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Grid DAP Data | Sub- set | Table DAP Data | Make A Graph | W M S | Source Data Files | Acces- sible | Title | Sum- mary | FGDC, ISO, Metadata | Back- ground Info | RSS | E | Institution | Dataset ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
data | graph | files | public | [Imaging Pulse Amplitude Modulator Fluorometer 2017] - Imaging pulse amplitude modulator fluorometer data collected from Acropora cervicornis under different pH and temperature treatments from experiments at Summerland Key, Florida from July to September 2017 (CAREER: Applying phenotypic variability to identify resilient Acropora cervicornis genotypes in the Florida Keys) | I M | background | BCO-DMO | bcodmo_dataset_811896 |
Row Type | Variable Name | Attribute Name | Data Type | Value |
---|---|---|---|---|
attribute | NC_GLOBAL | access_formats | String | .htmlTable,.csv,.json,.mat,.nc,.tsv |
attribute | NC_GLOBAL | acquisition_description | String | Corals from different treatment scenarios were IPAMed every month for the duration of the two-month long experiment. All fragments were subjected to a light curve where the initial pulse represents the max Yield after dark acclimation and the subsequent electron transport rate (ETR) values are recorded after the corals were exposed to increasing light intensities over time.\u00a0 |
attribute | NC_GLOBAL | awards_0_award_nid | String | 642851 |
attribute | NC_GLOBAL | awards_0_award_number | String | OCE-1452538 |
attribute | NC_GLOBAL | awards_0_data_url | String | http://www.nsf.gov/awardsearch/showAward?AWD_ID=1452538&HistoricalAwards=false |
attribute | NC_GLOBAL | awards_0_funder_name | String | NSF Division of Ocean Sciences |
attribute | NC_GLOBAL | awards_0_funding_acronym | String | NSF OCE |
attribute | NC_GLOBAL | awards_0_funding_source_nid | String | 355 |
attribute | NC_GLOBAL | awards_0_program_manager | String | Michael E. Sieracki |
attribute | NC_GLOBAL | awards_0_program_manager_nid | String | 50446 |
attribute | NC_GLOBAL | cdm_data_type | String | Other |
attribute | NC_GLOBAL | comment | String | IPAM 2017 PI: Erinn Muller (MOTE) Version date: 2020-05-19 |
attribute | NC_GLOBAL | Conventions | String | COARDS, CF-1.6, ACDD-1.3 |
attribute | NC_GLOBAL | creator_email | String | info at bco-dmo.org |
attribute | NC_GLOBAL | creator_name | String | BCO-DMO |
attribute | NC_GLOBAL | creator_type | String | institution |
attribute | NC_GLOBAL | creator_url | String | https://www.bco-dmo.org/ |
attribute | NC_GLOBAL | data_source | String | extract_data_as_tsv version 2.3 19 Dec 2019 |
attribute | NC_GLOBAL | dataset_current_state | String | Final and no updates |
attribute | NC_GLOBAL | date_created | String | 2020-05-19T20:17:23Z |
attribute | NC_GLOBAL | date_modified | String | 2020-05-20T13:29:32Z |
attribute | NC_GLOBAL | defaultDataQuery | String | &time<now |
attribute | NC_GLOBAL | doi | String | 10.26008/1912/bco-dmo.811896.1 |
attribute | NC_GLOBAL | infoUrl | String | https://www.bco-dmo.org/dataset/811896 |
attribute | NC_GLOBAL | institution | String | BCO-DMO |
attribute | NC_GLOBAL | instruments_0_acronym | String | Fluorometer |
attribute | NC_GLOBAL | instruments_0_dataset_instrument_nid | String | 811904 |
attribute | NC_GLOBAL | instruments_0_description | String | A fluorometer or fluorimeter is a device used to measure parameters of fluorescence: its intensity and wavelength distribution of emission spectrum after excitation by a certain spectrum of light. The instrument is designed to measure the amount of stimulated electromagnetic radiation produced by pulses of electromagnetic radiation emitted into a water sample or in situ. |
attribute | NC_GLOBAL | instruments_0_instrument_external_identifier | String | https://vocab.nerc.ac.uk/collection/L05/current/113/ |
attribute | NC_GLOBAL | instruments_0_instrument_name | String | Fluorometer |
attribute | NC_GLOBAL | instruments_0_instrument_nid | String | 484 |
attribute | NC_GLOBAL | instruments_0_supplied_name | String | Imaging pulse amplitude modulator (IPAM) fluorometer |
attribute | NC_GLOBAL | keywords | String | alpha, bco, bco-dmo, biological, chemical, data, dataset, dmo, erddap, etr, genotype, management, mETR, mYield, oceanography, office, preliminary, tank, Temp, temperature, yield |
attribute | NC_GLOBAL | license | String | https://www.bco-dmo.org/dataset/811896/license |
attribute | NC_GLOBAL | metadata_source | String | https://www.bco-dmo.org/api/dataset/811896 |
attribute | NC_GLOBAL | param_mapping | String | {'811896': {}} |
attribute | NC_GLOBAL | parameter_source | String | https://www.bco-dmo.org/mapserver/dataset/811896/parameters |
attribute | NC_GLOBAL | people_0_affiliation | String | Mote Marine Laboratory |
attribute | NC_GLOBAL | people_0_affiliation_acronym | String | Mote |
attribute | NC_GLOBAL | people_0_person_name | String | Erinn Muller |
attribute | NC_GLOBAL | people_0_person_nid | String | 642853 |
attribute | NC_GLOBAL | people_0_role | String | Principal Investigator |
attribute | NC_GLOBAL | people_0_role_type | String | originator |
attribute | NC_GLOBAL | people_1_affiliation | String | Woods Hole Oceanographic Institution |
attribute | NC_GLOBAL | people_1_affiliation_acronym | String | WHOI BCO-DMO |
attribute | NC_GLOBAL | people_1_person_name | String | Shannon Rauch |
attribute | NC_GLOBAL | people_1_person_nid | String | 51498 |
attribute | NC_GLOBAL | people_1_role | String | BCO-DMO Data Manager |
attribute | NC_GLOBAL | people_1_role_type | String | related |
attribute | NC_GLOBAL | project | String | Resilient Acerv |
attribute | NC_GLOBAL | projects_0_acronym | String | Resilient Acerv |
attribute | NC_GLOBAL | projects_0_description | String | Caribbean staghorn coral was one of the most common corals within reefs of the Florida Keys several decades ago. Over the last 40 years disease, bleaching, overfishing and habitat degradation caused a 95% reduction of the population. Staghorn coral is now listed as threatened under the U.S. Endangered Species Act of 1973. Within the past few years, millions of dollars have been invested for the purpose of restoring the population of staghorn coral within Florida and the U.S. Virgin Islands. Significant effort has been placed on maintaining and propagating corals of known genotypes within coral nurseries for the purpose of outplanting. However, little is known about the individual genotypes that are currently being outplanted from nurseries onto coral reefs. Are the genotypes being used for outplanting resilient enough to survive the three major stressors affecting the population in the Florida Keys: disease, high water temperatures, and ocean acidification? The research within the present study will be the first step in answering this critically important question. The funded project will additionally develop a research-based afterschool program with K-12 students in the Florida Keys and U.S. Virgin Islands that emphasizes an inquiry-based curriculum, STEM research activities, and peer-to-peer mentoring. The information from the present study will help scientists predict the likelihood of species persistence within the lower Florida Keys under future climate-change and ocean-acidification scenarios. Results of this research will also help guide restoration efforts throughout Florida and the Caribbean, and lead to more informative, science-based restoration activities. Acropora cervicornis dominated shallow-water reefs within the Florida Keys for at least the last half a million years, but the population has recently declined due to multiple stressors. Understanding the current population level of resilience to three major threats - disease outbreaks, high water temperatures, and ocean acidification conditions - is critical for the preservation of this threatened species. Results from the present study will answer the primary research question: will representative genotypes from the lower Florida Keys provide enough phenotypic variation for this threatened species to survive in the future? The present proposal will couple controlled laboratory challenge experiments with field data and modeling applications, and collaborate with local educators to fulfill five objectives: 1) identify A. cervicornis genotypes resistant to disease, 2) identify A. cervicornis genotypes resilient to high water temperature and ocean acidification conditions, 3) quantify how high water temperature and ocean acidification conditions impact disease dynamics on A. cervicornis; 4) determine tradeoffs in life-history traits because of resilience factors; and 5) apply a trait-based model, which will predict genotypic structure of a population under different environmental scenarios. |
attribute | NC_GLOBAL | projects_0_end_date | String | 2020-05 |
attribute | NC_GLOBAL | projects_0_geolocation | String | Florida Keys, Summerland Key, FL 24.563595°, -81.278572° |
attribute | NC_GLOBAL | projects_0_name | String | CAREER: Applying phenotypic variability to identify resilient Acropora cervicornis genotypes in the Florida Keys |
attribute | NC_GLOBAL | projects_0_project_nid | String | 642850 |
attribute | NC_GLOBAL | projects_0_start_date | String | 2015-04 |
attribute | NC_GLOBAL | publisher_name | String | Biological and Chemical Oceanographic Data Management Office (BCO-DMO) |
attribute | NC_GLOBAL | publisher_type | String | institution |
attribute | NC_GLOBAL | sourceUrl | String | (local files) |
attribute | NC_GLOBAL | standard_name_vocabulary | String | CF Standard Name Table v55 |
attribute | NC_GLOBAL | summary | String | Imaging pulse amplitude modulator fluorometer data collected from Acropora cervicornis under different pH and temperature treatments from experiments at Summerland Key, Florida (24.6616,-81.4538) from July to September 2017. |
attribute | NC_GLOBAL | title | String | [Imaging Pulse Amplitude Modulator Fluorometer 2017] - Imaging pulse amplitude modulator fluorometer data collected from Acropora cervicornis under different pH and temperature treatments from experiments at Summerland Key, Florida from July to September 2017 (CAREER: Applying phenotypic variability to identify resilient Acropora cervicornis genotypes in the Florida Keys) |
attribute | NC_GLOBAL | version | String | 1 |
attribute | NC_GLOBAL | xml_source | String | osprey2erddap.update_xml() v1.5 |
variable | Tank | byte | ||
attribute | Tank | _FillValue | byte | 127 |
attribute | Tank | actual_range | byte | 11, 30 |
attribute | Tank | bcodmo_name | String | tank |
attribute | Tank | description | String | identifies the tank number that held the particular coral fragment |
attribute | Tank | long_name | String | Tank |
attribute | Tank | units | String | unitless |
variable | Genotype | byte | ||
attribute | Genotype | _FillValue | byte | 127 |
attribute | Genotype | actual_range | byte | 1, 63 |
attribute | Genotype | bcodmo_name | String | sample_type |
attribute | Genotype | description | String | identifies the genotype number of the coral animal for each fragment |
attribute | Genotype | long_name | String | Genotype |
attribute | Genotype | units | String | unitless |
variable | pH | String | ||
attribute | pH | bcodmo_name | String | treatment |
attribute | pH | description | String | identifies the treatment pH level: Ambient = 8.1 pH; High CO2 = 7.7 pH |
attribute | pH | long_name | String | pH |
attribute | pH | units | String | unitless |
variable | Temp | String | ||
attribute | Temp | bcodmo_name | String | treatment |
attribute | Temp | description | String | identifies the treatment temperature level: High = 31.5C; Ambient = 27C |
attribute | Temp | long_name | String | Temperature |
attribute | Temp | units | String | unitless |
variable | mYield | double | ||
attribute | mYield | _FillValue | double | NaN |
attribute | mYield | actual_range | double | -0.224, 0.208 |
attribute | mYield | bcodmo_name | String | photosynthesis |
attribute | mYield | description | String | change in photosynthetic yield between July and September 2017 after dark acclimation (unitless, but represents the proportion of electrons being used for photosynthesis, potential values range from 0 - 1) |
attribute | mYield | long_name | String | M Yield |
attribute | mYield | units | String | unitless |
variable | mETR | double | ||
attribute | mETR | _FillValue | double | NaN |
attribute | mETR | actual_range | double | -32.8, 78.3 |
attribute | mETR | bcodmo_name | String | unknown |
attribute | mETR | description | String | change in the maximum level of electron transport rate between July and September 2017 |
attribute | mETR | long_name | String | M ETR |
attribute | mETR | units | String | umol electrons m–2 s–1 |
variable | alpha | double | ||
attribute | alpha | _FillValue | double | NaN |
attribute | alpha | actual_range | double | -0.07585516923637, 0.04935088369232 |
attribute | alpha | bcodmo_name | String | alpha |
attribute | alpha | description | String | change in the slope of the electron transport rate between July and September 2017; units represent the change in ETR (umol electrons m–2 s–1 ) over increasing values of PAR |
attribute | alpha | long_name | String | Alpha |
attribute | alpha | units | String | change in ETR over increasing values of PAR |
The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.