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Grid DAP Data | Sub- set | Table DAP Data | Make A Graph | W M S | Source Data Files | Acces- sible | Title | Sum- mary | FGDC, ISO, Metadata | Back- ground Info | RSS | E | Institution | Dataset ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
set | data | graph | files | public | [global] - Calculated power from the oxidation of necromass that is produced in marine sediment on a global scale. (Develop a 1D biogeochemical-evolutionary model for deep sediments) | F I M | background | BCO-DMO | bcodmo_dataset_784480 |
Row Type | Variable Name | Attribute Name | Data Type | Value |
---|---|---|---|---|
attribute | NC_GLOBAL | access_formats | String | .htmlTable,.csv,.json,.mat,.nc,.tsv,.esriCsv,.geoJson |
attribute | NC_GLOBAL | acquisition_description | String | "" |
attribute | NC_GLOBAL | awards_0_award_nid | String | 554980 |
attribute | NC_GLOBAL | awards_0_award_number | String | OCE-0939564 |
attribute | NC_GLOBAL | awards_0_data_url | String | http://www.nsf.gov/awardsearch/showAward?AWD_ID=0939564 |
attribute | NC_GLOBAL | awards_0_funder_name | String | NSF Division of Ocean Sciences |
attribute | NC_GLOBAL | awards_0_funding_acronym | String | NSF OCE |
attribute | NC_GLOBAL | awards_0_funding_source_nid | String | 355 |
attribute | NC_GLOBAL | awards_0_program_manager | String | David L. Garrison |
attribute | NC_GLOBAL | awards_0_program_manager_nid | String | 50534 |
attribute | NC_GLOBAL | cdm_data_type | String | Other |
attribute | NC_GLOBAL | comment | String | Necromass as a limited source of energy for microorganisms in marine sediments (site U1370) PI: James Bradley Version: 2019-10-04 |
attribute | NC_GLOBAL | Conventions | String | COARDS, CF-1.6, ACDD-1.3 |
attribute | NC_GLOBAL | creator_email | String | info at bco-dmo.org |
attribute | NC_GLOBAL | creator_name | String | BCO-DMO |
attribute | NC_GLOBAL | creator_type | String | institution |
attribute | NC_GLOBAL | creator_url | String | https://www.bco-dmo.org/ |
attribute | NC_GLOBAL | data_source | String | extract_data_as_tsv version 2.3 19 Dec 2019 |
attribute | NC_GLOBAL | date_created | String | 2019-12-17T19:07:38Z |
attribute | NC_GLOBAL | date_modified | String | 2019-12-20T14:20:05Z |
attribute | NC_GLOBAL | defaultDataQuery | String | &time<now |
attribute | NC_GLOBAL | doi | String | 10.1575/1912/bco-dmo.784480.1 |
attribute | NC_GLOBAL | Easternmost_Easting | double | -153.1 |
attribute | NC_GLOBAL | geospatial_lat_max | double | -41.85 |
attribute | NC_GLOBAL | geospatial_lat_min | double | -41.85 |
attribute | NC_GLOBAL | geospatial_lat_units | String | degrees_north |
attribute | NC_GLOBAL | geospatial_lon_max | double | -153.1 |
attribute | NC_GLOBAL | geospatial_lon_min | double | -153.1 |
attribute | NC_GLOBAL | geospatial_lon_units | String | degrees_east |
attribute | NC_GLOBAL | infoUrl | String | https://www.bco-dmo.org/dataset/784480 |
attribute | NC_GLOBAL | institution | String | BCO-DMO |
attribute | NC_GLOBAL | keywords | String | age, bco, bco-dmo, biological, cell, cells, chemical, data, dataset, death, Death_rate, depth, Depth_below_SWI, dmo, erddap, large, latitude, law, longitude, management, medium, necromas, oceanography, office, power, Power_cell_size_large, Power_cell_size_medium, Power_cell_size_small, Power_law_cells, preliminary, rate, sediment, Sediment_Age, size, small |
attribute | NC_GLOBAL | license | String | https://www.bco-dmo.org/dataset/784480/license |
attribute | NC_GLOBAL | metadata_source | String | https://www.bco-dmo.org/api/dataset/784480 |
attribute | NC_GLOBAL | Northernmost_Northing | double | -41.85 |
attribute | NC_GLOBAL | param_mapping | String | {'784480': {'lat': 'flag - latitude', 'lon': 'flag - longitude'}} |
attribute | NC_GLOBAL | parameter_source | String | https://www.bco-dmo.org/mapserver/dataset/784480/parameters |
attribute | NC_GLOBAL | people_0_affiliation | String | University of Southern California |
attribute | NC_GLOBAL | people_0_affiliation_acronym | String | USC |
attribute | NC_GLOBAL | people_0_person_name | String | James Bradley |
attribute | NC_GLOBAL | people_0_person_nid | String | 776340 |
attribute | NC_GLOBAL | people_0_role | String | Principal Investigator |
attribute | NC_GLOBAL | people_0_role_type | String | originator |
attribute | NC_GLOBAL | people_1_affiliation | String | University of Southern California |
attribute | NC_GLOBAL | people_1_affiliation_acronym | String | USC |
attribute | NC_GLOBAL | people_1_person_name | String | Doug LaRowe |
attribute | NC_GLOBAL | people_1_person_nid | String | 776342 |
attribute | NC_GLOBAL | people_1_role | String | Co-Principal Investigator |
attribute | NC_GLOBAL | people_1_role_type | String | originator |
attribute | NC_GLOBAL | people_2_affiliation | String | Woods Hole Oceanographic Institution |
attribute | NC_GLOBAL | people_2_affiliation_acronym | String | WHOI BCO-DMO |
attribute | NC_GLOBAL | people_2_person_name | String | Mathew Biddle |
attribute | NC_GLOBAL | people_2_person_nid | String | 708682 |
attribute | NC_GLOBAL | people_2_role | String | BCO-DMO Data Manager |
attribute | NC_GLOBAL | people_2_role_type | String | related |
attribute | NC_GLOBAL | project | String | BIO-SED |
attribute | NC_GLOBAL | projects_0_acronym | String | BIO-SED |
attribute | NC_GLOBAL | projects_0_description | String | Abstract (from C-DEBI, www.darkenergybiosphere.org) Microorganisms buried in marine sediments endure prolonged energy-limitation over geological timescales. My research within C-DEBI is motivated by the quest to determine and understand activity levels among microbial communities in the marine subsurface in relation to their geochemical and physical environment. To this end, in collaboration with Doug LaRowe and Jan Amend (USC), I developed novel modelling frameworks based on thermodynamic and microbial-modelling principles to explore and quantify: The energy sources to deeply buried microorganisms and their demand for energy. The activity of microorganisms and the factors that determine physiological transitions between active and dormant states. The varying energy requirements of active and dormant microbes and the allocation of energy between maintenance and growth. The cell-specific energy utilization (i.e. power) of subsurface life on a global scale. I led the development of a new freely-available and open-source platform MicroLow 1.0 – a process-based microbial model that explicitly considers physiological state transitions and energy for maintenance and growth. Using this model, I showed that energetic efficiency provides a selective advantage for long-term microbial survival in oligotrophic marine sediments. Numerous additional opportunities have arisen thanks to the C-DEBI program and community, including participation in two collaborative workshops (organic carbon preservation, impacts of deep sea mining), numerous valuable interactions, ongoing collaborations and spin-off projects, presentations at international conferences, professional development opportunities, media exposure, complementary funding including a Deep Carbon Observatory DLMV Fellowship, significant widening of my professional network, fieldwork opportunities, and career progression. |
attribute | NC_GLOBAL | projects_0_end_date | String | 2019-03 |
attribute | NC_GLOBAL | projects_0_name | String | Develop a 1D biogeochemical-evolutionary model for deep sediments |
attribute | NC_GLOBAL | projects_0_project_nid | String | 776336 |
attribute | NC_GLOBAL | projects_0_project_website | String | https://www.darkenergybiosphere.org/award/develop-a-1d-biogeochemical-evolutionary-model-for-deep-sediments/ |
attribute | NC_GLOBAL | projects_0_start_date | String | 2016-10 |
attribute | NC_GLOBAL | publisher_name | String | Biological and Chemical Oceanographic Data Management Office (BCO-DMO) |
attribute | NC_GLOBAL | publisher_type | String | institution |
attribute | NC_GLOBAL | sourceUrl | String | (local files) |
attribute | NC_GLOBAL | Southernmost_Northing | double | -41.85 |
attribute | NC_GLOBAL | standard_name_vocabulary | String | CF Standard Name Table v55 |
attribute | NC_GLOBAL | subsetVariables | String | latitude,longitude |
attribute | NC_GLOBAL | summary | String | Calculated power from the oxidation of necromass that is produced in marine sediment on a global scale. |
attribute | NC_GLOBAL | title | String | [global] - Calculated power from the oxidation of necromass that is produced in marine sediment on a global scale. (Develop a 1D biogeochemical-evolutionary model for deep sediments) |
attribute | NC_GLOBAL | version | String | 1 |
attribute | NC_GLOBAL | Westernmost_Easting | double | -153.1 |
attribute | NC_GLOBAL | xml_source | String | osprey2erddap.update_xml() v1.3 |
variable | Depth_below_SWI | float | ||
attribute | Depth_below_SWI | _FillValue | float | NaN |
attribute | Depth_below_SWI | actual_range | float | 0.05, 10000.0 |
attribute | Depth_below_SWI | bcodmo_name | String | depth_bsf |
attribute | Depth_below_SWI | colorBarMaximum | double | 8000.0 |
attribute | Depth_below_SWI | colorBarMinimum | double | -8000.0 |
attribute | Depth_below_SWI | colorBarPalette | String | TopographyDepth |
attribute | Depth_below_SWI | description | String | depth below sea water interface |
attribute | Depth_below_SWI | long_name | String | Depth |
attribute | Depth_below_SWI | standard_name | String | depth |
attribute | Depth_below_SWI | units | String | meters (m) |
variable | Sediment_Age | double | ||
attribute | Sediment_Age | _FillValue | double | NaN |
attribute | Sediment_Age | actual_range | double | 462.17362763238, 2.82732657601158E8 |
attribute | Sediment_Age | bcodmo_name | String | age |
attribute | Sediment_Age | description | String | sediment age |
attribute | Sediment_Age | long_name | String | Sediment Age |
attribute | Sediment_Age | units | String | years |
variable | Power_law_cells | double | ||
attribute | Power_law_cells | _FillValue | double | NaN |
attribute | Power_law_cells | actual_range | double | 138626.800354014, 7.28683970818064E8 |
attribute | Power_law_cells | bcodmo_name | String | unknown |
attribute | Power_law_cells | description | String | power law cells |
attribute | Power_law_cells | long_name | String | Power Law Cells |
attribute | Power_law_cells | units | String | cells per centimeter cubed (cells/cm3) |
variable | Necromas | double | ||
attribute | Necromas | _FillValue | double | NaN |
attribute | Necromas | actual_range | double | 3.1526348649E-4, 1013763.16258113 |
attribute | Necromas | bcodmo_name | String | unknown |
attribute | Necromas | description | String | Necromass |
attribute | Necromas | long_name | String | Necromas |
attribute | Necromas | units | String | cells per centimeter cubed per year (cells/cm3/yr) |
variable | Death_rate | double | ||
attribute | Death_rate | _FillValue | double | NaN |
attribute | Death_rate | actual_range | double | 2.27419E-9, 0.00139122473278 |
attribute | Death_rate | bcodmo_name | String | unknown |
attribute | Death_rate | description | String | death rate |
attribute | Death_rate | long_name | String | Death Rate |
attribute | Death_rate | units | String | per year (yr-1) |
variable | Power_cell_size_small | double | ||
attribute | Power_cell_size_small | _FillValue | double | NaN |
attribute | Power_cell_size_small | actual_range | double | 6.210748741E-5, 199713.209907403 |
attribute | Power_cell_size_small | bcodmo_name | String | unknown |
attribute | Power_cell_size_small | description | String | Power available from necromass oxidation. Temp: 21.1 C; Electron acceptor: oxygen; Power cell size small |
attribute | Power_cell_size_small | long_name | String | Power Cell Size Small |
attribute | Power_cell_size_small | units | String | nanoJoules per year (nJ/yr) |
variable | Power_cell_size_medium | double | ||
attribute | Power_cell_size_medium | _FillValue | double | NaN |
attribute | Power_cell_size_medium | actual_range | double | 1.7406804778E-4, 559734.260984443 |
attribute | Power_cell_size_medium | bcodmo_name | String | unknown |
attribute | Power_cell_size_medium | description | String | Power available from necromass oxidation. Temp: 21.1 C; Electron acceptor: oxygen; Power cell size medium |
attribute | Power_cell_size_medium | long_name | String | Power Cell Size Medium |
attribute | Power_cell_size_medium | units | String | nanoJoules per year (nJ/yr) |
variable | Power_cell_size_large | double | ||
attribute | Power_cell_size_large | _FillValue | double | NaN |
attribute | Power_cell_size_large | actual_range | double | 9.3396652324E-4, 3003268.36733566 |
attribute | Power_cell_size_large | bcodmo_name | String | unknown |
attribute | Power_cell_size_large | description | String | Power available from necromass oxidation. Temp: 21.1 C; Electron acceptor: oxygen; Power cell size large |
attribute | Power_cell_size_large | long_name | String | Power Cell Size Large |
attribute | Power_cell_size_large | units | String | nanoJoules per year (nJ/yr) |
variable | latitude | double | ||
attribute | latitude | _CoordinateAxisType | String | Lat |
attribute | latitude | _FillValue | double | NaN |
attribute | latitude | actual_range | double | -41.85, -41.85 |
attribute | latitude | axis | String | Y |
attribute | latitude | bcodmo_name | String | latitude |
attribute | latitude | colorBarMaximum | double | 90.0 |
attribute | latitude | colorBarMinimum | double | -90.0 |
attribute | latitude | description | String | latitude with negative values indicating South |
attribute | latitude | ioos_category | String | Location |
attribute | latitude | long_name | String | Latitude |
attribute | latitude | nerc_identifier | String | https://vocab.nerc.ac.uk/collection/P09/current/LATX/ |
attribute | latitude | standard_name | String | latitude |
attribute | latitude | units | String | degrees_north |
variable | longitude | double | ||
attribute | longitude | _CoordinateAxisType | String | Lon |
attribute | longitude | _FillValue | double | NaN |
attribute | longitude | actual_range | double | -153.1, -153.1 |
attribute | longitude | axis | String | X |
attribute | longitude | bcodmo_name | String | longitude |
attribute | longitude | colorBarMaximum | double | 180.0 |
attribute | longitude | colorBarMinimum | double | -180.0 |
attribute | longitude | description | String | longitude with negative values indicating West |
attribute | longitude | ioos_category | String | Location |
attribute | longitude | long_name | String | Longitude |
attribute | longitude | nerc_identifier | String | https://vocab.nerc.ac.uk/collection/P09/current/LONX/ |
attribute | longitude | standard_name | String | longitude |
attribute | longitude | units | String | degrees_east |
The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.