus_O2
attribute	NC_GLOBAL	license	String	https://www.bco-dmo.org/dataset/778703/license
attribute	NC_GLOBAL	metadata_source	String	https://www.bco-dmo.org/api/dataset/778703
attribute	NC_GLOBAL	Northernmost_Northing	double	-41.85
attribute	NC_GLOBAL	param_mapping	String	{'778703': {'lat': 'flag - latitude', 'lon': 'flag - longitude'}}
attribute	NC_GLOBAL	parameter_source	String	https://www.bco-dmo.org/mapserver/dataset/778703/parameters
attribute	NC_GLOBAL	people_0_affiliation	String	University of Southern California
attribute	NC_GLOBAL	people_0_affiliation_acronym	String	USC
attribute	NC_GLOBAL	people_0_person_name	String	James Bradley
attribute	NC_GLOBAL	people_0_person_nid	String	776340
attribute	NC_GLOBAL	people_0_role	String	Principal Investigator
attribute	NC_GLOBAL	people_0_role_type	String	originator
attribute	NC_GLOBAL	people_1_affiliation	String	University of Southern California
attribute	NC_GLOBAL	people_1_affiliation_acronym	String	USC
attribute	NC_GLOBAL	people_1_person_name	String	Doug LaRowe
attribute	NC_GLOBAL	people_1_person_nid	String	776342
attribute	NC_GLOBAL	people_1_role	String	Co-Principal Investigator
attribute	NC_GLOBAL	people_1_role_type	String	originator
attribute	NC_GLOBAL	people_2_affiliation	String	Woods Hole Oceanographic Institution
attribute	NC_GLOBAL	people_2_affiliation_acronym	String	WHOI BCO-DMO
attribute	NC_GLOBAL	people_2_person_name	String	Mathew Biddle
attribute	NC_GLOBAL	people_2_person_nid	String	708682
attribute	NC_GLOBAL	people_2_role	String	BCO-DMO Data Manager
attribute	NC_GLOBAL	people_2_role_type	String	related
attribute	NC_GLOBAL	project	String	BIO-SED
attribute	NC_GLOBAL	projects_0_acronym	String	BIO-SED
attribute	NC_GLOBAL	projects_0_description	String	Abstract (from C-DEBI, www.darkenergybiosphere.org) Microorganisms buried in marine sediments endure prolonged energy-limitation over geological timescales. My research within C-DEBI is motivated by the quest to determine and understand activity levels among microbial communities in the marine subsurface in relation to their geochemical and physical environment. To this end, in collaboration with Doug LaRowe and Jan Amend (USC), I developed novel modelling frameworks based on thermodynamic and microbial-modelling principles to explore and quantify: The energy sources to deeply buried microorganisms and their demand for energy. The activity of microorganisms and the factors that determine physiological transitions between active and dormant states. The varying energy requirements of active and dormant microbes and the allocation of energy between maintenance and growth. The cell-specific energy utilization (i.e. power) of subsurface life on a global scale. I led the development of a new freely-available and open-source platform MicroLow 1.0 – a process-based microbial model that explicitly considers physiological state transitions and energy for maintenance and growth. Using this model, I showed that energetic efficiency provides a selective advantage for long-term microbial survival in oligotrophic marine sediments. Numerous additional opportunities have arisen thanks to the C-DEBI program and community, including participation in two collaborative workshops (organic carbon preservation, impacts of deep sea mining), numerous valuable interactions, ongoing collaborations and spin-off projects, presentations at international conferences, professional development opportunities, media exposure, complementary funding including a Deep Carbon Observatory DLMV Fellowship, significant widening of my professional network, fieldwork opportunities, and career progression.
attribute	NC_GLOBAL	projects_0_end_date	String	2019-03
attribute	NC_GLOBAL	projects_0_name	String	Develop a 1D biogeochemical-evolutionary model for deep sediments
attribute	NC_GLOBAL	projects_0_project_nid	String	776336
attribute	NC_GLOBAL	projects_0_project_website	String	https://www.darkenergybiosphere.org/award/develop-a-1d-biogeochemical-evolutionary-model-for-deep-sediments/
attribute	NC_GLOBAL	projects_0_start_date	String	2016-10
attribute	NC_GLOBAL	publisher_name	String	Biological and Chemical Oceanographic Data Management Office (BCO-DMO)
attribute	NC_GLOBAL	publisher_type	String	institution
attribute	NC_GLOBAL	sourceUrl	String	(local files)
attribute	NC_GLOBAL	Southernmost_Northing	double	-41.85
attribute	NC_GLOBAL	standard_name_vocabulary	String	CF Standard Name Table v55
attribute	NC_GLOBAL	subsetVariables	String	latitude,longitude
attribute	NC_GLOBAL	summary	String	This data relates to the calculation of bio-energetics for South Pacific Gyre marine sediment (site U1370).
attribute	NC_GLOBAL	title	String	Modeling bio-energetics for South Pacific Gyre marine sediment at site U1370
attribute	NC_GLOBAL	version	String	1
attribute	NC_GLOBAL	Westernmost_Easting	double	-153.1
attribute	NC_GLOBAL	xml_source	String	osprey2erddap.update_xml() v1.3
variable	latitude		double
attribute	latitude	_CoordinateAxisType	String	Lat
attribute	latitude	_FillValue	double	NaN
attribute	latitude	actual_range	double	-41.85, -41.85
attribute	latitude	axis	String	Y
attribute	latitude	bcodmo_name	String	latitude
attribute	latitude	colorBarMaximum	double	90.0
attribute	latitude	colorBarMinimum	double	-90.0
attribute	latitude	description	String	latitude of hole U1370 with negative values indicating South
attribute	latitude	ioos_category	String	Location
attribute	latitude	long_name	String	Latitude
attribute	latitude	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P09/current/LATX/
attribute	latitude	standard_name	String	latitude
attribute	latitude	units	String	degrees_north
variable	longitude		double
attribute	longitude	_CoordinateAxisType	String	Lon
attribute	longitude	_FillValue	double	NaN
attribute	longitude	actual_range	double	-153.1, -153.1
attribute	longitude	axis	String	X
attribute	longitude	bcodmo_name	String	longitude
attribute	longitude	colorBarMaximum	double	180.0
attribute	longitude	colorBarMinimum	double	-180.0
attribute	longitude	description	String	longitude of hole U1370 with negative values indicating West
attribute	longitude	ioos_category	String	Location
attribute	longitude	long_name	String	Longitude
attribute	longitude	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P09/current/LONX/
attribute	longitude	standard_name	String	longitude
attribute	longitude	units	String	degrees_east
variable	Depth_below_SWI		double
attribute	Depth_below_SWI	_FillValue	double	NaN
attribute	Depth_below_SWI	actual_range	double	0.18915389920258135, 63.60322812674999
attribute	Depth_below_SWI	bcodmo_name	String	unknown
attribute	Depth_below_SWI	colorBarMaximum	double	8000.0
attribute	Depth_below_SWI	colorBarMinimum	double	-8000.0
attribute	Depth_below_SWI	colorBarPalette	String	TopographyDepth
attribute	Depth_below_SWI	description	String	Depth below the sediment-water interface
attribute	Depth_below_SWI	long_name	String	Depth
attribute	Depth_below_SWI	standard_name	String	depth
attribute	Depth_below_SWI	units	String	meters (m)
variable	Age		int
attribute	Age	_FillValue	int	2147483647
attribute	Age	actual_range	int	100, 75000000
attribute	Age	bcodmo_name	String	age
attribute	Age	description	String	Age of sediment
attribute	Age	long_name	String	Age
attribute	Age	units	String	years
variable	Porosity		double
attribute	Porosity	_FillValue	double	NaN
attribute	Porosity	actual_range	double	0.824214216613385, 0.8698601319358916
attribute	Porosity	bcodmo_name	String	porosity
attribute	Porosity	description	String	sediment porosity
attribute	Porosity	long_name	String	Porosity
attribute	Porosity	units	String	unitless
variable	TOC		double
attribute	TOC	_FillValue	double	NaN
attribute	TOC	actual_range	double	5.4451384080757125E-5, 7.811446559499539E-4
attribute	TOC	bcodmo_name	String	TOC
attribute	TOC	description	String	total organic carbon
attribute	TOC	long_name	String	TOC
attribute	TOC	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P01/current/CORGCOTX/
attribute	TOC	units	String	grams of Carbon per centimeter cubed (g C/cm3)
variable	POC_degradation_rate		double
attribute	POC_degradation_rate	_FillValue	double	NaN
attribute	POC_degradation_rate	actual_range	double	3.550456138391539E-13, 1.1531820244721446E-9
attribute	POC_degradation_rate	bcodmo_name	String	unknown
attribute	POC_degradation_rate	description	String	Organic carbon degradation rate
attribute	POC_degradation_rate	long_name	String	POC Degradation Rate
attribute	POC_degradation_rate	units	String	grams of Carbon per centimeter cubed per year (g C cm-3 y-1)
variable	Biomass		double
attribute	Biomass	_FillValue	double	NaN
attribute	Biomass	actual_range	double	1266.4434466229607, 2849933.2599394573
attribute	Biomass	bcodmo_name	String	biomass
attribute	Biomass	description	String	biomass
attribute	Biomass	long_name	String	Biomass
attribute	Biomass	units	String	cells per centimeter cubed (cells/cm3)
variable	Necromass_produced		double
attribute	Necromass_produced	_FillValue	double	NaN
attribute	Necromass_produced	actual_range	double	2.416707130802937E-5, 11.663352880224684
attribute	Necromass_produced	bcodmo_name	String	unknown
attribute	Necromass_produced	description	String	Necromass produced by dying cells
attribute	Necromass_produced	long_name	String	Necromass Produced
attribute	Necromass_produced	units	String	cells per centimeter cubed per year (cells cm-3 y-1)
variable	Specific_death_rate		double
attribute	Specific_death_rate	_FillValue	double	NaN
attribute	Specific_death_rate	actual_range	double	1.9082629684311734E-8, 4.092500355770597E-6
attribute	Specific_death_rate	bcodmo_name	String	unknown
attribute	Specific_death_rate	description	String	Mortality rate
attribute	Specific_death_rate	long_name	String	Specific Death Rate
attribute	Specific_death_rate	units	String	per year (y-1)
variable	Small_cell_size_Necromass_C_mass		double
attribute	Small_cell_size_Necromass_C_mass	_FillValue	double	NaN
attribute	Small_cell_size_Necromass_C_mass	actual_range	double	1.2083535654014688E-19, 5.831676440112343E-14
attribute	Small_cell_size_Necromass_C_mass	bcodmo_name	String	unknown
attribute	Small_cell_size_Necromass_C_mass	description	String	Necromass produced (assuming small cell mass of 5 fg C cell-1)
attribute	Small_cell_size_Necromass_C_mass	long_name	String	Small Cell Size Necromass C Mass
attribute	Small_cell_size_Necromass_C_mass	units	String	grams of Carbon per centimeter cubed per year (g C cm-3 y-1)
variable	small_size_power_from_necromass_plus_O2		double
attribute	small_size_power_from_necromass_plus_O2	_FillValue	double	NaN
attribute	small_size_power_from_necromass_plus_O2	actual_range	double	4.642352336150616E-15, 2.304579661562204E-9
attribute	small_size_power_from_necromass_plus_O2	bcodmo_name	String	unknown
attribute	small_size_power_from_necromass_plus_O2	description	String	Power from oxidation of necromass (small cells) with O2
attribute	small_size_power_from_necromass_plus_O2	long_name	String	Small Size Power From Necromass Plus O2
attribute	small_size_power_from_necromass_plus_O2	units	String	Jules per year (J y-1)
variable	Medium_cell_size_Necromass_C_mass		double
attribute	Medium_cell_size_Necromass_C_mass	_FillValue	double	NaN
attribute	Medium_cell_size_Necromass_C_mass	actual_range	double	3.383389983124112E-19, 1.6328694032314557E-13
attribute	Medium_cell_size_Necromass_C_mass	bcodmo_name	String	unknown
attribute	Medium_cell_size_Necromass_C_mass	description	String	Necromass produced (assuming medium cell mass of 14 fg C cell-1)
attribute	Medium_cell_size_Necromass_C_mass	long_name	String	Medium Cell Size Necromass C Mass
attribute	Medium_cell_size_Necromass_C_mass	units	String	grams of Carbon per centimeter cubed per year (g C cm-3 y-1)
variable	medium_size_power_from_necromass_plus_O2		double
attribute	medium_size_power_from_necromass_plus_O2	_FillValue	double	NaN
attribute	medium_size_power_from_necromass_plus_O2	actual_range	double	1.3011394582855094E-14, 6.459004385121135E-9
attribute	medium_size_power_from_necromass_plus_O2	bcodmo_name	String	unknown
attribute	medium_size_power_from_necromass_plus_O2	description	String	Power from oxidation of necromass (medium cells) with O2
attribute	medium_size_power_from_necromass_plus_O2	long_name	String	Medium Size Power From Necromass Plus O2
attribute	medium_size_power_from_necromass_plus_O2	units	String	(J y-1)
variable	Large_cell_size_Necromass_C_mass		double
attribute	Large_cell_size_Necromass_C_mass	_FillValue	double	NaN
attribute	Large_cell_size_Necromass_C_mass	actual_range	double	1.812530348102203E-18, 8.747514660168514E-13
attribute	Large_cell_size_Necromass_C_mass	bcodmo_name	String	unknown
attribute	Large_cell_size_Necromass_C_mass	description	String	Necromass produced (assuming large cell mass of 75 fg C cell-1)
attribute	Large_cell_size_Necromass_C_mass	long_name	String	Large Cell Size Necromass C Mass
attribute	Large_cell_size_Necromass_C_mass	units	String	grams of Carbon per centimeter cubed per year (g C cm-3 y-1)
variable	large_size_power_from_necromass_plus_O2		double
attribute	large_size_power_from_necromass_plus_O2	_FillValue	double	NaN
attribute	large_size_power_from_necromass_plus_O2	actual_range	double	6.981575127193487E-14, 3.465579034731966E-8
attribute	large_size_power_from_necromass_plus_O2	bcodmo_name	String	unknown
attribute	large_size_power_from_necromass_plus_O2	description	String	Power from oxidation of necromass (large cells) with O2
attribute	large_size_power_from_necromass_plus_O2	long_name	String	Large Size Power From Necromass Plus O2
attribute	large_size_power_from_necromass_plus_O2	units	String	Jules per year (J y-1)
variable	Acetate_Power_POC_plus_O2		double
attribute	Acetate_Power_POC_plus_O2	_FillValue	double	NaN
attribute	Acetate_Power_POC_plus_O2	actual_range	double	1.245859066121086E-8, 4.142911437174215E-5
attribute	Acetate_Power_POC_plus_O2	bcodmo_name	String	unknown
attribute	Acetate_Power_POC_plus_O2	description	String	Power from oxidation of organic carbon (acetate) with O2
attribute	Acetate_Power_POC_plus_O2	long_name	String	Acetate Power POC Plus O2
attribute	Acetate_Power_POC_plus_O2	units	String	Jules per year (J y-1)
variable	Type_III_IV_kerogen_Power_POC_plus_O2		double
attribute	Type_III_IV_kerogen_Power_POC_plus_O2	_FillValue	double	NaN
attribute	Type_III_IV_kerogen_Power_POC_plus_O2	actual_range	double	1.3381587520397516E-8, 4.4198073009867106E-5
attribute	Type_III_IV_kerogen_Power_POC_plus_O2	bcodmo_name	String	unknown
attribute	Type_III_IV_kerogen_Power_POC_plus_O2	description	String	Power from oxidation of organic carbon (Type III/IV kerogen) with O2
attribute	Type_III_IV_kerogen_Power_POC_plus_O2	long_name	String	Type III IV Kerogen Power POC Plus O2
attribute	Type_III_IV_kerogen_Power_POC_plus_O2	units	String	Jules per year (J y-1)
variable	Lipid_n_alkane_Power_POC_plus_O2		double
attribute	Lipid_n_alkane_Power_POC_plus_O2	_FillValue	double	NaN
attribute	Lipid_n_alkane_Power_POC_plus_O2	actual_range	double	1.923160649929854E-8, 6.352654632079507E-5
attribute	Lipid_n_alkane_Power_POC_plus_O2	bcodmo_name	String	unknown
attribute	Lipid_n_alkane_Power_POC_plus_O2	description	String	Power from oxidation of organic carbon (Lipid n-alkane) with O2
attribute	Lipid_n_alkane_Power_POC_plus_O2	long_name	String	Lipid N Alkane Power POC Plus O2
attribute	Lipid_n_alkane_Power_POC_plus_O2	units	String	Jules per year (J y-1)
variable	Power_H2_plus_O2		double
attribute	Power_H2_plus_O2	_FillValue	double	NaN
attribute	Power_H2_plus_O2	actual_range	double	1.75319630835189E-7, 1.7531963083518949E-7
attribute	Power_H2_plus_O2	bcodmo_name	String	unknown
attribute	Power_H2_plus_O2	description	String	Power from oxidation of H2 with O2
attribute	Power_H2_plus_O2	long_name	String	Power H2 Plus O2
attribute	Power_H2_plus_O2	units	String	Jules per year (J y-1)

The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.