ERDDAP > info > bcodmo_dataset_782901

Grid DAP Data	Sub- set	Table DAP Data	Make A Graph	W M S	Source Data Files	Acces- sible	Title	Sum- mary	FGDC, ISO, Metadata	Back- ground Info	RSS	E mail	Institution	Dataset ID
		data	graph		files	public	[Ehux physiology under thermal variation] - Intracellular elemental quotas under low and high temperatures for E. huxleyi in constant and fluctuating thermal environments (How does intensity and frequency of environmental variability affect phytoplankton growth?)		I   M	background			BCO-DMO	bcodmo_dataset_782901

The Dataset's Variables and Attributes

Row Type	Variable Name	Attribute Name	Data Type	Value
attribute	NC_GLOBAL	access_formats	String	.htmlTable,.csv,.json,.mat,.nc,.tsv
attribute	NC_GLOBAL	acquisition_description	String	Chlorophyll a, total particulate carbon (TPC), particulate organic carbon (POC),\u00a0 particulate organic nitrogen (PON), and particulate organic carbon (POP) were filtered onto GF/F filters and analyzed following the methodology used in Fu et al., 2007. Particulate inorganic carbon was defined as the difference between TPC and POC after POC filters had been subjected to concentrated HCl fumes for 24 hours to remove all inorganic carbon. Calcification, photosynthesis, and carbon fixation rates were all measured following the procedures outlined in Feng et al., 2008. All data was processed using either R (v 3.4.4) or Microsoft Excel 2016.\u00a0
attribute	NC_GLOBAL	awards_0_award_nid	String	668546
attribute	NC_GLOBAL	awards_0_award_number	String	OCE-1538525
attribute	NC_GLOBAL	awards_0_data_url	String	http://www.nsf.gov/awardsearch/showAward.do?AwardNumber=1538525
attribute	NC_GLOBAL	awards_0_funder_name	String	NSF Division of Ocean Sciences
attribute	NC_GLOBAL	awards_0_funding_acronym	String	NSF OCE
attribute	NC_GLOBAL	awards_0_funding_source_nid	String	355
attribute	NC_GLOBAL	awards_0_program_manager	String	Michael E. Sieracki
attribute	NC_GLOBAL	awards_0_program_manager_nid	String	50446
attribute	NC_GLOBAL	cdm_data_type	String	Other
attribute	NC_GLOBAL	comment	String	Intracellular elemental quotas under low and high temperatures for E. huxleyi in constant and fluctuating thermal environments PI: D. Hutchins (USC) version date: 2019-11-26
attribute	NC_GLOBAL	Conventions	String	COARDS, CF-1.6, ACDD-1.3
attribute	NC_GLOBAL	creator_email	String	info at bco-dmo.org
attribute	NC_GLOBAL	creator_name	String	BCO-DMO
attribute	NC_GLOBAL	creator_type	String	institution
attribute	NC_GLOBAL	creator_url	String	https://www.bco-dmo.org/
attribute	NC_GLOBAL	data_source	String	extract_data_as_tsv version 2.3 19 Dec 2019
attribute	NC_GLOBAL	dataset_current_state	String	Final and no updates
attribute	NC_GLOBAL	date_created	String	2019-11-26T14:53:42Z
attribute	NC_GLOBAL	date_modified	String	2020-04-30T12:58:37Z
attribute	NC_GLOBAL	defaultDataQuery	String	&time<now
attribute	NC_GLOBAL	doi	String	10.26008/1912/bco-dmo.782901.1
attribute	NC_GLOBAL	infoUrl	String	https://www.bco-dmo.org/dataset/782901
attribute	NC_GLOBAL	institution	String	BCO-DMO
attribute	NC_GLOBAL	instruments_0_acronym	String	Turner Fluorometer 10-AU
attribute	NC_GLOBAL	instruments_0_dataset_instrument_nid	String	782906
attribute	NC_GLOBAL	instruments_0_description	String	The Turner Designs 10-AU Field Fluorometer is used to measure Chlorophyll fluorescence. The 10AU Fluorometer can be set up for continuous-flow monitoring or discrete sample analyses. A variety of compounds can be measured using application-specific optical filters available from the manufacturer. (read more from Turner Designs, turnerdesigns.com, Sunnyvale, CA, USA)
attribute	NC_GLOBAL	instruments_0_instrument_external_identifier	String	https://vocab.nerc.ac.uk/collection/L22/current/TOOL0393/
attribute	NC_GLOBAL	instruments_0_instrument_name	String	Turner Designs Fluorometer 10-AU
attribute	NC_GLOBAL	instruments_0_instrument_nid	String	464
attribute	NC_GLOBAL	instruments_1_acronym	String	LSC
attribute	NC_GLOBAL	instruments_1_dataset_instrument_description	String	Used to process radioactive assays.
attribute	NC_GLOBAL	instruments_1_dataset_instrument_nid	String	782908
attribute	NC_GLOBAL	instruments_1_description	String	Liquid scintillation counting is an analytical technique which is defined by the incorporation of the radiolabeled analyte into uniform distribution with a liquid chemical medium capable of converting the kinetic energy of nuclear emissions into light energy. Although the liquid scintillation counter is a sophisticated laboratory counting system used the quantify the activity of particulate emitting (ß and a) radioactive samples, it can also detect the auger electrons emitted from 51Cr and 125I samples.
attribute	NC_GLOBAL	instruments_1_instrument_external_identifier	String	https://vocab.nerc.ac.uk/collection/L05/current/LAB21/
attribute	NC_GLOBAL	instruments_1_instrument_name	String	Liquid Scintillation Counter
attribute	NC_GLOBAL	instruments_1_instrument_nid	String	624
attribute	NC_GLOBAL	instruments_1_supplied_name	String	Perkin Elmer (CA) Liquid Scintillation Counter
attribute	NC_GLOBAL	instruments_2_dataset_instrument_description	String	Used to measure organic/inorganic carbon and nitrogen.
attribute	NC_GLOBAL	instruments_2_dataset_instrument_nid	String	782907
attribute	NC_GLOBAL	instruments_2_description	String	Instruments that quantify carbon, nitrogen and sometimes other elements by combusting the sample at very high temperature and assaying the resulting gaseous oxides. Usually used for samples including organic material.
attribute	NC_GLOBAL	instruments_2_instrument_external_identifier	String	https://vocab.nerc.ac.uk/collection/L05/current/LAB01/
attribute	NC_GLOBAL	instruments_2_instrument_name	String	Elemental Analyzer
attribute	NC_GLOBAL	instruments_2_instrument_nid	String	546339
attribute	NC_GLOBAL	instruments_2_supplied_name	String	440 elemental analyzer (Costech Inc., CA)
attribute	NC_GLOBAL	keywords	String	bco, bco-dmo, biological, calcif, calcif_photosyn, calcification, calcification_rate, carbon, carbon_fix_rate, chemical, chemistry, Chla, Chla_POC, chlorophyll, chlorophyll-a, concentration, concentration_of_chlorophyll_in_sea_water, data, dataset, dmo, earth, Earth Science > Oceans > Ocean Chemistry > Chlorophyll, erddap, fix, inorganic, management, ocean, oceanography, oceans, office, organic, particulate, photosyn, photosyn_rate, pic, PIC_POC, poc, POC_POP, pon, PON_POP, pop, preliminary, rate, science, sea, seawater, temperature, tpc, TPC_PON, variation, water
attribute	NC_GLOBAL	keywords_vocabulary	String	GCMD Science Keywords
attribute	NC_GLOBAL	license	String	https://www.bco-dmo.org/dataset/782901/license
attribute	NC_GLOBAL	metadata_source	String	https://www.bco-dmo.org/api/dataset/782901
attribute	NC_GLOBAL	param_mapping	String	{'782901': {}}
attribute	NC_GLOBAL	parameter_source	String	https://www.bco-dmo.org/mapserver/dataset/782901/parameters
attribute	NC_GLOBAL	people_0_affiliation	String	University of Southern California
attribute	NC_GLOBAL	people_0_affiliation_acronym	String	USC
attribute	NC_GLOBAL	people_0_person_name	String	David A. Hutchins
attribute	NC_GLOBAL	people_0_person_nid	String	51048
attribute	NC_GLOBAL	people_0_role	String	Principal Investigator
attribute	NC_GLOBAL	people_0_role_type	String	originator
attribute	NC_GLOBAL	people_1_affiliation	String	Woods Hole Oceanographic Institution
attribute	NC_GLOBAL	people_1_affiliation_acronym	String	WHOI BCO-DMO
attribute	NC_GLOBAL	people_1_person_name	String	Nancy Copley
attribute	NC_GLOBAL	people_1_person_nid	String	50396
attribute	NC_GLOBAL	people_1_role	String	BCO-DMO Data Manager
attribute	NC_GLOBAL	people_1_role_type	String	related
attribute	NC_GLOBAL	project	String	Environmental variability and phytoplankton growth
attribute	NC_GLOBAL	projects_0_acronym	String	Environmental variability and phytoplankton growth
attribute	NC_GLOBAL	projects_0_description	String	NSF Award Abstract: Microscopic plants called phytoplankton are key members of global oceanic ecosystems, since their photosynthesis supports the majority of the marine food chain and produces about as much oxygen as land plants. Because of this, oceanographers have often carried out experiments examining how factors such as temperature and carbon dioxide levels may affect phytoplankton growth. Most previous experiments have used constant levels of temperature and carbon dioxide, but it is clear from looking at measurements from real ocean ecosystems that these two factors often vary greatly over timescales of days to weeks. Using field and laboratory experiments along with computer modeling, this project will test how the growth of several major groups of phytoplankton differs under constant conditions of temperature and carbon dioxide, compared to conditions in which these factors fluctuate in intensity and frequency. This research will give marine scientists a better picture of how phytoplankton may respond to a varying natural environment today and in the future, and therefore help us to understand how ocean food webs function to support critical living resources such as fisheries. The project will train graduate and undergraduate students and a postdoctoral researcher, and the lead scientists will be involved in an ocean science education program for largely minority high school students from a downtown Los Angeles school district. The goal of this project is to use laboratory culture and natural community experiments to understand how realistically fluctuating temperature and pCO2 conditions may affect globally important phytoplankton groups in ways that differ from the artificial constant exposures used in previous work. Culture experiments will test how the intensity and frequency of short-term thermal and carbonate fluctuations affects the growth responses of diazotrophic and picoplanktonic cyanobacteria, coccolithophores, and diatoms under both current and projected future environmental conditions. These lab results will be supported and extended by parallel experiments using mixed natural assemblages from the California upwelling regime, allowing us to test these same questions using phytoplankton communities that experience large seasonal shifts between highly dynamic thermal and carbonate system conditions during the spring upwelling season, and relatively much more static conditions during fall stratification events. These results will be synthesized using a new generation of numerical models that employ novel approaches to incorporating realistic environmental variations to allow more accurate predictions of phytoplankton responses to a dynamic environment in today's marine ecosystems, and in the future changing ocean.
attribute	NC_GLOBAL	projects_0_end_date	String	2018-11
attribute	NC_GLOBAL	projects_0_geolocation	String	laboratory experiment
attribute	NC_GLOBAL	projects_0_name	String	How does intensity and frequency of environmental variability affect phytoplankton growth?
attribute	NC_GLOBAL	projects_0_project_nid	String	668547
attribute	NC_GLOBAL	projects_0_start_date	String	2015-12
attribute	NC_GLOBAL	publisher_name	String	Biological and Chemical Oceanographic Data Management Office (BCO-DMO)
attribute	NC_GLOBAL	publisher_type	String	institution
attribute	NC_GLOBAL	sourceUrl	String	(local files)
attribute	NC_GLOBAL	standard_name_vocabulary	String	CF Standard Name Table v55
attribute	NC_GLOBAL	summary	String	Intracellular elemental quotas under low and high temperatures for E. huxleyi in constant and fluctuating thermal environments. This dataset includes the growth rates under low and high temperatures for E. huxleyi in constant and fluctuating thermal environments. Global warming will be combined with predicted increases in thermal variability in the future surface ocean, but how temperature dynamics will affect phytoplankton biology and biogeochemistry is largely unknown. Here, we examine the responses of the globally important marine coccolithophore Emiliania huxleyi to thermal variations at two frequencies (1 d and 2 d) at low (18.5 \u00b0C) and high (25.5 \u00b0C) mean temperatures. Elevated temperature and thermal variation decreased growth, calcification and physiological rates, both individually and interactively. The 1 d thermal variation frequencies were less inhibitory than 2 d variations under high temperatures, indicating that high-frequency thermal fluctuations may reduce heat-induced mortality and mitigate some impacts of extreme high-temperature events. Cellular elemental composition and calcification was significantly affected by both thermal variation treatments relative to each other and to the constant temperature controls. The negative effects of thermal variation on E. huxleyi growth rate and physiology are especially pronounced at high temperatures. These responses of the key marine calcifier E. huxleyi to warmer, more variable temperature regimes have potentially large implications for ocean productivity and marine biogeochemical cycles under a future changing climate.
attribute	NC_GLOBAL	title	String	[Ehux physiology under thermal variation] - Intracellular elemental quotas under low and high temperatures for E. huxleyi in constant and fluctuating thermal environments (How does intensity and frequency of environmental variability affect phytoplankton growth?)
attribute	NC_GLOBAL	version	String	1
attribute	NC_GLOBAL	xml_source	String	osprey2erddap.update_xml() v1.5
variable	Temperature		String
attribute	Temperature	bcodmo_name	String	temperature
attribute	Temperature	description	String	treatment temperature
attribute	Temperature	long_name	String	Temperature
attribute	Temperature	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P01/current/TEMPP901/
attribute	Temperature	units	String	degrees Celsius
variable	variation		String
attribute	variation	bcodmo_name	String	treatment
attribute	variation	description	String	temperature variation treatment description
attribute	variation	long_name	String	Variation
attribute	variation	units	String	unitless
variable	POC		float
attribute	POC	_FillValue	float	NaN
attribute	POC	actual_range	float	5.3068, 22.4954
attribute	POC	bcodmo_name	String	POC
attribute	POC	description	String	concentration of Particulate Organic Carbon
attribute	POC	long_name	String	Particulate Organic Carbon
attribute	POC	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P01/current/CORGCAP1/
attribute	POC	units	String	picograms/cell
variable	PIC		float
attribute	PIC	_FillValue	float	NaN
attribute	PIC	actual_range	float	1.5017, 6.1264
attribute	PIC	bcodmo_name	String	PIC
attribute	PIC	description	String	concentration of Particulate Inorganic Carbon
attribute	PIC	long_name	String	Particulate Inorganic Carbon
attribute	PIC	units	String	picograms/cell
variable	PON		float
attribute	PON	_FillValue	float	NaN
attribute	PON	actual_range	float	1.1631, 4.8458
attribute	PON	bcodmo_name	String	PON
attribute	PON	description	String	concentration of Particulate Organic Nitrogen
attribute	PON	long_name	String	PON
attribute	PON	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P01/current/MDMAP013/
attribute	PON	units	String	picograms/cell
variable	TPC		float
attribute	TPC	_FillValue	float	NaN
attribute	TPC	actual_range	float	9.3102, 21.7491
attribute	TPC	bcodmo_name	String	TPC
attribute	TPC	description	String	concentration of Total Particulate Carbon
attribute	TPC	long_name	String	TPC
attribute	TPC	units	String	picograms/cell
variable	POP		float
attribute	POP	_FillValue	float	NaN
attribute	POP	actual_range	float	0.0467, 0.0855
attribute	POP	bcodmo_name	String	POP
attribute	POP	description	String	concentration of Particulate Organic Phosphorous
attribute	POP	long_name	String	POP
attribute	POP	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P01/current/OPHSVLPT/
attribute	POP	units	String	picograms/cell
variable	Chla		float
attribute	Chla	_FillValue	float	NaN
attribute	Chla	actual_range	float	0.1088, 0.2669
attribute	Chla	bcodmo_name	String	chlorophyll a
attribute	Chla	colorBarMaximum	double	30.0
attribute	Chla	colorBarMinimum	double	0.03
attribute	Chla	colorBarScale	String	Log
attribute	Chla	description	String	concentration of Chlorophyll a
attribute	Chla	long_name	String	Concentration Of Chlorophyll In Sea Water
attribute	Chla	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P01/current/CPHLHPP1/
attribute	Chla	units	String	picograms/cell
variable	carbon_fix_rate		float
attribute	carbon_fix_rate	_FillValue	float	NaN
attribute	carbon_fix_rate	actual_range	float	0.5151, 0.8688
attribute	carbon_fix_rate	bcodmo_name	String	C_photosyn
attribute	carbon_fix_rate	description	String	carbon fixation rate using a 14C incubation technique
attribute	carbon_fix_rate	long_name	String	Carbon Fix Rate
attribute	carbon_fix_rate	units	String	10 -7 umol Carbon cell-1 hr-1
variable	photosyn_rate		float
attribute	photosyn_rate	_FillValue	float	NaN
attribute	photosyn_rate	actual_range	float	0.316, 0.5926
attribute	photosyn_rate	bcodmo_name	String	C_photosyn
attribute	photosyn_rate	description	String	photosynthetic rate using a 14C incubation technique
attribute	photosyn_rate	long_name	String	Photosyn Rate
attribute	photosyn_rate	units	String	10 -7 umol Carbon cell-1 hr-1
variable	calcification_rate		float
attribute	calcification_rate	_FillValue	float	NaN
attribute	calcification_rate	actual_range	float	0.0704, 0.3775
attribute	calcification_rate	bcodmo_name	String	calcification
attribute	calcification_rate	description	String	calcification rate using a 14C incubation technique
attribute	calcification_rate	long_name	String	Calcification Rate
attribute	calcification_rate	units	String	10 -7 umol Carbon cell-1 hr-1
variable	Chla_POC		float
attribute	Chla_POC	_FillValue	float	NaN
attribute	Chla_POC	actual_range	float	11.189, 21.0844
attribute	Chla_POC	bcodmo_name	String	unknown
attribute	Chla_POC	colorBarMaximum	double	30.0
attribute	Chla_POC	colorBarMinimum	double	0.03
attribute	Chla_POC	colorBarScale	String	Log
attribute	Chla_POC	description	String	Chla to POC ratio
attribute	Chla_POC	long_name	String	Concentration Of Chlorophyll In Sea Water
attribute	Chla_POC	units	String	milligrams/gram
variable	calcif_photosyn		float
attribute	calcif_photosyn	_FillValue	float	NaN
attribute	calcif_photosyn	actual_range	float	0.1188, 0.8421
attribute	calcif_photosyn	bcodmo_name	String	unknown
attribute	calcif_photosyn	description	String	calcificationto photosynthesis ratio
attribute	calcif_photosyn	long_name	String	Calcif Photosyn
attribute	calcif_photosyn	units	String	unitless
variable	PIC_POC		float
attribute	PIC_POC	_FillValue	float	NaN
attribute	PIC_POC	actual_range	float	0.0897, 0.7544
attribute	PIC_POC	bcodmo_name	String	unknown
attribute	PIC_POC	description	String	PIC to POC ratio (mol/mol)
attribute	PIC_POC	long_name	String	PIC POC
attribute	PIC_POC	units	String	unitless
variable	POC_POP		float
attribute	POC_POP	_FillValue	float	NaN
attribute	POC_POP	actual_range	float	155.893, 218.7171
attribute	POC_POP	bcodmo_name	String	unknown
attribute	POC_POP	description	String	POC to POP ratio (mol/mol)
attribute	POC_POP	long_name	String	POC POP
attribute	POC_POP	units	String	unitless
variable	PON_POP		float
attribute	PON_POP	_FillValue	float	NaN
attribute	PON_POP	actual_range	float	17.1259, 42.3091
attribute	PON_POP	bcodmo_name	String	unknown
attribute	PON_POP	description	String	PON to POP ratio (mol/mol)
attribute	PON_POP	long_name	String	PON POP
attribute	PON_POP	units	String	unitless
variable	TPC_PON		float
attribute	TPC_PON	_FillValue	float	NaN
attribute	TPC_PON	actual_range	float	4.7712, 9.3391
attribute	TPC_PON	bcodmo_name	String	unknown
attribute	TPC_PON	description	String	TPC to PON ratio (mol/mol)
attribute	TPC_PON	long_name	String	TPC PON
attribute	TPC_PON	units	String	unitless

The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.