ERDDAP > info > bcodmo_dataset_785930

Grid DAP Data	Sub- set	Table DAP Data	Make A Graph	W M S	Source Data Files	Acces- sible	Title	Sum- mary	FGDC, ISO, Metadata	Back- ground Info	RSS	E mail	Institution	Dataset ID
		data	graph		files	public	[Blue Crab Samples] - Dates and locations of Callinectes blue crab samples from the coastal Atlantic waters of north and south America, Gulf of Mexico and Caribbean from Massachusetts to Uruguay from 2017 to 2021 (Collaborative research: Variation in life history and connectivity as drivers of pathogen-host dynamics and genetic structure in a trans-hemispheric pathosystem)		F   I   M	background			BCO-DMO	bcodmo_dataset_785930

The Dataset's Variables and Attributes

Row Type	Variable Name	Attribute Name	Data Type	Value
attribute	NC_GLOBAL	access_formats	String	.htmlTable,.csv,.json,.mat,.nc,.tsv,.esriCsv,.geoJson
attribute	NC_GLOBAL	acquisition_description	String	""
attribute	NC_GLOBAL	awards_0_award_nid	String	739620
attribute	NC_GLOBAL	awards_0_award_number	String	OCE-1658466
attribute	NC_GLOBAL	awards_0_data_url	String	http://www.nsf.gov/awardsearch/showAward.do?AwardNumber=1658466
attribute	NC_GLOBAL	awards_0_funder_name	String	NSF Division of Ocean Sciences
attribute	NC_GLOBAL	awards_0_funding_acronym	String	NSF OCE
attribute	NC_GLOBAL	awards_0_funding_source_nid	String	355
attribute	NC_GLOBAL	awards_0_program_manager	String	Daniel Thornhill
attribute	NC_GLOBAL	awards_0_program_manager_nid	String	722161
attribute	NC_GLOBAL	awards_1_award_nid	String	739627
attribute	NC_GLOBAL	awards_1_award_number	String	OCE-1658396
attribute	NC_GLOBAL	awards_1_data_url	String	http://www.nsf.gov/awardsearch/showAward.do?AwardNumber=1658396
attribute	NC_GLOBAL	awards_1_funder_name	String	NSF Division of Ocean Sciences
attribute	NC_GLOBAL	awards_1_funding_acronym	String	NSF OCE
attribute	NC_GLOBAL	awards_1_funding_source_nid	String	355
attribute	NC_GLOBAL	awards_1_program_manager	String	Daniel Thornhill
attribute	NC_GLOBAL	awards_1_program_manager_nid	String	722161
attribute	NC_GLOBAL	awards_2_award_nid	String	739631
attribute	NC_GLOBAL	awards_2_award_number	String	OCE-1658389
attribute	NC_GLOBAL	awards_2_data_url	String	http://www.nsf.gov/awardsearch/showAward.do?AwardNumber=1658389
attribute	NC_GLOBAL	awards_2_funder_name	String	NSF Division of Ocean Sciences
attribute	NC_GLOBAL	awards_2_funding_acronym	String	NSF OCE
attribute	NC_GLOBAL	awards_2_funding_source_nid	String	355
attribute	NC_GLOBAL	awards_2_program_manager	String	Daniel Thornhill
attribute	NC_GLOBAL	awards_2_program_manager_nid	String	722161
attribute	NC_GLOBAL	cdm_data_type	String	Other
attribute	NC_GLOBAL	comment	String	Dates and locations of Callinectes blue crab samples from the coastal Atlantic waters of north and south America, Gulf of Mexico and Caribbean from Massachusetts to Uruguay from 2017 through 2019 PI: Eric Schott Version: 2020-01-16
attribute	NC_GLOBAL	Conventions	String	COARDS, CF-1.6, ACDD-1.3
attribute	NC_GLOBAL	creator_email	String	info at bco-dmo.org
attribute	NC_GLOBAL	creator_name	String	BCO-DMO
attribute	NC_GLOBAL	creator_type	String	institution
attribute	NC_GLOBAL	creator_url	String	https://www.bco-dmo.org/
attribute	NC_GLOBAL	data_source	String	extract_data_as_tsv version 2.3 19 Dec 2019
attribute	NC_GLOBAL	date_created	String	2020-01-06T15:26:49Z
attribute	NC_GLOBAL	date_modified	String	2020-01-16T16:06:37Z
attribute	NC_GLOBAL	defaultDataQuery	String	&time<now
attribute	NC_GLOBAL	doi	String	10.1575/1912/bco-dmo.785930.1
attribute	NC_GLOBAL	Easternmost_Easting	double	-36.5267
attribute	NC_GLOBAL	geospatial_lat_max	double	41.5317
attribute	NC_GLOBAL	geospatial_lat_min	double	-34.6285
attribute	NC_GLOBAL	geospatial_lat_units	String	degrees_north
attribute	NC_GLOBAL	geospatial_lon_max	double	-36.5267
attribute	NC_GLOBAL	geospatial_lon_min	double	-97.199
attribute	NC_GLOBAL	geospatial_lon_units	String	degrees_east
attribute	NC_GLOBAL	infoUrl	String	https://www.bco-dmo.org/dataset/785930
attribute	NC_GLOBAL	institution	String	BCO-DMO
attribute	NC_GLOBAL	keywords	String	bco, bco-dmo, biological, chemical, collaborator, collection, Collection_method, data, dataset, dmo, erddap, geo, Geo_location_name, identifier, info, lat_lon, latitude, longitude, management, method, month, month_and_year, name, oceanography, office, permitting, Permitting_info, preliminary, project, Project_Identifier, sample, sample_ID, Sample_size, size, year
attribute	NC_GLOBAL	license	String	https://www.bco-dmo.org/dataset/785930/license
attribute	NC_GLOBAL	metadata_source	String	https://www.bco-dmo.org/api/dataset/785930
attribute	NC_GLOBAL	Northernmost_Northing	double	41.5317
attribute	NC_GLOBAL	param_mapping	String	{'785930': {'Latitude': 'flag - latitude', 'Longitude': 'flag - longitude'}}
attribute	NC_GLOBAL	parameter_source	String	https://www.bco-dmo.org/mapserver/dataset/785930/parameters
attribute	NC_GLOBAL	people_0_affiliation	String	University of Maryland Center for Environmental Science
attribute	NC_GLOBAL	people_0_affiliation_acronym	String	UMCES/IMET
attribute	NC_GLOBAL	people_0_person_name	String	Eric Schott
attribute	NC_GLOBAL	people_0_person_nid	String	739623
attribute	NC_GLOBAL	people_0_role	String	Principal Investigator
attribute	NC_GLOBAL	people_0_role_type	String	originator
attribute	NC_GLOBAL	people_1_affiliation	String	University of Florida
attribute	NC_GLOBAL	people_1_affiliation_acronym	String	UF
attribute	NC_GLOBAL	people_1_person_name	String	Donald Behringer
attribute	NC_GLOBAL	people_1_person_nid	String	472641
attribute	NC_GLOBAL	people_1_role	String	Co-Principal Investigator
attribute	NC_GLOBAL	people_1_role_type	String	originator
attribute	NC_GLOBAL	people_2_affiliation	String	Shedd Aquarium
attribute	NC_GLOBAL	people_2_person_name	String	Andrew Kough
attribute	NC_GLOBAL	people_2_person_nid	String	739633
attribute	NC_GLOBAL	people_2_role	String	Co-Principal Investigator
attribute	NC_GLOBAL	people_2_role_type	String	originator
attribute	NC_GLOBAL	people_3_affiliation	String	University of Maryland Center for Environmental Science
attribute	NC_GLOBAL	people_3_affiliation_acronym	String	UMCES/HPL
attribute	NC_GLOBAL	people_3_person_name	String	Dr Louis V. Plough
attribute	NC_GLOBAL	people_3_person_nid	String	627831
attribute	NC_GLOBAL	people_3_role	String	Co-Principal Investigator
attribute	NC_GLOBAL	people_3_role_type	String	originator
attribute	NC_GLOBAL	people_4_affiliation	String	Woods Hole Oceanographic Institution
attribute	NC_GLOBAL	people_4_affiliation_acronym	String	WHOI BCO-DMO
attribute	NC_GLOBAL	people_4_person_name	String	Mathew Biddle
attribute	NC_GLOBAL	people_4_person_nid	String	708682
attribute	NC_GLOBAL	people_4_role	String	BCO-DMO Data Manager
attribute	NC_GLOBAL	people_4_role_type	String	related
attribute	NC_GLOBAL	project	String	Blue Crab Connectivity
attribute	NC_GLOBAL	projects_0_acronym	String	Blue Crab Connectivity
attribute	NC_GLOBAL	projects_0_description	String	NSF Award Abstract: Marine invertebrates use an array of strategies to survive, move, and reproduce across diverse and dynamic environmental conditions. This project investigates the intersection of these strategies and how they facilitate the persistence of blue crabs and a pathogenic virus along the Atlantic coast of North and South America. The widespread distribution of this crab-virus system makes it useful for investigating host-pathogen interactions. Blue crabs can reduce their activity level and induce winter dormancy in colder climates, but it is unclear how this alters progression and transmission of the pathogen. Conversely, year-round growth and reproduction of tropical blue crabs may be offset by higher pathogen abundance and activity. This project will use a combination of field and laboratory studies to reveal how crab life history and pathogen dynamics interact and adapt at the extremes of their range. Genetic sequencing, crab movement tracking and oceanographic models will be used to understand how crab-disease dynamics vary across temperate and tropical latitudes. The blue crab is an ecologically and economically important species and knowledge generated in this project will help provide management guidance to support sustainable fisheries. Best practices to avoid and limit disease will be communicated to commercial and artisanal harvesters through partnerships and workshops. Local high school and undergraduate students from underrepresented groups will be engaged through a variety of formal and informal educational programs. Public outreach will be implemented through a museum partnership with the Shedd Aquarium and will include the training of a science communication intern. This collaborative project will combine empirical field and laboratory experiments, population genomics, and biophysical modeling to explore the consequences of latitude-driven changes in life history and oceanic connectivity on a trans-hemispheric pathosystem comprised of the blue crab, Callinectes sapidus, and the pathogenic virus, CsRV1. The virulence of the CsRV1 virus from tropical and temperate latitudes and the impact of overwintering will be studied by experimental virus challenges of crabs transplanted between high and low latitudes. The impact of infection and virulence on crab movement will be investigated in laboratory raceway experiments of healthy and infected crabs and in the field with acoustically tagged crabs deployed in temperate and tropical locations. Population genetic studies using thousands of genome-wide RAD sequencing markers for crabs and whole-genome sequencing for the virus will define genetic connectivity of crab and virus populations across their range, and will investigate the possible latitudinal, seascape, and life history-driven changes in blue crab and virus genomes. The two population genomic data sets are expected to provide different inferences and scales of connectivity because CsRV1 virus genotypes are transmitted only among post-larval crabs while blue crab genotypes also move by a potentially long-range dispersive larval stage. Finally, integrated biophysical models will be used to investigate the relative contributions of adult and larval dispersal on the population structure of the crab and the pathogen across a broad swath of habitat between New England and Argentina with a decade of simulations. An open-source Lagrangian stochastic model will estimate pelagic larval transport, and spatially explicit biased-correlated random walk models will estimate adult movement. Models will be informed by experimentally-derived movement and behavior data, as well as information on crab larval and adult behavior and overwintering duration available in the published literature. Under a series of scenarios in which crab behavior is affected by latitude and virus infection, statistical comparisons will be made between biophysical model-based predictions of connectivity and genetic estimates of connectivity. These analyses will advance our understanding of the physical, environmental, and biological factors that shape the dynamics of the blue crab CsRV1 pathosystem.
attribute	NC_GLOBAL	projects_0_end_date	String	2020-06
attribute	NC_GLOBAL	projects_0_geolocation	String	Atlantic coast of north and south America from Massachusetts to Southern Brazil, Caribbean
attribute	NC_GLOBAL	projects_0_name	String	Collaborative research: Variation in life history and connectivity as drivers of pathogen-host dynamics and genetic structure in a trans-hemispheric pathosystem
attribute	NC_GLOBAL	projects_0_project_nid	String	739621
attribute	NC_GLOBAL	projects_0_start_date	String	2017-07
attribute	NC_GLOBAL	publisher_name	String	Biological and Chemical Oceanographic Data Management Office (BCO-DMO)
attribute	NC_GLOBAL	publisher_type	String	institution
attribute	NC_GLOBAL	sourceUrl	String	(local files)
attribute	NC_GLOBAL	Southernmost_Northing	double	-34.6285
attribute	NC_GLOBAL	standard_name_vocabulary	String	CF Standard Name Table v55
attribute	NC_GLOBAL	summary	String	Dates and locations of Callinectes blue crab samples from the coastal Atlantic waters of north and south America, Gulf of Mexico and Caribbean from Massachusetts to Uruguay from 2017 through 2019. Crab populations sampled using methods available to collaborating scientists, managers, and fishermen, as listed in the table.
attribute	NC_GLOBAL	title	String	[Blue Crab Samples] - Dates and locations of Callinectes blue crab samples from the coastal Atlantic waters of north and south America, Gulf of Mexico and Caribbean from Massachusetts to Uruguay from 2017 to 2021 (Collaborative research: Variation in life history and connectivity as drivers of pathogen-host dynamics and genetic structure in a trans-hemispheric pathosystem)
attribute	NC_GLOBAL	version	String	1
attribute	NC_GLOBAL	Westernmost_Easting	double	-97.199
attribute	NC_GLOBAL	xml_source	String	osprey2erddap.update_xml() v1.3
variable	sample_ID		String
attribute	sample_ID	bcodmo_name	String	sample
attribute	sample_ID	description	String	unique identifier with place and year
attribute	sample_ID	long_name	String	Sample ID
attribute	sample_ID	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P02/current/ACYC/
attribute	sample_ID	units	String	unitless
variable	Project_Identifier		String
attribute	Project_Identifier	bcodmo_name	String	project
attribute	Project_Identifier	description	String	identifier for the project
attribute	Project_Identifier	long_name	String	Project Identifier
attribute	Project_Identifier	units	String	unitless
variable	Geo_location_name		String
attribute	Geo_location_name	bcodmo_name	String	site
attribute	Geo_location_name	description	String	State or water body
attribute	Geo_location_name	long_name	String	Geo Location Name
attribute	Geo_location_name	units	String	unitless
variable	lat_lon		String
attribute	lat_lon	bcodmo_name	String	site
attribute	lat_lon	description	String	approximate lat and lon within 10km
attribute	lat_lon	long_name	String	Latitude
attribute	lat_lon	standard_name	String	latitude
attribute	lat_lon	units	String	unitless
variable	month_and_year		String
attribute	month_and_year	bcodmo_name	String	sample_descrip
attribute	month_and_year	description	String	Collection month and year; higher resolution dates are presented in yyyy-mm-dd format
attribute	month_and_year	long_name	String	Month And Year
attribute	month_and_year	units	String	unitless
variable	Collaborator		String
attribute	Collaborator	bcodmo_name	String	unknown
attribute	Collaborator	description	String	collaborating scientists; managers; and fishermen
attribute	Collaborator	long_name	String	Collaborator
attribute	Collaborator	units	String	unitless
variable	Permitting_info		String
attribute	Permitting_info	bcodmo_name	String	sample_descrip
attribute	Permitting_info	description	String	Authority under which collection is made
attribute	Permitting_info	long_name	String	Permitting Info
attribute	Permitting_info	units	String	unitless
variable	Collection_method		String
attribute	Collection_method	bcodmo_name	String	sample_descrip
attribute	Collection_method	description	String	capture method
attribute	Collection_method	long_name	String	Collection Method
attribute	Collection_method	units	String	unitless
variable	Sample_size		short
attribute	Sample_size	_FillValue	short	32767
attribute	Sample_size	actual_range	short	15, 209
attribute	Sample_size	bcodmo_name	String	sample_descrip
attribute	Sample_size	description	String	number of crabs in the collection
attribute	Sample_size	long_name	String	Sample Size
attribute	Sample_size	units	String	unitless
variable	latitude		double
attribute	latitude	_CoordinateAxisType	String	Lat
attribute	latitude	_FillValue	double	NaN
attribute	latitude	actual_range	double	-34.6285, 41.5317
attribute	latitude	axis	String	Y
attribute	latitude	bcodmo_name	String	latitude
attribute	latitude	colorBarMaximum	double	90.0
attribute	latitude	colorBarMinimum	double	-90.0
attribute	latitude	description	String	latitude with negative values indicating South
attribute	latitude	ioos_category	String	Location
attribute	latitude	long_name	String	Latitude
attribute	latitude	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P09/current/LATX/
attribute	latitude	standard_name	String	latitude
attribute	latitude	units	String	degrees_north
variable	longitude		double
attribute	longitude	_CoordinateAxisType	String	Lon
attribute	longitude	_FillValue	double	NaN
attribute	longitude	actual_range	double	-97.199, -36.5267
attribute	longitude	axis	String	X
attribute	longitude	bcodmo_name	String	longitude
attribute	longitude	colorBarMaximum	double	180.0
attribute	longitude	colorBarMinimum	double	-180.0
attribute	longitude	description	String	longitude with negative values indicating West
attribute	longitude	ioos_category	String	Location
attribute	longitude	long_name	String	Longitude
attribute	longitude	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P09/current/LONX/
attribute	longitude	standard_name	String	longitude
attribute	longitude	units	String	degrees_east

The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.