ERDDAP > info > bcodmo_dataset_781862

Grid DAP Data	Sub- set	Table DAP Data	Make A Graph	W M S	Source Data Files	Acces- sible	Title	Sum- mary	FGDC, ISO, Metadata	Back- ground Info	RSS	E mail	Institution	Dataset ID
		data	graph		files	public	[Environmental Sensory Data] - Environmental, sensory data (temperature, light intensity, salinity, pH, dissolved oxygen, depth) sampled in August 2019 in Carrie Bow Caye, Belize (Collaborative research: Is hybridization among threatened Caribbean coral species the key to their survival or the harbinger of their extinction?)		F   I   M	background			BCO-DMO	bcodmo_dataset_781862

The Dataset's Variables and Attributes

Row Type	Variable Name	Attribute Name	Data Type	Value
attribute	NC_GLOBAL	access_formats	String	.htmlTable,.csv,.json,.mat,.nc,.tsv,.esriCsv,.geoJson,.odvTxt
attribute	NC_GLOBAL	acquisition_description	String	Hobos were deployed at depth specified by attaching a logger with a cable tie to the line of a subsurface buoy. Water quality measurements were collected 0.5 m below the surface using a YSI except for pH, which was collected in a small bucket at 0.5m and measurements were immediately collected within the bucket.
attribute	NC_GLOBAL	awards_0_award_nid	String	778093
attribute	NC_GLOBAL	awards_0_award_number	String	OCE-1929979
attribute	NC_GLOBAL	awards_0_data_url	String	http://www.nsf.gov/awardsearch/showAward.do?AwardNumber=1929979
attribute	NC_GLOBAL	awards_0_funder_name	String	NSF Division of Ocean Sciences
attribute	NC_GLOBAL	awards_0_funding_acronym	String	NSF OCE
attribute	NC_GLOBAL	awards_0_funding_source_nid	String	355
attribute	NC_GLOBAL	awards_0_program_manager	String	Daniel Thornhill
attribute	NC_GLOBAL	awards_0_program_manager_nid	String	722161
attribute	NC_GLOBAL	cdm_data_type	String	Other
attribute	NC_GLOBAL	comment	String	Environmental data PI: Nicole Fogarty Data Version 1: 2019-11-18
attribute	NC_GLOBAL	Conventions	String	COARDS, CF-1.6, ACDD-1.3
attribute	NC_GLOBAL	creator_email	String	info at bco-dmo.org
attribute	NC_GLOBAL	creator_name	String	BCO-DMO
attribute	NC_GLOBAL	creator_type	String	institution
attribute	NC_GLOBAL	creator_url	String	https://www.bco-dmo.org/
attribute	NC_GLOBAL	data_source	String	extract_data_as_tsv version 2.3 19 Dec 2019
attribute	NC_GLOBAL	date_created	String	2019-11-18T08:50:39Z
attribute	NC_GLOBAL	date_modified	String	2020-01-21T17:47:49Z
attribute	NC_GLOBAL	defaultDataQuery	String	&time<now
attribute	NC_GLOBAL	doi	String	10.1575/1912/bco-dmo.781862.1
attribute	NC_GLOBAL	Easternmost_Easting	double	-88.07777
attribute	NC_GLOBAL	geospatial_lat_max	double	16.80155
attribute	NC_GLOBAL	geospatial_lat_min	double	16.75145
attribute	NC_GLOBAL	geospatial_lat_units	String	degrees_north
attribute	NC_GLOBAL	geospatial_lon_max	double	-88.07777
attribute	NC_GLOBAL	geospatial_lon_min	double	-88.0822
attribute	NC_GLOBAL	geospatial_lon_units	String	degrees_east
attribute	NC_GLOBAL	geospatial_vertical_max	double	1.5
attribute	NC_GLOBAL	geospatial_vertical_min	double	0.5
attribute	NC_GLOBAL	geospatial_vertical_positive	String	down
attribute	NC_GLOBAL	geospatial_vertical_units	String	m
attribute	NC_GLOBAL	infoUrl	String	https://www.bco-dmo.org/dataset/781862
attribute	NC_GLOBAL	institution	String	BCO-DMO
attribute	NC_GLOBAL	instruments_0_acronym	String	pH Sensor
attribute	NC_GLOBAL	instruments_0_dataset_instrument_description	String	(Orion ROSS Ultra pH / ATC Triode double-junction combination electrode, 8157BNUMD, accuracy ±0.02 units)
attribute	NC_GLOBAL	instruments_0_dataset_instrument_nid	String	781873
attribute	NC_GLOBAL	instruments_0_description	String	General term for an instrument that measures the pH or how acidic or basic a solution is.
attribute	NC_GLOBAL	instruments_0_instrument_name	String	pH Sensor
attribute	NC_GLOBAL	instruments_0_instrument_nid	String	674
attribute	NC_GLOBAL	instruments_0_supplied_name	String	Orion ROSS Ultra pH / ATC Triode double-junction combination electrode
attribute	NC_GLOBAL	instruments_1_acronym	String	Dissolved Oxygen Sensor
attribute	NC_GLOBAL	instruments_1_dataset_instrument_description	String	YSI ProDSS Handheld Optical Dissolved Oxygen Sensor (626900) 0 to 20 mg/L: ±0.1 mg/L or 1% of reading, whichever is greater
attribute	NC_GLOBAL	instruments_1_dataset_instrument_nid	String	781871
attribute	NC_GLOBAL	instruments_1_description	String	An electronic device that measures the proportion of oxygen (O2) in the gas or liquid being analyzed
attribute	NC_GLOBAL	instruments_1_instrument_name	String	Dissolved Oxygen Sensor
attribute	NC_GLOBAL	instruments_1_instrument_nid	String	705
attribute	NC_GLOBAL	instruments_1_supplied_name	String	YSI ProDSS Handheld Optical Dissolved Oxygen Sensor
attribute	NC_GLOBAL	instruments_2_acronym	String	Conductivity Meter
attribute	NC_GLOBAL	instruments_2_dataset_instrument_description	String	YSI ProDSS Handheld Conductivity sensor (626903) ±1.0% of reading or ±0.1 ppt, whichever is greater
attribute	NC_GLOBAL	instruments_2_dataset_instrument_nid	String	781872
attribute	NC_GLOBAL	instruments_2_description	String	Conductivity Meter - An electrical conductivity meter (EC meter) measures the electrical conductivity in a solution. Commonly used in hydroponics, aquaculture and freshwater systems to monitor the amount of nutrients, salts or impurities in the water.
attribute	NC_GLOBAL	instruments_2_instrument_name	String	Conductivity Meter
attribute	NC_GLOBAL	instruments_2_instrument_nid	String	719
attribute	NC_GLOBAL	instruments_2_supplied_name	String	YSI ProDSS Conductivity sensor
attribute	NC_GLOBAL	instruments_3_dataset_instrument_description	String	Onset Hobo Pendant data loggers UA-002-64; accuracy  ± 0.53°C from 0° to 50°C (± 0.95°F from 32° to 122°F)
attribute	NC_GLOBAL	instruments_3_dataset_instrument_nid	String	781870
attribute	NC_GLOBAL	instruments_3_description	String	Electronic devices that record data over time or in relation to location either with a built-in instrument or sensor or via external instruments and sensors.
attribute	NC_GLOBAL	instruments_3_instrument_name	String	Data Logger
attribute	NC_GLOBAL	instruments_3_instrument_nid	String	731353
attribute	NC_GLOBAL	instruments_3_supplied_name	String	Onset Hobo Pendant data logger
attribute	NC_GLOBAL	keywords	String	bco, bco-dmo, biological, chemical, chemistry, data, dataset, date, density, depth, Dissolved_Oxygen, dmo, earth, Earth Science > Oceans > Ocean Chemistry > Oxygen, Earth Science > Oceans > Ocean Chemistry > pH, Earth Science > Oceans > Salinity/Density > Salinity, erddap, fraction, instrument, intensity, iso, ISO_DateTime_UTC, latitude, light, Light_Intensity, local, longitude, management, O2, ocean, oceanography, oceans, office, oxygen, practical, preliminary, reported, salinity, scale, science, sea, sea_water_ph_reported_on_total_scale, sea_water_practical_salinity, seawater, site, temperature, time, total, volume, volume_fraction_of_oxygen_in_sea_water, water
attribute	NC_GLOBAL	keywords_vocabulary	String	GCMD Science Keywords
attribute	NC_GLOBAL	license	String	https://www.bco-dmo.org/dataset/781862/license
attribute	NC_GLOBAL	metadata_source	String	https://www.bco-dmo.org/api/dataset/781862
attribute	NC_GLOBAL	Northernmost_Northing	double	16.80155
attribute	NC_GLOBAL	param_mapping	String	{'781862': {'Latitude': 'flag - latitude', 'Depth': 'flag - depth', 'Longitude': 'flag - longitude', 'ISO_DateTime_Local': 'flag - time'}}
attribute	NC_GLOBAL	parameter_source	String	https://www.bco-dmo.org/mapserver/dataset/781862/parameters
attribute	NC_GLOBAL	people_0_affiliation	String	University of North Carolina - Wilmington
attribute	NC_GLOBAL	people_0_affiliation_acronym	String	UNC-Wilmington
attribute	NC_GLOBAL	people_0_person_name	String	Nicole Fogarty
attribute	NC_GLOBAL	people_0_person_nid	String	663800
attribute	NC_GLOBAL	people_0_role	String	Principal Investigator
attribute	NC_GLOBAL	people_0_role_type	String	originator
attribute	NC_GLOBAL	people_1_affiliation	String	Pennsylvania State University
attribute	NC_GLOBAL	people_1_affiliation_acronym	String	PSU
attribute	NC_GLOBAL	people_1_person_name	String	Iliana B. Baums
attribute	NC_GLOBAL	people_1_person_nid	String	632664
attribute	NC_GLOBAL	people_1_role	String	Co-Principal Investigator
attribute	NC_GLOBAL	people_1_role_type	String	originator
attribute	NC_GLOBAL	people_2_affiliation	String	Woods Hole Oceanographic Institution
attribute	NC_GLOBAL	people_2_affiliation_acronym	String	WHOI BCO-DMO
attribute	NC_GLOBAL	people_2_person_name	String	Karen Soenen
attribute	NC_GLOBAL	people_2_person_nid	String	748773
attribute	NC_GLOBAL	people_2_role	String	BCO-DMO Data Manager
attribute	NC_GLOBAL	people_2_role_type	String	related
attribute	NC_GLOBAL	project	String	Coral Hybridization
attribute	NC_GLOBAL	projects_0_acronym	String	Coral Hybridization
attribute	NC_GLOBAL	projects_0_description	String	NSF Award Abstract: Reef-building acroporid corals form the foundation of shallow tropical coral communities throughout the Caribbean. Yet, the once dominant staghorn coral (Acropora cervicornis) and the elkhorn coral (A. palmata) have decreased by more than 90% since the 1980s, primarily from disease. Their continuing decline jeopardizes the ability of coral reefs to provide numerous societal and ecological benefits, including economic revenue from seafood harvesting and tourism and shoreline protection from extreme wave events caused by storms and hurricanes. Despite their protection under the U.S. Endangered Species Act since 2006, threats to the survival of reef-building acroporid corals remain pervasive and include disease and warming ocean temperatures that may lead to further large-scale mortality. However, hybridization among these closely related species is increasing and may provide an avenue for adaptation to a changing environment. While hybrids were rare in the past, they are now thriving in shallow habitats with extreme temperatures and irradiance and are expanding into the parental species habitats. Additional evidence suggests that the hybrid is more disease resistant than at least one of the parental species. Hybridization may therefore have the potential to rescue the threatened parental species from extinction through the transfer of adapted genes via hybrids mating with both parental species, but extensive gene flow may alter the evolutionary trajectory of the parental species and drive one or both to extinction. This collaborative project is to collect genetic and ecological data in order to understand the mechanisms underlying increasing hybrid abundance. The knowledge gained from this research will help facilitate more strategic management of coral populations under current and emerging threats to their survival. This project includes integrated research and educational opportunities for high school, undergraduate and graduate students, and a postdoctoral researcher. Students in the United States Virgin Islands will take part in coral spawning research and resource managers will receive training on acroporid reproduction to apply to coral restoration techniques. Current models predict the demise of reefs in the next 200 years due to increasing sea surface temperatures and ocean acidification. It is thus essential to identify habitats, taxa and evolutionary mechanisms that will allow some coral species to maintain their role as foundation fauna. Hybridization can provide an avenue for adaptation to changing conditions. Corals hybridize with some frequency and results may range from the introduction of a few alleles into existing parent species via introgression, to the birth of a new, perhaps better adapted genetic lineage. The only widely accepted coral hybrid system consists of the once dominant but now threatened Caribbean species, Acropora cervicornis and A. palmata. In the past, hybrid colonies originating from natural crosses between elkhorn and staghorn corals were rare, and evidence of hybrid reproduction was limited to infrequent matings with the staghorn coral. Recent field observations suggest that the hybrid is increasing and its ecological role is changing throughout the Caribbean. These hybrids appear to be less affected by the disease that led to the mass mortality of their parental species in recent decades. Hybrids are also found thriving in shallow habitats with high temperatures and irradiance suggesting they may be less susceptible to future warming scenarios. At the same time, they are expanding into the deeper parental species habitats. Preliminary genetic data indicate that hybrids are now mating with each other, demonstrating the potential for the formation of a new species. Further, hybrids appear to be capable of mating with both staghorn and elkhorn coral, perhaps leading to gene flow between the parent species via the hybrid. Research is proposed to address how the increase in hybridization and perhaps subsequent introgression will affect the current ecological role and the future evolutionary trajectory of Caribbean acroporids. Specifically, this collaborative project aims to answer the following questions: 1) What is the historic rate, direction, and degree of introgression across species ranges and genomes? Linkage block analysis based on genome-wide SNP genotyping across three replicate hybrid zones will answer this question. 2) What is the current extent and future potential of later generation hybrid formation? Morphometric and genetic analyses combined with in vitro fertilization assays will be used. 3) What mechanisms allow hybrids to thrive in hot, shallow waters? A series of manipulative in situ and ex situ experiments will determine whether biotic or abiotic factors favor hybrid survival in shallow waters. 4) Are hybrids more disease resistant than the parentals species? Disease transmission assays in reciprocal transplant experiments and histological analysis to determine the extent of disease will be conducted. A multidisciplinary approach will be taken that combines traditional and cutting edge technology to provide a detailed analysis of the evolutionary ecology of Caribbean corals. Note: PI Nicole Fogarty's original award OCE-1538469 was issued while at Nova Southeastern University. This was replaced by OCE-1929979 upon moving to the University of North Carolina Wilmington.
attribute	NC_GLOBAL	projects_0_end_date	String	2020-09
attribute	NC_GLOBAL	projects_0_geolocation	String	Caribbean and North-West Atlantic
attribute	NC_GLOBAL	projects_0_name	String	Collaborative research: Is hybridization among threatened Caribbean coral species the key to their survival or the harbinger of their extinction?
attribute	NC_GLOBAL	projects_0_project_nid	String	663794
attribute	NC_GLOBAL	projects_0_start_date	String	2015-10
attribute	NC_GLOBAL	publisher_name	String	Biological and Chemical Oceanographic Data Management Office (BCO-DMO)
attribute	NC_GLOBAL	publisher_type	String	institution
attribute	NC_GLOBAL	sourceUrl	String	(local files)
attribute	NC_GLOBAL	Southernmost_Northing	double	16.75145
attribute	NC_GLOBAL	standard_name_vocabulary	String	CF Standard Name Table v55
attribute	NC_GLOBAL	summary	String	Environmental, sensory data (temperature, light intensity, salinity, pH, dissolved oxygen, depth) sampled in August 2019 in Carrie Bow Caye, Belize
attribute	NC_GLOBAL	time_coverage_end	String	2019-08-26T14:59:00Z
attribute	NC_GLOBAL	time_coverage_start	String	2019-08-19T19:00:00Z
attribute	NC_GLOBAL	title	String	[Environmental Sensory Data] - Environmental, sensory data (temperature, light intensity, salinity, pH, dissolved oxygen, depth) sampled in August 2019 in Carrie Bow Caye, Belize (Collaborative research: Is hybridization among threatened Caribbean coral species the key to their survival or the harbinger of their extinction?)
attribute	NC_GLOBAL	version	String	1
attribute	NC_GLOBAL	Westernmost_Easting	double	-88.0822
attribute	NC_GLOBAL	xml_source	String	osprey2erddap.update_xml() v1.3
variable	Site		String
attribute	Site	bcodmo_name	String	site
attribute	Site	description	String	Site - local name
attribute	Site	long_name	String	Site
attribute	Site	units	String	unitless
variable	latitude		double
attribute	latitude	_CoordinateAxisType	String	Lat
attribute	latitude	_FillValue	double	NaN
attribute	latitude	actual_range	double	16.75145, 16.80155
attribute	latitude	axis	String	Y
attribute	latitude	bcodmo_name	String	latitude
attribute	latitude	colorBarMaximum	double	90.0
attribute	latitude	colorBarMinimum	double	-90.0
attribute	latitude	description	String	Latitude - South is negative
attribute	latitude	ioos_category	String	Location
attribute	latitude	long_name	String	Latitude
attribute	latitude	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P09/current/LATX/
attribute	latitude	standard_name	String	latitude
attribute	latitude	units	String	degrees_north
variable	longitude		double
attribute	longitude	_CoordinateAxisType	String	Lon
attribute	longitude	_FillValue	double	NaN
attribute	longitude	actual_range	double	-88.0822, -88.07777
attribute	longitude	axis	String	X
attribute	longitude	bcodmo_name	String	longitude
attribute	longitude	colorBarMaximum	double	180.0
attribute	longitude	colorBarMinimum	double	-180.0
attribute	longitude	description	String	Longitude - West is negative
attribute	longitude	ioos_category	String	Location
attribute	longitude	long_name	String	Longitude
attribute	longitude	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P09/current/LONX/
attribute	longitude	standard_name	String	longitude
attribute	longitude	units	String	degrees_east
variable	time		double
attribute	time	_CoordinateAxisType	String	Time
attribute	time	actual_range	double	1.5662412E9, 1.56683154E9
attribute	time	axis	String	T
attribute	time	bcodmo_name	String	ISO_DateTime_Local
attribute	time	description	String	Local Date/Time (GMT-04:00) in ISO format: YYYY-MM-DDTHH:MM:SS
attribute	time	ioos_category	String	Time
attribute	time	long_name	String	ISO Date Time Local
attribute	time	source_name	String	ISO_DateTime_Local
attribute	time	standard_name	String	time
attribute	time	time_origin	String	01-JAN-1970 00:00:00
attribute	time	time_precision	String	1970-01-01T00:00:00Z
attribute	time	units	String	seconds since 1970-01-01T00:00:00Z
variable	ISO_DateTime_UTC		String
attribute	ISO_DateTime_UTC	bcodmo_name	String	ISO_DateTime_UTC
attribute	ISO_DateTime_UTC	description	String	UTC Date/Time in ISO format: YYYY-MM-DDTHH:MM:SS
attribute	ISO_DateTime_UTC	long_name	String	ISO Date Time UTC
attribute	ISO_DateTime_UTC	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P01/current/DTUT8601/
attribute	ISO_DateTime_UTC	time_precision	String	1970-01-01T00:00:00Z
attribute	ISO_DateTime_UTC	units	String	unitless
variable	Temperature		float
attribute	Temperature	_FillValue	float	NaN
attribute	Temperature	actual_range	float	27.272, 33.953
attribute	Temperature	bcodmo_name	String	temperature
attribute	Temperature	description	String	Water temperature
attribute	Temperature	long_name	String	Temperature
attribute	Temperature	units	String	degrees Celcius (°C)
variable	Light_Intensity		float
attribute	Light_Intensity	_FillValue	float	NaN
attribute	Light_Intensity	actual_range	float	0.0, 253512.8
attribute	Light_Intensity	bcodmo_name	String	unknown
attribute	Light_Intensity	description	String	Light Intensity
attribute	Light_Intensity	long_name	String	Light Intensity
attribute	Light_Intensity	units	String	lux (lx)
variable	Instrument		String
attribute	Instrument	bcodmo_name	String	instrument
attribute	Instrument	description	String	Collection equipment
attribute	Instrument	long_name	String	Instrument
attribute	Instrument	units	String	unitless
variable	depth		double
attribute	depth	_CoordinateAxisType	String	Height
attribute	depth	_CoordinateZisPositive	String	down
attribute	depth	_FillValue	double	NaN
attribute	depth	actual_range	double	0.5, 1.5
attribute	depth	axis	String	Z
attribute	depth	bcodmo_name	String	depth
attribute	depth	colorBarMaximum	double	8000.0
attribute	depth	colorBarMinimum	double	-8000.0
attribute	depth	colorBarPalette	String	TopographyDepth
attribute	depth	description	String	Depth below surface
attribute	depth	ioos_category	String	Location
attribute	depth	long_name	String	Depth
attribute	depth	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P09/current/DEPH/
attribute	depth	positive	String	down
attribute	depth	standard_name	String	depth
attribute	depth	units	String	m
variable	Salinity		float
attribute	Salinity	_FillValue	float	NaN
attribute	Salinity	actual_range	float	36.18, 36.6
attribute	Salinity	bcodmo_name	String	sal
attribute	Salinity	colorBarMaximum	double	37.0
attribute	Salinity	colorBarMinimum	double	32.0
attribute	Salinity	description	String	Water salinity
attribute	Salinity	long_name	String	Sea Water Practical Salinity
attribute	Salinity	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P01/current/PSALST01/
attribute	Salinity	units	String	parts per thousand
variable	Dissolved_Oxygen		float
attribute	Dissolved_Oxygen	_FillValue	float	NaN
attribute	Dissolved_Oxygen	actual_range	float	6.47, 6.84
attribute	Dissolved_Oxygen	bcodmo_name	String	dissolved Oxygen
attribute	Dissolved_Oxygen	colorBarMaximum	double	1.0
attribute	Dissolved_Oxygen	colorBarMinimum	double	0.0
attribute	Dissolved_Oxygen	description	String	Dissolved oxygen concentration
attribute	Dissolved_Oxygen	long_name	String	Volume Fraction Of Oxygen In Sea Water
attribute	Dissolved_Oxygen	units	String	milligram per liter (mg/l)
variable	pH		float
attribute	pH	_FillValue	float	NaN
attribute	pH	actual_range	float	8.16, 8.18
attribute	pH	bcodmo_name	String	pH
attribute	pH	colorBarMaximum	double	9.0
attribute	pH	colorBarMinimum	double	7.0
attribute	pH	description	String	Water pH
attribute	pH	long_name	String	Sea Water Ph Reported On Total Scale
attribute	pH	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P01/current/PHXXZZXX/
attribute	pH	units	String	molar concentrations of H ions

The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.