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Title Sum-
Institution Dataset ID
     data   graph     files  public Biological data (net calcification and production) from in-situ flume experiments to
manipulate pCO2 on shallow tropical coral reef communities at UCB Gump Research Station
Moorea, French Polynesia in May of 2018
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The Dataset's Variables and Attributes

Row Type Variable Name Attribute Name Data Type Value
attribute NC_GLOBAL access_formats String .htmlTable,.csv,.json,.mat,.nc,.tsv
attribute NC_GLOBAL acquisition_description String NCC was measured using the alkalinity anomaly method (after Smith (1973), and
community NCP was measured using changes in dissolved oxygen (DO).
Measurements of community NCC and NCP for daytime (n = 3 per day) and
nighttime (n = 1 per day), for each flume across three full days.

The full methodology can be found in Srednick et al. (2020).
attribute NC_GLOBAL awards_0_award_nid String 536317
attribute NC_GLOBAL awards_0_award_number String OCE-1415268
attribute NC_GLOBAL awards_0_data_url String http://www.nsf.gov/awardsearch/showAward.do?AwardNumber=1415268 (external link)
attribute NC_GLOBAL awards_0_funder_name String NSF Division of Ocean Sciences
attribute NC_GLOBAL awards_0_funding_acronym String NSF OCE
attribute NC_GLOBAL awards_0_funding_source_nid String 355
attribute NC_GLOBAL awards_0_program_manager String David L. Garrison
attribute NC_GLOBAL awards_0_program_manager_nid String 50534
attribute NC_GLOBAL awards_1_award_nid String 734980
attribute NC_GLOBAL awards_1_award_number String OCE-1637396
attribute NC_GLOBAL awards_1_data_url String https://www.nsf.gov/awardsearch/showAward?AWD_ID=1637396 (external link)
attribute NC_GLOBAL awards_1_funder_name String NSF Division of Ocean Sciences
attribute NC_GLOBAL awards_1_funding_acronym String NSF OCE
attribute NC_GLOBAL awards_1_funding_source_nid String 355
attribute NC_GLOBAL awards_1_program_manager String David L. Garrison
attribute NC_GLOBAL awards_1_program_manager_nid String 50534
attribute NC_GLOBAL cdm_data_type String Other
attribute NC_GLOBAL comment String Srednick et al. 2020 - L&O Methods - Biological
PI: Robert Carpenter
Data Version 1: 2020-05-27
attribute NC_GLOBAL Conventions String COARDS, CF-1.6, ACDD-1.3
attribute NC_GLOBAL creator_email String info at bco-dmo.org
attribute NC_GLOBAL creator_name String BCO-DMO
attribute NC_GLOBAL creator_type String institution
attribute NC_GLOBAL creator_url String https://www.bco-dmo.org/ (external link)
attribute NC_GLOBAL data_source String extract_data_as_tsv version 2.3 19 Dec 2019
attribute NC_GLOBAL dataset_current_state String Final and no updates
attribute NC_GLOBAL date_created String 2020-05-26T19:58:33Z
attribute NC_GLOBAL date_modified String 2020-06-12T19:40:19Z
attribute NC_GLOBAL defaultDataQuery String &time<now
attribute NC_GLOBAL doi String 10.26008/1912/bco-dmo.812909.1
attribute NC_GLOBAL infoUrl String https://www.bco-dmo.org/dataset/812909 (external link)
attribute NC_GLOBAL institution String BCO-DMO
attribute NC_GLOBAL keywords String bco, bco-dmo, biological, chemical, data, dataset, date, dmo, erddap, flume, management, ncc, ncp, oceanography, office, period, preliminary, sampling, Sampling_Period, time
attribute NC_GLOBAL license String https://www.bco-dmo.org/dataset/812909/license (external link)
attribute NC_GLOBAL metadata_source String https://www.bco-dmo.org/api/dataset/812909 (external link)
attribute NC_GLOBAL param_mapping String {'812909': {}}
attribute NC_GLOBAL parameter_source String https://www.bco-dmo.org/mapserver/dataset/812909/parameters (external link)
attribute NC_GLOBAL people_0_affiliation String California State University Northridge
attribute NC_GLOBAL people_0_affiliation_acronym String CSU-Northridge
attribute NC_GLOBAL people_0_person_name String Robert Carpenter
attribute NC_GLOBAL people_0_person_nid String 51535
attribute NC_GLOBAL people_0_role String Principal Investigator
attribute NC_GLOBAL people_0_role_type String originator
attribute NC_GLOBAL people_1_affiliation String California State University Northridge
attribute NC_GLOBAL people_1_affiliation_acronym String CSU-Northridge
attribute NC_GLOBAL people_1_person_name String Peter J. Edmunds
attribute NC_GLOBAL people_1_person_nid String 51536
attribute NC_GLOBAL people_1_role String Co-Principal Investigator
attribute NC_GLOBAL people_1_role_type String originator
attribute NC_GLOBAL people_2_affiliation String California State University Northridge
attribute NC_GLOBAL people_2_affiliation_acronym String CSU-Northridge
attribute NC_GLOBAL people_2_person_name String Griffin Srednick
attribute NC_GLOBAL people_2_person_nid String 737324
attribute NC_GLOBAL people_2_role String Technician
attribute NC_GLOBAL people_2_role_type String related
attribute NC_GLOBAL people_3_affiliation String Woods Hole Oceanographic Institution
attribute NC_GLOBAL people_3_affiliation_acronym String WHOI BCO-DMO
attribute NC_GLOBAL people_3_person_name String Amber D. York
attribute NC_GLOBAL people_3_person_nid String 643627
attribute NC_GLOBAL people_3_role String BCO-DMO Data Manager
attribute NC_GLOBAL people_3_role_type String related
attribute NC_GLOBAL project String MCR LTER,OA coral adaptation
attribute NC_GLOBAL projects_0_acronym String MCR LTER
attribute NC_GLOBAL projects_0_description String From http://www.lternet.edu/sites/mcr/ and http://mcr.lternet.edu/:
The Moorea Coral Reef LTER site encompasses the coral reef complex that surrounds the island of Moorea, French Polynesia (17°30'S, 149°50'W). Moorea is a small, triangular volcanic island 20 km west of Tahiti in the Society Islands of French Polynesia. An offshore barrier reef forms a system of shallow (mean depth ~ 5-7 m), narrow (~0.8-1.5 km wide) lagoons around the 60 km perimeter of Moorea. All major coral reef types (e.g., fringing reef, lagoon patch reefs, back reef, barrier reef and fore reef) are present and accessible by small boat.
The MCR LTER was established in 2004 by the US National Science Foundation (NSF) and is a partnership between the University of California Santa Barbara and California State University, Northridge. MCR researchers include marine scientists from the UC Santa Barbara, CSU Northridge, UC Davis, UC Santa Cruz, UC San Diego, CSU San Marcos, Duke University and the University of Hawaii. Field operations are conducted from the UC Berkeley Richard B. Gump South Pacific Research Station on the island of Moorea, French Polynesia.
MCR LTER Data: The Moorea Coral Reef (MCR) LTER data are managed by and available directly from the MCR project data site URL shown above.  The datasets listed below were collected at or near the MCR LTER sampling locations, and funded by NSF OCE as ancillary projects related to the MCR LTER core research themes.
The following publications and data resulted from this project:
2012 Edmunds PJ. Effect of pCO2 on the growth, respiration, and photophysiology of massive Porites spp. in Moorea, French Polynesia. Marine Biology 159: 2149-2160. doi:10.1594/PANGAEA.820375Porites growth_respiration_photophysDownload complete data for this publication (Excel file)
attribute NC_GLOBAL projects_0_geolocation String Island of Moorea, French Polynesia
attribute NC_GLOBAL projects_0_name String Moorea Coral Reef Long-Term Ecological Research site
attribute NC_GLOBAL projects_0_project_nid String 2222
attribute NC_GLOBAL projects_0_project_website String http://mcr.lternet.edu/ (external link)
attribute NC_GLOBAL projects_0_start_date String 2004-09
attribute NC_GLOBAL projects_1_acronym String OA coral adaptation
attribute NC_GLOBAL projects_1_description String Extracted from the NSF award abstract:
This project focuses on the most serious threat to marine ecosystems, Ocean Acidification (OA), and addresses the problem in the most diverse and beautiful ecosystem on the planet, coral reefs. The research utilizes Moorea, French Polynesia as a model system, and builds from the NSF investment in the Moorea Coral Reef Long Term Ecological Research Site (LTER) to exploit physical and biological monitoring of coral reefs as a context for a program of studies focused on the ways in which OA will affect corals, calcified algae, and coral reef ecosystems. The project builds on a four-year NSF award with research in five new directions: (1) experiments of year-long duration, (2) studies of coral reefs to 20-m depth, (3) experiments in which carbon dioxide will be administered to plots of coral reef underwater, (4) measurements of the capacity of coral reef organisms to change through evolutionary and induced responses to improve their resistance to OA, and (5) application of emerging theories to couple studies of individual organisms to studies of whole coral reefs. Broader impacts will accrue through a better understanding of the ways in which OA will affect coral reefs that are the poster child for demonstrating climate change effects in the marine environment, and which provide income, food, and coastal protection to millions of people living in coastal areas, including in the United States. 
This project focuses on the effects of Ocean Acidification on tropical coral reefs and builds on a program of research results from an existing 4-year award, and closely interfaces with the technical, hardware, and information infrastructure provided through the Moorea Coral Reef (MCR) LTER. The MCR-LTER, provides an unparalleled opportunity to partner with a study of OA effects on a coral reef with a location that arguably is better instrumented and studied in more ecological detail than any other coral reef in the world. Therefore, the results can be both contextualized by a high degree of ecological and physical relevance, and readily integrated into emerging theory seeking to predict the structure and function of coral reefs in warmer and more acidic future oceans. The existing award has involved a program of study in Moorea that has focused mostly on short-term organismic and ecological responses of corals and calcified algae, experiments conducted in mesocosms and flumes, and measurements of reef-scale calcification. This new award involves three new technical advances: for the first time, experiments will be conducted of year-long duration in replicate outdoor flumes; CO2 treatments will be administered to fully intact reef ecosystems in situ using replicated underwater flumes; and replicated common garden cultivation techniques will be used to explore within-species genetic variation in the response to OA conditions. Together, these tools will be used to support research on corals and calcified algae in three thematic areas: (1) tests for long-term (1 year) effects of OA on growth, performance, and fitness, (2) tests for depth-dependent effects of OA on reef communities at 20-m depth where light regimes are attenuated compared to shallow water, and (3) tests for beneficial responses to OA through intrinsic, within-species genetic variability and phenotypic plasticity. Some of the key experiments in these thematic areas will be designed to exploit integral projection models (IPMs) to couple organism with community responses, and to support the use of the metabolic theory of ecology (MTE) to address scale-dependence of OA effects on coral reef organisms and the function of the communities they build.
The following publications and data resulted from this project:
Comeau S, Carpenter RC, Lantz CA, Edmunds PJ. (2016) Parameterization of the response of calcification to temperature and pCO2 in the coral Acropora pulchra and the alga Lithophyllum kotschyanum. Coral Reefs 2016. DOI 10.1007/s00338-016-1425-0.calcification rates (2014)calcification rates (2010)
Comeau, S., Carpenter, R.C., Edmunds, P.J.  (2016) Effects of pCO2 on photosynthesis and respiration of tropical scleractinian corals and calcified algae. ICES Journal of Marine Science doi:10.1093/icesjms/fsv267.respiration and photosynthesis Irespiration and photosynthesis II
Evensen, N.R. & Edmunds P. J. (2016) Interactive effects of ocean acidification and neighboring corals on the growth of Pocillopora verrucosa. Marine Biology, 163:148. doi: 10.1007/s00227-016-2921-zcoral growthseawater chemistrycoral colony interactions
attribute NC_GLOBAL projects_1_end_date String 2018-12
attribute NC_GLOBAL projects_1_geolocation String Moorea, French Polynesia
attribute NC_GLOBAL projects_1_name String Collaborative Research: Ocean Acidification and Coral Reefs: Scale Dependence and Adaptive Capacity
attribute NC_GLOBAL projects_1_project_nid String 535322
attribute NC_GLOBAL projects_1_project_website String http://mcr.lternet.edu (external link)
attribute NC_GLOBAL projects_1_start_date String 2015-01
attribute NC_GLOBAL publisher_name String Biological and Chemical Oceanographic Data Management Office (BCO-DMO)
attribute NC_GLOBAL publisher_type String institution
attribute NC_GLOBAL sourceUrl String (local files)
attribute NC_GLOBAL standard_name_vocabulary String CF Standard Name Table v55
attribute NC_GLOBAL summary String Biological data (net calcification and production) from in-situ flume experiments to manipulate pCO2 on shallow tropical coral reef communities at UCB Gump Research Station Moorea, French Polynesia in May of 2018. These data are for a proof of trial experiment for the Shallow COral REef Free Ocean Carbon Enrichment (SCORE FOCE), outlined in Srednick et al. (2020).
attribute NC_GLOBAL title String Biological data (net calcification and production) from in-situ flume experiments to manipulate pCO2 on shallow tropical coral reef communities at UCB Gump Research Station Moorea, French Polynesia in May of 2018
attribute NC_GLOBAL version String 1
attribute NC_GLOBAL xml_source String osprey2erddap.update_xml() v1.5
variable Date   String  
attribute Date bcodmo_name String date_local
attribute Date description String Local Date (Tahiti, UTC-10) in ISO 8601 format yyyy-mm-dd
attribute Date long_name String Date
attribute Date source_name String Date
attribute Date time_precision String 1970-01-01
attribute Date units String untiless
variable Flume   byte  
attribute Flume _FillValue byte 127
attribute Flume actual_range byte 1, 2
attribute Flume bcodmo_name String tank
attribute Flume description String Flume number
attribute Flume long_name String Flume
attribute Flume units String unitless
variable Sampling_Period   String  
attribute Sampling_Period bcodmo_name String site_descrip
attribute Sampling_Period description String Time of incubation (D= Day,A = Afternoon,N=Night,M=Morning)
attribute Sampling_Period long_name String Sampling Period
attribute Sampling_Period units String unitless
variable NCC   double  
attribute NCC _FillValue double NaN
attribute NCC actual_range double -3.449566418664, 8.47747310387189
attribute NCC bcodmo_name String calcification
attribute NCC description String Net calcification (Gnet) for incubation period
attribute NCC long_name String NCC
attribute NCC units String mmol CaCO3 m-2 h-1
variable NCP   double  
attribute NCP _FillValue double NaN
attribute NCP actual_range double -30.21635936, 55.33686512
attribute NCP bcodmo_name String production
attribute NCP description String Net production (Pnet) for incubation period
attribute NCP long_name String NCP
attribute NCP units String mmol O2 m-2 h-1

The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.

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